Rmu_sc0004380.1_g000005

V-type proton ATPase subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004380.1
OG0007224
Physical Location & Seq
Forward (+)
24640 .. 32471
7832 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1674 bp
atgcggactggagcggaagctgacctgggaataatcgagaaacttccttcgagcgttgacctggagtttgaccgtccgctcgaggaggaaaaccctccgatgcctaagttaatctcactcttcttcatcatcctctttgctcggtgttgctctcttcctcgtcgctccgctccagatcgaaaccaacaccagcttgcaaatatggctgtttcacaaaacaatcacgatttggaggagggaacgctagaggtcggcatggagtacagaactgtctctggtgtggctggacctctggttatccttgaaaaagttaagggacccaagtttcaggagattgttaatattcggttgggagatggaacaattcgacgtggccaagtcctggaggttgatggagagaaagctattgttcaggttttcgaaggaacatctggaattgacaacaagtataccacagtgcagtttacaggagaggtgttgaaaactccagtctctctggacatgcttgggcggatttttaatggttctgggaaacccattgacaatggccccccaattttgcctgaggcttacctagacatatctggtagttctatcaatcccagtgagagaacgtatcctgaagagatgatacagacaggaatttctacaattgatgttatgaattccattgcaagaggacaaaagatcccacttttctctgctgctggtctacctcataatgagattgcagctcagatatgtcgccaggctggtctggtcaagcggttggagaaatctgacaatcttcttgacgctggggatgtggaagacgacaacttcgccattgtgtttgctgctatgggagtaaatatggagaccgcacagttcttcaaacgtgattttgaggaaaatggttcaatggagagggtcaccctttttcttaatctggcaaatgaccctacaattgaacgtattattactcctcgtattgctctgactacggcagagtatttggcatatgaatgtgggaagcatgtccttgtcatactgacagatatgagttcttatgctgatgctcttcgtgaggtatctgctgctcgagaggaagtgcccggaaggcgtggatatcctgggtacatgtatactgatctggcacaaatctatgagcgtgctggaagaatagaagggcgaaaaggctccatcacacaaattccaattttaactatgcccaatgatgatattacacatcccaccccagatcttacgggatatatcactgagggacaggtgtacattgacaggcagctatacaacagacaggtatacccaccaatcaatgtccttccatcactttctcgtttgatgaagagtgctattggtgaagggatgactcgcaaggatcattctgatgtatccaatcagttgtatgcaaattatgcaattgggaaggatgtccaagcaatgaaagctgtggttggagaagaagctctttcttctgaggacttgctatacctggagtttttggacaagtttgagaagaaatttgtgagccaaggagcctatgatactcgtagtatcttccagtctcttgatttggcatggacattgctacgcattttccctcgtgagcttctgcaccgtatacctataaagaccctagatctgttctacagcagagatgcaacaaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001678 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005911 GO:0006355 GO:0006357 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007165 GO:0008064 GO:0008092 GO:0008150 GO:0009506 GO:0009507 GO:0009536 GO:0009743 GO:0009746 GO:0009749 GO:0009756 GO:0009757 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010182 GO:0010255 GO:0010468 GO:0010556 GO:0010639 GO:0012505 GO:0016020 GO:0016043 GO:0019219 GO:0019222 GO:0019725 GO:0022607 GO:0023052 GO:0030029 GO:0030036 GO:0030054 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031090 GO:0031323 GO:0031326 GO:0031333 GO:0032271 GO:0032272 GO:0032535 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0033500 GO:0034284 GO:0042221 GO:0042592 GO:0042593 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046686 GO:0048519 GO:0048523 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051015 GO:0051017 GO:0051128 GO:0051129 GO:0051171 GO:0051252 GO:0051493 GO:0051494 GO:0051693 GO:0051716 GO:0055044 GO:0055082 GO:0060255 GO:0061572 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071326 GO:0071331 GO:0071333 GO:0071840 GO:0071944 GO:0080090 GO:0090066 GO:0097435 GO:0098588 GO:0098805 GO:0110053 GO:1901700 GO:1901701 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04145 ko04150 ko04721 ko04966 ko05110 ko05120 ko05323 map00190 map01100 map04145 map04150 map04721 map04966 map05110 map05120 map05323
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N

Protein Analysis

557

Amino Acids

62.09

Weight (kDa)

4.98

Isoelectric Point (pI)

34.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_ab_N PF02874 91 - 157 1e-14 ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab PF00006 214 - 446 1.5e-74 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_VA_C PF22919 452 - 550 1.2e-33 C-terminal domain of V and A type ATP synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 382
AccBSI CCGCTC 3 cut(s) 14, 79, 170
AccI GTMKAC 5 cut(s) 449, 712, 1124, 1305, 1624
AciI CCGC 7 cut(s) 4, 14, 77, 168, 511, 766, 861
AclWI GGATC 2 cut(s) 682, 1389
AcoI YGGCCR 1 cut(s) 373
AcsI RAATTY 4 cut(s) 642, 664, 1191, 1523
AcuI CTGAAG 1 cut(s) 642
AfaI GTAC 3 cut(s) 263, 1118, 1274
AfiI CCNNNNNNNGG 1 cut(s) 382
AflIII ACRYGT 1 cut(s) 1119
AgsI TTSAA 5 cut(s) 305, 481, 874, 900, 950
AjiI CACGTC 1 cut(s) 371
AjnI CCWGG 6 cut(s) 24, 60, 381, 747, 1111, 1494
AluBI AGCT 8 cut(s) 20, 193, 404, 734, 1288, 1451, 1469, 1612
AluI AGCT 8 cut(s) 20, 193, 404, 734, 1288, 1451, 1469, 1612
Alw26I GTCTC 4 cut(s) 277, 496, 851, 1572
AlwI GGATC 2 cut(s) 682, 1389
Ama87I CYCGRG 2 cut(s) 80, 1080
AoxI GGCC 2 cut(s) 373, 547
ApeKI GCWGC 5 cut(s) 704, 731, 836, 1076, 1285
ApoI RAATTY 4 cut(s) 642, 664, 1191, 1523
ArsI GACNNNNNNTTYG 4 cut(s) 50, 82, 803, 835
AspS9I GGNCC 3 cut(s) 287, 317, 548
AsuC2I CCSGG 1 cut(s) 1095
AsuHPI GGTGA 2 cut(s) 904, 1373
AsuII TTCGAA 1 cut(s) 420
AvaI CYCGRG 2 cut(s) 80, 1080
AvaII GGWCC 2 cut(s) 287, 317
AxyI CCTNAGG 1 cut(s) 564
BaeGI GKGCMC 1 cut(s) 1095
BalI TGGCCA 1 cut(s) 375
BarI GAAGNNNNNNTAC 2 cut(s) 615, 647
BauI CACGAG 1 cut(s) 1605
BbsI GAAGAC 1 cut(s) 816
BbvI GCAGC 5 cut(s) 691, 743, 823, 1063, 1297
BccI CCATC 4 cut(s) 350, 386, 1190, 1336
BceAI ACGGC 1 cut(s) 999
BciT130I CCWGG 6 cut(s) 26, 62, 383, 749, 1113, 1496
BciVI GTATCC 2 cut(s) 627, 1405
BcnI CCSGG 1 cut(s) 1095
BcoDI GTCTC 4 cut(s) 277, 496, 851, 1572
BfaI CTAG 3 cut(s) 245, 575, 1640
BfmI CTRYAG 1 cut(s) 1651
BfuI GTATCC 2 cut(s) 627, 1405
BglI GCCNNNNNGGC 1 cut(s) 1099
BglII AGATCT 2 cut(s) 1240, 1642
BisI GCNGC 5 cut(s) 705, 732, 837, 1077, 1286
BlsI GCNGC 5 cut(s) 706, 733, 838, 1078, 1287
Bme1390I CCNGG 7 cut(s) 26, 62, 383, 749, 1095, 1113, 1496
Bme18I GGWCC 2 cut(s) 287, 317
BmeT110I CYCGRG 2 cut(s) 80, 1080
BmgBI CACGTC 1 cut(s) 371
BmgT120I GGNCC 3 cut(s) 287, 317, 548
BmiI GGNNCC 5 cut(s) 318, 319, 550, 1180, 1540
BmrFI CCNGG 7 cut(s) 26, 62, 383, 749, 1095, 1113, 1496
BmrI ACTGGG 1 cut(s) 597
BmsI GCATC 3 cut(s) 90, 1045, 1651
BmuI ACTGGG 1 cut(s) 597
BpiI GAAGAC 1 cut(s) 816
BpmI CTGGAG 6 cut(s) 30, 83, 156, 404, 471, 1517
Bpu14I TTCGAA 1 cut(s) 420
BpuMI CCSGG 1 cut(s) 1095
BsaI GGTCTC 1 cut(s) 851
BsaJI CCNNGG 3 cut(s) 25, 1112, 1534
Bsc4I CCNNNNNNNGG 1 cut(s) 382
Bse1I ACTGG 4 cut(s) 13, 488, 603, 1564
Bse21I CCTNAGG 1 cut(s) 564
Bse3DI GCAATG 3 cut(s) 669, 1449, 1586
BseBI CCWGG 6 cut(s) 26, 62, 383, 749, 1113, 1496
BseDI CCNNGG 3 cut(s) 25, 1112, 1534
BseGI GGATG 5 cut(s) 129, 808, 1228, 1374, 1438
BseLI CCNNNNNNNGG 1 cut(s) 382
BseMI GCAATG 3 cut(s) 669, 1449, 1586
BseMII CTCAG 4 cut(s) 555, 749, 1251, 1470
BseNI ACTGG 4 cut(s) 13, 488, 603, 1564
BseRI GAGGAG 3 cut(s) 98, 248, 954
BseSI GKGCMC 1 cut(s) 1095
BseXI GCAGC 5 cut(s) 691, 743, 823, 1063, 1297
BseYI CCCAGC 1 cut(s) 797
BsgI GTGCAG 2 cut(s) 479, 1601
BshFI GGCC 2 cut(s) 375, 549
BsiHKCI CYCGRG 2 cut(s) 80, 1080
BsiSI CCGG 1 cut(s) 1095
BslFI GGGAC 2 cut(s) 330, 1278
BslI CCNNNNNNNGG 1 cut(s) 382
BsmAI GTCTC 4 cut(s) 277, 496, 851, 1572
BsmFI GGGAC 2 cut(s) 330, 1278
BsnI GGCC 2 cut(s) 375, 549
Bso31I GGTCTC 1 cut(s) 851
BsoBI CYCGRG 2 cut(s) 80, 1080
Bsp119I TTCGAA 1 cut(s) 420
Bsp1286I GDGCHC 1 cut(s) 1095
Bsp1407I TGTACA 1 cut(s) 1272
Bsp143I GATC 6 cut(s) 175, 687, 1129, 1240, 1381, 1642
BspACI CCGC 7 cut(s) 4, 14, 77, 168, 511, 766, 861
BspANI GGCC 2 cut(s) 375, 549
BspCNI CTCAG 4 cut(s) 556, 748, 1252, 1471
BspLI GGNNCC 5 cut(s) 318, 319, 550, 1180, 1540
BspPI GGATC 2 cut(s) 682, 1389
BspQI GCTCTTC 1 cut(s) 1065
BspT104I TTCGAA 1 cut(s) 420
BspTNI GGTCTC 1 cut(s) 851
BsrBI CCGCTC 3 cut(s) 14, 79, 170
BsrDI GCAATG 3 cut(s) 669, 1449, 1586
BsrGI TGTACA 1 cut(s) 1272
BsrI ACTGG 4 cut(s) 13, 488, 603, 1564
BssECI CCNNGG 3 cut(s) 25, 1112, 1534
BssMI GATC 6 cut(s) 175, 687, 1129, 1240, 1381, 1642
BssNAI GTATAC 4 cut(s) 450, 1125, 1306, 1625
BssSI CACGAG 1 cut(s) 1605
BssT1I CCWWGG 1 cut(s) 1534
Bst1107I GTATAC 4 cut(s) 450, 1125, 1306, 1625
Bst2BI CACGAG 1 cut(s) 1605
Bst2UI CCWGG 6 cut(s) 26, 62, 383, 749, 1113, 1496
Bst4CI ACNGT 5 cut(s) 74, 271, 457, 867, 1622
Bst6I CTCTTC 5 cut(s) 125, 159, 618, 1065, 1343
BstAPI GCANNNNNTGC 1 cut(s) 1418
BstAUI TGTACA 1 cut(s) 1272
BstBI TTCGAA 1 cut(s) 420
BstC8I GCNNGC 2 cut(s) 195, 1152
BstDEI CTNAG 5 cut(s) 105, 564, 735, 1260, 1479
BstEII GGTNACC 1 cut(s) 910
BstF5I GGATG 5 cut(s) 129, 808, 1228, 1374, 1438
BstKTI GATC 6 cut(s) 178, 690, 1132, 1243, 1384, 1645
BstMAI GTCTC 4 cut(s) 277, 496, 851, 1572
BstMBI GATC 6 cut(s) 175, 687, 1129, 1240, 1381, 1642
BstMWI GCNNNNNNNGC 4 cut(s) 203, 1099, 1418, 1448
BstNI CCWGG 6 cut(s) 26, 62, 383, 749, 1113, 1496
BstNSI RCATGY 3 cut(s) 505, 1019, 1123
BstPI GGTNACC 1 cut(s) 910
BstSCI CCNGG 7 cut(s) 24, 60, 381, 747, 1093, 1111, 1494
BstSFI CTRYAG 1 cut(s) 1651
BstSLI GKGCMC 1 cut(s) 1095
BstV1I GCAGC 5 cut(s) 691, 743, 823, 1063, 1297
BstV2I GAAGAC 1 cut(s) 816
BstX2I RGATCY 3 cut(s) 687, 1240, 1642
BstYI RGATCY 3 cut(s) 687, 1240, 1642
BstZ17I GTATAC 4 cut(s) 450, 1125, 1306, 1625
Bsu36I CCTNAGG 1 cut(s) 564
BsuI GTATCC 2 cut(s) 627, 1405
BsuRI GGCC 2 cut(s) 375, 549
BtrI CACGTC 1 cut(s) 371
BtsCI GGATG 5 cut(s) 129, 808, 1228, 1374, 1438
BtsIMutI CAGTG 3 cut(s) 462, 610, 1257
Cac8I GCNNGC 2 cut(s) 195, 1152
Cfr13I GGNCC 3 cut(s) 287, 317, 548
CseI GACGC 1 cut(s) 803
Csp6I GTAC 3 cut(s) 262, 1117, 1273
CviAII CATG 5 cut(s) 256, 502, 1016, 1120, 1581
CviQI GTAC 3 cut(s) 262, 1117, 1273
DdeI CTNAG 5 cut(s) 105, 564, 735, 1260, 1479
DpnI GATC 6 cut(s) 177, 689, 1131, 1242, 1383, 1644
DpnII GATC 6 cut(s) 175, 687, 1129, 1240, 1381, 1642
EaeI YGGCCR 1 cut(s) 373
Eam1104I CTCTTC 5 cut(s) 125, 159, 618, 1065, 1343
EarI CTCTTC 5 cut(s) 125, 159, 618, 1065, 1343
EciI GGCGGA 1 cut(s) 526
Eco130I CCWWGG 1 cut(s) 1534
Eco31I GGTCTC 1 cut(s) 851
Eco32I GATATC 1 cut(s) 1109
Eco47I GGWCC 2 cut(s) 287, 317
Eco57I CTGAAG 1 cut(s) 642
Eco81I CCTNAGG 1 cut(s) 564
Eco88I CYCGRG 2 cut(s) 80, 1080
Eco91I GGTNACC 1 cut(s) 910
EcoO109I RGGNCCY 1 cut(s) 317
EcoO65I GGTNACC 1 cut(s) 910
EcoRI GAATTC 1 cut(s) 664
EcoRII CCWGG 6 cut(s) 24, 60, 381, 747, 1111, 1494
EcoRV GATATC 1 cut(s) 1109
EcoT14I CCWWGG 1 cut(s) 1534
ErhI CCWWGG 1 cut(s) 1534
FaeI CATG 5 cut(s) 259, 505, 1019, 1123, 1584
FalI AAGNNNNNCTT 2 cut(s) 1455, 1487
FaqI GGGAC 2 cut(s) 330, 1278
FatI CATG 5 cut(s) 255, 501, 1015, 1119, 1580
FauNDI CATATG 1 cut(s) 1000
FblI GTMKAC 5 cut(s) 449, 712, 1124, 1305, 1624
Fnu4HI GCNGC 5 cut(s) 705, 732, 837, 1077, 1286
FokI GGATG 5 cut(s) 116, 815, 1215, 1381, 1445
Fsp4HI GCNGC 5 cut(s) 705, 732, 837, 1077, 1286
FspBI CTAG 3 cut(s) 245, 575, 1640
GluI GCNGC 5 cut(s) 705, 732, 837, 1077, 1286
GsaI CCCAGC 1 cut(s) 801
GsuI CTGGAG 6 cut(s) 30, 83, 156, 404, 471, 1517
HaeIII GGCC 2 cut(s) 375, 549
HapII CCGG 1 cut(s) 1095
HgaI GACGC 1 cut(s) 803
Hin1II CATG 5 cut(s) 259, 505, 1019, 1123, 1584
HincII GTYRAC 1 cut(s) 58
HindII GTYRAC 1 cut(s) 58
HinfI GANTC 1 cut(s) 1372
HpaII CCGG 1 cut(s) 1095
HphI GGTGA 2 cut(s) 904, 1373
Hpy166II GTNNAC 8 cut(s) 58, 450, 465, 713, 1125, 1273, 1306, 1625
Hpy188I TCNGA 6 cut(s) 99, 738, 781, 978, 1390, 1480
Hpy8I GTNNAC 8 cut(s) 58, 450, 465, 713, 1125, 1273, 1306, 1625
Hpy99I CGWCG 2 cut(s) 165, 372
HpyAV CCTTC 7 cut(s) 57, 416, 1092, 1160, 1334, 1358, 1423
HpyCH4III ACNGT 5 cut(s) 74, 271, 457, 867, 1622
HpyCH4IV ACGT 4 cut(s) 370, 614, 877, 952
HpyCH4V TGCA 8 cut(s) 197, 460, 674, 731, 1412, 1421, 1618, 1664
HpyF10VI GCNNNNNNNGC 4 cut(s) 203, 1099, 1418, 1448
HpyF3I CTNAG 5 cut(s) 105, 564, 735, 1260, 1479
HpySE526I ACGT 4 cut(s) 370, 614, 877, 952
Hsp92II CATG 5 cut(s) 259, 505, 1019, 1123, 1584
KflI GGGWCCC 1 cut(s) 317
Kzo9I GATC 6 cut(s) 175, 687, 1129, 1240, 1381, 1642
LguI GCTCTTC 1 cut(s) 1065
LmnI GCTCC 5 cut(s) 11, 170, 175, 1184, 1538
Lsp1109I GCAGC 5 cut(s) 691, 743, 823, 1063, 1297
LweI GCATC 3 cut(s) 90, 1045, 1651
MaeI CTAG 3 cut(s) 245, 575, 1640
MaeII ACGT 4 cut(s) 370, 614, 877, 952
MaeIII GTNAC 1 cut(s) 910
MalI GATC 6 cut(s) 177, 689, 1131, 1242, 1383, 1644
MbiI CCGCTC 3 cut(s) 14, 79, 170
MboI GATC 6 cut(s) 175, 687, 1129, 1240, 1381, 1642
MfeI CAATTG 3 cut(s) 651, 945, 1422
MflI RGATCY 3 cut(s) 687, 1240, 1642
MhlI GDGCHC 1 cut(s) 1095
MlsI TGGCCA 1 cut(s) 375
MluNI TGGCCA 1 cut(s) 375
MlyI GAGTC 1 cut(s) 1366
MmeI TCCRAC 2 cut(s) 750, 1438
Mox20I TGGCCA 1 cut(s) 375
MscI TGGCCA 1 cut(s) 375
MseI TTAA 6 cut(s) 110, 312, 339, 519, 924, 1202
MslI CAYNNNNRTG 2 cut(s) 1003, 1389
Msp20I TGGCCA 1 cut(s) 375
MspI CCGG 1 cut(s) 1095
MspR9I CCNGG 7 cut(s) 26, 62, 383, 749, 1095, 1113, 1496
MunI CAATTG 3 cut(s) 651, 945, 1422
MvaI CCWGG 6 cut(s) 26, 62, 383, 749, 1113, 1496
MwoI GCNNNNNNNGC 4 cut(s) 203, 1099, 1418, 1448
NciI CCSGG 1 cut(s) 1095
NdeI CATATG 1 cut(s) 1000
NdeII GATC 6 cut(s) 175, 687, 1129, 1240, 1381, 1642
NlaIII CATG 5 cut(s) 259, 505, 1019, 1123, 1584
NlaIV GGNNCC 5 cut(s) 318, 319, 550, 1180, 1540
NmuCI GTSAC 1 cut(s) 910
NspI RCATGY 3 cut(s) 505, 1019, 1123
NspV TTCGAA 1 cut(s) 420
PaeR7I CTCGAG 2 cut(s) 80, 1080
PciI ACATGT 1 cut(s) 1119
PciSI GCTCTTC 1 cut(s) 1065
PflMI CCANNNNNTGG 1 cut(s) 382
PfoI TCCNGGA 1 cut(s) 381
PkrI GCNGC 5 cut(s) 706, 733, 838, 1078, 1287
PleI GAGTC 1 cut(s) 1366
PpsI GAGTC 1 cut(s) 1366
PpuMI RGGWCCY 1 cut(s) 317
PscI ACATGT 1 cut(s) 1119
Psp5II RGGWCCY 1 cut(s) 317
Psp6I CCWGG 6 cut(s) 24, 60, 381, 747, 1111, 1494
PspEI GGTNACC 1 cut(s) 910
PspFI CCCAGC 1 cut(s) 797
PspGI CCWGG 6 cut(s) 24, 60, 381, 747, 1111, 1494
PspN4I GGNNCC 5 cut(s) 318, 319, 550, 1180, 1540
PspPI GGNCC 3 cut(s) 287, 317, 548
PspPPI RGGWCCY 1 cut(s) 317
PspXI VCTCGAGB 1 cut(s) 80
PsuI RGATCY 3 cut(s) 687, 1240, 1642
RsaI GTAC 3 cut(s) 263, 1118, 1274
RsaNI GTAC 3 cut(s) 262, 1117, 1273
RseI CAYNNNNRTG 2 cut(s) 1003, 1389
SapI GCTCTTC 1 cut(s) 1065
SaqAI TTAA 6 cut(s) 110, 312, 339, 519, 924, 1202
SatI GCNGC 5 cut(s) 705, 732, 837, 1077, 1286
Sau3AI GATC 6 cut(s) 175, 687, 1129, 1240, 1381, 1642
Sau96I GGNCC 3 cut(s) 287, 317, 548
SchI GAGTC 1 cut(s) 1366
ScrFI CCNGG 7 cut(s) 26, 62, 383, 749, 1095, 1113, 1496
SduI GDGCHC 1 cut(s) 1095
SfaNI GCATC 3 cut(s) 90, 1045, 1651
SfcI CTRYAG 1 cut(s) 1651
Sfr274I CTCGAG 2 cut(s) 80, 1080
SfuI TTCGAA 1 cut(s) 420
SinI GGWCC 2 cut(s) 287, 317
SlaI CTCGAG 2 cut(s) 80, 1080
SmiMI CAYNNNNRTG 2 cut(s) 1003, 1389
SmlI CTYRAG 2 cut(s) 80, 1080
SmoI CTYRAG 2 cut(s) 80, 1080
SsiI CCGC 7 cut(s) 4, 14, 77, 168, 511, 766, 861
SspI AATATT 1 cut(s) 343
SspMI CTAG 3 cut(s) 245, 575, 1640
StyD4I CCNGG 7 cut(s) 24, 60, 381, 747, 1093, 1111, 1494
StyI CCWWGG 1 cut(s) 1534
TaaI ACNGT 5 cut(s) 74, 271, 457, 867, 1622
TaiI ACGT 4 cut(s) 373, 617, 880, 955
TaqI TCGA 7 cut(s) 36, 50, 81, 178, 367, 420, 1081
TatI WGTACW 2 cut(s) 261, 1272
Tru1I TTAA 6 cut(s) 110, 312, 339, 519, 924, 1202
Tru9I TTAA 6 cut(s) 110, 312, 339, 519, 924, 1202
TscAI CASTG 3 cut(s) 462, 610, 1264
TseFI GTSAC 1 cut(s) 910
TseI GCWGC 5 cut(s) 704, 731, 836, 1076, 1285
Tsp45I GTSAC 1 cut(s) 910
TspDTI ATGAA 5 cut(s) 115, 677, 1017, 1361, 1460
TspRI CASTG 3 cut(s) 462, 610, 1264
Van91I CCANNNNNTGG 1 cut(s) 382
VpaK11BI GGWCC 2 cut(s) 287, 317
XapI RAATTY 4 cut(s) 642, 664, 1191, 1523
XceI RCATGY 3 cut(s) 505, 1019, 1123
XhoI CTCGAG 2 cut(s) 80, 1080
XmiI GTMKAC 5 cut(s) 449, 712, 1124, 1305, 1624
XspI CTAG 3 cut(s) 245, 575, 1640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.