Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0005831

Physical Location & Seq

Genomic Coordinates Reverse (-)

60683163 .. 60688872

Gene Structure 5710 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G032410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGGCGCGCTCAGCTCCAATTCTCAACCGCGACACCTCGCACCTGCTCTTCACCTTCAAACCTCCCCACTCTCCCTTCCACTCTCTCACTTCTCTCCGCCTCACCAAGCCTACTCTCCTCCCTACTCTTCTATCTTCTTCTTCTTCGCCTGGTTCTTGTGTCACGCGCGTCACCACCGTCCCGGTAGAGTACGCGCCGCCGGCTCCCGAATTCGAGTTCGACAGCGAGCTCGCGCGCCTCAAGTCTCTCCGCTCCCGCGTCGCCGGCGCCAAATCGCTACGCGCCAAAACCAGAGTGATCGACGGAGATTCCAGAGTGAAAAGATTCTTCAATTCCGGCAACAACCGAGTCTTCTCTGCGGTTTTGGCCTCGCTGGATTTGAGTCCGACCGAGTTGTTCTTGTTCAAGTGCCTCGTCGCCGCCGGACAAGAGCACGTGCTCGGCTGGGGGTTTGAGTTCGCCGAGAGCGAGGCGGAGCCGGCCAGGAGCCCCGTGAAGACCGCGTTTTACGCCATTGTAGAAATGATTGAGAAATTGGATGTGAACAGTGACGGTTCGGGGAAGAAGAAGAAGAAGAAGAAGGTTCGGTTTGCTTTGAATGATGAAGATTTTGAGGACTTGAAGAAGCTATTGAAGAATTTGGGAGAGATTGAACAGTTCTATAACTGCATTGGAGGAGTGATTGGATATCAGATAACAGTAATGGAGCTTCTAGCGCAATCGAGAGTTGAAATGCAGGCTACAAATTGGTATAACAACATACAAGAGCAGATGGAATGCCAGTTTTTGGAAATTCATGCACCTAGTGGACTTGATCTTTCTGAAAATGCAGAATATGCAGCTCAAGCTGCTCTATGGGGAATTCAGGGTTTGCCAGACCTAGGTGAAATTTATCCTCTGGGAGGCTCCGCCGACAGGCTTGGTTTGGTTGATCCTGATACAGGTGAATGTCTCCCAGCTGCAATGCTTCCGTATTGTGGGCGGACTTTATTGGAAGGTCTTATAAGAGATCTTCAGGCTAGGGAGTTTTTGTACTTCAAGATTTTTGGGAAGCAGTGCATCACTCCTGTTGCTATCATGACAAGTGCTGCAAAGAACAACCATGAACACATAACTTCTCTTTGTGAAAAACTTGAATGGTTTAAGAGAGGTCGATCAAGTTTCCAACTTTTCGAACAGCCCCTTGTTCCAGCTGTTAGTGCAGAGGATGGGCAATGGATAATCAAGAAACCTTTTGCTCCCATTTGCAAGCCTGGTGGTCATGGTGTGATATGGAAACTTGCTTATGATAAAGGCATTTTCCAATGGTTTTATGATCATGGACGTAAAGGTGCAACTGTACGACAAGTTAGCAATGTTGTGGCCGCTACAGATTTGACTCTCTTGGCACTAGCAGGGATTGGTTTACACCATGGGAAGAAACTGGGGTTTGCTTCCTGTAAGAGGAACTCGGGGGCTACAGAAGGAATTAATGTTCTAATGGAGAAGAAAAATCTGGATGGAAGGTGGGCATATGGTTTGTCTTGCATTGAATACACAGAGTTTGATAAATTTGGGATAGCAGATGGACCTCATTCTCGTAATAGGTTGCAGGCAGAGTTCCCTGCCAATACAAACATTTTGTATGTAGACTTACCTTCCGCGGAGTTGGTGGGTTCCAGTAAGAATACAGACAGCTTACCTGGCATGGTTGTTCCTGGTGGCAGGCTTGAATGCACGATGCAAAATATTGCCGACAATTTTCTTAATACACATCCATCTAGAGATTATAAAGGCATTGAAGATAAGCTTGATACCTTTATTGTTTTTAATAAAAGAAGACGGGTTACATCATCTACTAAGAGGAAAAGAAGGCATGCAGACAAATCTTTACACCAAACTCCGGATGGTTCACTGTTGGATATCCTAAGAAATGCTCATGACCTTCTGTCTCAGTGTGATATTCAACTTCCTGAGATTGGAAGTAATGACAAGTATCTAAATTCTGGACCACCATTTCTTATTCTTCTGCACCCTGCTCTTGGCCCCCTTTGGGAGGTCACCAGACAAAAGTTCTGTGGAGGCTCAATATGCAAAGGCTCTGAGTTACAAGTAGAGGTCGCAGAGTTCCTGTGGAGGAATGTTCAGCTTGATGGAAGCCTGATCATAGAGGCTGATAATGTTATGGGCTCAAGTAGGGTTGGTGAAGATGGTGAACCTATTTTACAATATGGACACAGGTGTGGAAGGTGTAAATTACAGAACGTAAGAGTATTGAATGAGGGAATTGACTGGAATTTTGAAGACAATGTCTATTGGAAGCATGTTGTGCAGCGCATCCAAGCATGTAAGGTTGTACTGCATGGAAATGCTGAGTTTGAGGCAACTGATGTTATCTTAAAGGGAAATCATATATTTGAAGTTCCAAATGGCTACAAAATGAAGATCACGCCAGGAGATTCAGGTTTAGCGATCGGATTAGATCCTATCGCAGAGAATATGATGGACAGTGGAAGCTGGTATTGGAAGTACGGGATCAAGGGCACAAATATTCAGTTGGAATTGGTAGAGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003983 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006011 GO:0006082 GO:0006139 GO:0006629 GO:0006725 GO:0006790 GO:0006793 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009225 GO:0009226 GO:0009507 GO:0009536 GO:0009987 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046505 GO:0046506 GO:0051748 GO:0055086 GO:0070569 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGP

Protein Analysis

851

Amino Acids

94.64

Weight (kDa)

6.74

Isoelectric Point (pI)

46.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Hexapep_UGP3_C	PF25441	685 - 848	1.4e-74	UGP3-like, C-terminal hexapeptide repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005831)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56040
fragaria_vesca	FvH4_7g24830 FvH4_7g24830 FvH4_7g24830 FvH4_7g24830 FvH4_7g24830 FvH4_7g24830 FvH4_7g24830
malus_domestica	MD01G1156200.v1.1 MD01G1156300.v1.1 MD07G1224900.v1.1
prunus_persica	Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1 Prupe.2G253500_v2.0.a1
pyrus_communis	pycom07g20360
rosa_chinensis	RchiOBHm_Chr1g0370701
rosa_laevigata	RLG00000027016
rosa_multiflora	Rmu_sc0004550.1_g000012
rosa_roxburghii	Rroxscaffold_4G00286290
rosa_rugosa	Rorug01G0358600
rosa_samantha	Rh1AG368300 Rh1BG331700 Rh1CG345700 Rh1DG363100
rosa_wichuraiana	Rw1G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1004, 1770
AarI	CACCTGC	1 cut(s)	51
Acc36I	ACCTGC	1 cut(s)	51
AccB1I	GGYRCC	1 cut(s)	266
AccB7I	CCANNNNNTGG	1 cut(s)	787
AccBSI	CCGCTC	1 cut(s)	252
AccI	GTMKAC	1 cut(s)	1629
AccIII	TCCGGA	1 cut(s)	1882
AclWI	GGATC	3 cut(s)	926, 2456, 2522
AcoI	YGGCCR	2 cut(s)	480, 1362
AcsI	RAATTY	8 cut(s)	209, 637, 792, 861, 888, 1550, 1981, 2275
AcuI	CTGAAG	1 cut(s)	998
AcvI	CACGTG	1 cut(s)	436
AcyI	GRCGYC	1 cut(s)	267
AdeI	CACNNNGTG	1 cut(s)	806
AfaI	GTAC	5 cut(s)	191, 1034, 1341, 2337, 2510
AhdI	GACNNNNNGTC	1 cut(s)	1927
AjnI	CCWGG	6 cut(s)	148, 482, 1252, 1681, 1696, 2431
AjuI	GAANNNNNNNTTGG	2 cut(s)	2485, 2517
AleI	CACNNNNGTG	1 cut(s)	2220
AloI	GAACNNNNNNTCC	2 cut(s)	1458, 1490
Alw21I	GWGCWC	3 cut(s)	231, 435, 441
Alw26I	GTCTC	3 cut(s)	249, 956, 1935
AlwI	GGATC	3 cut(s)	926, 2456, 2522
Ama87I	CYCGRG	1 cut(s)	1450
Aor13HI	TCCGGA	1 cut(s)	1882
AoxI	GGCC	4 cut(s)	366, 480, 1362, 2023
ApeKI	GCWGC	5 cut(s)	839, 848, 959, 1088, 2311
ApoI	RAATTY	8 cut(s)	209, 637, 792, 861, 888, 1550, 1981, 2275
ArsI	GACNNNNNNTTYG	2 cut(s)	2261, 2293
AseI	ATTAAT	1 cut(s)	1470
Asp700I	GAANNNNTTC	1 cut(s)	323
AspA2I	CCTAGG	1 cut(s)	880
AspS9I	GGNCC	3 cut(s)	1568, 1988, 2024
AsuC2I	CCSGG	1 cut(s)	182
AsuHPI	GGTGA	8 cut(s)	43, 94, 163, 896, 956, 2032, 2195, 2204
AsuII	TTCGAA	1 cut(s)	1173
AvaI	CYCGRG	1 cut(s)	1450
AvaII	GGWCC	2 cut(s)	1568, 1988
AvrII	CCTAGG	1 cut(s)	880
BaeGI	GKGCMC	1 cut(s)	2525
BanI	GGYRCC	1 cut(s)	266
BanII	GRGCYC	3 cut(s)	231, 491, 2171
BarI	GAAGNNNNNNTAC	4 cut(s)	693, 725, 1810, 1842
BbrPI	CACGTG	1 cut(s)	436
BbsI	GAAGAC	4 cut(s)	343, 503, 1825, 2289
Bbv12I	GWGCWC	3 cut(s)	231, 435, 441
BbvI	GCAGC	5 cut(s)	835, 851, 946, 1075, 2323
BccI	CCATC	9 cut(s)	766, 1202, 1493, 1559, 1765, 1880, 2126, 2183, 2476
BciT130I	CCWGG	6 cut(s)	150, 484, 1254, 1683, 1698, 2433
BclI	TGATCA	2 cut(s)	1315, 2142
BcnI	CCSGG	1 cut(s)	182
BcoDI	GTCTC	3 cut(s)	249, 956, 1935
BfaI	CTAG	6 cut(s)	713, 804, 881, 1020, 1391, 1761
BfmI	CTRYAG	2 cut(s)	1368, 1458
BfoI	RGCGCY	1 cut(s)	270
BfuAI	ACCTGC	1 cut(s)	51
BglII	AGATCT	1 cut(s)	1009
BisI	GCNGC	8 cut(s)	197, 420, 840, 849, 960, 1089, 1365, 2312
BlnI	CCTAGG	1 cut(s)	880
BlpI	GCTNAGC	1 cut(s)	10
BlsI	GCNGC	8 cut(s)	198, 421, 841, 850, 961, 1090, 1366, 2313
Bme1390I	CCNGG	7 cut(s)	150, 182, 484, 1254, 1683, 1698, 2433
Bme18I	GGWCC	2 cut(s)	1568, 1988
BmeRI	GACNNNNNGTC	1 cut(s)	1927
BmeT110I	CYCGRG	1 cut(s)	1450
BmgT120I	GGNCC	3 cut(s)	1568, 1988, 2024
BmiI	GGNNCC	7 cut(s)	204, 268, 477, 488, 907, 1657, 2026
BmrFI	CCNGG	7 cut(s)	150, 182, 484, 1254, 1683, 1698, 2433
BmrI	ACTGGG	1 cut(s)	1433
BmsI	GCATC	3 cut(s)	1068, 1710, 2325
BmuI	ACTGGG	1 cut(s)	1433
BpiI	GAAGAC	4 cut(s)	343, 503, 1825, 2289
Bpu1102I	GCTNAGC	1 cut(s)	10
Bpu14I	TTCGAA	1 cut(s)	1173
BpuEI	CTTGAG	3 cut(s)	224, 828, 2155
BpuMI	CCSGG	1 cut(s)	182
BsaAI	YACGTR	1 cut(s)	436
BsaHI	GRCGYC	1 cut(s)	267
BsaJI	CCNNGG	3 cut(s)	880, 1411, 1641
BsaWI	WCCGGW	1 cut(s)	1882
BsaXI	ACNNNNNCTCC	2 cut(s)	1016, 1046
Bse118I	RCCGGY	3 cut(s)	199, 263, 478
Bse1I	ACTGG	4 cut(s)	781, 1428, 1659, 2276
Bse3DI	GCAATG	3 cut(s)	969, 1220, 1360
BseAI	TCCGGA	1 cut(s)	1882
BseBI	CCWGG	6 cut(s)	150, 484, 1254, 1683, 1698, 2433
BseDI	CCNNGG	3 cut(s)	880, 1411, 1641
BseGI	GGATG	6 cut(s)	544, 1213, 1504, 1753, 1891, 2316
BseMI	GCAATG	3 cut(s)	969, 1220, 1360
BseMII	CTCAG	5 cut(s)	24, 1944, 1946, 2073, 2343
BseNI	ACTGG	4 cut(s)	781, 1428, 1659, 2276
BsePI	GCGCGC	2 cut(s)	5, 233
BseRI	GAGGAG	2 cut(s)	107, 690
BseSI	GKGCMC	1 cut(s)	2525
BseXI	GCAGC	5 cut(s)	835, 851, 946, 1075, 2323
BseYI	CCCAGC	2 cut(s)	444, 955
BsgI	GTGCAG	3 cut(s)	1221, 1994, 2330
Bsh1285I	CGRYCG	2 cut(s)	390, 2454
BshFI	GGCC	4 cut(s)	368, 482, 1364, 2025
BshNI	GGYRCC	1 cut(s)	266
BsiEI	CGRYCG	2 cut(s)	390, 2454
BsiHKAI	GWGCWC	3 cut(s)	231, 435, 441
BsiHKCI	CYCGRG	1 cut(s)	1450
BsiSI	CCGG	7 cut(s)	182, 200, 264, 336, 423, 479, 1883
BslFI	GGGAC	1 cut(s)	164
BsmAI	GTCTC	3 cut(s)	249, 956, 1935
BsmFI	GGGAC	1 cut(s)	164
BsmI	GAATGC	2 cut(s)	782, 1718
BsnI	GGCC	4 cut(s)	368, 482, 1364, 2025
BsoBI	CYCGRG	1 cut(s)	1450
Bsp119I	TTCGAA	1 cut(s)	1173
Bsp1286I	GDGCHC	6 cut(s)	231, 435, 441, 491, 2171, 2525
Bsp13I	TCCGGA	1 cut(s)	1882
Bsp1720I	GCTNAGC	1 cut(s)	10
Bsp19I	CCATGG	1 cut(s)	1411
BspANI	GGCC	4 cut(s)	368, 482, 1364, 2025
BspCNI	CTCAG	5 cut(s)	23, 1945, 1945, 2074, 2344
BspEI	TCCGGA	1 cut(s)	1882
BspHI	TCATGA	2 cut(s)	1077, 1918
BspLI	GGNNCC	7 cut(s)	204, 268, 477, 488, 907, 1657, 2026
BspMI	ACCTGC	1 cut(s)	51
BspPI	GGATC	3 cut(s)	926, 2456, 2522
BspQI	GCTCTTC	1 cut(s)	53
BspT104I	TTCGAA	1 cut(s)	1173
BspT107I	GGYRCC	1 cut(s)	266
BsrBI	CCGCTC	1 cut(s)	252
BsrDI	GCAATG	3 cut(s)	969, 1220, 1360
BsrFI	RCCGGY	3 cut(s)	199, 263, 478
BsrI	ACTGG	4 cut(s)	781, 1428, 1659, 2276
BssAI	RCCGGY	3 cut(s)	199, 263, 478
BssECI	CCNNGG	3 cut(s)	880, 1411, 1641
BssHII	GCGCGC	2 cut(s)	5, 233
BssNI	GRCGYC	1 cut(s)	267
BssT1I	CCWWGG	2 cut(s)	880, 1411
Bst2UI	CCWGG	6 cut(s)	150, 484, 1254, 1683, 1698, 2433
Bst4CI	ACNGT	8 cut(s)	178, 548, 554, 657, 700, 1339, 1896, 2489
Bst6I	CTCTTC	2 cut(s)	53, 132
BstACI	GRCGYC	1 cut(s)	267
BstAPI	GCANNNNNTGC	2 cut(s)	836, 2308
BstBAI	YACGTR	1 cut(s)	436
BstBI	TTCGAA	1 cut(s)	1173
BstDEI	CTNAG	7 cut(s)	10, 1839, 1907, 1932, 1953, 2082, 2352
BstDSI	CCRYGG	2 cut(s)	1411, 1641
BstEII	GGTNACC	1 cut(s)	2038
BstENI	CCTNNNNNAGG	4 cut(s)	900, 939, 1441, 2033
BstF5I	GGATG	6 cut(s)	544, 1213, 1504, 1753, 1891, 2316
BstH2I	RGCGCY	1 cut(s)	270
BstMAI	GTCTC	3 cut(s)	249, 956, 1935
BstMCI	CGRYCG	2 cut(s)	390, 2454
BstNI	CCWGG	6 cut(s)	150, 484, 1254, 1683, 1698, 2433
BstNSI	RCATGY	3 cut(s)	1859, 2306, 2328
BstPI	GGTNACC	1 cut(s)	2038
BstSCI	CCNGG	7 cut(s)	148, 180, 482, 1252, 1681, 1696, 2431
BstSFI	CTRYAG	2 cut(s)	1368, 1458
BstSLI	GKGCMC	1 cut(s)	2525
BstV1I	GCAGC	5 cut(s)	835, 851, 946, 1075, 2323
BstV2I	GAAGAC	4 cut(s)	343, 503, 1825, 2289
BstX2I	RGATCY	2 cut(s)	1009, 2461
BstYI	RGATCY	2 cut(s)	1009, 2461
BsuRI	GGCC	4 cut(s)	368, 482, 1364, 2025
BtgI	CCRYGG	2 cut(s)	1411, 1641
BtsCI	GGATG	6 cut(s)	544, 1213, 1504, 1753, 1891, 2316
BtsI	GCAGTG	1 cut(s)	1061
BtsIMutI	CAGTG	5 cut(s)	553, 1061, 1892, 1940, 2494
BveI	ACCTGC	1 cut(s)	51
CciI	TCATGA	2 cut(s)	1077, 1918
Cfr10I	RCCGGY	3 cut(s)	199, 263, 478
Cfr13I	GGNCC	3 cut(s)	1568, 1988, 2024
Cfr42I	CCGCGG	1 cut(s)	1644
CseI	GACGC	2 cut(s)	157, 247
Csp6I	GTAC	5 cut(s)	190, 1033, 1340, 2336, 2509
CspCI	CAANNNNNGTGG	2 cut(s)	1237, 1272
CviQI	GTAC	5 cut(s)	190, 1033, 1340, 2336, 2509
DdeI	CTNAG	7 cut(s)	10, 1839, 1907, 1932, 1953, 2082, 2352
DinI	GGCGCC	1 cut(s)	268
DraIII	CACNNNGTG	1 cut(s)	806
DriI	GACNNNNNGTC	1 cut(s)	1927
EaeI	YGGCCR	2 cut(s)	480, 1362
Eam1104I	CTCTTC	2 cut(s)	53, 132
Eam1105I	GACNNNNNGTC	1 cut(s)	1927
EarI	CTCTTC	2 cut(s)	53, 132
EciI	GGCGGA	4 cut(s)	86, 488, 898, 997
Ecl136II	GAGCTC	1 cut(s)	229
Eco130I	CCWWGG	2 cut(s)	880, 1411
Eco24I	GRGCYC	3 cut(s)	231, 491, 2171
Eco32I	GATATC	2 cut(s)	689, 1903
Eco47I	GGWCC	2 cut(s)	1568, 1988
Eco53kI	GAGCTC	1 cut(s)	229
Eco57I	CTGAAG	1 cut(s)	998
Eco72I	CACGTG	1 cut(s)	436
Eco88I	CYCGRG	1 cut(s)	1450
Eco91I	GGTNACC	1 cut(s)	2038
EcoICRI	GAGCTC	1 cut(s)	229
EcoNI	CCTNNNNNAGG	4 cut(s)	900, 939, 1441, 2033
EcoO65I	GGTNACC	1 cut(s)	2038
EcoRI	GAATTC	2 cut(s)	209, 861
EcoRII	CCWGG	6 cut(s)	148, 482, 1252, 1681, 1696, 2431
EcoRV	GATATC	2 cut(s)	689, 1903
EcoT14I	CCWWGG	2 cut(s)	880, 1411
EcoT38I	GRGCYC	3 cut(s)	231, 491, 2171
EgeI	GGCGCC	1 cut(s)	268
EheI	GGCGCC	1 cut(s)	268
ErhI	CCWWGG	2 cut(s)	880, 1411
FalI	AAGNNNNNCTT	2 cut(s)	1773, 1805
FaqI	GGGAC	1 cut(s)	164
FauI	CCCGC	1 cut(s)	263
FauNDI	CATATG	1 cut(s)	1513
FbaI	TGATCA	2 cut(s)	1315, 2142
FblI	GTMKAC	1 cut(s)	1629
Fnu4HI	GCNGC	8 cut(s)	197, 420, 840, 849, 960, 1089, 1365, 2312
FokI	GGATG	6 cut(s)	551, 1220, 1511, 1740, 1898, 2303
FriOI	GRGCYC	3 cut(s)	231, 491, 2171
Fsp4HI	GCNGC	8 cut(s)	197, 420, 840, 849, 960, 1089, 1365, 2312
FspBI	CTAG	6 cut(s)	713, 804, 881, 1020, 1391, 1761
GluI	GCNGC	8 cut(s)	197, 420, 840, 849, 960, 1089, 1365, 2312
GsaI	CCCAGC	2 cut(s)	448, 959
HaeII	RGCGCY	1 cut(s)	270
HaeIII	GGCC	4 cut(s)	368, 482, 1364, 2025
HapII	CCGG	7 cut(s)	182, 200, 264, 336, 423, 479, 1883
HgaI	GACGC	2 cut(s)	157, 247
Hin1I	GRCGYC	1 cut(s)	267
HindIII	AAGCTT	1 cut(s)	1787
HinfI	GANTC	6 cut(s)	308, 324, 348, 382, 1378, 2438
HpaII	CCGG	7 cut(s)	182, 200, 264, 336, 423, 479, 1883
HphI	GGTGA	8 cut(s)	43, 94, 163, 896, 956, 2032, 2195, 2204
Hpy166II	GTNNAC	6 cut(s)	544, 809, 1406, 1630, 1892, 2195
Hpy188I	TCNGA	5 cut(s)	387, 693, 823, 2083, 2456
Hpy8I	GTNNAC	6 cut(s)	544, 809, 1406, 1630, 1892, 2195
Hpy99I	CGWCG	3 cut(s)	263, 305, 419
HpyCH4III	ACNGT	8 cut(s)	178, 548, 554, 657, 700, 1339, 1896, 2489
HpyCH4IV	ACGT	3 cut(s)	435, 1324, 2244
HpyF3I	CTNAG	7 cut(s)	10, 1839, 1907, 1932, 1953, 2082, 2352
HpySE526I	ACGT	3 cut(s)	435, 1324, 2244
Hsp92I	GRCGYC	1 cut(s)	267
KasI	GGCGCC	1 cut(s)	266
Kpn2I	TCCGGA	1 cut(s)	1882
KroI	GCCGGC	3 cut(s)	199, 263, 478
KroNI	GCCGGC	3 cut(s)	201, 265, 480
Ksp22I	TGATCA	2 cut(s)	1315, 2142
KspI	CCGCGG	1 cut(s)	1644
LguI	GCTCTTC	1 cut(s)	53
LmnI	GCTCC	8 cut(s)	19, 208, 257, 475, 486, 706, 911, 1243
Lsp1109I	GCAGC	5 cut(s)	835, 851, 946, 1075, 2323
LweI	GCATC	3 cut(s)	1068, 1710, 2325
MaeI	CTAG	6 cut(s)	713, 804, 881, 1020, 1391, 1761
MaeII	ACGT	3 cut(s)	435, 1324, 2244
MaeIII	GTNAC	6 cut(s)	160, 169, 548, 1825, 2038, 2085
MbiI	CCGCTC	1 cut(s)	252
MflI	RGATCY	2 cut(s)	1009, 2461
MhlI	GDGCHC	6 cut(s)	231, 435, 441, 491, 2171, 2525
Mly113I	GGCGCC	1 cut(s)	267
MlyI	GAGTC	3 cut(s)	357, 391, 1372
MmeI	TCCRAC	4 cut(s)	410, 1189, 1878, 2517
MreI	CGCCGGCG	1 cut(s)	263
MroI	TCCGGA	1 cut(s)	1882
MroNI	GCCGGC	3 cut(s)	199, 263, 478
MroXI	GAANNNNTTC	1 cut(s)	323
MseI	TTAA	5 cut(s)	1143, 1470, 1746, 1809, 2378
MslI	CAYNNNNRTG	2 cut(s)	2220, 2346
MspA1I	CMGCKG	3 cut(s)	959, 1193, 1643
MspI	CCGG	7 cut(s)	182, 200, 264, 336, 423, 479, 1883
MspR9I	CCNGG	7 cut(s)	150, 182, 484, 1254, 1683, 1698, 2433
Mva1269I	GAATGC	2 cut(s)	782, 1718
MvaI	CCWGG	6 cut(s)	150, 484, 1254, 1683, 1698, 2433
NaeI	GCCGGC	3 cut(s)	201, 265, 480
NarI	GGCGCC	1 cut(s)	267
NciI	CCSGG	1 cut(s)	182
NcoI	CCATGG	1 cut(s)	1411
NdeI	CATATG	1 cut(s)	1513
NgoMIV	GCCGGC	3 cut(s)	199, 263, 478
NlaIV	GGNNCC	7 cut(s)	204, 268, 477, 488, 907, 1657, 2026
NmeAIII	GCCGAG	2 cut(s)	420, 487
NmuCI	GTSAC	4 cut(s)	160, 169, 548, 2038
NspI	RCATGY	3 cut(s)	1859, 2306, 2328
NspV	TTCGAA	1 cut(s)	1173
OliI	CACNNNNGTG	1 cut(s)	2220
PaeI	GCATGC	1 cut(s)	1859
PagI	TCATGA	2 cut(s)	1077, 1918
PaqCI	CACCTGC	1 cut(s)	51
PauI	GCGCGC	2 cut(s)	5, 233
PciSI	GCTCTTC	1 cut(s)	53
PcsI	WCGNNNNNNNCGW	1 cut(s)	465
PctI	GAATGC	2 cut(s)	782, 1718
PdiI	GCCGGC	3 cut(s)	201, 265, 480
PdmI	GAANNNNTTC	1 cut(s)	323
PfeI	GAWTC	3 cut(s)	308, 324, 2438
PflFI	GACNNNGTC	1 cut(s)	2288
PflMI	CCANNNNNTGG	1 cut(s)	787
PkrI	GCNGC	8 cut(s)	198, 421, 841, 850, 961, 1090, 1366, 2313
Ple19I	CGATCG	1 cut(s)	2454
PleI	GAGTC	3 cut(s)	356, 390, 1372
PluTI	GGCGCC	1 cut(s)	270
PmaCI	CACGTG	1 cut(s)	436
PmlI	CACGTG	1 cut(s)	436
PpsI	GAGTC	3 cut(s)	356, 390, 1372
Ppu21I	YACGTR	1 cut(s)	436
PshBI	ATTAAT	1 cut(s)	1470
PsiI	TTATAA	2 cut(s)	1004, 1770
Psp124BI	GAGCTC	1 cut(s)	231
Psp6I	CCWGG	6 cut(s)	148, 482, 1252, 1681, 1696, 2431
PspCI	CACGTG	1 cut(s)	436
PspEI	GGTNACC	1 cut(s)	2038
PspFI	CCCAGC	2 cut(s)	444, 955
PspGI	CCWGG	6 cut(s)	148, 482, 1252, 1681, 1696, 2431
PspN4I	GGNNCC	7 cut(s)	204, 268, 477, 488, 907, 1657, 2026
PspPI	GGNCC	3 cut(s)	1568, 1988, 2024
PsrI	GAACNNNNNNTAC	2 cut(s)	2187, 2219
PsuI	RGATCY	2 cut(s)	1009, 2461
PsyI	GACNNNGTC	1 cut(s)	2288
PteI	GCGCGC	2 cut(s)	5, 233
PvuI	CGATCG	1 cut(s)	2454
PvuII	CAGCTG	2 cut(s)	959, 1193
RsaI	GTAC	5 cut(s)	191, 1034, 1341, 2337, 2510
RsaNI	GTAC	5 cut(s)	190, 1033, 1340, 2336, 2509
RseI	CAYNNNNRTG	2 cut(s)	2220, 2346
SacI	GAGCTC	1 cut(s)	231
SacII	CCGCGG	1 cut(s)	1644
SapI	GCTCTTC	1 cut(s)	53
SaqAI	TTAA	5 cut(s)	1143, 1470, 1746, 1809, 2378
SatI	GCNGC	8 cut(s)	197, 420, 840, 849, 960, 1089, 1365, 2312
Sau96I	GGNCC	3 cut(s)	1568, 1988, 2024
SchI	GAGTC	3 cut(s)	357, 391, 1372
ScrFI	CCNGG	7 cut(s)	150, 182, 484, 1254, 1683, 1698, 2433
SduI	GDGCHC	6 cut(s)	231, 435, 441, 491, 2171, 2525
SfaNI	GCATC	3 cut(s)	1068, 1710, 2325
SfcI	CTRYAG	2 cut(s)	1368, 1458
SfoI	GGCGCC	1 cut(s)	268
Sfr303I	CCGCGG	1 cut(s)	1644
SfuI	TTCGAA	1 cut(s)	1173
SgrAI	CRCCGGYG	1 cut(s)	263
SgrBI	CCGCGG	1 cut(s)	1644
SinI	GGWCC	2 cut(s)	1568, 1988
SmiMI	CAYNNNNRTG	2 cut(s)	2220, 2346
SmlI	CTYRAG	3 cut(s)	239, 843, 2170
SmoI	CTYRAG	3 cut(s)	239, 843, 2170
SphI	GCATGC	1 cut(s)	1859
SspDI	GGCGCC	1 cut(s)	266
SspI	AATATT	2 cut(s)	1729, 2530
SspMI	CTAG	6 cut(s)	713, 804, 881, 1020, 1391, 1761
SstI	GAGCTC	1 cut(s)	231
StyD4I	CCNGG	7 cut(s)	148, 180, 482, 1252, 1681, 1696, 2431
StyI	CCWWGG	2 cut(s)	880, 1411
TaaI	ACNGT	8 cut(s)	178, 548, 554, 657, 700, 1339, 1896, 2489
TaiI	ACGT	3 cut(s)	438, 1327, 2247
TaqI	TCGA	6 cut(s)	213, 219, 300, 722, 1153, 1173
TaqII	GACCGA	1 cut(s)	404
TatI	WGTACW	2 cut(s)	1032, 2335
TauI	GCSGC	3 cut(s)	199, 422, 1367
TfiI	GAWTC	3 cut(s)	308, 324, 2438
Tru1I	TTAA	5 cut(s)	1143, 1470, 1746, 1809, 2378
Tru9I	TTAA	5 cut(s)	1143, 1470, 1746, 1809, 2378
TscAI	CASTG	5 cut(s)	553, 1061, 1899, 1940, 2494
TseFI	GTSAC	4 cut(s)	160, 169, 548, 2038
TseI	GCWGC	5 cut(s)	839, 848, 959, 1088, 2311
Tsp45I	GTSAC	4 cut(s)	160, 169, 548, 2038
TspDTI	ATGAA	4 cut(s)	618, 785, 1119, 2435
TspGWI	ACGGA	2 cut(s)	318, 960
TspRI	CASTG	5 cut(s)	553, 1061, 1899, 1940, 2494
Tth111I	GACNNNGTC	1 cut(s)	2288
Van91I	CCANNNNNTGG	1 cut(s)	787
VpaK11BI	GGWCC	2 cut(s)	1568, 1988
VspI	ATTAAT	1 cut(s)	1470
XagI	CCTNNNNNAGG	4 cut(s)	900, 939, 1441, 2033
XapI	RAATTY	8 cut(s)	209, 637, 792, 861, 888, 1550, 1981, 2275
XbaI	TCTAGA	1 cut(s)	1760
XceI	RCATGY	3 cut(s)	1859, 2306, 2328
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1883
XmaJI	CCTAGG	1 cut(s)	880
XmiI	GTMKAC	1 cut(s)	1629
XmnI	GAANNNNTTC	1 cut(s)	323
XspI	CTAG	6 cut(s)	713, 804, 881, 1020, 1391, 1761

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.