Rmu_sc0003594.1_g000002

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003594.1
OG0013421
Physical Location & Seq
Reverse (-)
5432 .. 9633
4202 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3234 bp
atggctcatcttttcagggagctctcactgggccattcgaagagaggaggggcccactccaccaccggcagcgcccccgcgctgacgatacctacgaagccgaccaccatggccgcggatctcccgtccccattgggccagctctcggcccagctcaccgattcggagctccggctcaccgcctacgagatcttcgtcgccgcctgccgaacctcaaccggcaaagccctgactttcgtctcttcttcgctctccgactcgccgactcagcagcacaccaacggcgccgccagctcccccaatggctcgccggcgctgcagagatcgctcacctccgccgccgccagcaagatgaagaaggcattgggcctcaaatcgccgggttcttcttccgggtcgaagaagagccccgggtccgggtccgggtcggggcccggaaagcccaagcgggctatgacggtgggggagctgatgaggatccaaatggggatttctgaagctatggactcgagagtcaggagagctctgcttagaatctcagctggacaggtaggacggcgaattgagtcggttgtagtcccactggagctgttacagcagctcaagtcgtctgattttactgacccgcaagaacacgaagaatggcagaaaagaacccttaagattcttgaggctggtctacttttgcatccctttgtgccgctagacaagtccaatagcgctgcacagcggctacgacagattattcatggagcgttggacaggccctttgaaacggggagaaataatgagtccatgcaggttcttcgtagtgctgttacggctcttgcttccaggtcatctgatggcttatatgatacgtcccactgggcagatgggttaccattgaacctccgcatttatgaaatgcttctccaagccgtgtttgataatcacgatgagacatctgtaatagaggaagtggacgagctaatggagcatattaagaagacctggtcaatcctcggacttaatcagatgctccacaacctttgctttacatgggttttgtttaaccgttttgttgctaccggccaagttgaattggacctgttgtatgctgctgatacgcagctagccgaggttgctaaagatgcaaaggcaacaaaggatcccgagtactgcaagatcttgagttcgacattgacttcaatattgggttgggcagagaagagactcctagcctatcatgacacttttgatagcagtaatattgataccatgcaggccattgtttctctgggagtagtagcagctaagattctagttgaagacatatcaaatgagtatcgcaggaggagaaaaaatgaagttgacgttgctcgcaacaggattgacacttacattagatcatcattacgcactgcttttgctcagatgatggagaaggcagattccagcaggagagcatcaagaaaccagccaaacccccttcccgtgctggccatccttgcaaaggatgttggtgagctggcagttaaggagaagcagttgttcagtccaatactaaagatatggcatccttttgctgccggtgtggctgtggcaactcttcatgcttgctatgcgaatgaaattaaacagttcatatcgggtatagcggagttgacaccggatgctgtacaagttttgagagctgcagataagctggagaaagatcttgtgctcatagcagttgaggattctgtggacagtgatgatggtggcaaggcaataattcgtgagatgcctccttatgaggctgaagctgcaattgcaaatctggtaaaagtgtggatcaagacaagagtggacagacttaaagaatgggttgataggaatctgcaacaagaggagtggaatccaccagcaagtgaagatggatatgctccatctgctgttgaagttttgcgaattttcgatgaaactctggttgcattctttcagctgccaataccaatgcatcctgcattgcttcctgacttgatggctggccttgatagatgtcttcaatattacgtaaccaagacaaaatctggatgtggatcacgtaatacatttgttcccactatgcctgcattaaccagatgcactatggaatcaaagttccaaggttttggcaaaaagaaagaaaaaacaccaacttctcagaagaggaactctcaggttgcaacagttaatggggataactctttcgggataccacagttgctttgtcgcataaacacattgcagagaatccggagtgagttagaagttttggagaaacggattgttactcatctgaggaattctgaatctgctcatgtagaagacttttcgaatggattggggaaaaagtttgagctctctcctgcggcttgtgtggaggtaatcacacaactttgtgaggcagtagcttataaaatggtcttccatgacctcagtcacgttctgtgggatggtttgtatgttggagaaccatcatcttctagaatagagccttttcttgacgagctggagaagaacttacttatcgtatcaaatacagtgcatgaaagagtacgtacacgcattattactgacataatgagagcttcctttgatggtttcttgctggttttgcttgccggaggcccctctcgtgtattctcccggaaggattctcaaataatagaagatgacttcaagtcccttaaagatctgttctgggccaatggggatggcttgccttctgaattgatagataagtttacaactacagttagaggtgtacttccccttttcagaactgatactgagagtctcatagaacggtttagacgtgtgaccttggagtcatatggctcttctgccaggtccagactccctttaccccctacttccgggcagtggaatccaactgaaccaaacacactcctccgtgtgttgtgcaatagaaatgatgaagcagcttctaagtttcttaagaagacttataatttgcccaagaaactaagattcttggcgacttggacagtgcttgtatttagtgaaggttacccccctggtgagatgctcgtcatttcattcatctgtgagcaggaggggaaggacgtttgccataggaagtggtcagtgaccttgtatagtaaattgttcaaggatttggataatccagcggtcactcagtttggagcagatgaatctaagaggccggagacttccatacactttcttatgaggaatgattattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

1077

Amino Acids

119.71

Weight (kDa)

8.06

Isoelectric Point (pI)

46.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 598 - 997 5.8e-173 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013421)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25800
fragaria_vesca FvH4_2g35590 FvH4_2g35590
malus_domestica MD08G1113600.v1.1 MD15G1093300.v1.1
prunus_persica Prupe.1G448100_v2.0.a1
pyrus_communis pycom08g09420 pycom15g08610
rosa_chinensis RchiOBHm_Chr6g0306221
rosa_laevigata RLG00000010812
rosa_multiflora Rmu_sc0003594.1_g000002
rosa_roxburghii Rroxscaffold_7G00161920
rosa_rugosa Rorug06G0348100
rosa_samantha Rh6AG460700 Rh6BG440700 Rh6CG474700 Rh6DG461000
rosa_wichuraiana Rw6G040130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2421, 2976
AasI GACNNNNNNGTC 2 cut(s) 512, 2833
Acc36I ACCTGC 1 cut(s) 790
AccB1I GGYRCC 1 cut(s) 284
AccI GTMKAC 1 cut(s) 679
AccII CGCG 2 cut(s) 80, 116
AccIII TCCGGA 1 cut(s) 2259
AclWI GGATC 7 cut(s) 126, 472, 485, 1145, 1158, 1823, 2071
AcoI YGGCCR 3 cut(s) 111, 1072, 1482
AcsI RAATTY 2 cut(s) 1932, 2308
AcuI CTGAAG 2 cut(s) 516, 1803
AcyI GRCGYC 1 cut(s) 285
AfaI GTAC 5 cut(s) 1160, 1662, 2562, 2566, 2772
AfeI AGCGCT 1 cut(s) 721
AfiI CCNNNNNNNGG 8 cut(s) 145, 416, 417, 423, 429, 1495, 2882, 2889
AflII CTTAAG 2 cut(s) 659, 2963
AflIII ACRYGT 1 cut(s) 2821
AgsI TTSAA 9 cut(s) 773, 889, 1082, 1191, 1310, 1922, 2030, 2686, 3139
AhdI GACNNNNNGTC 1 cut(s) 2686
AjiI CACGTC 1 cut(s) 2822
AjnI CCWGG 4 cut(s) 833, 992, 2852, 3043
AjuI GAANNNNNNNTTGG 2 cut(s) 347, 379
AloI GAACNNNNNNTCC 2 cut(s) 2108, 2140
Alw21I GWGCWC 5 cut(s) 24, 171, 526, 1707, 2367
Alw26I GTCTC 5 cut(s) 244, 935, 1207, 2807, 3191
AlwI GGATC 7 cut(s) 126, 472, 485, 1145, 1158, 1823, 2071
Ama87I CYCGRG 3 cut(s) 410, 508, 1154
Aor13HI TCCGGA 1 cut(s) 2259
Aor51HI AGCGCT 1 cut(s) 721
ApaI GGGCCC 2 cut(s) 55, 435
ApoI RAATTY 2 cut(s) 1932, 2308
ArsI GACNNNNNNTTYG 4 cut(s) 752, 784, 2962, 2994
Asp700I GAANNNNTTC 1 cut(s) 909
AspLEI GCGC 5 cut(s) 74, 82, 287, 316, 722
AsuC2I CCSGG 9 cut(s) 381, 394, 411, 412, 418, 424, 435, 2653, 2884
AsuHPI GGTGA 5 cut(s) 148, 169, 322, 1517, 3059
AsuII TTCGAA 2 cut(s) 38, 2339
AsuNHI GCTAGC 1 cut(s) 1114
AvaI CYCGRG 3 cut(s) 410, 508, 1154
AvaII GGWCC 4 cut(s) 414, 420, 1087, 2856
BaeGI GKGCMC 2 cut(s) 55, 435
BaeI ACNNNNGTAYC 2 cut(s) 2210, 2243
BalI TGGCCA 1 cut(s) 1484
BamHI GGATCC 2 cut(s) 477, 1150
BanI GGYRCC 1 cut(s) 284
BanII GRGCYC 7 cut(s) 24, 55, 171, 410, 435, 526, 2367
BauI CACGAG 1 cut(s) 2640
BbsI GAAGAC 6 cut(s) 995, 1317, 2018, 2337, 2422, 2975
Bbv12I GWGCWC 5 cut(s) 24, 171, 526, 1707, 2367
BceAI ACGGC 4 cut(s) 298, 572, 837, 905
BcgI CGANNNNNNTGC 2 cut(s) 788, 822
BciT130I CCWGG 4 cut(s) 835, 994, 2854, 3045
BciVI GTATCC 1 cut(s) 2211
BcnI CCSGG 9 cut(s) 381, 394, 411, 412, 418, 424, 435, 2653, 2884
BcoDI GTCTC 5 cut(s) 244, 935, 1207, 2807, 3191
BfaI CTAG 5 cut(s) 704, 1115, 1220, 1304, 2490
BfmI CTRYAG 3 cut(s) 317, 1677, 2757
BfoI RGCGCY 4 cut(s) 75, 288, 317, 723
BfrI CTTAAG 2 cut(s) 659, 2963
BfuAI ACCTGC 1 cut(s) 790
BfuI GTATCC 1 cut(s) 2211
BglI GCCNNNNNGGC 1 cut(s) 1577
BglII AGATCT 4 cut(s) 189, 1167, 1696, 2698
BmcAI AGTACT 1 cut(s) 1160
Bme18I GGWCC 4 cut(s) 414, 420, 1087, 2856
BmeRI GACNNNNNGTC 1 cut(s) 2686
BmeT110I CYCGRG 3 cut(s) 410, 508, 1154
BmgBI CACGTC 1 cut(s) 2822
BmrI ACTGGG 2 cut(s) 38, 877
BmtI GCTAGC 1 cut(s) 1118
BmuI ACTGGG 2 cut(s) 38, 877
BoxI GACNNNNGTC 2 cut(s) 236, 2442
BpiI GAAGAC 6 cut(s) 995, 1317, 2018, 2337, 2422, 2975
BplI GAGNNNNNCTC 2 cut(s) 2164, 2196
BpmI CTGGAG 3 cut(s) 605, 1709, 2537
Bpu14I TTCGAA 2 cut(s) 38, 2339
BpuEI CTTGAG 3 cut(s) 587, 689, 1192
BpuMI CCSGG 9 cut(s) 381, 394, 411, 412, 418, 424, 435, 2653, 2884
BsaAI YACGTR 3 cut(s) 2038, 2069, 2564
BsaBI GATNNNNATC 3 cut(s) 476, 1857, 2062
BsaHI GRCGYC 1 cut(s) 285
BsaJI CCNNGG 9 cut(s) 108, 114, 409, 410, 1003, 1119, 2128, 2829, 3043
BsaWI WCCGGW 2 cut(s) 1651, 2259
BsaXI ACNNNNNCTCC 2 cut(s) 1514, 1544
Bsc4I CCNNNNNNNGG 8 cut(s) 145, 416, 417, 423, 429, 1495, 2882, 2889
Bse118I RCCGGY 5 cut(s) 65, 218, 310, 1070, 1571
Bse1I ACTGG 3 cut(s) 33, 588, 872
Bse3DI GCAATG 2 cut(s) 1988, 2246
Bse8I GATNNNNATC 3 cut(s) 476, 1857, 2062
BseAI TCCGGA 1 cut(s) 2259
BseBI CCWGG 4 cut(s) 835, 994, 2854, 3045
BseDI CCNNGG 9 cut(s) 108, 114, 409, 410, 1003, 1119, 2128, 2829, 3043
BseGI GGATG 9 cut(s) 688, 1485, 1504, 1558, 1660, 1981, 2063, 2464, 2725
BseJI GATNNNNATC 3 cut(s) 476, 1857, 2062
BseLI CCNNNNNNNGG 8 cut(s) 145, 416, 417, 423, 429, 1495, 2882, 2889
BseMI GCAATG 2 cut(s) 1988, 2246
BseMII CTCAG 9 cut(s) 281, 552, 1427, 2180, 2195, 2294, 2455, 2787, 3179
BseNI ACTGG 3 cut(s) 33, 588, 872
BseRI GAGGAG 4 cut(s) 60, 1351, 1886, 2906
BseSI GKGCMC 2 cut(s) 55, 435
BseYI CCCAGC 1 cut(s) 150
BsgI GTGCAG 1 cut(s) 708
Bsh1236I CGCG 2 cut(s) 80, 116
BshNI GGYRCC 1 cut(s) 284
BsiHKAI GWGCWC 5 cut(s) 24, 171, 526, 1707, 2367
BsiHKCI CYCGRG 3 cut(s) 410, 508, 1154
BslFI GGGAC 4 cut(s) 112, 563, 847, 2674
BslI CCNNNNNNNGG 8 cut(s) 145, 416, 417, 423, 429, 1495, 2882, 2889
BsmAI GTCTC 5 cut(s) 244, 935, 1207, 2807, 3191
BsmBI CGTCTC 1 cut(s) 244
BsmFI GGGAC 4 cut(s) 112, 563, 847, 2674
BsmI GAATGC 1 cut(s) 1955
BsoBI CYCGRG 3 cut(s) 410, 508, 1154
Bsp119I TTCGAA 2 cut(s) 38, 2339
Bsp120I GGGCCC 2 cut(s) 51, 431
Bsp1286I GDGCHC 8 cut(s) 24, 55, 171, 410, 435, 526, 1707, 2367
Bsp13I TCCGGA 1 cut(s) 2259
Bsp1407I TGTACA 1 cut(s) 1660
Bsp19I CCATGG 1 cut(s) 108
BspCNI CTCAG 9 cut(s) 280, 551, 1426, 2179, 2194, 2295, 2454, 2788, 3178
BspEI TCCGGA 1 cut(s) 2259
BspFNI CGCG 2 cut(s) 80, 116
BspHI TCATGA 1 cut(s) 1228
BspMAI CTGCAG 2 cut(s) 321, 1681
BspMI ACCTGC 1 cut(s) 790
BspOI GCTAGC 1 cut(s) 1118
BspPI GGATC 7 cut(s) 126, 472, 485, 1145, 1158, 1823, 2071
BspQI GCTCTTC 2 cut(s) 398, 2851
BspT104I TTCGAA 2 cut(s) 38, 2339
BspT107I GGYRCC 1 cut(s) 284
BspTI CTTAAG 2 cut(s) 659, 2963
BsrDI GCAATG 2 cut(s) 1988, 2246
BsrFI RCCGGY 5 cut(s) 65, 218, 310, 1070, 1571
BsrGI TGTACA 1 cut(s) 1660
BsrI ACTGG 3 cut(s) 33, 588, 872
BssAI RCCGGY 5 cut(s) 65, 218, 310, 1070, 1571
BssECI CCNNGG 9 cut(s) 108, 114, 409, 410, 1003, 1119, 2128, 2829, 3043
BssNI GRCGYC 1 cut(s) 285
BssSI CACGAG 1 cut(s) 2640
BssT1I CCWWGG 3 cut(s) 108, 2128, 2829
Bst2BI CACGAG 1 cut(s) 2640
Bst2UI CCWGG 4 cut(s) 835, 994, 2854, 3045
Bst6I CTCTTC 7 cut(s) 35, 247, 398, 1205, 1596, 2165, 2851
BstACI GRCGYC 1 cut(s) 285
BstAFI CTTAAG 2 cut(s) 659, 2963
BstAUI TGTACA 1 cut(s) 1660
BstBAI YACGTR 3 cut(s) 2038, 2069, 2564
BstBI TTCGAA 2 cut(s) 38, 2339
BstDSI CCRYGG 2 cut(s) 108, 114
BstEII GGTNACC 2 cut(s) 879, 3035
BstENI CCTNNNNNAGG 1 cut(s) 1493
BstF5I GGATG 9 cut(s) 688, 1485, 1504, 1558, 1660, 1981, 2063, 2464, 2725
BstFNI CGCG 2 cut(s) 80, 116
BstH2I RGCGCY 4 cut(s) 75, 288, 317, 723
BstHHI GCGC 5 cut(s) 74, 82, 287, 316, 722
BstMAI GTCTC 5 cut(s) 244, 935, 1207, 2807, 3191
BstNI CCWGG 4 cut(s) 835, 994, 2854, 3045
BstPAI GACNNNNGTC 2 cut(s) 236, 2442
BstPI GGTNACC 2 cut(s) 879, 3035
BstSFI CTRYAG 3 cut(s) 317, 1677, 2757
BstSLI GKGCMC 2 cut(s) 55, 435
BstSNI TACGTA 2 cut(s) 2038, 2564
BstUI CGCG 2 cut(s) 80, 116
BstV2I GAAGAC 6 cut(s) 995, 1317, 2018, 2337, 2422, 2975
BstX2I RGATCY 7 cut(s) 118, 189, 477, 1150, 1167, 1696, 2698
BstXI CCANNNNNNTGG 1 cut(s) 2135
BstYI RGATCY 7 cut(s) 118, 189, 477, 1150, 1167, 1696, 2698
BsuI GTATCC 1 cut(s) 2211
BtgI CCRYGG 2 cut(s) 108, 114
BtrI CACGTC 1 cut(s) 2822
BtsCI GGATG 9 cut(s) 688, 1485, 1504, 1558, 1660, 1981, 2063, 2464, 2725
BtsI GCAGTG 2 cut(s) 1401, 2894
BtsIMutI CAGTG 9 cut(s) 26, 581, 865, 1401, 1738, 2553, 2894, 3021, 3120
BveI ACCTGC 1 cut(s) 790
CciI TCATGA 1 cut(s) 1228
CfoI GCGC 5 cut(s) 74, 82, 287, 316, 722
Cfr10I RCCGGY 5 cut(s) 65, 218, 310, 1070, 1571
Cfr42I CCGCGG 1 cut(s) 117
Cfr9I CCCGGG 1 cut(s) 410
CsiI ACCWGGT 1 cut(s) 992
Csp6I GTAC 5 cut(s) 1159, 1661, 2561, 2565, 2771
CspCI CAANNNNNGTGG 4 cut(s) 1013, 1048, 1856, 1891
CviQI GTAC 5 cut(s) 1159, 1661, 2561, 2565, 2771
DinI GGCGCC 1 cut(s) 286
DrdI GACNNNNNNGTC 2 cut(s) 512, 2833
DriI GACNNNNNGTC 1 cut(s) 2686
DseDI GACNNNNNNGTC 2 cut(s) 512, 2833
EaeI YGGCCR 3 cut(s) 111, 1072, 1482
Eam1104I CTCTTC 7 cut(s) 35, 247, 398, 1205, 1596, 2165, 2851
Eam1105I GACNNNNNGTC 1 cut(s) 2686
EarI CTCTTC 7 cut(s) 35, 247, 398, 1205, 1596, 2165, 2851
EciI GGCGGA 1 cut(s) 325
Ecl136II GAGCTC 4 cut(s) 22, 169, 524, 2365
Eco105I TACGTA 2 cut(s) 2038, 2564
Eco130I CCWWGG 3 cut(s) 108, 2128, 2829
Eco24I GRGCYC 7 cut(s) 24, 55, 171, 410, 435, 526, 2367
Eco47I GGWCC 4 cut(s) 414, 420, 1087, 2856
Eco47III AGCGCT 1 cut(s) 721
Eco53kI GAGCTC 4 cut(s) 22, 169, 524, 2365
Eco57I CTGAAG 2 cut(s) 516, 1803
Eco88I CYCGRG 3 cut(s) 410, 508, 1154
Eco91I GGTNACC 2 cut(s) 879, 3035
EcoICRI GAGCTC 4 cut(s) 22, 169, 524, 2365
EcoNI CCTNNNNNAGG 1 cut(s) 1493
EcoO109I RGGNCCY 4 cut(s) 51, 431, 765, 2633
EcoO65I GGTNACC 2 cut(s) 879, 3035
EcoRI GAATTC 1 cut(s) 2308
EcoRII CCWGG 4 cut(s) 833, 992, 2852, 3043
EcoT14I CCWWGG 3 cut(s) 108, 2128, 2829
EcoT22I ATGCAT 1 cut(s) 1983
EcoT38I GRGCYC 7 cut(s) 24, 55, 171, 410, 435, 526, 2367
EgeI GGCGCC 1 cut(s) 286
EheI GGCGCC 1 cut(s) 286
ErhI CCWWGG 3 cut(s) 108, 2128, 2829
Esp3I CGTCTC 1 cut(s) 244
FaqI GGGAC 4 cut(s) 112, 563, 847, 2674
FauI CCCGC 3 cut(s) 85, 441, 633
FauNDI CATATG 1 cut(s) 2839
FblI GTMKAC 1 cut(s) 679
FokI GGATG 9 cut(s) 675, 1472, 1511, 1545, 1667, 1968, 2070, 2471, 2732
FriOI GRGCYC 7 cut(s) 24, 55, 171, 410, 435, 526, 2367
FspBI CTAG 5 cut(s) 704, 1115, 1220, 1304, 2490
GlaI GCGC 5 cut(s) 73, 81, 286, 315, 721
GsaI CCCAGC 1 cut(s) 154
GsuI CTGGAG 3 cut(s) 605, 1709, 2537
HaeII RGCGCY 4 cut(s) 75, 288, 317, 723
HhaI GCGC 5 cut(s) 74, 82, 287, 316, 722
Hin1I GRCGYC 1 cut(s) 285
Hin6I GCGC 5 cut(s) 72, 80, 285, 314, 720
HinP1I GCGC 5 cut(s) 72, 80, 285, 314, 720
HincII GTYRAC 2 cut(s) 1354, 1647
HindII GTYRAC 2 cut(s) 1354, 1647
HphI GGTGA 5 cut(s) 148, 169, 322, 1517, 3059
Hpy166II GTNNAC 9 cut(s) 680, 964, 1354, 1647, 1729, 1831, 2567, 2751, 2771
Hpy8I GTNNAC 9 cut(s) 680, 964, 1354, 1647, 1729, 1831, 2567, 2751, 2771
Hpy99I CGWCG 1 cut(s) 200
HpyAV CCTTC 7 cut(s) 352, 1420, 1481, 2650, 2739, 3026, 3082
HpyCH4IV ACGT 8 cut(s) 860, 1356, 2037, 2068, 2448, 2563, 2821, 3093
HpySE526I ACGT 8 cut(s) 860, 1356, 2037, 2068, 2448, 2563, 2821, 3093
Hsp92I GRCGYC 1 cut(s) 285
HspAI GCGC 5 cut(s) 72, 80, 285, 314, 720
KasI GGCGCC 1 cut(s) 284
Kpn2I TCCGGA 1 cut(s) 2259
KroI GCCGGC 1 cut(s) 310
KroNI GCCGGC 1 cut(s) 312
KspI CCGCGG 1 cut(s) 117
LguI GCTCTTC 2 cut(s) 398, 2851
MabI ACCWGGT 1 cut(s) 992
MaeI CTAG 5 cut(s) 704, 1115, 1220, 1304, 2490
MaeII ACGT 8 cut(s) 860, 1356, 2037, 2068, 2448, 2563, 2821, 3093
MfeI CAATTG 1 cut(s) 1791
MflI RGATCY 7 cut(s) 118, 189, 477, 1150, 1167, 1696, 2698
MhlI GDGCHC 8 cut(s) 24, 55, 171, 410, 435, 526, 1707, 2367
MlsI TGGCCA 1 cut(s) 1484
MluNI TGGCCA 1 cut(s) 1484
Mly113I GGCGCC 1 cut(s) 285
MmeI TCCRAC 4 cut(s) 279, 738, 2452, 2921
Mox20I TGGCCA 1 cut(s) 1484
Mph1103I ATGCAT 1 cut(s) 1983
MreI CGCCGGCG 1 cut(s) 310
MroI TCCGGA 1 cut(s) 2259
MroNI GCCGGC 1 cut(s) 310
MroXI GAANNNNTTC 1 cut(s) 909
MscI TGGCCA 1 cut(s) 1484
Msp20I TGGCCA 1 cut(s) 1484
MspA1I CMGCKG 5 cut(s) 116, 542, 730, 1966, 3158
MspCI CTTAAG 2 cut(s) 659, 2963
MunI CAATTG 1 cut(s) 1791
Mva1269I GAATGC 1 cut(s) 1955
MvaI CCWGG 4 cut(s) 835, 994, 2854, 3045
MvnI CGCG 2 cut(s) 80, 116
NaeI GCCGGC 1 cut(s) 312
NarI GGCGCC 1 cut(s) 285
NciI CCSGG 9 cut(s) 381, 394, 411, 412, 418, 424, 435, 2653, 2884
NcoI CCATGG 1 cut(s) 108
NdeI CATATG 1 cut(s) 2839
NgoMIV GCCGGC 1 cut(s) 310
NheI GCTAGC 1 cut(s) 1114
NmeAIII GCCGAG 2 cut(s) 125, 1144
NmuCI GTSAC 4 cut(s) 2444, 2824, 3115, 3160
NsiI ATGCAT 1 cut(s) 1983
NspV TTCGAA 2 cut(s) 38, 2339
PaeR7I CTCGAG 1 cut(s) 508
PagI TCATGA 1 cut(s) 1228
PciSI GCTCTTC 2 cut(s) 398, 2851
PcsI WCGNNNNNNNCGW 3 cut(s) 92, 192, 2818
PctI GAATGC 1 cut(s) 1955
PdiI GCCGGC 1 cut(s) 312
PdmI GAANNNNTTC 1 cut(s) 909
PflFI GACNNNGTC 1 cut(s) 994
PfoI TCCNGGA 1 cut(s) 2651
PluTI GGCGCC 1 cut(s) 288
Ppu21I YACGTR 3 cut(s) 2038, 2069, 2564
PshAI GACNNNNGTC 2 cut(s) 236, 2442
PsiI TTATAA 2 cut(s) 2421, 2976
Psp124BI GAGCTC 4 cut(s) 24, 171, 526, 2367
Psp6I CCWGG 4 cut(s) 833, 992, 2852, 3043
PspEI GGTNACC 2 cut(s) 879, 3035
PspFI CCCAGC 1 cut(s) 150
PspGI CCWGG 4 cut(s) 833, 992, 2852, 3043
PspOMI GGGCCC 2 cut(s) 51, 431
PstI CTGCAG 2 cut(s) 321, 1681
PsuI RGATCY 7 cut(s) 118, 189, 477, 1150, 1167, 1696, 2698
PsyI GACNNNGTC 1 cut(s) 994
PvuII CAGCTG 2 cut(s) 542, 1966
RsaI GTAC 5 cut(s) 1160, 1662, 2562, 2566, 2772
RsaNI GTAC 5 cut(s) 1159, 1661, 2561, 2565, 2771
SacI GAGCTC 4 cut(s) 24, 171, 526, 2367
SacII CCGCGG 1 cut(s) 117
SapI GCTCTTC 2 cut(s) 398, 2851
ScaI AGTACT 1 cut(s) 1160
SduI GDGCHC 8 cut(s) 24, 55, 171, 410, 435, 526, 1707, 2367
SexAI ACCWGGT 1 cut(s) 992
SfcI CTRYAG 3 cut(s) 317, 1677, 2757
SfoI GGCGCC 1 cut(s) 286
Sfr274I CTCGAG 1 cut(s) 508
Sfr303I CCGCGG 1 cut(s) 117
SfuI TTCGAA 2 cut(s) 38, 2339
SgrAI CRCCGGYG 1 cut(s) 310
SgrBI CCGCGG 1 cut(s) 117
SinI GGWCC 4 cut(s) 414, 420, 1087, 2856
SlaI CTCGAG 1 cut(s) 508
SmaI CCCGGG 1 cut(s) 412
SmlI CTYRAG 6 cut(s) 508, 602, 659, 668, 1171, 2963
SmoI CTYRAG 6 cut(s) 508, 602, 659, 668, 1171, 2963
SnaBI TACGTA 2 cut(s) 2038, 2564
SspDI GGCGCC 1 cut(s) 284
SspI AATATT 3 cut(s) 1194, 1252, 2033
SspMI CTAG 5 cut(s) 704, 1115, 1220, 1304, 2490
SstI GAGCTC 4 cut(s) 24, 171, 526, 2367
StyI CCWWGG 3 cut(s) 108, 2128, 2829
TaiI ACGT 8 cut(s) 863, 1359, 2040, 2071, 2451, 2566, 2824, 3096
TaqI TCGA 6 cut(s) 38, 398, 509, 1178, 1938, 2339
TatI WGTACW 3 cut(s) 1158, 1660, 2770
TauI GCSGC 8 cut(s) 116, 203, 290, 341, 344, 703, 733, 2378
TscAI CASTG 9 cut(s) 33, 588, 872, 1408, 1738, 2553, 2894, 3021, 3120
TseFI GTSAC 4 cut(s) 2444, 2824, 3115, 3160
Tsp45I GTSAC 4 cut(s) 2444, 2824, 3115, 3160
TspGWI ACGGA 2 cut(s) 2302, 2909
TspMI CCCGGG 1 cut(s) 410
TspRI CASTG 9 cut(s) 33, 588, 872, 1408, 1738, 2553, 2894, 3021, 3120
Tth111I GACNNNGTC 1 cut(s) 994
Vha464I CTTAAG 2 cut(s) 659, 2963
VpaK11BI GGWCC 4 cut(s) 414, 420, 1087, 2856
XagI CCTNNNNNAGG 1 cut(s) 1493
XapI RAATTY 2 cut(s) 1932, 2308
XbaI TCTAGA 1 cut(s) 2489
XcmI CCANNNNNNNNNTGG 3 cut(s) 872, 1276, 2110
XhoI CTCGAG 1 cut(s) 508
XmaI CCCGGG 1 cut(s) 410
XmiI GTMKAC 1 cut(s) 679
XmnI GAANNNNTTC 1 cut(s) 909
XspI CTAG 5 cut(s) 704, 1115, 1220, 1304, 2490
ZrmI AGTACT 1 cut(s) 1160
Zsp2I ATGCAT 1 cut(s) 1983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.