Rmu_sc0004064.1_g000019

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004064.1
OG0005705
Physical Location & Seq
Reverse (-)
77009 .. 86138
9130 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3288 bp
atggcatcgaccgacaatgagctcgaagcacagctattggaagctgggaatcaactcctggagccgccgtccaccgtcgacgacctccttcctcttctcgacagggttgaaagttgtctatcaaaggtagaacaatcaccaaacaagtcaatgcaagctgcactttcaccatcgcagaaggcgttggttgctgatcaacttttaaggcattcagatcctgatgtcaaagtttcagttgcgtcttgcatcagtgagataacaagaataacagcacctgatgcaccatatgatgatgaccaaatgaaggaggtctttcagcttattgtatcttcatttgaaaatctagatgacaagtccagtcgatcatacacaaagaggacatccattcttgaaactgttgcaaaggtcaggtcctgtgttgtaatgttggatcttgaatgcgatgcattgatcgttgagatgttccagcattttctcaaggcaataagggattatcacccagagaatgttttctcatcgatggagacaattatgacccttgttatagaagaaagtgaagacatatcttttgaacttctttctcccttattagctagtgtgaaaaatgatgatgaggacattttaccaatttctcggaagttgggggaaagagtaattgaaaactccgctattaaacttaagccccacctggcacaggaagtagaaacccatggcattgcattaggtgattacagtaaagtagtagcttcgatatgccaagagacagctggtgacactgagcagaatgaagtgcacgacgacgaagatgtggaggacaagtcaacaatccgggaatcttcggaagaggcagtccaggtggataaagaaaattccaccgcagcagtttcttctgaacaagtcgatcctgttattgatggatcctcaaaggtagttatgaataatggtggtgcagcaactggggaggatgaatgttcggctgatttgaactctttaaagaagcaagagcagggtgaagataccgaggaagtcaaaggtccaaatacatcaagtgttgctgaacctgatagtttggagactgagaaggctgttgatgcaaaacaaatgccagaagaagttagcgaggataaagataaggattctaatttgtcaacagcacaacctgcagacagtcctcaagctgataatgaggaagaaaccgaggcacttccgccccataaaagtggctctgaagatgctcccagttcacctcgtgaggttcctgatgtggaggcagctgtgccttcagaaaatgagaaaggttcggatataaatctctccactgcattggagaaggaatcaactgatgttgctcccccatccccaagtgggagccttcctgatgaaagtcgtcccaaaaaggctggacgacataagaagaaagatacttctaataaagaggctacacctgttactgatgatgaatccaaaagggcaactgatggaataagtgattcagaattaagatcaagtaagcactctgggaaaaaagtctctgctgggggttctaatgagaataaaagtcccattgtggtggatgcacctagaaaggaaagtggcactgcaagtgattcagaggtaaaacagaagtcatctaagaaggtttctactgggaattctaaggagaataatacttcagttgtggtagatgcacctagaaaggaaagtagcagcacaagtgattcagaggcaagacagaagttagctaagaaggttgatggaagcaataagactagtgatgagtcttctttgaagcagcaagaagataagaagaagcgtgcacgcagtaaagtttcttcaagaagaagctcaacaaaatcctcggccatggaagttgacaaagagatattgtcaacacccaagtcaaaatctaccaagaatgaacttccattggaggagactcctaagacaaattccaagaggaagcgtcctttggaaaaagaaaagcaatctggtgcaaaagagtttgatgacactgaggtgattggttcaaagataaaagtttggtggccggcggatcgcatgtattataaaggtgttgtccattcttttgattctgttaaaaagaagcatgtggtgaaatataatgatggagatcaggaagttttgaatcttaaaagagagaaatggctgtatgtagaaggtgactctgaatcagatggggagcaggaaaatgatgagtcgagtcacgatggctcttctgaactgcccttgaagaagaaagtgaaaagtaatcgtgatggatcaactaagaaagaaaagatggatgctacacccaaatcgggtggaggagcttcctccagcaaatcaaaaggcagaaccacaaagtctggtcgtaagcagagagacagcagtaaacctgatggcagatccaaaggtgatacatccaaggctgttggcaaaacagatgatgatcgtgttggaaaattaaaggatcaaactccaaaaagtggtggtaaatcagtggatgttgctcagaagacatccagcaaatcaaagaacaatgagtcccagacacctaagagtagcaaatccaaggaggatgatagcagcacccaaagagcttcaattaagtccaagcaagacacgcagaaggctgggaagtcaaatcaaggcacaccaaagactagtgcctccacccccaagggtaaatcctctctgagtagtagcaaagcaaatggcaaggtgaaatctgtttcaaaagctagagagagtgaggatatggaggaggactctactgattcggaaaaagcaccagaaaggaccaagggaaagtcaacaagttcatctaaggcacagggaagccagaccaaaagccctcctcctcatcctcctcggagtccaccgcttagatcaactccaactccgtcctggtggcccttcttgactagcattactccgatctggccgagctcgtcgagaaggccctgctcttgcagactctcgaagaggccgtcggtggccataactgacatcaacgtgatacttccgtcaaaaatatctgatgacgccgtctgtttgttgacgtggcaagcacgtgagtctcataagctcagtccgccgggagttgagtgcgagggacatggatttgtagtaggaattggagaggatgatggcagtgttggtgatggtttgggcagagaagaagcagaggagagggaggaaaacttcgatgctaaccttcaactcgaggctgcaacggtgacgaagctcggggcgaatgtgtcacacccaccatcgacatcaagttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1095

Amino Acids

118.5

Weight (kDa)

5.3

Isoelectric Point (pI)

52.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 27 - 232 9.4e-55 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2067
Acc36I ACCTGC 1 cut(s) 1168
AccB7I CCANNNNNTGG 1 cut(s) 2486
AccI GTMKAC 1 cut(s) 78
AciI CCGC 7 cut(s) 65, 666, 876, 1208, 2051, 2882, 3095
AclWI GGATC 9 cut(s) 209, 438, 896, 912, 925, 2061, 2287, 2400, 2478
AcoI YGGCCR 4 cut(s) 1860, 2045, 2942, 2997
AcsI RAATTY 3 cut(s) 868, 1651, 1948
AcuI CTGAAG 3 cut(s) 1248, 1266, 1656
AcvI CACGTG 1 cut(s) 3074
AcyI GRCGYC 1 cut(s) 3045
AdeI CACNNNGTG 1 cut(s) 1250
AfiI CCNNNNNNNGG 5 cut(s) 304, 694, 1365, 2318, 2486
AflII CTTAAG 1 cut(s) 677
AhlI ACTAGT 2 cut(s) 1769, 2663
AjiI CACGTC 1 cut(s) 3063
AjnI CCWGG 4 cut(s) 57, 687, 852, 2906
AjuI GAANNNNNNNTTGG 2 cut(s) 1952, 1984
AleI CACNNNNGTG 1 cut(s) 2015
AloI GAACNNNNNNTCC 2 cut(s) 2528, 2560
Alw21I GWGCWC 4 cut(s) 24, 795, 1819, 2951
Alw26I GTCTC 7 cut(s) 518, 755, 1067, 1534, 1928, 2376, 3084
Alw44I GTGCAC 2 cut(s) 791, 1815
AlwI GGATC 9 cut(s) 209, 438, 896, 912, 925, 2061, 2287, 2400, 2478
AlwNI CAGNNNCTG 4 cut(s) 218, 275, 414, 956
Ama87I CYCGRG 2 cut(s) 3224, 3248
AoxI GGCC 7 cut(s) 1860, 2045, 2912, 2942, 2960, 2987, 2997
ApaLI GTGCAC 2 cut(s) 791, 1815
ApeKI GCWGC 8 cut(s) 158, 878, 950, 1271, 1707, 1792, 2586, 3230
ApoI RAATTY 3 cut(s) 868, 1651, 1948
ArsI GACNNNNNNTTYG 6 cut(s) 395, 427, 551, 583, 2975, 3007
Asp700I GAANNNNTTC 1 cut(s) 509
AspS9I GGNCC 5 cut(s) 411, 1034, 2799, 2913, 2961
AsuC2I CCSGG 2 cut(s) 830, 3099
AvaI CYCGRG 2 cut(s) 3224, 3248
AvaII GGWCC 3 cut(s) 411, 1034, 2799
BaeGI GKGCMC 2 cut(s) 795, 1819
BaeI ACNNNNGTAYC 2 cut(s) 3011, 3044
BalI TGGCCA 1 cut(s) 2999
BamHI GGATCC 1 cut(s) 917
BanII GRGCYC 2 cut(s) 24, 2951
BarI GAAGNNNNNNTAC 2 cut(s) 1816, 1848
BauI CACGAG 1 cut(s) 1248
BbrPI CACGTG 1 cut(s) 3074
BbsI GAAGAC 3 cut(s) 564, 1773, 2522
Bbv12I GWGCWC 4 cut(s) 24, 795, 1819, 2951
BbvI GCAGC 8 cut(s) 145, 890, 962, 1283, 1719, 1804, 2598, 3217
BceAI ACGGC 3 cut(s) 52, 2974, 3032
BciT130I CCWGG 4 cut(s) 59, 689, 854, 2908
BclI TGATCA 1 cut(s) 193
BcnI CCSGG 2 cut(s) 830, 3099
BcoDI GTCTC 7 cut(s) 518, 755, 1067, 1534, 1928, 2376, 3084
BcuI ACTAGT 2 cut(s) 1769, 2663
BfaI CTAG 8 cut(s) 344, 594, 1581, 1692, 1770, 2664, 2742, 2925
BfmI CTRYAG 1 cut(s) 1161
BfrI CTTAAG 1 cut(s) 677
BfuAI ACCTGC 1 cut(s) 1168
BisI GCNGC 9 cut(s) 65, 159, 879, 951, 1272, 1708, 1793, 2587, 3231
BlsI GCNGC 9 cut(s) 66, 160, 880, 952, 1273, 1709, 1794, 2588, 3232
Bme1390I CCNGG 6 cut(s) 59, 689, 830, 854, 2908, 3099
Bme18I GGWCC 3 cut(s) 411, 1034, 2799
BmeT110I CYCGRG 2 cut(s) 3224, 3248
BmgBI CACGTC 1 cut(s) 3063
BmgT120I GGNCC 5 cut(s) 411, 1034, 2799, 2913, 2961
BmiI GGNNCC 4 cut(s) 63, 919, 1257, 1370
BmrFI CCNGG 6 cut(s) 59, 689, 830, 854, 2908, 3099
BmrI ACTGGG 3 cut(s) 966, 1233, 1656
BmuI ACTGGG 3 cut(s) 966, 1233, 1656
BpiI GAAGAC 3 cut(s) 564, 1773, 2522
BplI GAGNNNNNCTC 2 cut(s) 2753, 2785
BpmI CTGGAG 2 cut(s) 80, 2320
BpuEI CTTGAG 2 cut(s) 461, 1158
BpuMI CCSGG 2 cut(s) 830, 3099
Bsa29I ATCGAT 1 cut(s) 518
BsaAI YACGTR 1 cut(s) 3074
BsaBI GATNNNNATC 3 cut(s) 1308, 2130, 2448
BsaHI GRCGYC 1 cut(s) 3045
BsaXI ACNNNNNCTCC 6 cut(s) 53, 83, 803, 833, 2884, 2914
Bsc4I CCNNNNNNNGG 5 cut(s) 304, 694, 1365, 2318, 2486
Bse118I RCCGGY 1 cut(s) 2047
Bse1I ACTGG 4 cut(s) 357, 961, 1239, 1651
Bse3DI GCAATG 1 cut(s) 714
Bse8I GATNNNNATC 3 cut(s) 1308, 2130, 2448
BseBI CCWGG 4 cut(s) 59, 689, 854, 2908
BseCI ATCGAT 1 cut(s) 518
BseJI GATNNNNATC 3 cut(s) 1308, 2130, 2448
BseLI CCNNNNNNNGG 5 cut(s) 304, 694, 1365, 2318, 2486
BseMI GCAATG 1 cut(s) 714
BseMII CTCAG 6 cut(s) 768, 1068, 2004, 2525, 2687, 3103
BseNI ACTGG 4 cut(s) 357, 961, 1239, 1651
BseRI GAGGAG 7 cut(s) 1946, 2340, 2777, 2847, 2850, 2859, 3203
BseSI GKGCMC 2 cut(s) 795, 1819
BseXI GCAGC 8 cut(s) 145, 890, 962, 1283, 1719, 1804, 2598, 3217
BseYI CCCAGC 3 cut(s) 44, 1535, 2633
BsgI GTGCAG 2 cut(s) 144, 969
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 7 cut(s) 1862, 2047, 2914, 2944, 2962, 2989, 2999
BshVI ATCGAT 1 cut(s) 518
BsiEI CGRYCG 1 cut(s) 12
BsiHKAI GWGCWC 4 cut(s) 24, 795, 1819, 2951
BsiHKCI CYCGRG 2 cut(s) 3224, 3248
BsiSI CCGG 3 cut(s) 829, 2048, 3098
BslFI GGGAC 4 cut(s) 1374, 1545, 2530, 3129
BslI CCNNNNNNNGG 5 cut(s) 304, 694, 1365, 2318, 2486
BsmAI GTCTC 7 cut(s) 518, 755, 1067, 1534, 1928, 2376, 3084
BsmFI GGGAC 4 cut(s) 1374, 1545, 2530, 3129
BsmI GAATGC 2 cut(s) 208, 443
BsnI GGCC 7 cut(s) 1862, 2047, 2914, 2944, 2962, 2989, 2999
BsoBI CYCGRG 2 cut(s) 3224, 3248
Bsp1286I GDGCHC 4 cut(s) 24, 795, 1819, 2951
Bsp19I CCATGG 2 cut(s) 709, 1863
BspACI CCGC 7 cut(s) 65, 666, 876, 1208, 2051, 2882, 3095
BspANI GGCC 7 cut(s) 1862, 2047, 2914, 2944, 2962, 2989, 2999
BspCNI CTCAG 6 cut(s) 769, 1069, 2005, 2524, 2688, 3102
BspDI ATCGAT 1 cut(s) 518
BspLI GGNNCC 4 cut(s) 63, 919, 1257, 1370
BspMAI CTGCAG 1 cut(s) 1165
BspMI ACCTGC 1 cut(s) 1168
BspPI GGATC 9 cut(s) 209, 438, 896, 912, 925, 2061, 2287, 2400, 2478
BspQI GCTCTTC 1 cut(s) 2239
BspTI CTTAAG 1 cut(s) 677
BsrDI GCAATG 1 cut(s) 714
BsrFI RCCGGY 1 cut(s) 2047
BsrI ACTGG 4 cut(s) 357, 961, 1239, 1651
BssAI RCCGGY 1 cut(s) 2047
BssNI GRCGYC 1 cut(s) 3045
BssSI CACGAG 1 cut(s) 1248
BssT1I CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
Bst2BI CACGAG 1 cut(s) 1248
Bst2UI CCWGG 4 cut(s) 59, 689, 854, 2908
Bst4CI ACNGT 5 cut(s) 76, 397, 734, 1169, 3238
Bst6I CTCTTC 4 cut(s) 99, 837, 2239, 2978
BstACI GRCGYC 1 cut(s) 3045
BstAFI CTTAAG 1 cut(s) 677
BstAPI GCANNNNNTGC 2 cut(s) 278, 1160
BstBAI YACGTR 1 cut(s) 3074
BstC8I GCNNGC 5 cut(s) 156, 1815, 1819, 2049, 3069
BstDSI CCRYGG 2 cut(s) 709, 1863
BstENI CCTNNNNNAGG 1 cut(s) 692
BstMAI GTCTC 7 cut(s) 518, 755, 1067, 1534, 1928, 2376, 3084
BstMCI CGRYCG 1 cut(s) 12
BstMWI GCNNNNNNNGC 6 cut(s) 188, 278, 1091, 1160, 2623, 3094
BstNI CCWGG 4 cut(s) 59, 689, 854, 2908
BstNSI RCATGY 2 cut(s) 2062, 2111
BstSCI CCNGG 6 cut(s) 57, 687, 828, 852, 2906, 3097
BstSFI CTRYAG 1 cut(s) 1161
BstSLI GKGCMC 2 cut(s) 795, 1819
BstV1I GCAGC 8 cut(s) 145, 890, 962, 1283, 1719, 1804, 2598, 3217
BstV2I GAAGAC 3 cut(s) 564, 1773, 2522
BstX2I RGATCY 4 cut(s) 214, 430, 917, 2405
BstXI CCANNNNNNTGG 3 cut(s) 1220, 1324, 1570
BstYI RGATCY 4 cut(s) 214, 430, 917, 2405
Bsu15I ATCGAT 1 cut(s) 518
BsuRI GGCC 7 cut(s) 1862, 2047, 2914, 2944, 2962, 2989, 2999
BsuTUI ATCGAT 1 cut(s) 518
BtgI CCRYGG 2 cut(s) 709, 1863
BtgZI GCGATG 2 cut(s) 156, 456
BtrI CACGTC 1 cut(s) 3063
BtsI GCAGTG 3 cut(s) 1317, 1596, 3160
BtsIMutI CAGTG 7 cut(s) 256, 774, 1317, 1596, 2010, 2505, 3160
BveI ACCTGC 1 cut(s) 1168
Cac8I GCNNGC 5 cut(s) 156, 1815, 1819, 2049, 3069
CaiI CAGNNNCTG 4 cut(s) 218, 275, 414, 956
Cfr10I RCCGGY 1 cut(s) 2047
Cfr13I GGNCC 5 cut(s) 411, 1034, 2799, 2913, 2961
ClaI ATCGAT 1 cut(s) 518
CseI GACGC 3 cut(s) 228, 1952, 3053
CspCI CAANNNNNGTGG 2 cut(s) 2302, 2337
CviAII CATG 5 cut(s) 710, 1864, 2059, 2108, 3119
DraI TTTAAA 1 cut(s) 993
DraIII CACNNNGTG 1 cut(s) 1250
EaeI YGGCCR 4 cut(s) 1860, 2045, 2942, 2997
Eam1104I CTCTTC 4 cut(s) 99, 837, 2239, 2978
EarI CTCTTC 4 cut(s) 99, 837, 2239, 2978
EciI GGCGGA 3 cut(s) 1197, 2066, 3084
Ecl136II GAGCTC 2 cut(s) 22, 2949
Eco130I CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
Eco24I GRGCYC 2 cut(s) 24, 2951
Eco47I GGWCC 3 cut(s) 411, 1034, 2799
Eco53kI GAGCTC 2 cut(s) 22, 2949
Eco57I CTGAAG 3 cut(s) 1248, 1266, 1656
Eco72I CACGTG 1 cut(s) 3074
Eco88I CYCGRG 2 cut(s) 3224, 3248
EcoICRI GAGCTC 2 cut(s) 22, 2949
EcoNI CCTNNNNNAGG 1 cut(s) 692
EcoO109I RGGNCCY 2 cut(s) 411, 2961
EcoRI GAATTC 1 cut(s) 1651
EcoRII CCWGG 4 cut(s) 57, 687, 852, 2906
EcoT14I CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
EcoT22I ATGCAT 1 cut(s) 448
EcoT38I GRGCYC 2 cut(s) 24, 2951
ErhI CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
FaeI CATG 5 cut(s) 713, 1867, 2062, 2111, 3122
FalI AAGNNNNNCTT 4 cut(s) 147, 179, 296, 328
FaqI GGGAC 4 cut(s) 1374, 1545, 2530, 3129
FatI CATG 5 cut(s) 709, 1863, 2058, 2107, 3118
FauNDI CATATG 1 cut(s) 286
FbaI TGATCA 1 cut(s) 193
FblI GTMKAC 1 cut(s) 78
Fnu4HI GCNGC 9 cut(s) 65, 159, 879, 951, 1272, 1708, 1793, 2587, 3231
FriOI GRGCYC 2 cut(s) 24, 2951
Fsp4HI GCNGC 9 cut(s) 65, 159, 879, 951, 1272, 1708, 1793, 2587, 3231
FspBI CTAG 8 cut(s) 344, 594, 1581, 1692, 1770, 2664, 2742, 2925
GluI GCNGC 9 cut(s) 65, 159, 879, 951, 1272, 1708, 1793, 2587, 3231
GsaI CCCAGC 3 cut(s) 48, 1539, 2637
GsuI CTGGAG 2 cut(s) 80, 2320
HaeIII GGCC 7 cut(s) 1862, 2047, 2914, 2944, 2962, 2989, 2999
HapII CCGG 3 cut(s) 829, 2048, 3098
HgaI GACGC 3 cut(s) 228, 1952, 3053
Hin1I GRCGYC 1 cut(s) 3045
Hin1II CATG 5 cut(s) 713, 1867, 2062, 2111, 3122
HincII GTYRAC 7 cut(s) 79, 822, 1149, 1873, 1890, 2814, 3060
HindII GTYRAC 7 cut(s) 79, 822, 1149, 1873, 1890, 2814, 3060
HpaII CCGG 3 cut(s) 829, 2048, 3098
Hpy99I CGWCG 6 cut(s) 80, 83, 800, 803, 2956, 2995
HpyCH4III ACNGT 5 cut(s) 76, 397, 734, 1169, 3238
HpyCH4IV ACGT 3 cut(s) 3015, 3062, 3073
HpyF10VI GCNNNNNNNGC 6 cut(s) 188, 278, 1091, 1160, 2623, 3094
HpySE526I ACGT 3 cut(s) 3015, 3062, 3073
Hsp92I GRCGYC 1 cut(s) 3045
Hsp92II CATG 5 cut(s) 713, 1867, 2062, 2111, 3122
KroI GCCGGC 1 cut(s) 2047
KroNI GCCGGC 1 cut(s) 2049
Ksp22I TGATCA 1 cut(s) 193
LguI GCTCTTC 1 cut(s) 2239
LmnI GCTCC 6 cut(s) 61, 1240, 1354, 1368, 2200, 2327
Lsp1109I GCAGC 8 cut(s) 145, 890, 962, 1283, 1719, 1804, 2598, 3217
MaeI CTAG 8 cut(s) 344, 594, 1581, 1692, 1770, 2664, 2742, 2925
MaeII ACGT 3 cut(s) 3015, 3062, 3073
MaeIII GTNAC 6 cut(s) 770, 1447, 2180, 2222, 3238, 3261
MflI RGATCY 4 cut(s) 214, 430, 917, 2405
MhlI GDGCHC 4 cut(s) 24, 795, 1819, 2951
MlsI TGGCCA 1 cut(s) 2999
MluNI TGGCCA 1 cut(s) 2999
MmeI TCCRAC 3 cut(s) 408, 2437, 2921
Mox20I TGGCCA 1 cut(s) 2999
Mph1103I ATGCAT 1 cut(s) 448
MroNI GCCGGC 1 cut(s) 2047
MroXI GAANNNNTTC 1 cut(s) 509
MscI TGGCCA 1 cut(s) 2999
MseI TTAA 9 cut(s) 203, 672, 678, 992, 1499, 2097, 2151, 2465, 2607
MslI CAYNNNNRTG 4 cut(s) 1218, 1568, 2015, 3014
Msp20I TGGCCA 1 cut(s) 2999
MspA1I CMGCKG 2 cut(s) 767, 1274
MspCI CTTAAG 1 cut(s) 677
MspI CCGG 3 cut(s) 829, 2048, 3098
MspR9I CCNGG 6 cut(s) 59, 689, 830, 854, 2908, 3099
Mva1269I GAATGC 2 cut(s) 208, 443
MvaI CCWGG 4 cut(s) 59, 689, 854, 2908
MwoI GCNNNNNNNGC 6 cut(s) 188, 278, 1091, 1160, 2623, 3094
NaeI GCCGGC 1 cut(s) 2049
NciI CCSGG 2 cut(s) 830, 3099
NcoI CCATGG 2 cut(s) 709, 1863
NdeI CATATG 1 cut(s) 286
NgoMIV GCCGGC 1 cut(s) 2047
NlaIII CATG 5 cut(s) 713, 1867, 2062, 2111, 3122
NlaIV GGNNCC 4 cut(s) 63, 919, 1257, 1370
NmeAIII GCCGAG 2 cut(s) 1838, 2970
NmuCI GTSAC 5 cut(s) 770, 2180, 2222, 3238, 3261
NsiI ATGCAT 1 cut(s) 448
NspI RCATGY 2 cut(s) 2062, 2111
OliI CACNNNNGTG 1 cut(s) 2015
PaeR7I CTCGAG 1 cut(s) 3224
PciSI GCTCTTC 1 cut(s) 2239
PcsI WCGNNNNNNNCGW 2 cut(s) 179, 2987
PctI GAATGC 2 cut(s) 208, 443
PdiI GCCGGC 1 cut(s) 2049
PdmI GAANNNNTTC 1 cut(s) 509
PflFI GACNNNGTC 1 cut(s) 3047
PflMI CCANNNNNTGG 1 cut(s) 2486
PfoI TCCNGGA 2 cut(s) 57, 828
PkrI GCNGC 9 cut(s) 66, 160, 880, 952, 1273, 1709, 1794, 2588, 3232
PmaCI CACGTG 1 cut(s) 3074
PmlI CACGTG 1 cut(s) 3074
Ppu21I YACGTR 1 cut(s) 3074
PpuMI RGGWCCY 1 cut(s) 411
PsiI TTATAA 1 cut(s) 2067
Psp124BI GAGCTC 2 cut(s) 24, 2951
Psp5II RGGWCCY 1 cut(s) 411
Psp6I CCWGG 4 cut(s) 57, 687, 852, 2906
PspCI CACGTG 1 cut(s) 3074
PspFI CCCAGC 3 cut(s) 44, 1535, 2633
PspGI CCWGG 4 cut(s) 57, 687, 852, 2906
PspN4I GGNNCC 4 cut(s) 63, 919, 1257, 1370
PspPI GGNCC 5 cut(s) 411, 1034, 2799, 2913, 2961
PspPPI RGGWCCY 1 cut(s) 411
PspXI VCTCGAGB 1 cut(s) 3224
PstI CTGCAG 1 cut(s) 1165
PstNI CAGNNNCTG 4 cut(s) 218, 275, 414, 956
PsuI RGATCY 4 cut(s) 214, 430, 917, 2405
PsyI GACNNNGTC 1 cut(s) 3047
PvuII CAGCTG 2 cut(s) 767, 1274
RseI CAYNNNNRTG 4 cut(s) 1218, 1568, 2015, 3014
SacI GAGCTC 2 cut(s) 24, 2951
SalI GTCGAC 1 cut(s) 77
SapI GCTCTTC 1 cut(s) 2239
SaqAI TTAA 9 cut(s) 203, 672, 678, 992, 1499, 2097, 2151, 2465, 2607
SatI GCNGC 9 cut(s) 65, 159, 879, 951, 1272, 1708, 1793, 2587, 3231
Sau96I GGNCC 5 cut(s) 411, 1034, 2799, 2913, 2961
ScrFI CCNGG 6 cut(s) 59, 689, 830, 854, 2908, 3099
SduI GDGCHC 4 cut(s) 24, 795, 1819, 2951
SfcI CTRYAG 1 cut(s) 1161
Sfr274I CTCGAG 1 cut(s) 3224
SgrDI CGTCGACG 1 cut(s) 77
SinI GGWCC 3 cut(s) 411, 1034, 2799
SlaI CTCGAG 1 cut(s) 3224
SmiMI CAYNNNNRTG 4 cut(s) 1218, 1568, 2015, 3014
SmlI CTYRAG 4 cut(s) 476, 677, 1173, 3224
SmoI CTYRAG 4 cut(s) 476, 677, 1173, 3224
SpeI ACTAGT 2 cut(s) 1769, 2663
SsiI CCGC 7 cut(s) 65, 666, 876, 1208, 2051, 2882, 3095
SspMI CTAG 8 cut(s) 344, 594, 1581, 1692, 1770, 2664, 2742, 2925
SstI GAGCTC 2 cut(s) 24, 2951
StyD4I CCNGG 6 cut(s) 57, 687, 828, 852, 2906, 3097
StyI CCWWGG 6 cut(s) 709, 1863, 2424, 2571, 2679, 2802
TaaI ACNGT 5 cut(s) 76, 397, 734, 1169, 3238
TaiI ACGT 3 cut(s) 3018, 3065, 3076
TaqII GACCGA 1 cut(s) 26
TauI GCSGC 1 cut(s) 67
Tru1I TTAA 9 cut(s) 203, 672, 678, 992, 1499, 2097, 2151, 2465, 2607
Tru9I TTAA 9 cut(s) 203, 672, 678, 992, 1499, 2097, 2151, 2465, 2607
TscAI CASTG 7 cut(s) 256, 781, 1324, 1603, 2017, 2505, 3160
TseFI GTSAC 5 cut(s) 770, 2180, 2222, 3238, 3261
TseI GCWGC 8 cut(s) 158, 878, 950, 1271, 1707, 1792, 2586, 3230
Tsp45I GTSAC 5 cut(s) 770, 2180, 2222, 3238, 3261
TspDTI ATGAA 9 cut(s) 317, 321, 801, 950, 981, 1395, 1473, 1932, 2811
TspGWI ACGGA 2 cut(s) 2892, 3015
TspRI CASTG 7 cut(s) 256, 781, 1324, 1603, 2017, 2505, 3160
Tth111I GACNNNGTC 1 cut(s) 3047
Van91I CCANNNNNTGG 1 cut(s) 2486
Vha464I CTTAAG 1 cut(s) 677
VneI GTGCAC 2 cut(s) 791, 1815
VpaK11BI GGWCC 3 cut(s) 411, 1034, 2799
XagI CCTNNNNNAGG 1 cut(s) 692
XapI RAATTY 3 cut(s) 868, 1651, 1948
XbaI TCTAGA 1 cut(s) 343
XceI RCATGY 2 cut(s) 2062, 2111
XcmI CCANNNNNNNNNTGG 2 cut(s) 764, 2904
XhoI CTCGAG 1 cut(s) 3224
XmiI GTMKAC 1 cut(s) 78
XmnI GAANNNNTTC 1 cut(s) 509
XspI CTAG 8 cut(s) 344, 594, 1581, 1692, 1770, 2664, 2742, 2925
Zsp2I ATGCAT 1 cut(s) 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.