Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004550.1

Orthogroup ID

OG0005831

Physical Location & Seq

Genomic Coordinates Reverse (-)

28517 .. 34537

Gene Structure 6021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004550.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

atggcgcgctcagctccaattctcaaccgcgacacctcgcacctgctcttcaccttcaaacctccccactctcccttccactctctcacttctctccgcctctccaagcctactctcctccctactcttctatcttcttcttcttcttcgcctggttcttgtgtcacgcgcgtcaccaccgtcccggtagagtacgcgccgccggctcccgaattcgagttcgacagcgagctcgcgcgcctcaagtctctccgctcccgccctactctcctccctactcttttatcttcttcttcttcgcctggttcttgcatcacgcgcgtcaccaccgtcccggtagagtacgcgccgccggctcccgaattcgagttcgacagcgagctcgcgcgcctcaagtctctccgctccggcgttgccggcgccaaatcgctacgcgccaaaaccagagtgatcgacggagattccagagtgaaaagattcttcaattccggcaacaaccgagtcttctctgcggttttggcctcgctggatttgagtccgaccgagtcgttcttgttcaagtgcctcgtggccgccggccaagagcacgtgctcggctgggggtttgagttcgccgagagcgaggcgaagccggccaggagccccgtgaagaccgcgttttacgccattgtagaaatgattgagaaattggatgtgaacagtgacggttcggggaagaagaagaagaagaagaaggttcggtttgctttgaatgatgaagattttgaggacttgaagaagctattgaagaatttgggagaggttgaacagttctataactgcattggaggagtgattggatatcagataacagtaatggagcttctagcgcaatcgagagttgaaatgcagactacaaattggtataacaacatacaagagcagatggaatgccagtttttggaaattcatgcacctagtggacttgatctttctgaaaatgcagaatatgcagctcaagctgctctatggggaattcagggtttgccagacctaggtgaaatttatcctctgggaggctccgccgacaggcttggtttggttgatcctgatacaggtgaatgtctcccagctgcaatgcttccgtattgtgggcggactttattggaaggtcttataagagatcttcaggctagggagtttttgtacttcaagatttttgggaagcagtgcatcactcctgttgctatcatgacaagtgctgcaaagaacaaccatgaacacataacttctctttgtgaaaaacttgaatggtttaagagaggtcgatcaagtttccaacttttcgaacagccccttgttccagctgttagtgcagaggatgggcaatggataatcaagaaaccttttgctcccatttgcaagcctggtggtcatggtgtgatatggaaacttgcttatgataaaggcattttccaatggttttatgatcatggacgtaaaggtgcaactgtacgacaagttagcaatgttgtggccgctacagatttgactctcttggcactagcagggattggtttacaccatgggaagaaactggggtttgcttcctgtaagaggaactcgggggctacagaaggaattaatgttctaatggagaagaaaaatctggatggaaggtgggcatatggtttgtcttgcattgaatacacagagtttgataaatttgggatagcagatggacctcattctcgtaataggttgcaggcagagttccctgccaatacaaacattttgtatgtagacttaccttccgcggagttggtgggttccagtaagaatacagacagcttacctggcatggtgttaaatgttaaaaaggcgatatcatttgtagacaattttggaaatccacacagtgttcctggtggcaggcttgaatgcacgatgcaaaatattgccgacaattttcttaatacacatccatctagagattataaaggcattgaagataagcttgatacctttattgtttttaataaaagaagacgggttacatcatctactaagaggaaaagaaggcatgcagacaaatctttacaccaaactccggatggttcactgttggatatcctaagaaatgctcatgaccttctgtctcagtgtgatattcaacttcctgagattggaagtaatgacaagtatctaaattctggaccaccatttcttattcttctgcaccctgctcttggccccctttgggaggtcaccagacaaaagttctgtggaggctcaatatgcaaaggctctgagttacaagtagaggtcgcagagttcctgtggaggaatgttcagcttgatggaagcctgatcatagaggctgataatgttatgggctcaagtagggttggtgaagatggtgaacctattttacaatatggacacaggtgtggaaggtgtaaattacagaacgtaagagtattgaatgagggaattgactggaattttgaagacaatgtctattggaagcatgttgtgcagcgcatccaagcatgtaaggttgtactgcatggaaatgctgagtttgaggcaactgatgttatcttaaagggaaatcatatatttgaagttccaaatggctacaaaatgaagatcacgccaggagattcaggtttagcaatcggattagatcctatcgcagagaatatgatggacagtggaagctggtattggaagtacgggatcaagggcacaaatattcagttggaattggtagagttgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003983 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006011 GO:0006082 GO:0006139 GO:0006629 GO:0006725 GO:0006790 GO:0006793 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009225 GO:0009226 GO:0009507 GO:0009536 GO:0009987 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046505 GO:0046506 GO:0051748 GO:0055086 GO:0070569 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGP

Protein Analysis

920

Amino Acids

101.96

Weight (kDa)

7.07

Isoelectric Point (pI)

47.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005831)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56040
fragaria_vesca	FvH4_7g24830 FvH4_7g24830 FvH4_7g24830 FvH4_7g24830 FvH4_7g24830 FvH4_7g24830 FvH4_7g24830
malus_domestica	MD01G1156200.v1.1 MD01G1156300.v1.1 MD07G1224900.v1.1
prunus_persica	Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1
pyrus_communis	pycom07g20360
rosa_chinensis	RchiOBHm_Chr1g0370701
rosa_laevigata	RLG00000027016
rosa_multiflora	Rmu_sc0004550.1_g000012
rosa_roxburghii	Rroxscaffold_4G00286290
rosa_rugosa	Rorug01G0358600
rosa_samantha	Rh1AG368300 Rh1BG331700 Rh1CG345700 Rh1DG363100
rosa_wichuraiana	Rw1G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1157, 1977
AarI	CACCTGC	1 cut(s)	51
Acc36I	ACCTGC	1 cut(s)	51
AccB1I	GGYRCC	1 cut(s)	419
AccB7I	CCANNNNNTGG	1 cut(s)	940
AccBSI	CCGCTC	2 cut(s)	255, 405
AccI	GTMKAC	2 cut(s)	1782, 1875
AccIII	TCCGGA	1 cut(s)	2089
AclWI	GGATC	3 cut(s)	1079, 2663, 2729
AcoI	YGGCCR	4 cut(s)	570, 577, 633, 1515
AcsI	RAATTY	9 cut(s)	212, 362, 790, 945, 1014, 1041, 1703, 2188, 2482
AcuI	CTGAAG	1 cut(s)	1151
AcvI	CACGTG	1 cut(s)	589
AcyI	GRCGYC	1 cut(s)	420
AdeI	CACNNNGTG	2 cut(s)	959, 1898
AfaI	GTAC	6 cut(s)	194, 344, 1187, 1494, 2544, 2717
AhdI	GACNNNNNGTC	1 cut(s)	2134
AjnI	CCWGG	7 cut(s)	151, 301, 635, 1405, 1834, 1903, 2638
AjuI	GAANNNNNNNTTGG	2 cut(s)	2692, 2724
AleI	CACNNNNGTG	1 cut(s)	2427
AloI	GAACNNNNNNTCC	2 cut(s)	1611, 1643
Alw21I	GWGCWC	4 cut(s)	234, 384, 588, 594
Alw26I	GTCTC	4 cut(s)	252, 402, 1109, 2142
AlwI	GGATC	3 cut(s)	1079, 2663, 2729
Ama87I	CYCGRG	1 cut(s)	1603
Aor13HI	TCCGGA	1 cut(s)	2089
AoxI	GGCC	6 cut(s)	519, 570, 577, 633, 1515, 2230
ApeKI	GCWGC	5 cut(s)	992, 1001, 1112, 1241, 2518
ApoI	RAATTY	9 cut(s)	212, 362, 790, 945, 1014, 1041, 1703, 2188, 2482
ArsI	GACNNNNNNTTYG	2 cut(s)	2468, 2500
AseI	ATTAAT	1 cut(s)	1623
Asp700I	GAANNNNTTC	1 cut(s)	476
AspA2I	CCTAGG	1 cut(s)	1033
AspS9I	GGNCC	3 cut(s)	1721, 2195, 2231
AsuC2I	CCSGG	2 cut(s)	185, 335
AsuHPI	GGTGA	8 cut(s)	43, 166, 316, 1049, 1109, 2239, 2402, 2411
AsuII	TTCGAA	1 cut(s)	1326
AvaI	CYCGRG	1 cut(s)	1603
AvaII	GGWCC	2 cut(s)	1721, 2195
AvrII	CCTAGG	1 cut(s)	1033
BaeGI	GKGCMC	1 cut(s)	2732
BanI	GGYRCC	1 cut(s)	419
BanII	GRGCYC	4 cut(s)	234, 384, 644, 2378
BarI	GAAGNNNNNNTAC	4 cut(s)	846, 878, 2017, 2049
BauI	CACGAG	1 cut(s)	566
BbrPI	CACGTG	1 cut(s)	589
BbsI	GAAGAC	4 cut(s)	496, 656, 2032, 2496
Bbv12I	GWGCWC	4 cut(s)	234, 384, 588, 594
BbvI	GCAGC	5 cut(s)	988, 1004, 1099, 1228, 2530
BccI	CCATC	9 cut(s)	919, 1355, 1646, 1712, 1972, 2087, 2333, 2390, 2683
BciT130I	CCWGG	7 cut(s)	153, 303, 637, 1407, 1836, 1905, 2640
BclI	TGATCA	2 cut(s)	1468, 2349
BcnI	CCSGG	2 cut(s)	185, 335
BcoDI	GTCTC	4 cut(s)	252, 402, 1109, 2142
BfaI	CTAG	6 cut(s)	866, 957, 1034, 1173, 1544, 1968
BfmI	CTRYAG	2 cut(s)	1521, 1611
BfoI	RGCGCY	1 cut(s)	423
BfuAI	ACCTGC	1 cut(s)	51
BglII	AGATCT	1 cut(s)	1162
BisI	GCNGC	9 cut(s)	200, 350, 573, 993, 1002, 1113, 1242, 1518, 2519
BlnI	CCTAGG	1 cut(s)	1033
BlpI	GCTNAGC	1 cut(s)	10
BlsI	GCNGC	9 cut(s)	201, 351, 574, 994, 1003, 1114, 1243, 1519, 2520
Bme1390I	CCNGG	9 cut(s)	153, 185, 303, 335, 637, 1407, 1836, 1905, 2640
Bme18I	GGWCC	2 cut(s)	1721, 2195
BmeRI	GACNNNNNGTC	1 cut(s)	2134
BmeT110I	CYCGRG	1 cut(s)	1603
BmgT120I	GGNCC	3 cut(s)	1721, 2195, 2231
BmiI	GGNNCC	7 cut(s)	207, 357, 421, 641, 1060, 1810, 2233
BmrFI	CCNGG	9 cut(s)	153, 185, 303, 335, 637, 1407, 1836, 1905, 2640
BmrI	ACTGGG	1 cut(s)	1586
BmsI	GCATC	4 cut(s)	321, 1221, 1917, 2532
BmuI	ACTGGG	1 cut(s)	1586
BpiI	GAAGAC	4 cut(s)	496, 656, 2032, 2496
Bpu1102I	GCTNAGC	1 cut(s)	10
Bpu14I	TTCGAA	1 cut(s)	1326
BpuEI	CTTGAG	4 cut(s)	227, 377, 981, 2362
BpuMI	CCSGG	2 cut(s)	185, 335
BsaAI	YACGTR	1 cut(s)	589
BsaHI	GRCGYC	1 cut(s)	420
BsaJI	CCNNGG	3 cut(s)	1033, 1564, 1794
BsaWI	WCCGGW	1 cut(s)	2089
BsaXI	ACNNNNNCTCC	2 cut(s)	1169, 1199
Bse118I	RCCGGY	5 cut(s)	202, 352, 416, 575, 631
Bse1I	ACTGG	4 cut(s)	934, 1581, 1812, 2483
Bse3DI	GCAATG	3 cut(s)	1122, 1373, 1513
BseAI	TCCGGA	1 cut(s)	2089
BseBI	CCWGG	7 cut(s)	153, 303, 637, 1407, 1836, 1905, 2640
BseDI	CCNNGG	3 cut(s)	1033, 1564, 1794
BseGI	GGATG	6 cut(s)	697, 1366, 1657, 1960, 2098, 2523
BseMI	GCAATG	3 cut(s)	1122, 1373, 1513
BseMII	CTCAG	5 cut(s)	24, 2151, 2153, 2280, 2550
BseNI	ACTGG	4 cut(s)	934, 1581, 1812, 2483
BsePI	GCGCGC	3 cut(s)	5, 236, 386
BseRI	GAGGAG	3 cut(s)	107, 260, 843
BseSI	GKGCMC	1 cut(s)	2732
BseXI	GCAGC	5 cut(s)	988, 1004, 1099, 1228, 2530
BseYI	CCCAGC	2 cut(s)	597, 1108
BsgI	GTGCAG	3 cut(s)	1374, 2201, 2537
Bsh1285I	CGRYCG	1 cut(s)	543
BshFI	GGCC	6 cut(s)	521, 572, 579, 635, 1517, 2232
BshNI	GGYRCC	1 cut(s)	419
BsiEI	CGRYCG	1 cut(s)	543
BsiHKAI	GWGCWC	4 cut(s)	234, 384, 588, 594
BsiHKCI	CYCGRG	1 cut(s)	1603
BslFI	GGGAC	2 cut(s)	167, 317
BsmAI	GTCTC	4 cut(s)	252, 402, 1109, 2142
BsmFI	GGGAC	2 cut(s)	167, 317
BsmI	GAATGC	2 cut(s)	935, 1925
BsnI	GGCC	6 cut(s)	521, 572, 579, 635, 1517, 2232
BsoBI	CYCGRG	1 cut(s)	1603
Bsp119I	TTCGAA	1 cut(s)	1326
Bsp1286I	GDGCHC	7 cut(s)	234, 384, 588, 594, 644, 2378, 2732
Bsp13I	TCCGGA	1 cut(s)	2089
Bsp1720I	GCTNAGC	1 cut(s)	10
Bsp19I	CCATGG	1 cut(s)	1564
BspANI	GGCC	6 cut(s)	521, 572, 579, 635, 1517, 2232
BspCNI	CTCAG	5 cut(s)	23, 2152, 2152, 2281, 2551
BspEI	TCCGGA	1 cut(s)	2089
BspHI	TCATGA	2 cut(s)	1230, 2125
BspLI	GGNNCC	7 cut(s)	207, 357, 421, 641, 1060, 1810, 2233
BspMI	ACCTGC	1 cut(s)	51
BspPI	GGATC	3 cut(s)	1079, 2663, 2729
BspQI	GCTCTTC	1 cut(s)	53
BspT104I	TTCGAA	1 cut(s)	1326
BspT107I	GGYRCC	1 cut(s)	419
BsrBI	CCGCTC	2 cut(s)	255, 405
BsrDI	GCAATG	3 cut(s)	1122, 1373, 1513
BsrFI	RCCGGY	5 cut(s)	202, 352, 416, 575, 631
BsrI	ACTGG	4 cut(s)	934, 1581, 1812, 2483
BssAI	RCCGGY	5 cut(s)	202, 352, 416, 575, 631
BssECI	CCNNGG	3 cut(s)	1033, 1564, 1794
BssHII	GCGCGC	3 cut(s)	5, 236, 386
BssNI	GRCGYC	1 cut(s)	420
BssSI	CACGAG	1 cut(s)	566
BssT1I	CCWWGG	2 cut(s)	1033, 1564
Bst2BI	CACGAG	1 cut(s)	566
Bst2UI	CCWGG	7 cut(s)	153, 303, 637, 1407, 1836, 1905, 2640
Bst6I	CTCTTC	2 cut(s)	53, 132
BstACI	GRCGYC	1 cut(s)	420
BstAPI	GCANNNNNTGC	2 cut(s)	989, 2515
BstBAI	YACGTR	1 cut(s)	589
BstBI	TTCGAA	1 cut(s)	1326
BstDEI	CTNAG	7 cut(s)	10, 2046, 2114, 2139, 2160, 2289, 2559
BstDSI	CCRYGG	2 cut(s)	1564, 1794
BstEII	GGTNACC	1 cut(s)	2245
BstENI	CCTNNNNNAGG	4 cut(s)	1053, 1092, 1594, 2240
BstF5I	GGATG	6 cut(s)	697, 1366, 1657, 1960, 2098, 2523
BstH2I	RGCGCY	1 cut(s)	423
BstMAI	GTCTC	4 cut(s)	252, 402, 1109, 2142
BstMCI	CGRYCG	1 cut(s)	543
BstNI	CCWGG	7 cut(s)	153, 303, 637, 1407, 1836, 1905, 2640
BstNSI	RCATGY	3 cut(s)	2066, 2513, 2535
BstPI	GGTNACC	1 cut(s)	2245
BstSCI	CCNGG	9 cut(s)	151, 183, 301, 333, 635, 1405, 1834, 1903, 2638
BstSFI	CTRYAG	2 cut(s)	1521, 1611
BstSLI	GKGCMC	1 cut(s)	2732
BstV1I	GCAGC	5 cut(s)	988, 1004, 1099, 1228, 2530
BstV2I	GAAGAC	4 cut(s)	496, 656, 2032, 2496
BstX2I	RGATCY	2 cut(s)	1162, 2668
BstYI	RGATCY	2 cut(s)	1162, 2668
BsuRI	GGCC	6 cut(s)	521, 572, 579, 635, 1517, 2232
BtgI	CCRYGG	2 cut(s)	1564, 1794
BtsCI	GGATG	6 cut(s)	697, 1366, 1657, 1960, 2098, 2523
BtsI	GCAGTG	1 cut(s)	1214
BtsIMutI	CAGTG	6 cut(s)	706, 1214, 1903, 2099, 2147, 2701
BveI	ACCTGC	1 cut(s)	51
CciI	TCATGA	2 cut(s)	1230, 2125
Cfr10I	RCCGGY	5 cut(s)	202, 352, 416, 575, 631
Cfr13I	GGNCC	3 cut(s)	1721, 2195, 2231
Cfr42I	CCGCGG	1 cut(s)	1797
CseI	GACGC	2 cut(s)	160, 310
Csp6I	GTAC	6 cut(s)	193, 343, 1186, 1493, 2543, 2716
CspCI	CAANNNNNGTGG	2 cut(s)	1390, 1425
CviQI	GTAC	6 cut(s)	193, 343, 1186, 1493, 2543, 2716
DdeI	CTNAG	7 cut(s)	10, 2046, 2114, 2139, 2160, 2289, 2559
DinI	GGCGCC	1 cut(s)	421
DraIII	CACNNNGTG	2 cut(s)	959, 1898
DriI	GACNNNNNGTC	1 cut(s)	2134
EaeI	YGGCCR	4 cut(s)	570, 577, 633, 1515
Eam1104I	CTCTTC	2 cut(s)	53, 132
Eam1105I	GACNNNNNGTC	1 cut(s)	2134
EarI	CTCTTC	2 cut(s)	53, 132
EciI	GGCGGA	3 cut(s)	86, 1051, 1150
Ecl136II	GAGCTC	2 cut(s)	232, 382
Eco130I	CCWWGG	2 cut(s)	1033, 1564
Eco24I	GRGCYC	4 cut(s)	234, 384, 644, 2378
Eco32I	GATATC	3 cut(s)	842, 1866, 2110
Eco47I	GGWCC	2 cut(s)	1721, 2195
Eco53kI	GAGCTC	2 cut(s)	232, 382
Eco57I	CTGAAG	1 cut(s)	1151
Eco72I	CACGTG	1 cut(s)	589
Eco88I	CYCGRG	1 cut(s)	1603
Eco91I	GGTNACC	1 cut(s)	2245
EcoICRI	GAGCTC	2 cut(s)	232, 382
EcoNI	CCTNNNNNAGG	4 cut(s)	1053, 1092, 1594, 2240
EcoO65I	GGTNACC	1 cut(s)	2245
EcoRI	GAATTC	3 cut(s)	212, 362, 1014
EcoRII	CCWGG	7 cut(s)	151, 301, 635, 1405, 1834, 1903, 2638
EcoRV	GATATC	3 cut(s)	842, 1866, 2110
EcoT14I	CCWWGG	2 cut(s)	1033, 1564
EcoT38I	GRGCYC	4 cut(s)	234, 384, 644, 2378
EgeI	GGCGCC	1 cut(s)	421
EheI	GGCGCC	1 cut(s)	421
ErhI	CCWWGG	2 cut(s)	1033, 1564
FalI	AAGNNNNNCTT	2 cut(s)	1980, 2012
FaqI	GGGAC	2 cut(s)	167, 317
FauI	CCCGC	1 cut(s)	266
FauNDI	CATATG	1 cut(s)	1666
FbaI	TGATCA	2 cut(s)	1468, 2349
FblI	GTMKAC	2 cut(s)	1782, 1875
Fnu4HI	GCNGC	9 cut(s)	200, 350, 573, 993, 1002, 1113, 1242, 1518, 2519
FokI	GGATG	6 cut(s)	704, 1373, 1664, 1947, 2105, 2510
FriOI	GRGCYC	4 cut(s)	234, 384, 644, 2378
Fsp4HI	GCNGC	9 cut(s)	200, 350, 573, 993, 1002, 1113, 1242, 1518, 2519
FspBI	CTAG	6 cut(s)	866, 957, 1034, 1173, 1544, 1968
GluI	GCNGC	9 cut(s)	200, 350, 573, 993, 1002, 1113, 1242, 1518, 2519
GsaI	CCCAGC	2 cut(s)	601, 1112
HaeII	RGCGCY	1 cut(s)	423
HaeIII	GGCC	6 cut(s)	521, 572, 579, 635, 1517, 2232
HgaI	GACGC	2 cut(s)	160, 310
Hin1I	GRCGYC	1 cut(s)	420
HindIII	AAGCTT	1 cut(s)	1994
HinfI	GANTC	7 cut(s)	461, 477, 501, 535, 545, 1531, 2645
HphI	GGTGA	8 cut(s)	43, 166, 316, 1049, 1109, 2239, 2402, 2411
Hpy166II	GTNNAC	7 cut(s)	697, 962, 1559, 1783, 1876, 2099, 2402
Hpy188I	TCNGA	5 cut(s)	540, 846, 976, 2290, 2663
Hpy8I	GTNNAC	7 cut(s)	697, 962, 1559, 1783, 1876, 2099, 2402
Hpy99I	CGWCG	1 cut(s)	458
HpyCH4IV	ACGT	3 cut(s)	588, 1477, 2451
HpyF3I	CTNAG	7 cut(s)	10, 2046, 2114, 2139, 2160, 2289, 2559
HpySE526I	ACGT	3 cut(s)	588, 1477, 2451
Hsp92I	GRCGYC	1 cut(s)	420
KasI	GGCGCC	1 cut(s)	419
Kpn2I	TCCGGA	1 cut(s)	2089
KroI	GCCGGC	5 cut(s)	202, 352, 416, 575, 631
KroNI	GCCGGC	5 cut(s)	204, 354, 418, 577, 633
Ksp22I	TGATCA	2 cut(s)	1468, 2349
KspI	CCGCGG	1 cut(s)	1797
LguI	GCTCTTC	1 cut(s)	53
LmnI	GCTCC	9 cut(s)	19, 211, 260, 361, 410, 639, 859, 1064, 1396
Lsp1109I	GCAGC	5 cut(s)	988, 1004, 1099, 1228, 2530
LweI	GCATC	4 cut(s)	321, 1221, 1917, 2532
MaeI	CTAG	6 cut(s)	866, 957, 1034, 1173, 1544, 1968
MaeII	ACGT	3 cut(s)	588, 1477, 2451
MaeIII	GTNAC	7 cut(s)	163, 172, 322, 701, 2032, 2245, 2292
MbiI	CCGCTC	2 cut(s)	255, 405
MflI	RGATCY	2 cut(s)	1162, 2668
MhlI	GDGCHC	7 cut(s)	234, 384, 588, 594, 644, 2378, 2732
Mly113I	GGCGCC	1 cut(s)	420
MlyI	GAGTC	4 cut(s)	510, 544, 554, 1525
MmeI	TCCRAC	4 cut(s)	563, 1342, 2085, 2724
MroI	TCCGGA	1 cut(s)	2089
MroNI	GCCGGC	5 cut(s)	202, 352, 416, 575, 631
MroXI	GAANNNNTTC	1 cut(s)	476
MseI	TTAA	7 cut(s)	1296, 1623, 1847, 1854, 1953, 2016, 2585
MslI	CAYNNNNRTG	2 cut(s)	2427, 2553
MspA1I	CMGCKG	3 cut(s)	1112, 1346, 1796
MspR9I	CCNGG	9 cut(s)	153, 185, 303, 335, 637, 1407, 1836, 1905, 2640
Mva1269I	GAATGC	2 cut(s)	935, 1925
MvaI	CCWGG	7 cut(s)	153, 303, 637, 1407, 1836, 1905, 2640
NaeI	GCCGGC	5 cut(s)	204, 354, 418, 577, 633
NarI	GGCGCC	1 cut(s)	420
NciI	CCSGG	2 cut(s)	185, 335
NcoI	CCATGG	1 cut(s)	1564
NdeI	CATATG	1 cut(s)	1666
NgoMIV	GCCGGC	5 cut(s)	202, 352, 416, 575, 631
NlaIV	GGNNCC	7 cut(s)	207, 357, 421, 641, 1060, 1810, 2233
NmeAIII	GCCGAG	2 cut(s)	573, 640
NmuCI	GTSAC	5 cut(s)	163, 172, 322, 701, 2245
NspI	RCATGY	3 cut(s)	2066, 2513, 2535
NspV	TTCGAA	1 cut(s)	1326
OliI	CACNNNNGTG	1 cut(s)	2427
PaeI	GCATGC	1 cut(s)	2066
PagI	TCATGA	2 cut(s)	1230, 2125
PaqCI	CACCTGC	1 cut(s)	51
PauI	GCGCGC	3 cut(s)	5, 236, 386
PciSI	GCTCTTC	1 cut(s)	53
PcsI	WCGNNNNNNNCGW	1 cut(s)	618
PctI	GAATGC	2 cut(s)	935, 1925
PdiI	GCCGGC	5 cut(s)	204, 354, 418, 577, 633
PdmI	GAANNNNTTC	1 cut(s)	476
PfeI	GAWTC	3 cut(s)	461, 477, 2645
PflFI	GACNNNGTC	2 cut(s)	544, 2495
PflMI	CCANNNNNTGG	1 cut(s)	940
PkrI	GCNGC	9 cut(s)	201, 351, 574, 994, 1003, 1114, 1243, 1519, 2520
PleI	GAGTC	4 cut(s)	509, 543, 553, 1525
PluTI	GGCGCC	1 cut(s)	423
PmaCI	CACGTG	1 cut(s)	589
PmlI	CACGTG	1 cut(s)	589
PpsI	GAGTC	4 cut(s)	509, 543, 553, 1525
Ppu21I	YACGTR	1 cut(s)	589
PshBI	ATTAAT	1 cut(s)	1623
PsiI	TTATAA	2 cut(s)	1157, 1977
Psp124BI	GAGCTC	2 cut(s)	234, 384
Psp6I	CCWGG	7 cut(s)	151, 301, 635, 1405, 1834, 1903, 2638
PspCI	CACGTG	1 cut(s)	589
PspEI	GGTNACC	1 cut(s)	2245
PspFI	CCCAGC	2 cut(s)	597, 1108
PspGI	CCWGG	7 cut(s)	151, 301, 635, 1405, 1834, 1903, 2638
PspN4I	GGNNCC	7 cut(s)	207, 357, 421, 641, 1060, 1810, 2233
PspPI	GGNCC	3 cut(s)	1721, 2195, 2231
PsrI	GAACNNNNNNTAC	2 cut(s)	2394, 2426
PsuI	RGATCY	2 cut(s)	1162, 2668
PsyI	GACNNNGTC	2 cut(s)	544, 2495
PteI	GCGCGC	3 cut(s)	5, 236, 386
PvuII	CAGCTG	2 cut(s)	1112, 1346
RsaI	GTAC	6 cut(s)	194, 344, 1187, 1494, 2544, 2717
RsaNI	GTAC	6 cut(s)	193, 343, 1186, 1493, 2543, 2716
RseI	CAYNNNNRTG	2 cut(s)	2427, 2553
SacI	GAGCTC	2 cut(s)	234, 384
SacII	CCGCGG	1 cut(s)	1797
SapI	GCTCTTC	1 cut(s)	53
SaqAI	TTAA	7 cut(s)	1296, 1623, 1847, 1854, 1953, 2016, 2585
SatI	GCNGC	9 cut(s)	200, 350, 573, 993, 1002, 1113, 1242, 1518, 2519
Sau96I	GGNCC	3 cut(s)	1721, 2195, 2231
SchI	GAGTC	4 cut(s)	510, 544, 554, 1525
ScrFI	CCNGG	9 cut(s)	153, 185, 303, 335, 637, 1407, 1836, 1905, 2640
SduI	GDGCHC	7 cut(s)	234, 384, 588, 594, 644, 2378, 2732
SfaNI	GCATC	4 cut(s)	321, 1221, 1917, 2532
SfcI	CTRYAG	2 cut(s)	1521, 1611
SfoI	GGCGCC	1 cut(s)	421
Sfr303I	CCGCGG	1 cut(s)	1797
SfuI	TTCGAA	1 cut(s)	1326
SgrBI	CCGCGG	1 cut(s)	1797
SinI	GGWCC	2 cut(s)	1721, 2195
SmiMI	CAYNNNNRTG	2 cut(s)	2427, 2553
SmlI	CTYRAG	4 cut(s)	242, 392, 996, 2377
SmoI	CTYRAG	4 cut(s)	242, 392, 996, 2377
SphI	GCATGC	1 cut(s)	2066
SspDI	GGCGCC	1 cut(s)	419
SspI	AATATT	2 cut(s)	1936, 2737
SspMI	CTAG	6 cut(s)	866, 957, 1034, 1173, 1544, 1968
SstI	GAGCTC	2 cut(s)	234, 384
StyD4I	CCNGG	9 cut(s)	151, 183, 301, 333, 635, 1405, 1834, 1903, 2638
StyI	CCWWGG	2 cut(s)	1033, 1564
TaiI	ACGT	3 cut(s)	591, 1480, 2454
TaqI	TCGA	8 cut(s)	216, 222, 366, 372, 453, 875, 1306, 1326
TaqII	GACCGA	1 cut(s)	557
TatI	WGTACW	2 cut(s)	1185, 2542
TauI	GCSGC	4 cut(s)	202, 352, 575, 1520
TfiI	GAWTC	3 cut(s)	461, 477, 2645
Tru1I	TTAA	7 cut(s)	1296, 1623, 1847, 1854, 1953, 2016, 2585
Tru9I	TTAA	7 cut(s)	1296, 1623, 1847, 1854, 1953, 2016, 2585
TscAI	CASTG	6 cut(s)	706, 1214, 1903, 2106, 2147, 2701
TseFI	GTSAC	5 cut(s)	163, 172, 322, 701, 2245
TseI	GCWGC	5 cut(s)	992, 1001, 1112, 1241, 2518
Tsp45I	GTSAC	5 cut(s)	163, 172, 322, 701, 2245
TspDTI	ATGAA	4 cut(s)	771, 938, 1272, 2642
TspGWI	ACGGA	2 cut(s)	471, 1113
TspRI	CASTG	6 cut(s)	706, 1214, 1903, 2106, 2147, 2701
Tth111I	GACNNNGTC	2 cut(s)	544, 2495
Van91I	CCANNNNNTGG	1 cut(s)	940
VpaK11BI	GGWCC	2 cut(s)	1721, 2195
VspI	ATTAAT	1 cut(s)	1623
XagI	CCTNNNNNAGG	4 cut(s)	1053, 1092, 1594, 2240
XapI	RAATTY	9 cut(s)	212, 362, 790, 945, 1014, 1041, 1703, 2188, 2482
XbaI	TCTAGA	1 cut(s)	1967
XceI	RCATGY	3 cut(s)	2066, 2513, 2535
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2090
XmaJI	CCTAGG	1 cut(s)	1033
XmiI	GTMKAC	2 cut(s)	1782, 1875
XmnI	GAANNNNTTC	1 cut(s)	476
XspI	CTAG	6 cut(s)	866, 957, 1034, 1173, 1544, 1968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.