Rmu_sc0004741.1_g000007
BZIP Family

ABSCISIC ACID-INSENSITIVE 5-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004741.1
Physical Location & Seq
Reverse (-)
34168 .. 37153
2986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004741.1_g000007.1.cds

Sequence Viewer

Length: 1398 bp
atggtagcttctgatgagtctggaggccttggttatgaccacaattatgatagtaatgatgctaaacctcaaccaccaccatcacagcacgaaaatggggaatcatcaaaacagaattcgatattctcacttactcttgatgaaattcaaagcaagagtgggaagagttttgggtccatgaacatggatgaattccttgccaacatatggagtgctgatgaaaatcaagtttcttcagaacaacccaaccaaggtgatctggatgaccctgccaatgggaaagacacaacttcaaagcctgcctctctttcacggcagggatcattctccattcctaccccactctgcaagaaaactgtggatgaggtatggtcagagatcgacaaaactcgaccaccacccccgcctaacgacatgagtaatcttgatcatccccagagccaatcaaccataggagaaataactctggaagatttcctagtaaaagctggtgtagttcaagaatcaccttctcagaaccgaatggaaagtgacccaattcatccacaaggtggtgacgccaacaactctaatatggcaactagcagtagcatgtatgtgggtacaagttctaaaatggggaataatgtgattgcttcaggacatttgaatccccaaaatgctgtgccaaacaatctgtctggaaatagatatgcgattgctggatatccaatttttggacagaataaaatgattgtgggaaatgcatctttttgtaccagtaatgaaattgagaaacgtcacagtttgccagaatctagtgggacaaagaacaagaagaggatgattgatggtccactggaggtagcagtggagcggaggcaacgaaggatgatcaaaaatcgagagtcagcagctcggtctcgtgcaaggaaacaggcatacactgtggaactagaagctgaggtgaatcaacttgaagacgagaatgaaaagctgaagcaaacagtggagggaatcgaacagaggcgaaaacaagaggtaggtgatgggaaggaaacaatccacaaaagcgcaaaggttggcagcaaagttgaggacaatgaggaggacttggagggcggcgctgagaatttcagtggaatccatggcagccctgagattattgagggtctcctgatggtactcgtgggatccatggaagaagttgaagcgggccacgttcattccggcccagagaagcttctccaccatcggcaccgacctggatgcaggtcccagggtgcacaagatcttcttcttcggcttctgatctctctctctctctctcttcttcttcttcttcttcttcaatctgtgaattcatcctttcatccttcaatctgtgaattcgtccttgatgtgaagcacttgtgttaa

Protein Analysis

465

Amino Acids

50.86

Weight (kDa)

5.29

Isoelectric Point (pI)

57.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1242
AccB1I GGYRCC 1 cut(s) 1236
AccB7I CCANNNNNTGG 3 cut(s) 207, 551, 716
AccBSI CCGCTC 1 cut(s) 856
AciI CCGC 4 cut(s) 404, 856, 1101, 1193
AclWI GGATC 3 cut(s) 328, 1167, 1180
AcsI RAATTY 6 cut(s) 115, 144, 191, 1111, 1339, 1367
AcuI CTGAAG 3 cut(s) 219, 621, 998
AcyI GRCGYC 1 cut(s) 558
AdeI CACNNNGTG 1 cut(s) 551
AfaI GTAC 3 cut(s) 604, 757, 1164
AfiI CCNNNNNNNGG 5 cut(s) 207, 251, 275, 551, 716
AgsI TTSAA 8 cut(s) 149, 294, 500, 649, 959, 1190, 1331, 1359
AjnI CCWGG 2 cut(s) 1243, 1257
AluBI AGCT 6 cut(s) 8, 488, 896, 941, 976, 1222
AluI AGCT 6 cut(s) 8, 488, 896, 941, 976, 1222
Alw21I GWGCWC 1 cut(s) 1267
Alw26I GTCTC 2 cut(s) 906, 1157
Alw44I GTGCAC 1 cut(s) 1263
AlwI GGATC 3 cut(s) 328, 1167, 1180
AoxI GGCC 3 cut(s) 25, 1195, 1210
ApaLI GTGCAC 1 cut(s) 1263
ApeKI GCWGC 3 cut(s) 893, 1065, 1131
ApoI RAATTY 6 cut(s) 115, 144, 191, 1111, 1339, 1367
ArsI GACNNNNNNTTYG 2 cut(s) 662, 694
AspLEI GCGC 2 cut(s) 1055, 1106
AspS9I GGNCC 5 cut(s) 174, 833, 1195, 1211, 1254
AsuHPI GGTGA 5 cut(s) 266, 498, 566, 958, 1037
AvaII GGWCC 3 cut(s) 174, 833, 1254
BaeGI GKGCMC 1 cut(s) 1267
BamHI GGATCC 1 cut(s) 1172
BanI GGYRCC 1 cut(s) 1236
BauI CACGAG 2 cut(s) 903, 1166
BbsI GAAGAC 1 cut(s) 966
Bbv12I GWGCWC 1 cut(s) 1267
BbvCI CCTCAGC 1 cut(s) 942
BbvI GCAGC 3 cut(s) 905, 1077, 1143
BccI CCATC 5 cut(s) 88, 824, 1022, 1153, 1239
BceAI ACGGC 1 cut(s) 329
BcgI CGANNNNNNTGC 2 cut(s) 1230, 1264
BciT130I CCWGG 2 cut(s) 1245, 1259
BclI TGATCA 2 cut(s) 427, 873
BcoDI GTCTC 2 cut(s) 906, 1157
BfaI CTAG 4 cut(s) 479, 582, 798, 935
BfoI RGCGCY 1 cut(s) 1107
BfuAI ACCTGC 1 cut(s) 1242
BglII AGATCT 1 cut(s) 1270
BisI GCNGC 4 cut(s) 894, 1066, 1102, 1132
BlsI GCNGC 4 cut(s) 895, 1067, 1103, 1133
Bme1390I CCNGG 2 cut(s) 1245, 1259
Bme18I GGWCC 3 cut(s) 174, 833, 1254
BmgT120I GGNCC 5 cut(s) 174, 833, 1195, 1211, 1254
BmiI GGNNCC 4 cut(s) 175, 1174, 1238, 1256
BmrFI CCNGG 2 cut(s) 1245, 1259
BmsI GCATC 3 cut(s) 49, 755, 1238
BpiI GAAGAC 1 cut(s) 966
BpmI CTGGAG 2 cut(s) 42, 860
Bpu10I CCTNAGC 1 cut(s) 942
BsaBI GATNNNNATC 1 cut(s) 222
BsaHI GRCGYC 1 cut(s) 558
BsaI GGTCTC 2 cut(s) 906, 1157
BsaJI CCNNGG 6 cut(s) 28, 250, 1126, 1176, 1257, 1258
Bsc4I CCNNNNNNNGG 5 cut(s) 207, 251, 275, 551, 716
Bse1I ACTGG 2 cut(s) 759, 843
Bse8I GATNNNNATC 1 cut(s) 222
BseBI CCWGG 2 cut(s) 1245, 1259
BseDI CCNNGG 6 cut(s) 28, 250, 1126, 1176, 1257, 1258
BseJI GATNNNNATC 1 cut(s) 222
BseLI CCNNNNNNNGG 5 cut(s) 207, 251, 275, 551, 716
BseMII CTCAG 4 cut(s) 527, 933, 1098, 1128
BseNI ACTGG 2 cut(s) 759, 843
BseRI GAGGAG 1 cut(s) 1100
BseSI GKGCMC 1 cut(s) 1267
BseXI GCAGC 3 cut(s) 905, 1077, 1143
BshFI GGCC 3 cut(s) 27, 1197, 1212
BshNI GGYRCC 1 cut(s) 1236
BsiHKAI GWGCWC 1 cut(s) 1267
BsiSI CCGG 1 cut(s) 1209
BslFI GGGAC 2 cut(s) 817, 1240
BslI CCNNNNNNNGG 5 cut(s) 207, 251, 275, 551, 716
BsmAI GTCTC 2 cut(s) 906, 1157
BsmFI GGGAC 2 cut(s) 817, 1240
BsnI GGCC 3 cut(s) 27, 1197, 1212
Bso31I GGTCTC 2 cut(s) 906, 1157
Bsp1286I GDGCHC 1 cut(s) 1267
Bsp143I GATC 8 cut(s) 256, 320, 378, 427, 873, 1172, 1270, 1290
Bsp19I CCATGG 2 cut(s) 1126, 1176
BspACI CCGC 4 cut(s) 404, 856, 1101, 1193
BspANI GGCC 3 cut(s) 27, 1197, 1212
BspCNI CTCAG 4 cut(s) 526, 934, 1099, 1129
BspLI GGNNCC 4 cut(s) 175, 1174, 1238, 1256
BspMI ACCTGC 1 cut(s) 1242
BspPI GGATC 3 cut(s) 328, 1167, 1180
BspT107I GGYRCC 1 cut(s) 1236
BspTNI GGTCTC 2 cut(s) 906, 1157
BsrBI CCGCTC 1 cut(s) 856
BsrI ACTGG 2 cut(s) 759, 843
BssECI CCNNGG 6 cut(s) 28, 250, 1126, 1176, 1257, 1258
BssMI GATC 8 cut(s) 256, 320, 378, 427, 873, 1172, 1270, 1290
BssNI GRCGYC 1 cut(s) 558
BssSI CACGAG 2 cut(s) 903, 1166
BssT1I CCWWGG 4 cut(s) 28, 250, 1126, 1176
Bst2BI CACGAG 2 cut(s) 903, 1166
Bst2UI CCWGG 2 cut(s) 1245, 1259
Bst4CI ACNGT 4 cut(s) 358, 785, 928, 988
Bst6I CTCTTC 3 cut(s) 158, 812, 1314
BstACI GRCGYC 1 cut(s) 558
BstC8I GCNNGC 2 cut(s) 300, 1195
BstDEI CTNAG 4 cut(s) 513, 942, 1107, 1137
BstDSI CCRYGG 2 cut(s) 1126, 1176
BstH2I RGCGCY 1 cut(s) 1107
BstHHI GCGC 2 cut(s) 1055, 1106
BstKTI GATC 8 cut(s) 259, 323, 381, 430, 876, 1175, 1273, 1293
BstMAI GTCTC 2 cut(s) 906, 1157
BstMBI GATC 8 cut(s) 256, 320, 378, 427, 873, 1172, 1270, 1290
BstNI CCWGG 2 cut(s) 1245, 1259
BstNSI RCATGY 1 cut(s) 595
BstSCI CCNGG 2 cut(s) 1243, 1257
BstSLI GKGCMC 1 cut(s) 1267
BstV1I GCAGC 3 cut(s) 905, 1077, 1143
BstV2I GAAGAC 1 cut(s) 966
BstX2I RGATCY 2 cut(s) 1172, 1270
BstXI CCANNNNNNTGG 1 cut(s) 184
BstYI RGATCY 2 cut(s) 1172, 1270
BsuRI GGCC 3 cut(s) 27, 1197, 1212
BtgI CCRYGG 2 cut(s) 1126, 1176
BtsI GCAGTG 1 cut(s) 855
BtsIMutI CAGTG 5 cut(s) 836, 855, 924, 993, 1123
BveI ACCTGC 1 cut(s) 1242
Cac8I GCNNGC 2 cut(s) 300, 1195
CfoI GCGC 2 cut(s) 1055, 1106
Cfr13I GGNCC 5 cut(s) 174, 833, 1195, 1211, 1254
CseI GACGC 1 cut(s) 566
Csp6I GTAC 3 cut(s) 603, 756, 1163
CviAII CATG 6 cut(s) 178, 184, 415, 592, 1127, 1177
CviQI GTAC 3 cut(s) 603, 756, 1163
DdeI CTNAG 4 cut(s) 513, 942, 1107, 1137
DpnI GATC 8 cut(s) 258, 322, 380, 429, 875, 1174, 1272, 1292
DpnII GATC 8 cut(s) 256, 320, 378, 427, 873, 1172, 1270, 1290
DraIII CACNNNGTG 1 cut(s) 551
Eam1104I CTCTTC 3 cut(s) 158, 812, 1314
EarI CTCTTC 3 cut(s) 158, 812, 1314
Eco130I CCWWGG 4 cut(s) 28, 250, 1126, 1176
Eco147I AGGCCT 1 cut(s) 27
Eco31I GGTCTC 2 cut(s) 906, 1157
Eco32I GATATC 1 cut(s) 707
Eco47I GGWCC 3 cut(s) 174, 833, 1254
Eco57I CTGAAG 3 cut(s) 219, 621, 998
EcoO109I RGGNCCY 1 cut(s) 1254
EcoRI GAATTC 4 cut(s) 115, 191, 1339, 1367
EcoRII CCWGG 2 cut(s) 1243, 1257
EcoRV GATATC 1 cut(s) 707
EcoT14I CCWWGG 4 cut(s) 28, 250, 1126, 1176
EcoT22I ATGCAT 1 cut(s) 748
ErhI CCWWGG 4 cut(s) 28, 250, 1126, 1176
FaeI CATG 6 cut(s) 181, 187, 418, 595, 1130, 1180
FalI AAGNNNNNCTT 2 cut(s) 1260, 1292
FaqI GGGAC 2 cut(s) 817, 1240
FatI CATG 6 cut(s) 177, 183, 414, 591, 1126, 1176
FauI CCCGC 2 cut(s) 411, 1186
FauNDI CATATG 1 cut(s) 206
FbaI TGATCA 2 cut(s) 427, 873
Fnu4HI GCNGC 4 cut(s) 894, 1066, 1102, 1132
Fsp4HI GCNGC 4 cut(s) 894, 1066, 1102, 1132
FspBI CTAG 4 cut(s) 479, 582, 798, 935
GlaI GCGC 2 cut(s) 1054, 1105
GluI GCNGC 4 cut(s) 894, 1066, 1102, 1132
GsuI CTGGAG 2 cut(s) 42, 860
HaeII RGCGCY 1 cut(s) 1107
HaeIII GGCC 3 cut(s) 27, 1197, 1212
HapII CCGG 1 cut(s) 1209
HgaI GACGC 1 cut(s) 566
HhaI GCGC 2 cut(s) 1055, 1106
Hin1I GRCGYC 1 cut(s) 558
Hin1II CATG 6 cut(s) 181, 187, 418, 595, 1130, 1180
Hin6I GCGC 2 cut(s) 1053, 1104
HinP1I GCGC 2 cut(s) 1053, 1104
HindIII AAGCTT 1 cut(s) 1220
HinfI GANTC 9 cut(s) 17, 101, 503, 649, 794, 887, 949, 996, 1122
HpaII CCGG 1 cut(s) 1209
HphI GGTGA 5 cut(s) 266, 498, 566, 958, 1037
Hpy166II GTNNAC 2 cut(s) 836, 1265
Hpy188I TCNGA 5 cut(s) 13, 238, 376, 516, 1290
Hpy8I GTNNAC 2 cut(s) 836, 1265
HpyAV CCTTC 4 cut(s) 519, 861, 1027, 1365
HpyCH4III ACNGT 4 cut(s) 358, 785, 928, 988
HpyCH4IV ACGT 2 cut(s) 778, 1200
HpyCH4V TGCA 5 cut(s) 348, 746, 908, 1251, 1265
HpyF3I CTNAG 4 cut(s) 513, 942, 1107, 1137
HpySE526I ACGT 2 cut(s) 778, 1200
Hsp92I GRCGYC 1 cut(s) 558
Hsp92II CATG 6 cut(s) 181, 187, 418, 595, 1130, 1180
HspAI GCGC 2 cut(s) 1053, 1104
Ksp22I TGATCA 2 cut(s) 427, 873
Kzo9I GATC 8 cut(s) 256, 320, 378, 427, 873, 1172, 1270, 1290
LmnI GCTCC 1 cut(s) 853
Lsp1109I GCAGC 3 cut(s) 905, 1077, 1143
LweI GCATC 3 cut(s) 49, 755, 1238
MaeI CTAG 4 cut(s) 479, 582, 798, 935
MaeII ACGT 2 cut(s) 778, 1200
MaeIII GTNAC 3 cut(s) 530, 554, 779
MalI GATC 8 cut(s) 258, 322, 380, 429, 875, 1174, 1272, 1292
MbiI CCGCTC 1 cut(s) 856
MboI GATC 8 cut(s) 256, 320, 378, 427, 873, 1172, 1270, 1290
MflI RGATCY 2 cut(s) 1172, 1270
MhlI GDGCHC 1 cut(s) 1267
MlyI GAGTC 2 cut(s) 26, 896
Mph1103I ATGCAT 1 cut(s) 748
MseI TTAA 1 cut(s) 1396
MslI CAYNNNNRTG 4 cut(s) 45, 93, 182, 596
MspI CCGG 1 cut(s) 1209
MspR9I CCNGG 2 cut(s) 1245, 1259
MvaI CCWGG 2 cut(s) 1245, 1259
NcoI CCATGG 2 cut(s) 1126, 1176
NdeI CATATG 1 cut(s) 206
NdeII GATC 8 cut(s) 256, 320, 378, 427, 873, 1172, 1270, 1290
NlaIII CATG 6 cut(s) 181, 187, 418, 595, 1130, 1180
NlaIV GGNNCC 4 cut(s) 175, 1174, 1238, 1256
NmuCI GTSAC 3 cut(s) 530, 554, 779
NsiI ATGCAT 1 cut(s) 748
NspI RCATGY 1 cut(s) 595
PasI CCCWGGG 1 cut(s) 1258
PceI AGGCCT 1 cut(s) 27
PfeI GAWTC 7 cut(s) 101, 503, 649, 794, 949, 996, 1122
PflMI CCANNNNNTGG 3 cut(s) 207, 551, 716
PkrI GCNGC 4 cut(s) 895, 1067, 1103, 1133
PleI GAGTC 2 cut(s) 25, 895
PpsI GAGTC 2 cut(s) 25, 895
PpuMI RGGWCCY 1 cut(s) 1254
Psp5II RGGWCCY 1 cut(s) 1254
Psp6I CCWGG 2 cut(s) 1243, 1257
PspGI CCWGG 2 cut(s) 1243, 1257
PspN4I GGNNCC 4 cut(s) 175, 1174, 1238, 1256
PspPI GGNCC 5 cut(s) 174, 833, 1195, 1211, 1254
PspPPI RGGWCCY 1 cut(s) 1254
PsuI RGATCY 2 cut(s) 1172, 1270
RsaI GTAC 3 cut(s) 604, 757, 1164
RsaNI GTAC 3 cut(s) 603, 756, 1163
RseI CAYNNNNRTG 4 cut(s) 45, 93, 182, 596
SaqAI TTAA 1 cut(s) 1396
SatI GCNGC 4 cut(s) 894, 1066, 1102, 1132
Sau3AI GATC 8 cut(s) 256, 320, 378, 427, 873, 1172, 1270, 1290
Sau96I GGNCC 5 cut(s) 174, 833, 1195, 1211, 1254
SchI GAGTC 2 cut(s) 26, 896
ScrFI CCNGG 2 cut(s) 1245, 1259
SduI GDGCHC 1 cut(s) 1267
SfaNI GCATC 3 cut(s) 49, 755, 1238
SinI GGWCC 3 cut(s) 174, 833, 1254
SmiMI CAYNNNNRTG 4 cut(s) 45, 93, 182, 596
SseBI AGGCCT 1 cut(s) 27
SsiI CCGC 4 cut(s) 404, 856, 1101, 1193
SspMI CTAG 4 cut(s) 479, 582, 798, 935
StuI AGGCCT 1 cut(s) 27
StyD4I CCNGG 2 cut(s) 1243, 1257
StyI CCWWGG 4 cut(s) 28, 250, 1126, 1176
TaaI ACNGT 4 cut(s) 358, 785, 928, 988
TaiI ACGT 2 cut(s) 781, 1203
TaqI TCGA 5 cut(s) 119, 381, 391, 883, 999
TaqII GACCGA 1 cut(s) 888
TauI GCSGC 1 cut(s) 1104
TfiI GAWTC 7 cut(s) 101, 503, 649, 794, 949, 996, 1122
Tru1I TTAA 1 cut(s) 1396
Tru9I TTAA 1 cut(s) 1396
TscAI CASTG 5 cut(s) 843, 855, 931, 993, 1123
TseFI GTSAC 3 cut(s) 530, 554, 779
TseI GCWGC 3 cut(s) 893, 1065, 1131
Tsp45I GTSAC 3 cut(s) 530, 554, 779
TspRI CASTG 5 cut(s) 843, 855, 931, 993, 1123
Van91I CCANNNNNTGG 3 cut(s) 207, 551, 716
VneI GTGCAC 1 cut(s) 1263
VpaK11BI GGWCC 3 cut(s) 174, 833, 1254
XapI RAATTY 6 cut(s) 115, 144, 191, 1111, 1339, 1367
XceI RCATGY 1 cut(s) 595
XspI CTAG 4 cut(s) 479, 582, 798, 935
Zsp2I ATGCAT 1 cut(s) 748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.