Rmu_sc0005127.1_g000003

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005127.1
OG0014543
Physical Location & Seq
Forward (+)
13918 .. 18704
4787 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 4494 bp
atggagatttcccactccttctacaatcttcttctcttgttcatgttctcagcagctgtttcagcagctgatctttactcagagacccttctgagcttaaagtctgagctcacagatgacgatgatagcttacaagactggtctgtgcctcctggacaaaacccatctgcgaaaatctatgcctgttcttggtctggtgtcaaatgcaacagcaacaactcctctgttaccagtctagacctgtcagtgaagagtcttgccggttcaatctccggagtcaacttcagcgtctttactgatcttcttgacctgaacctgagttacaactcattttccggcaagctcccactgggaatgttcaccctggccaacttaacaagcttggacattagccggaacaacttctccggccagttcccagctggaatctccggtcttaccaatctggttgtgtttgatgcattcagcaacagcttttctgggtcactgcctgctgaggtgtctcaacttcagaatctcaaggtcctgaatctagctgggagttacttcaagggtccaatcccactagaatatggtaattttcaaagccttgagtttattcatcttgcagggaatatgctcagtgggaacataccacctgaattgggcaagctcaaaacagtgactcatatggagattggctacaattcttaccagggaggcatcccttggcaattgggaaacatgagccagcttcagtatcttgatattgctaatgcaaatctctctgagtctattccaagagagcttgggaatctcaccaagcttgagtctctctttctcttcagaaaccagcttagtggatcaataccagtggagttcagtaaacttcaatctctcacaagcttggatctttcggataatgaaatctccgggccgatcccggatagtcttctagagttgaagaacctgaaactgttgagtcttttctacaatgagatgagtggtgctgttcctgaagggattgctgagcttccttcactggagactcttcttatatggaacaactacttctctgggaatcttccacaggatttggggaggaactccaacctcatgtgggttgatgtgtctacaaacaacttcaatggcagcattccagcagatatctgtgtgaaaggtgtgctctttaagctgatgatgttttcgaataattttagtggcagtcttgcaccatctctgtccaattgttcttcacttgttcgtcttcggcttgaagataactcattctcaggtgagatccctttgaaattcagcaactttcgtgatctttcatatgtagacttgtccaagaataaacttactggtgggattccaatagatatagaccaagctcccaagcttgagtactttaatgtgtccaataatccagaattagggggcacaattcctgcacaaacatggtctttgccagttcttcagaatttctcagcttcctcgtgtggtatcgtaggcaatcttccggcatttggaagctgtatatccatatctgttattgaaatgaacatgaacagtttatcagggggtgttccagacagtgtttctagctgccgagctcttgagagatttggtttggccaacaataacttatcaggtcatatacctgaggagcttgcaagtcttcctgctctgcgtgtcctagacctatcacactcagctgtttcagcagctgatctttactcagagacccttctgagcttaaagtctgagctcacagatgacgatgatagcttacaagactggtctgtgcctcctggacaaaacccatctgcgaaaatctatgcctgttcttggtctggtgtcaaatgcaacagcaacaactcctctgttaccagtctagacctgtcagtgaagagtcttgccggttcaatctccggagtcaacttcagcgtctttactgatcttcttgacctgaacctgagttacaactcattttccggcaagctcccactgggaatgttcaccctggccaacttaacaagcttggacattagccggaacaacttctccggccagttcccagctggaatctccggtcttaccaatctggttgtgtttgatgcattcagcaacagcttttctgggtcactgcctgctgaggtgtctcaacttcagaatctcaaggtcctgaatctagctgggagttacttcaagggtccaatcccactagaatatggtaattttcaaagccttgagtttattcatcttgcagggaatatgctcagtgggaacataccacctgaattgggcaagctcaaaacagtgactcatatggagattggctacaattcttaccagggaggcatcccttggcaattgggaaacatgagccagcttcagtatcttgatattgctaatgcaaatctctctgagtctattccaagagagcttgggaatctcaccaagcttgagtccctctttctcttcagaaaccagcttagtggatcaataccagtggagttcagtaaacttcaatctctcacaagcttggatctttcggataatgaaatctccgggccgatcccggatagtcttctagagttgaagaacctgaaactgttgagtcttttctacaatgagatgagtggtgctgttcctgaagggattgctgagcttccttcactggagactcttcttatatggaacaactacttctctgggaatcttccacaggatttggggaggaactccaacctcatgtgggttgatgtgtctacaaacaacttcaatggcagcattccagcagatatctgtgtgaaaggtgtgctctttaagctgatgatgttttcgaataattttagtggcagtcttgctccatctctgtccaattgttcttcacttgttcgtcttcggcttgaagataactcattctcaggtgagatccctttgaaattcagcaactttcgtgatctttcatatgtagacttgtccaagaataaacttactggtgggattccaatagatatagaccaagctcccaagcttgagtactttaatgtgtccaataatccagaattagggggcacaattcctgcacaaacatggtctttgccagttcttcagaatttctcagcttcctcgtgtggtatcgtaggcaatcttccggcatttggaagctgtaaatccttatctgttattgaattgaacatgaacagtttatcagggggtgttccagacagtgtttctagctgccgagctcttgagagatttggtttggccaacaataacttatcaggtcatatacctgaggagcttgcaagtcttcctgctctgcgtgtcctagacctatcacataatagtttggatggaccaataccttcaaagtttggttcttcttcaagcttatcacttctgaatgtgtctttcaatgatatttctgggacaattccctctggaaaggtagtgaagactatgggaagtagcgcattcgttggaaatccaaagctatgtggagaacctttgagatcatgtcccggttcagtggctatcttcggaagcagaggcaccgggaagcttatatgggtcttgctactgtgtgcaggcatagttatgttccttgctctgtcagctctaggagtactttatttttataaaggcagcaaaggccaatggaagacggtctcatttgctggactccctcaattcacagcaagcgatgtattgaagagcttcagttccatagaatccatggatgatgcattgtccccgacgtcagcatcagtatgcaaagcagttctgccaacaggaatcacagtttcagtgaagaagtttgaatgcgatccgaagctagtgaatgttatgttgccattcataacccgaattgggagtgcaaggcataagaatctaatccgattgctcggattttgctacaacaagcatctggtttatctcttgtacgattacttgcccaatggaagtttatcagaaaatataagagtgaaaagggaatgggcagctaagtacaaaattgtggtgagcattgcaaggggattgtgcttccttcaccatgaatgtcatcctgcaattggtcatggagacttgagatcaagtaatataatgtttgacgaaaacatggaaccgcatctgacagaattcggattcaagcatctgctggagttgaacaaaacttcaggtactgcagagacctccaccatggatacaggtgctgcaaacagttctgtagaagaggagctatacagagatgtatacagcttcggggagatcatgctcgaaattttatccaacggcaggttgacgaattcaggagcaagcttacatagcaagtcgagggaaagtgttctcagagaaataatcaatgagaatgaagttggttccaacacttcagtgcaacaggagataaaaagggtgctcgaggtagctacgctctgcactaggagccgaccatctgatcgaccatccatggaggatacattaaagcttttacaggctcgataa

Protein Analysis

1497

Amino Acids

161.97

Weight (kDa)

5.04

Isoelectric Point (pI)

33.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 166 - 274 8e-09 Leucine-rich repeat region
LRR_14 PF23598 281 - 372 3.8e-07 Leucine-rich repeat region
LRR_14 PF23598 713 - 821 9.9e-09 Leucine-rich repeat region
LRR_14 PF23598 828 - 920 3.4e-07 Leucine-rich repeat region
Pkinase PF00069 1260 - 1491 2.9e-18 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1261 - 1491 6.6e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014543)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51350
fragaria_vesca FvH4_1g01520
malus_domestica MD02G1012000.v1.1 MD15G1157800.v1.1
prunus_persica Prupe.7G253000_v2.0.a1
pyrus_communis pycom02g01130 pycom15g14160
rosa_chinensis RchiOBHm_Chr2g0086441
rosa_laevigata RLG00000015759
rosa_multiflora Rmu_sc0005127.1_g000003
rosa_roxburghii Rroxscaffold_2G00154570
rosa_rugosa Rorug01G0467300
rosa_samantha Rh2AG018100 Rh2BG017600 Rh2CG018500 Rh2DG019400
rosa_wichuraiana Rw2G001500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3630
AatII GACGTC 1 cut(s) 3752
Acc36I ACCTGC 1 cut(s) 4278
AccB1I GGYRCC 1 cut(s) 3542
AccI GTMKAC 5 cut(s) 1112, 1320, 2753, 2961, 4245
AccIII TCCGGA 2 cut(s) 272, 1913
AciI CCGC 1 cut(s) 4118
AclWI GGATC 9 cut(s) 850, 897, 913, 1273, 2491, 2538, 2554, 2914, 3812
AcoI YGGCCR 6 cut(s) 366, 409, 1614, 2007, 2050, 3255
AcsI RAATTY 7 cut(s) 1289, 1462, 2930, 3103, 4130, 4272, 4297
AcyI GRCGYC 1 cut(s) 3749
AfaI GTAC 6 cut(s) 1388, 3029, 3618, 3935, 4001, 4174
AjnI CCWGG 6 cut(s) 151, 363, 693, 1792, 2004, 2334
AleI CACNNNNGTG 1 cut(s) 4382
AloI GAACNNNNNNTCC 4 cut(s) 389, 421, 2030, 2062
Alw21I GWGCWC 7 cut(s) 111, 1167, 1597, 1752, 2808, 3238, 4410
AlwI GGATC 9 cut(s) 850, 897, 913, 1273, 2491, 2538, 2554, 2914, 3812
AlwNI CAGNNNCTG 5 cut(s) 56, 68, 1709, 4175, 4205
Ama87I CYCGRG 1 cut(s) 4409
Aor13HI TCCGGA 2 cut(s) 272, 1913
AoxI GGCC 9 cut(s) 366, 409, 914, 1614, 2007, 2050, 2555, 3255, 3643
ApoI RAATTY 7 cut(s) 1289, 1462, 2930, 3103, 4130, 4272, 4297
Asp700I GAANNNNTTC 4 cut(s) 401, 2042, 3707, 4335
AspLEI GCGC 1 cut(s) 3464
AspS9I GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
AsuC2I CCSGG 6 cut(s) 913, 923, 2554, 2564, 3513, 3547
AsuHPI GGTGA 8 cut(s) 352, 790, 1286, 1993, 2431, 2927, 4024, 4034
AsuII TTCGAA 2 cut(s) 1187, 2828
AvaI CYCGRG 1 cut(s) 4409
AvaII GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
AxyI CCTNAGG 2 cut(s) 1644, 3285
BaeGI GKGCMC 2 cut(s) 1424, 3065
BalI TGGCCA 4 cut(s) 368, 1616, 2009, 3257
BanI GGYRCC 1 cut(s) 3542
BanII GRGCYC 4 cut(s) 111, 1597, 1752, 3238
BarI GAAGNNNNNNTAC 4 cut(s) 1482, 1514, 3123, 3155
BauI CACGAG 2 cut(s) 1477, 3118
BbsI GAAGAC 8 cut(s) 923, 1238, 1652, 2564, 2879, 3293, 3452, 3659
Bbv12I GWGCWC 7 cut(s) 111, 1167, 1597, 1752, 2808, 3238, 4410
BbvCI CCTCAGC 2 cut(s) 495, 2136
BccI CCATC 7 cut(s) 172, 1222, 1813, 2863, 3338, 4450, 4462
BceAI ACGGC 1 cut(s) 4300
BciT130I CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
BciVI GTATCC 2 cut(s) 4189, 4459
BcnI CCSGG 6 cut(s) 913, 923, 2554, 2564, 3513, 3547
BfmI CTRYAG 2 cut(s) 4176, 4218
BfuAI ACCTGC 1 cut(s) 4278
BfuI GTATCC 2 cut(s) 4189, 4459
BlpI GCTNAGC 2 cut(s) 1008, 2649
BmcAI AGTACT 3 cut(s) 1388, 3029, 3618
Bme18I GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
BmeT110I CYCGRG 1 cut(s) 4409
BmgT120I GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
BmiI GGNNCC 6 cut(s) 555, 2196, 3544, 4116, 4372, 4436
BmrI ACTGGG 2 cut(s) 359, 2000
BmsI GCATC 9 cut(s) 448, 711, 2089, 2352, 3724, 3764, 3925, 4129, 4153
BmuI ACTGGG 2 cut(s) 359, 2000
BpiI GAAGAC 8 cut(s) 923, 1238, 1652, 2564, 2879, 3293, 3452, 3659
BpmI CTGGAG 3 cut(s) 1043, 2684, 4172
Bpu10I CCTNAGC 2 cut(s) 495, 2136
Bpu1102I GCTNAGC 2 cut(s) 1008, 2649
Bpu14I TTCGAA 2 cut(s) 1187, 2828
BpuMI CCSGG 6 cut(s) 913, 923, 2554, 2564, 3513, 3547
BsaHI GRCGYC 1 cut(s) 3749
BsaI GGTCTC 4 cut(s) 77, 1718, 3664, 4175
BsaJI CCNNGG 9 cut(s) 363, 694, 707, 2004, 2335, 2348, 3726, 4191, 4458
BsaWI WCCGGW 4 cut(s) 272, 431, 1913, 2072
BsaXI ACNNNNNCTCC 4 cut(s) 389, 419, 2030, 2060
Bse118I RCCGGY 2 cut(s) 260, 1901
Bse21I CCTNAGG 2 cut(s) 1644, 3285
Bse3DI GCAATG 1 cut(s) 4017
BseAI TCCGGA 2 cut(s) 272, 1913
BseBI CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
BseDI CCNNGG 9 cut(s) 363, 694, 707, 2004, 2335, 2348, 3726, 4191, 4458
BseGI GGATG 6 cut(s) 702, 2343, 3349, 3736, 4054, 4454
BseMI GCAATG 1 cut(s) 4017
BseRI GAGGAG 5 cut(s) 211, 1661, 1852, 3302, 4241
BseSI GKGCMC 2 cut(s) 1424, 3065
BseYI CCCAGC 4 cut(s) 418, 536, 2059, 2177
BsgI GTGCAG 4 cut(s) 1416, 3057, 3597, 4411
BshFI GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
BshNI GGYRCC 1 cut(s) 3542
BsiHKAI GWGCWC 7 cut(s) 111, 1167, 1597, 1752, 2808, 3238, 4410
BsiHKCI CYCGRG 1 cut(s) 4409
BslFI GGGAC 4 cut(s) 2437, 3433, 3495, 3727
BsmFI GGGAC 4 cut(s) 2437, 3433, 3495, 3727
BsmI GAATGC 6 cut(s) 461, 1134, 2102, 2775, 3464, 3818
BsnI GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
Bso31I GGTCTC 4 cut(s) 77, 1718, 3664, 4175
BsoBI CYCGRG 1 cut(s) 4409
Bsp119I TTCGAA 2 cut(s) 1187, 2828
Bsp1286I GDGCHC 9 cut(s) 111, 1167, 1424, 1597, 1752, 2808, 3065, 3238, 4410
Bsp13I TCCGGA 2 cut(s) 272, 1913
Bsp1720I GCTNAGC 2 cut(s) 1008, 2649
Bsp19I CCATGG 3 cut(s) 3726, 4191, 4458
BspACI CCGC 1 cut(s) 4118
BspANI GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
BspEI TCCGGA 2 cut(s) 272, 1913
BspLI GGNNCC 6 cut(s) 555, 2196, 3544, 4116, 4372, 4436
BspMAI CTGCAG 1 cut(s) 4180
BspMI ACCTGC 1 cut(s) 4278
BspPI GGATC 9 cut(s) 850, 897, 913, 1273, 2491, 2538, 2554, 2914, 3812
BspQI GCTCTTC 1 cut(s) 3698
BspT104I TTCGAA 2 cut(s) 1187, 2828
BspT107I GGYRCC 1 cut(s) 3542
BspTNI GGTCTC 4 cut(s) 77, 1718, 3664, 4175
BsrDI GCAATG 1 cut(s) 4017
BsrFI RCCGGY 2 cut(s) 260, 1901
BssAI RCCGGY 2 cut(s) 260, 1901
BssECI CCNNGG 9 cut(s) 363, 694, 707, 2004, 2335, 2348, 3726, 4191, 4458
BssNAI GTATAC 1 cut(s) 4246
BssNI GRCGYC 1 cut(s) 3749
BssSI CACGAG 2 cut(s) 1477, 3118
BssT1I CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
Bst1107I GTATAC 1 cut(s) 4246
Bst2BI CACGAG 2 cut(s) 1477, 3118
Bst2UI CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
Bst6I CTCTTC 8 cut(s) 245, 827, 1035, 1886, 2468, 2676, 3698, 4218
BstACI GRCGYC 1 cut(s) 3749
BstBI TTCGAA 2 cut(s) 1187, 2828
BstDSI CCRYGG 3 cut(s) 3726, 4191, 4458
BstF5I GGATG 6 cut(s) 702, 2343, 3349, 3736, 4054, 4454
BstHHI GCGC 1 cut(s) 3464
BstMWI GCNNNNNNNGC 8 cut(s) 62, 1171, 1703, 2812, 3605, 3642, 4317, 4434
BstNI CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
BstSFI CTRYAG 2 cut(s) 4176, 4218
BstSLI GKGCMC 2 cut(s) 1424, 3065
BstV2I GAAGAC 8 cut(s) 923, 1238, 1652, 2564, 2879, 3293, 3452, 3659
BstX2I RGATCY 4 cut(s) 889, 1278, 2530, 2919
BstXI CCANNNNNNTGG 2 cut(s) 839, 2480
BstYI RGATCY 4 cut(s) 889, 1278, 2530, 2919
BstZ17I GTATAC 1 cut(s) 4246
Bsu36I CCTNAGG 2 cut(s) 1644, 3285
BsuI GTATCC 2 cut(s) 4189, 4459
BsuRI GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
BtgI CCRYGG 3 cut(s) 3726, 4191, 4458
BtgZI GCGATG 1 cut(s) 3708
BtsCI GGATG 6 cut(s) 702, 2343, 3349, 3736, 4054, 4454
BtsI GCAGTG 2 cut(s) 485, 2126
BveI ACCTGC 1 cut(s) 4278
CaiI CAGNNNCTG 5 cut(s) 56, 68, 1709, 4175, 4205
CfoI GCGC 1 cut(s) 3464
Cfr10I RCCGGY 2 cut(s) 260, 1901
Cfr13I GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
CseI GACGC 2 cut(s) 277, 1918
Csp6I GTAC 6 cut(s) 1387, 3028, 3617, 3934, 4000, 4173
CviQI GTAC 6 cut(s) 1387, 3028, 3617, 3934, 4000, 4173
EaeI YGGCCR 6 cut(s) 366, 409, 1614, 2007, 2050, 3255
Eam1104I CTCTTC 8 cut(s) 245, 827, 1035, 1886, 2468, 2676, 3698, 4218
EarI CTCTTC 8 cut(s) 245, 827, 1035, 1886, 2468, 2676, 3698, 4218
Ecl136II GAGCTC 4 cut(s) 109, 1595, 1750, 3236
Eco130I CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
Eco24I GRGCYC 4 cut(s) 111, 1597, 1752, 3238
Eco31I GGTCTC 4 cut(s) 77, 1718, 3664, 4175
Eco32I GATATC 2 cut(s) 1147, 2788
Eco47I GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
Eco53kI GAGCTC 4 cut(s) 109, 1595, 1750, 3236
Eco81I CCTNAGG 2 cut(s) 1644, 3285
Eco88I CYCGRG 1 cut(s) 4409
EcoICRI GAGCTC 4 cut(s) 109, 1595, 1750, 3236
EcoO109I RGGNCCY 2 cut(s) 523, 2164
EcoRI GAATTC 2 cut(s) 4130, 4297
EcoRII CCWGG 6 cut(s) 151, 363, 693, 1792, 2004, 2334
EcoRV GATATC 2 cut(s) 1147, 2788
EcoT14I CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
EcoT22I ATGCAT 3 cut(s) 463, 2104, 3739
EcoT38I GRGCYC 4 cut(s) 111, 1597, 1752, 3238
ErhI CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
FaqI GGGAC 4 cut(s) 2437, 3433, 3495, 3727
FauNDI CATATG 4 cut(s) 669, 1315, 2310, 2956
FblI GTMKAC 5 cut(s) 1112, 1320, 2753, 2961, 4245
FokI GGATG 6 cut(s) 689, 2330, 3356, 3743, 4041, 4441
FriOI GRGCYC 4 cut(s) 111, 1597, 1752, 3238
GlaI GCGC 1 cut(s) 3463
GsaI CCCAGC 4 cut(s) 422, 540, 2063, 2181
GsuI CTGGAG 3 cut(s) 1043, 2684, 4172
HaeIII GGCC 9 cut(s) 368, 411, 916, 1616, 2009, 2052, 2557, 3257, 3645
HgaI GACGC 2 cut(s) 277, 1918
HhaI GCGC 1 cut(s) 3464
Hin1I GRCGYC 1 cut(s) 3749
Hin6I GCGC 1 cut(s) 3462
HinP1I GCGC 1 cut(s) 3462
HincII GTYRAC 3 cut(s) 280, 1921, 4293
HindII GTYRAC 3 cut(s) 280, 1921, 4293
HphI GGTGA 8 cut(s) 352, 790, 1286, 1993, 2431, 2927, 4024, 4034
Hpy99I CGWCG 1 cut(s) 3751
HpyAV CCTTC 9 cut(s) 28, 98, 992, 1026, 1739, 2633, 2667, 3366, 4049
HpyCH4IV ACGT 1 cut(s) 3749
HpyF10VI GCNNNNNNNGC 8 cut(s) 62, 1171, 1703, 2812, 3605, 3642, 4317, 4434
HpySE526I ACGT 1 cut(s) 3749
Hsp92I GRCGYC 1 cut(s) 3749
HspAI GCGC 1 cut(s) 3462
Kpn2I TCCGGA 2 cut(s) 272, 1913
LguI GCTCTTC 1 cut(s) 3698
LweI GCATC 9 cut(s) 448, 711, 2089, 2352, 3724, 3764, 3925, 4129, 4153
MaeII ACGT 1 cut(s) 3749
MfeI CAATTG 5 cut(s) 713, 1225, 2354, 2866, 4062
MflI RGATCY 4 cut(s) 889, 1278, 2530, 2919
MhlI GDGCHC 9 cut(s) 111, 1167, 1424, 1597, 1752, 2808, 3065, 3238, 4410
MlsI TGGCCA 4 cut(s) 368, 1616, 2009, 3257
MluNI TGGCCA 4 cut(s) 368, 1616, 2009, 3257
MmeI TCCRAC 5 cut(s) 1113, 2754, 3451, 4305, 4398
Mox20I TGGCCA 4 cut(s) 368, 1616, 2009, 3257
Mph1103I ATGCAT 3 cut(s) 463, 2104, 3739
MroI TCCGGA 2 cut(s) 272, 1913
MroXI GAANNNNTTC 4 cut(s) 401, 2042, 3707, 4335
MscI TGGCCA 4 cut(s) 368, 1616, 2009, 3257
MseI TTAA 9 cut(s) 98, 374, 1170, 1392, 1739, 2015, 2811, 3033, 4472
MslI CAYNNNNRTG 5 cut(s) 1438, 3079, 3587, 3760, 4382
Msp20I TGGCCA 4 cut(s) 368, 1616, 2009, 3257
MspA1I CMGCKG 6 cut(s) 56, 68, 422, 1697, 1709, 2063
MunI CAATTG 5 cut(s) 713, 1225, 2354, 2866, 4062
Mva1269I GAATGC 6 cut(s) 461, 1134, 2102, 2775, 3464, 3818
MvaI CCWGG 6 cut(s) 153, 365, 695, 1794, 2006, 2336
MwoI GCNNNNNNNGC 8 cut(s) 62, 1171, 1703, 2812, 3605, 3642, 4317, 4434
NciI CCSGG 6 cut(s) 913, 923, 2554, 2564, 3513, 3547
NcoI CCATGG 3 cut(s) 3726, 4191, 4458
NdeI CATATG 4 cut(s) 669, 1315, 2310, 2956
NlaIV GGNNCC 6 cut(s) 555, 2196, 3544, 4116, 4372, 4436
NmeAIII GCCGAG 2 cut(s) 1616, 3257
NmuCI GTSAC 4 cut(s) 483, 661, 2124, 2302
NsiI ATGCAT 3 cut(s) 463, 2104, 3739
NspV TTCGAA 2 cut(s) 1187, 2828
OliI CACNNNNGTG 1 cut(s) 4382
PaeR7I CTCGAG 1 cut(s) 4409
PciSI GCTCTTC 1 cut(s) 3698
PctI GAATGC 6 cut(s) 461, 1134, 2102, 2775, 3464, 3818
PdmI GAANNNNTTC 4 cut(s) 401, 2042, 3707, 4335
PfoI TCCNGGA 4 cut(s) 151, 921, 1792, 2562
PpuMI RGGWCCY 2 cut(s) 523, 2164
PsiI TTATAA 1 cut(s) 3630
Psp124BI GAGCTC 4 cut(s) 111, 1597, 1752, 3238
Psp5II RGGWCCY 2 cut(s) 523, 2164
Psp6I CCWGG 6 cut(s) 151, 363, 693, 1792, 2004, 2334
PspFI CCCAGC 4 cut(s) 418, 536, 2059, 2177
PspGI CCWGG 6 cut(s) 151, 363, 693, 1792, 2004, 2334
PspN4I GGNNCC 6 cut(s) 555, 2196, 3544, 4116, 4372, 4436
PspPI GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
PspPPI RGGWCCY 2 cut(s) 523, 2164
PspXI VCTCGAGB 1 cut(s) 4409
PsrI GAACNNNNNNTAC 4 cut(s) 305, 337, 1946, 1978
PstI CTGCAG 1 cut(s) 4180
PstNI CAGNNNCTG 5 cut(s) 56, 68, 1709, 4175, 4205
PsuI RGATCY 4 cut(s) 889, 1278, 2530, 2919
PvuII CAGCTG 6 cut(s) 56, 68, 422, 1697, 1709, 2063
RsaI GTAC 6 cut(s) 1388, 3029, 3618, 3935, 4001, 4174
RsaNI GTAC 6 cut(s) 1387, 3028, 3617, 3934, 4000, 4173
RseI CAYNNNNRTG 5 cut(s) 1438, 3079, 3587, 3760, 4382
SacI GAGCTC 4 cut(s) 111, 1597, 1752, 3238
SapI GCTCTTC 1 cut(s) 3698
SaqAI TTAA 9 cut(s) 98, 374, 1170, 1392, 1739, 2015, 2811, 3033, 4472
Sau96I GGNCC 7 cut(s) 523, 554, 914, 2164, 2195, 2555, 3347
ScaI AGTACT 3 cut(s) 1388, 3029, 3618
SduI GDGCHC 9 cut(s) 111, 1167, 1424, 1597, 1752, 2808, 3065, 3238, 4410
SfaNI GCATC 9 cut(s) 448, 711, 2089, 2352, 3724, 3764, 3925, 4129, 4153
SfcI CTRYAG 2 cut(s) 4176, 4218
Sfr274I CTCGAG 1 cut(s) 4409
SfuI TTCGAA 2 cut(s) 1187, 2828
SinI GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
SlaI CTCGAG 1 cut(s) 4409
SmiMI CAYNNNNRTG 5 cut(s) 1438, 3079, 3587, 3760, 4382
SsiI CCGC 1 cut(s) 4118
SstI GAGCTC 4 cut(s) 111, 1597, 1752, 3238
StyI CCWWGG 5 cut(s) 707, 2348, 3726, 4191, 4458
TaiI ACGT 1 cut(s) 3752
TaqI TCGA 7 cut(s) 1187, 2828, 4269, 4325, 4410, 4450, 4489
TatI WGTACW 4 cut(s) 1386, 3027, 3616, 3999
Tru1I TTAA 9 cut(s) 98, 374, 1170, 1392, 1739, 2015, 2811, 3033, 4472
Tru9I TTAA 9 cut(s) 98, 374, 1170, 1392, 1739, 2015, 2811, 3033, 4472
TseFI GTSAC 4 cut(s) 483, 661, 2124, 2302
Tsp45I GTSAC 4 cut(s) 483, 661, 2124, 2302
VpaK11BI GGWCC 5 cut(s) 523, 554, 2164, 2195, 3347
XapI RAATTY 7 cut(s) 1289, 1462, 2930, 3103, 4130, 4272, 4297
XbaI TCTAGA 4 cut(s) 235, 934, 1876, 2575
XcmI CCANNNNNNNNNTGG 3 cut(s) 419, 2060, 3724
XhoI CTCGAG 1 cut(s) 4409
XmiI GTMKAC 5 cut(s) 1112, 1320, 2753, 2961, 4245
XmnI GAANNNNTTC 4 cut(s) 401, 2042, 3707, 4335
ZraI GACGTC 1 cut(s) 3750
ZrmI AGTACT 3 cut(s) 1388, 3029, 3618
Zsp2I ATGCAT 3 cut(s) 463, 2104, 3739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.