Rmu_sc0004510.1_g000008

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004510.1
OG0007708
Physical Location & Seq
Reverse (-)
34223 .. 38778
4556 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 939 bp
atgcagccagatttggttctttttacaggtgattttggtgaagagaacattggaattgttcgcagcgttgcaaatcttgaatttgctaaagcagttattttgggaaaccatgatgcctggcatacaaaaaagttttcaggaaagacaaaagacggcgttcaacttcagctagactgtctaggcgaggagcatgtagcttacagatgtttggactttgctacggtaaaactgagcattgttggtggacgacctttttctagtgggggaaaccagttatttcgattaaagcttttgtctgcaaggtatggagtccaagacatggatggaagtgctaagagaatctgcaaagcagctttgggtgctccagaggaccatatggtcattattcttgcacacaatggacccacaggtcttggttctaacttggatgacatatgtggaaaagactgggactttggaggtggagatcatggtgatgcagatctagcacaagccctgtccctcctaaaagagtccggcaaaacctgtgttccattggtagtgtttggtcacatgcataaacagctagcaggtggaaatggtcttcggaaaatgatcgtgtggtcggcgcggtctccggcgaccggtgacaggattccggcgaccaatgaccggattccgggaaccggtaaccgaaatccggcgaccgatgactggaatccggaatccggctattattgccccccaaagcagaatgcgcgacctccatacttgaccgcgccaaaggaggtagcggtcccaatgaccggctggctccgacagcgtcgcggcactgagatggttgctctgattgctgtactgctcggccaatcggatctgacagagacagagtttcagtcagattctgaaggcctcgacatcaccaccattagagaagtgaaggaggtttggttttcgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

312

Amino Acids

33.85

Weight (kDa)

5.92

Isoelectric Point (pI)

40.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 2 - 187 1.2e-07 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 560
AasI GACNNNNNNGTC 2 cut(s) 377, 408
Acc36I ACCTGC 1 cut(s) 560
AccB7I CCANNNNNTGG 1 cut(s) 319
AccII CGCG 4 cut(s) 610, 739, 758, 807
AccIII TCCGGA 1 cut(s) 700
AciI CCGC 4 cut(s) 610, 756, 773, 807
AclWI GGATC 1 cut(s) 861
AcoI YGGCCR 1 cut(s) 844
AcsI RAATTY 1 cut(s) 80
AcuI CTGAAG 2 cut(s) 149, 906
AfaI GTAC 1 cut(s) 837
AgeI ACCGGT 2 cut(s) 623, 665
AgsI TTSAA 2 cut(s) 80, 161
AjnI CCWGG 1 cut(s) 116
AjuI GAANNNNNNNTTGG 2 cut(s) 33, 65
AluBI AGCT 5 cut(s) 169, 197, 289, 353, 565
AluI AGCT 5 cut(s) 169, 197, 289, 353, 565
Alw21I GWGCWC 1 cut(s) 364
Alw26I GTCTC 2 cut(s) 618, 857
AlwI GGATC 1 cut(s) 861
AlwNI CAGNNNCTG 1 cut(s) 884
Aor13HI TCCGGA 1 cut(s) 700
AoxI GGCC 2 cut(s) 844, 889
ApeKI GCWGC 3 cut(s) 4, 63, 350
ApoI RAATTY 1 cut(s) 80
ArsI GACNNNNNNTTYG 2 cut(s) 437, 469
AsiGI ACCGGT 2 cut(s) 623, 665
AspLEI GCGC 3 cut(s) 610, 739, 760
AspS9I GGNCC 3 cut(s) 370, 401, 775
AsuC2I CCSGG 1 cut(s) 660
AsuHPI GGTGA 5 cut(s) 41, 50, 485, 638, 892
AsuNHI GCTAGC 1 cut(s) 565
AvaII GGWCC 3 cut(s) 370, 401, 775
BbsI GAAGAC 1 cut(s) 575
Bbv12I GWGCWC 1 cut(s) 364
BbvI GCAGC 3 cut(s) 16, 75, 362
BccI CCATC 2 cut(s) 317, 811
BceAI ACGGC 1 cut(s) 169
BciT130I CCWGG 1 cut(s) 118
BcnI CCSGG 1 cut(s) 660
BcoDI GTCTC 2 cut(s) 618, 857
BfaI CTAG 5 cut(s) 170, 179, 258, 485, 566
BfuAI ACCTGC 1 cut(s) 560
BglII AGATCT 1 cut(s) 481
BisI GCNGC 4 cut(s) 5, 64, 351, 808
BlsI GCNGC 4 cut(s) 6, 65, 352, 809
Bme1390I CCNGG 2 cut(s) 118, 660
Bme18I GGWCC 3 cut(s) 370, 401, 775
BmgT120I GGNCC 3 cut(s) 370, 401, 775
BmiI GGNNCC 4 cut(s) 403, 664, 777, 794
BmrFI CCNGG 2 cut(s) 118, 660
BmrI ACTGGG 1 cut(s) 457
BmsI GCATC 2 cut(s) 103, 466
BmtI GCTAGC 1 cut(s) 569
BmuI ACTGGG 1 cut(s) 457
BpiI GAAGAC 1 cut(s) 575
BpmI CTGGAG 1 cut(s) 348
BpuMI CCSGG 1 cut(s) 660
BsaBI GATNNNNATC 1 cut(s) 480
BsaI GGTCTC 1 cut(s) 618
BsaWI WCCGGW 4 cut(s) 623, 651, 665, 700
BsaXI ACNNNNNCTCC 1 cut(s) 914
Bse118I RCCGGY 3 cut(s) 623, 665, 785
Bse1I ACTGG 3 cut(s) 271, 452, 698
Bse8I GATNNNNATC 1 cut(s) 480
BseAI TCCGGA 1 cut(s) 700
BseBI CCWGG 1 cut(s) 118
BseGI GGATG 2 cut(s) 328, 433
BseJI GATNNNNATC 1 cut(s) 480
BseMII CTCAG 2 cut(s) 221, 804
BseNI ACTGG 3 cut(s) 271, 452, 698
BseRI GAGGAG 1 cut(s) 200
BseXI GCAGC 3 cut(s) 16, 75, 362
Bsh1236I CGCG 4 cut(s) 610, 739, 758, 807
Bsh1285I CGRYCG 2 cut(s) 624, 687
BshFI GGCC 2 cut(s) 846, 891
BshTI ACCGGT 2 cut(s) 623, 665
BsiEI CGRYCG 2 cut(s) 624, 687
BsiHKAI GWGCWC 1 cut(s) 364
BslFI GGGAC 3 cut(s) 464, 484, 761
BsmAI GTCTC 2 cut(s) 618, 857
BsmFI GGGAC 3 cut(s) 464, 484, 761
BsmI GAATGC 1 cut(s) 739
BsnI GGCC 2 cut(s) 846, 891
Bso31I GGTCTC 1 cut(s) 618
Bsp1286I GDGCHC 1 cut(s) 364
Bsp13I TCCGGA 1 cut(s) 700
Bsp143I GATC 4 cut(s) 466, 481, 594, 853
BspACI CCGC 4 cut(s) 610, 756, 773, 807
BspANI GGCC 2 cut(s) 846, 891
BspCNI CTCAG 2 cut(s) 222, 805
BspEI TCCGGA 1 cut(s) 700
BspFNI CGCG 4 cut(s) 610, 739, 758, 807
BspLI GGNNCC 4 cut(s) 403, 664, 777, 794
BspMI ACCTGC 1 cut(s) 560
BspOI GCTAGC 1 cut(s) 569
BspPI GGATC 1 cut(s) 861
BspTNI GGTCTC 1 cut(s) 618
BsrFI RCCGGY 3 cut(s) 623, 665, 785
BsrI ACTGG 3 cut(s) 271, 452, 698
BssAI RCCGGY 3 cut(s) 623, 665, 785
BssMI GATC 4 cut(s) 466, 481, 594, 853
Bst2UI CCWGG 1 cut(s) 118
Bst4CI ACNGT 2 cut(s) 176, 223
Bst6I CTCTTC 1 cut(s) 36
BstC8I GCNNGC 2 cut(s) 567, 791
BstDEI CTNAG 3 cut(s) 230, 333, 813
BstEII GGTNACC 1 cut(s) 668
BstF5I GGATG 2 cut(s) 328, 433
BstFNI CGCG 4 cut(s) 610, 739, 758, 807
BstHHI GCGC 3 cut(s) 610, 739, 760
BstKTI GATC 4 cut(s) 469, 484, 597, 856
BstMAI GTCTC 2 cut(s) 618, 857
BstMBI GATC 4 cut(s) 466, 481, 594, 853
BstMCI CGRYCG 2 cut(s) 624, 687
BstMWI GCNNNNNNNGC 7 cut(s) 359, 485, 562, 717, 736, 799, 830
BstNI CCWGG 1 cut(s) 118
BstNSI RCATGY 2 cut(s) 194, 556
BstPI GGTNACC 1 cut(s) 668
BstSCI CCNGG 2 cut(s) 116, 658
BstUI CGCG 4 cut(s) 610, 739, 758, 807
BstV1I GCAGC 3 cut(s) 16, 75, 362
BstV2I GAAGAC 1 cut(s) 575
BstX2I RGATCY 2 cut(s) 481, 853
BstYI RGATCY 2 cut(s) 481, 853
BsuRI GGCC 2 cut(s) 846, 891
BtsCI GGATG 2 cut(s) 328, 433
BtsIMutI CAGTG 1 cut(s) 810
BveI ACCTGC 1 cut(s) 560
Cac8I GCNNGC 2 cut(s) 567, 791
CaiI CAGNNNCTG 1 cut(s) 884
CfoI GCGC 3 cut(s) 610, 739, 760
Cfr10I RCCGGY 3 cut(s) 623, 665, 785
Cfr13I GGNCC 3 cut(s) 370, 401, 775
CseI GACGC 1 cut(s) 791
Csp6I GTAC 1 cut(s) 836
CspAI ACCGGT 2 cut(s) 623, 665
CspCI CAANNNNNGTGG 2 cut(s) 394, 429
CviAII CATG 5 cut(s) 110, 191, 319, 470, 553
CviQI GTAC 1 cut(s) 836
DdeI CTNAG 3 cut(s) 230, 333, 813
DpnI GATC 4 cut(s) 468, 483, 596, 855
DpnII GATC 4 cut(s) 466, 481, 594, 853
DrdI GACNNNNNNGTC 2 cut(s) 377, 408
DseDI GACNNNNNNGTC 2 cut(s) 377, 408
EaeI YGGCCR 1 cut(s) 844
Eam1104I CTCTTC 1 cut(s) 36
EarI CTCTTC 1 cut(s) 36
Eco147I AGGCCT 1 cut(s) 891
Eco31I GGTCTC 1 cut(s) 618
Eco47I GGWCC 3 cut(s) 370, 401, 775
Eco57I CTGAAG 2 cut(s) 149, 906
Eco91I GGTNACC 1 cut(s) 668
EcoO65I GGTNACC 1 cut(s) 668
EcoRII CCWGG 1 cut(s) 116
EcoT22I ATGCAT 1 cut(s) 558
FaeI CATG 5 cut(s) 113, 194, 322, 473, 556
FaqI GGGAC 3 cut(s) 464, 484, 761
FatI CATG 5 cut(s) 109, 190, 318, 469, 552
FauNDI CATATG 2 cut(s) 375, 434
Fnu4HI GCNGC 4 cut(s) 5, 64, 351, 808
FokI GGATG 2 cut(s) 335, 440
Fsp4HI GCNGC 4 cut(s) 5, 64, 351, 808
FspBI CTAG 5 cut(s) 170, 179, 258, 485, 566
GlaI GCGC 3 cut(s) 609, 738, 759
GluI GCNGC 4 cut(s) 5, 64, 351, 808
GsuI CTGGAG 1 cut(s) 348
HaeIII GGCC 2 cut(s) 846, 891
HgaI GACGC 1 cut(s) 791
HhaI GCGC 3 cut(s) 610, 739, 760
Hin1II CATG 5 cut(s) 113, 194, 322, 473, 556
Hin6I GCGC 3 cut(s) 608, 737, 758
HinP1I GCGC 3 cut(s) 608, 737, 758
HindIII AAGCTT 1 cut(s) 287
HinfI GANTC 8 cut(s) 309, 339, 512, 634, 655, 697, 704, 881
HphI GGTGA 5 cut(s) 41, 50, 485, 638, 892
Hpy166II GTNNAC 1 cut(s) 245
Hpy188I TCNGA 7 cut(s) 588, 797, 828, 853, 858, 880, 886
Hpy188III TCNNGA 5 cut(s) 77, 138, 365, 701, 936
Hpy8I GTNNAC 1 cut(s) 245
Hpy99I CGWCG 1 cut(s) 807
HpyAV CCTTC 2 cut(s) 881, 913
HpyCH4III ACNGT 2 cut(s) 176, 223
HpyCH4V TGCA 7 cut(s) 4, 71, 299, 345, 392, 479, 556
HpyF10VI GCNNNNNNNGC 7 cut(s) 359, 485, 562, 717, 736, 799, 830
HpyF3I CTNAG 3 cut(s) 230, 333, 813
Hsp92II CATG 5 cut(s) 113, 194, 322, 473, 556
HspAI GCGC 3 cut(s) 608, 737, 758
Kpn2I TCCGGA 1 cut(s) 700
Kzo9I GATC 4 cut(s) 466, 481, 594, 853
LmnI GCTCC 3 cut(s) 187, 367, 798
Lsp1109I GCAGC 3 cut(s) 16, 75, 362
LweI GCATC 2 cut(s) 103, 466
MaeI CTAG 5 cut(s) 170, 179, 258, 485, 566
MaeIII GTNAC 3 cut(s) 548, 626, 668
MalI GATC 4 cut(s) 468, 483, 596, 855
MboI GATC 4 cut(s) 466, 481, 594, 853
MboII GAAGA 2 cut(s) 53, 575
MflI RGATCY 2 cut(s) 481, 853
MhlI GDGCHC 1 cut(s) 364
MluCI AATT 2 cut(s) 54, 80
MlyI GAGTC 2 cut(s) 318, 521
MmeI TCCRAC 1 cut(s) 820
MnlI CCTC 8 cut(s) 178, 361, 452, 512, 753, 760, 902, 916
Mph1103I ATGCAT 1 cut(s) 558
MroI TCCGGA 1 cut(s) 700
MseI TTAA 1 cut(s) 284
MslI CAYNNNNRTG 2 cut(s) 474, 815
MspR9I CCNGG 2 cut(s) 118, 660
Mva1269I GAATGC 1 cut(s) 739
MvaI CCWGG 1 cut(s) 118
MvnI CGCG 4 cut(s) 610, 739, 758, 807
MwoI GCNNNNNNNGC 7 cut(s) 359, 485, 562, 717, 736, 799, 830
NciI CCSGG 1 cut(s) 660
NdeI CATATG 2 cut(s) 375, 434
NdeII GATC 4 cut(s) 466, 481, 594, 853
NheI GCTAGC 1 cut(s) 565
NlaIII CATG 5 cut(s) 113, 194, 322, 473, 556
NlaIV GGNNCC 4 cut(s) 403, 664, 777, 794
NmeAIII GCCGAG 1 cut(s) 822
NmuCI GTSAC 2 cut(s) 548, 626
NsiI ATGCAT 1 cut(s) 558
NspI RCATGY 2 cut(s) 194, 556
PaqCI CACCTGC 1 cut(s) 560
PceI AGGCCT 1 cut(s) 891
PctI GAATGC 1 cut(s) 739
PfeI GAWTC 6 cut(s) 339, 634, 655, 697, 704, 881
PflFI GACNNNGTC 1 cut(s) 801
PflMI CCANNNNNTGG 1 cut(s) 319
PfoI TCCNGGA 1 cut(s) 658
PinAI ACCGGT 2 cut(s) 623, 665
PkrI GCNGC 4 cut(s) 6, 65, 352, 809
PleI GAGTC 2 cut(s) 317, 520
PpsI GAGTC 2 cut(s) 317, 520
Psp6I CCWGG 1 cut(s) 116
PspEI GGTNACC 1 cut(s) 668
PspGI CCWGG 1 cut(s) 116
PspN4I GGNNCC 4 cut(s) 403, 664, 777, 794
PspPI GGNCC 3 cut(s) 370, 401, 775
PstNI CAGNNNCTG 1 cut(s) 884
PsuI RGATCY 2 cut(s) 481, 853
PsyI GACNNNGTC 1 cut(s) 801
RsaI GTAC 1 cut(s) 837
RsaNI GTAC 1 cut(s) 836
RseI CAYNNNNRTG 2 cut(s) 474, 815
SaqAI TTAA 1 cut(s) 284
SatI GCNGC 4 cut(s) 5, 64, 351, 808
Sau3AI GATC 4 cut(s) 466, 481, 594, 853
Sau96I GGNCC 3 cut(s) 370, 401, 775
SchI GAGTC 2 cut(s) 318, 521
ScrFI CCNGG 2 cut(s) 118, 660
SduI GDGCHC 1 cut(s) 364
SfaNI GCATC 2 cut(s) 103, 466
SinI GGWCC 3 cut(s) 370, 401, 775
SmiMI CAYNNNNRTG 2 cut(s) 474, 815
Sse9I AATT 2 cut(s) 54, 80
SseBI AGGCCT 1 cut(s) 891
SsiI CCGC 4 cut(s) 610, 756, 773, 807
SspMI CTAG 5 cut(s) 170, 179, 258, 485, 566
StuI AGGCCT 1 cut(s) 891
StyD4I CCNGG 2 cut(s) 116, 658
TaaI ACNGT 2 cut(s) 176, 223
TaqI TCGA 2 cut(s) 280, 894
TaqII GACCGA 1 cut(s) 701
TasI AATT 2 cut(s) 54, 80
TatI WGTACW 1 cut(s) 835
TauI GCSGC 1 cut(s) 810
TfiI GAWTC 6 cut(s) 339, 634, 655, 697, 704, 881
Tru1I TTAA 1 cut(s) 284
Tru9I TTAA 1 cut(s) 284
TscAI CASTG 1 cut(s) 817
TseFI GTSAC 2 cut(s) 548, 626
TseI GCWGC 3 cut(s) 4, 63, 350
Tsp45I GTSAC 2 cut(s) 548, 626
TspRI CASTG 1 cut(s) 817
Tth111I GACNNNGTC 1 cut(s) 801
Van91I CCANNNNNTGG 1 cut(s) 319
VpaK11BI GGWCC 3 cut(s) 370, 401, 775
XapI RAATTY 1 cut(s) 80
XceI RCATGY 2 cut(s) 194, 556
XcmI CCANNNNNNNNNTGG 2 cut(s) 320, 786
XspI CTAG 5 cut(s) 170, 179, 258, 485, 566
Zsp2I ATGCAT 1 cut(s) 558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.