Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005139.1

Orthogroup ID

OG0010595

Physical Location & Seq

Genomic Coordinates Forward (+)

122522 .. 127699

Gene Structure 5178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

atgttggttccttcaagtggcgaacgagctgttcagacggttgttgctgggattctccacgatgtcgttgatgacacgtgcgaaagtttcaaccgcatagaacaagaatttggcgatgatgtagccaagctcgtagctggagtttccaggttaagttacataaaccagcttttgcggagacaccgcaggataaatgtgaatgacgggagacttggtcacgaggaggcaaataacttacgagtcatgctcttgggcatggttgatgatccacgtgtagtgcttataaagcttgcagatcgtcttcacaatatgagaacaatttacgctctgcctccggcaaaagctcaagctgttgctagggagaccttggtgatttggtgttctctagcatccagattgggtttgtgggctatgaaagctgaactggaagatctgtgctttgctgttcttcagcctcaaatgtttaagaacatgagagctgatctagcatccatgtggagctctagcagcaaagtaggaaatttgaaaagaatatctgcaagatccaccttaaatggaggaagctcagtttcagacaatgaaggatccatgaatgatgaagatgtcacaaccatgaaggatctcttggaagccgtagtacctttcgatgtattgttagatcggagaaaacggtctaattttctaagtactctagaacaagatttggagactcataaaagaccaaaggttgtgcatgatgctggaattgctttagcatctctggtaatttgtgaggaggcacttgagcaggagttgatcatatcaacttcttatgttccagggatggaagtaactttatccagccgtttaaaaagtttgtatagcatctacagcaagatgaaacgaaaagatgtcagcatcaataaagtttatgatgcccgtgcattaagggtagttgttggagacaagaatggaactttgcatggacctgctgtccaatgttgctacagtcttcttgacactgtgcacaagcattggacaccaattgatggtgagtttgatgattacattgtcaatccaaagcccagtggctatcagtctctgcacactgcagtacaaggtcctgacaaatcacctttggaagttcaaatacgaacgcagaggatgcacgagtatgcagaacatggacttgcagcacactggctttataaagagactggaaacaagctgtctgacagaagcagcactgatgaatctgaaatagatgcaacatcctttatctccaaaactatggacgaccaaaatgatagagaaattgatttctttgagaagtatagtatgttgaaaattgggcatccagttcttagagtggatggaagtcatcttcttgctgcagttgtcattagggtagagaaggatggaagggaattactcgttgccgtgagctttgcactagaagcttcagaagcagtcgctgatagaaaatattcttttcaaaaacaacggtgggaagcctatgcaaggttatataagaaggtttctgatgaatggtggtgtgaaccaggacatggggattggtgcacttgcctagagaaatatacactttgtcgagatggtatgtaccacaaggaagatcagtttgggagattactgccgacattcattcaggtgattgatttgacagatgaagaagaatctgaatattgggctgttgtttctgctatctttgagggaagacagcttgattacattacacctacgccaagatttaactcagttacatcaacttccatggaaactagcatcaataacaaggtgcatttgctaaggacaatgctacggtgggaggagcaattacggtctgaagcaatttatggaaatggacaagccatgtatcgacggggttctgttgtccttggggaagtggtgattatatgttggccgcatggcgaaataatgaggttgacaacaggcagcactgccgcagatgctgctagaaggaaaggactggacggaaaactggttttggttaatggtcagctggtgttgcccaatacaaagctcacagatggtgatgtggttgaagtcagagcgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0008728 GO:0008893 GO:0009116 GO:0009117 GO:0009119 GO:0009150 GO:0009259 GO:0009605 GO:0009987 GO:0009991 GO:0015969 GO:0016020 GO:0016740 GO:0016772 GO:0016778 GO:0016787 GO:0016788 GO:0016794 GO:0019637 GO:0019693 GO:0030312 GO:0031667 GO:0033865 GO:0033875 GO:0034032 GO:0034035 GO:0034641 GO:0042278 GO:0042578 GO:0042594 GO:0044237 GO:0044238 GO:0044281 GO:0044464 GO:0046128 GO:0046483 GO:0050896 GO:0055086 GO:0071704 GO:0071944 GO:0072521 GO:1901068 GO:1901135 GO:1901360 GO:1901564 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

HD_4 RelA_SpoT TGS

Protein Analysis

691

Amino Acids

77.88

Weight (kDa)

5.88

Isoelectric Point (pI)

37.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HD	PF01966	9 - 104	6.2e-06	HD domain
HD_4	PF13328	12 - 136	1.1e-35	HD domain
RelA_SpoT	PF04607	281 - 400	7e-36	Region found in RelA / SpoT proteins
DUF7589	PF24500	437 - 571	3.1e-75	Domain of unknown function (DUF7589)
TGS	PF02824	637 - 689	9.8e-06	TGS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010595)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g33820 FvH4_7g33820
malus_domestica	MD07G1306500.v1.1
prunus_persica	Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1 Prupe.2G324500_v2.0.a1
pyrus_communis	pycom07g27950
rosa_chinensis	RchiOBHm_Chr1g0383931
rosa_laevigata	RLG00000026085
rosa_multiflora	Rmu_sc0005139.1_g000026
rosa_roxburghii	Rroxscaffold_4G00277130
rosa_rugosa	Rorug01G0443100 Rorug01G0443200 Rorug01G0443400.1 Rorug01G0443500.1
rosa_samantha	Rh1AG469100 Rh1CG439600 Rh1DG459600
rosa_wichuraiana	Rw1G040330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	284, 1188
Acc36I	ACCTGC	1 cut(s)	976
AccB7I	CCANNNNNTGG	2 cut(s)	1028, 1547
AciI	CCGC	5 cut(s)	94, 175, 184, 1922, 1962
AclWI	GGATC	5 cut(s)	260, 537, 579, 592, 627
AcoI	YGGCCR	1 cut(s)	1919
AcsI	RAATTY	2 cut(s)	107, 520
AcuI	CTGAAG	3 cut(s)	434, 1425, 1863
AcvI	CACGTG	2 cut(s)	78, 272
AfaI	GTAC	4 cut(s)	639, 688, 1095, 1601
AfiI	CCNNNNNNNGG	4 cut(s)	17, 1028, 1500, 1547
AflIII	ACRYGT	2 cut(s)	75, 271
AgsI	TTSAA	7 cut(s)	15, 91, 526, 1127, 1324, 1475, 2063
AhdI	GACNNNNNGTC	1 cut(s)	971
AjnI	CCWGG	3 cut(s)	146, 817, 1540
AjuI	GAANNNNNNNTTGG	6 cut(s)	93, 125, 608, 640, 1602, 1634
Alw21I	GWGCWC	3 cut(s)	503, 1008, 1562
Alw26I	GTCTC	7 cut(s)	172, 202, 356, 701, 936, 1083, 1187
Alw44I	GTGCAC	2 cut(s)	1004, 1558
AlwI	GGATC	5 cut(s)	260, 537, 579, 592, 627
AlwNI	CAGNNNCTG	3 cut(s)	1081, 1454, 1970
AoxI	GGCC	1 cut(s)	1919
ApaLI	GTGCAC	2 cut(s)	1004, 1558
ApeKI	GCWGC	6 cut(s)	507, 1172, 1221, 1370, 1953, 1970
ApoI	RAATTY	2 cut(s)	107, 520
Asp700I	GAANNNNTTC	1 cut(s)	1465
AspS9I	GGNCC	2 cut(s)	965, 1100
AsuHPI	GGTGA	6 cut(s)	382, 1043, 1104, 1660, 1918, 2063
AvaII	GGWCC	2 cut(s)	965, 1100
BaeGI	GKGCMC	2 cut(s)	1008, 1562
BamHI	GGATCC	1 cut(s)	584
BanII	GRGCYC	1 cut(s)	503
BarI	GAAGNNNNNNTAC	4 cut(s)	621, 653, 1113, 1145
BauI	CACGAG	2 cut(s)	218, 1148
BbrPI	CACGTG	2 cut(s)	78, 272
BbsI	GAAGAC	3 cut(s)	293, 983, 1720
Bbv12I	GWGCWC	3 cut(s)	503, 1008, 1562
BbvI	GCAGC	6 cut(s)	519, 1184, 1233, 1357, 1957, 1965
BccI	CCATC	6 cut(s)	817, 1022, 1346, 1391, 1586, 2042
BceAI	ACGGC	3 cut(s)	617, 828, 1403
BciT130I	CCWGG	3 cut(s)	148, 819, 1542
BclI	TGATCA	1 cut(s)	795
BcoDI	GTCTC	7 cut(s)	172, 202, 356, 701, 936, 1083, 1187
BfaI	CTAG	9 cut(s)	357, 386, 485, 504, 692, 1433, 1568, 1779, 1974
BfmI	CTRYAG	4 cut(s)	868, 985, 1089, 1371
BfuAI	ACCTGC	1 cut(s)	976
BglII	AGATCT	1 cut(s)	430
BisI	GCNGC	8 cut(s)	508, 1173, 1222, 1371, 1922, 1954, 1962, 1971
BlsI	GCNGC	8 cut(s)	509, 1174, 1223, 1372, 1923, 1955, 1963, 1972
BmcAI	AGTACT	1 cut(s)	688
Bme1390I	CCNGG	3 cut(s)	148, 819, 1542
Bme18I	GGWCC	2 cut(s)	965, 1100
BmeRI	GACNNNNNGTC	1 cut(s)	971
BmgT120I	GGNCC	2 cut(s)	965, 1100
BmiI	GGNNCC	2 cut(s)	9, 586
BmrFI	CCNGG	3 cut(s)	148, 819, 1542
BmrI	ACTGGG	1 cut(s)	1059
BmuI	ACTGGG	1 cut(s)	1059
BpiI	GAAGAC	3 cut(s)	293, 983, 1720
BplI	GAGNNNNNCTC	2 cut(s)	231, 263
BpmI	CTGGAG	1 cut(s)	159
Bpu10I	CCTNAGC	1 cut(s)	1805
BpuEI	CTTGAG	2 cut(s)	330, 803
BsaAI	YACGTR	2 cut(s)	78, 272
BsaI	GGTCTC	1 cut(s)	356
BsaJI	CCNNGG	4 cut(s)	366, 818, 1770, 1894
BsaXI	ACNNNNNCTCC	2 cut(s)	199, 229
Bsc4I	CCNNNNNNNGG	4 cut(s)	17, 1028, 1500, 1547
Bse1I	ACTGG	7 cut(s)	429, 1065, 1184, 1201, 1337, 1992, 2004
BseBI	CCWGG	3 cut(s)	148, 819, 1542
BseDI	CCNNGG	4 cut(s)	366, 818, 1770, 1894
BseGI	GGATG	8 cut(s)	389, 488, 828, 1149, 1250, 1333, 1357, 1402
BseLI	CCNNNNNNNGG	4 cut(s)	17, 1028, 1500, 1547
BseMII	CTCAG	2 cut(s)	579, 1767
BseNI	ACTGG	7 cut(s)	429, 1065, 1184, 1201, 1337, 1992, 2004
BseRI	GAGGAG	3 cut(s)	236, 788, 1841
BseSI	GKGCMC	2 cut(s)	1008, 1562
BseXI	GCAGC	6 cut(s)	519, 1184, 1233, 1357, 1957, 1965
BseYI	CCCAGC	1 cut(s)	47
BsgI	GTGCAG	1 cut(s)	1067
BshFI	GGCC	1 cut(s)	1921
BsiHKAI	GWGCWC	3 cut(s)	503, 1008, 1562
BsiSI	CCGG	1 cut(s)	335
BslI	CCNNNNNNNGG	4 cut(s)	17, 1028, 1500, 1547
BsmAI	GTCTC	7 cut(s)	172, 202, 356, 701, 936, 1083, 1187
BsnI	GGCC	1 cut(s)	1921
Bso31I	GGTCTC	1 cut(s)	356
Bsp1286I	GDGCHC	3 cut(s)	503, 1008, 1562
Bsp19I	CCATGG	1 cut(s)	1770
BspACI	CCGC	5 cut(s)	94, 175, 184, 1922, 1962
BspANI	GGCC	1 cut(s)	1921
BspCNI	CTCAG	2 cut(s)	578, 1766
BspLI	GGNNCC	2 cut(s)	9, 586
BspMAI	CTGCAG	2 cut(s)	1093, 1375
BspMI	ACCTGC	1 cut(s)	976
BspPI	GGATC	5 cut(s)	260, 537, 579, 592, 627
BspTNI	GGTCTC	1 cut(s)	356
BsrI	ACTGG	7 cut(s)	429, 1065, 1184, 1201, 1337, 1992, 2004
BssECI	CCNNGG	4 cut(s)	366, 818, 1770, 1894
BssSI	CACGAG	2 cut(s)	218, 1148
BssT1I	CCWWGG	3 cut(s)	366, 1770, 1894
Bst2BI	CACGAG	2 cut(s)	218, 1148
Bst2UI	CCWGG	3 cut(s)	148, 819, 1542
Bst4CI	ACNGT	7 cut(s)	40, 672, 989, 1003, 1485, 1821, 1839
BstAPI	GCANNNNNTGC	2 cut(s)	1144, 1970
BstBAI	YACGTR	2 cut(s)	78, 272
BstC8I	GCNNGC	1 cut(s)	291
BstDEI	CTNAG	5 cut(s)	565, 683, 1343, 1753, 1805
BstDSI	CCRYGG	1 cut(s)	1770
BstENI	CCTNNNNNAGG	1 cut(s)	1498
BstF5I	GGATG	8 cut(s)	389, 488, 828, 1149, 1250, 1333, 1357, 1402
BstMAI	GTCTC	7 cut(s)	172, 202, 356, 701, 936, 1083, 1187
BstNI	CCWGG	3 cut(s)	148, 819, 1542
BstSCI	CCNGG	3 cut(s)	146, 817, 1540
BstSFI	CTRYAG	4 cut(s)	868, 985, 1089, 1371
BstSLI	GKGCMC	2 cut(s)	1008, 1562
BstV1I	GCAGC	6 cut(s)	519, 1184, 1233, 1357, 1957, 1965
BstV2I	GAAGAC	3 cut(s)	293, 983, 1720
BstX2I	RGATCY	4 cut(s)	430, 542, 584, 619
BstXI	CCANNNNNNTGG	1 cut(s)	1270
BstYI	RGATCY	4 cut(s)	430, 542, 584, 619
BsuRI	GGCC	1 cut(s)	1921
BtgI	CCRYGG	1 cut(s)	1770
BtgZI	GCGATG	1 cut(s)	129
BtsCI	GGATG	8 cut(s)	389, 488, 828, 1149, 1250, 1333, 1357, 1402
BtsI	GCAGTG	2 cut(s)	1086, 1956
BtsIMutI	CAGTG	6 cut(s)	999, 1072, 1086, 1177, 1224, 1956
BveI	ACCTGC	1 cut(s)	976
Cac8I	GCNNGC	1 cut(s)	291
CaiI	CAGNNNCTG	3 cut(s)	1081, 1454, 1970
Cfr13I	GGNCC	2 cut(s)	965, 1100
Csp6I	GTAC	4 cut(s)	638, 687, 1094, 1600
CviQI	GTAC	4 cut(s)	638, 687, 1094, 1600
DdeI	CTNAG	5 cut(s)	565, 683, 1343, 1753, 1805
DraI	TTTAAA	1 cut(s)	849
DriI	GACNNNNNGTC	1 cut(s)	971
EaeI	YGGCCR	1 cut(s)	1919
Eam1105I	GACNNNNNGTC	1 cut(s)	971
Ecl136II	GAGCTC	1 cut(s)	501
Eco130I	CCWWGG	3 cut(s)	366, 1770, 1894
Eco24I	GRGCYC	1 cut(s)	503
Eco31I	GGTCTC	1 cut(s)	356
Eco47I	GGWCC	2 cut(s)	965, 1100
Eco53kI	GAGCTC	1 cut(s)	501
Eco57I	CTGAAG	3 cut(s)	434, 1425, 1863
Eco72I	CACGTG	2 cut(s)	78, 272
EcoICRI	GAGCTC	1 cut(s)	501
EcoNI	CCTNNNNNAGG	1 cut(s)	1498
EcoO109I	RGGNCCY	1 cut(s)	1100
EcoRII	CCWGG	3 cut(s)	146, 817, 1540
EcoT14I	CCWWGG	3 cut(s)	366, 1770, 1894
EcoT38I	GRGCYC	1 cut(s)	503
ErhI	CCWWGG	3 cut(s)	366, 1770, 1894
FalI	AAGNNNNNCTT	2 cut(s)	608, 640
FbaI	TGATCA	1 cut(s)	795
Fnu4HI	GCNGC	8 cut(s)	508, 1173, 1222, 1371, 1922, 1954, 1962, 1971
FokI	GGATG	8 cut(s)	376, 475, 835, 1156, 1237, 1320, 1364, 1409
FriOI	GRGCYC	1 cut(s)	503
Fsp4HI	GCNGC	8 cut(s)	508, 1173, 1222, 1371, 1922, 1954, 1962, 1971
FspBI	CTAG	9 cut(s)	357, 386, 485, 504, 692, 1433, 1568, 1779, 1974
GluI	GCNGC	8 cut(s)	508, 1173, 1222, 1371, 1922, 1954, 1962, 1971
GsaI	CCCAGC	1 cut(s)	51
GsuI	CTGGAG	1 cut(s)	159
HaeIII	GGCC	1 cut(s)	1921
HapII	CCGG	1 cut(s)	335
HincII	GTYRAC	1 cut(s)	1944
HindII	GTYRAC	1 cut(s)	1944
HindIII	AAGCTT	2 cut(s)	287, 1437
HinfI	GANTC	5 cut(s)	52, 240, 709, 1232, 1673
HpaII	CCGG	1 cut(s)	335
HphI	GGTGA	6 cut(s)	382, 1043, 1104, 1660, 1918, 2063
Hpy166II	GTNNAC	4 cut(s)	1006, 1538, 1560, 1944
Hpy188III	TCNNGA	6 cut(s)	218, 393, 692, 995, 1103, 1589
Hpy8I	GTNNAC	4 cut(s)	1006, 1538, 1560, 1944
Hpy99I	CGWCG	1 cut(s)	1881
HpyAV	CCTTC	7 cut(s)	21, 575, 610, 1387, 1395, 1507, 1971
HpyCH4III	ACNGT	7 cut(s)	40, 672, 989, 1003, 1485, 1821, 1839
HpyCH4IV	ACGT	2 cut(s)	77, 271
HpyF3I	CTNAG	5 cut(s)	565, 683, 1343, 1753, 1805
HpySE526I	ACGT	2 cut(s)	77, 271
Ksp22I	TGATCA	1 cut(s)	795
LmnI	GCTCC	2 cut(s)	498, 1828
Lsp1109I	GCAGC	6 cut(s)	519, 1184, 1233, 1357, 1957, 1965
MaeI	CTAG	9 cut(s)	357, 386, 485, 504, 692, 1433, 1568, 1779, 1974
MaeII	ACGT	2 cut(s)	77, 271
MaeIII	GTNAC	5 cut(s)	155, 215, 604, 829, 1756
MfeI	CAATTG	1 cut(s)	1023
MflI	RGATCY	4 cut(s)	430, 542, 584, 619
MhlI	GDGCHC	3 cut(s)	503, 1008, 1562
MlyI	GAGTC	2 cut(s)	249, 703
MmeI	TCCRAC	1 cut(s)	919
MroXI	GAANNNNTTC	1 cut(s)	1465
MseI	TTAA	7 cut(s)	152, 465, 551, 848, 926, 1749, 2010
MslI	CAYNNNNRTG	4 cut(s)	493, 611, 1152, 1646
MspA1I	CMGCKG	1 cut(s)	2020
MspI	CCGG	1 cut(s)	335
MspR9I	CCNGG	3 cut(s)	148, 819, 1542
MunI	CAATTG	1 cut(s)	1023
MvaI	CCWGG	3 cut(s)	148, 819, 1542
NcoI	CCATGG	1 cut(s)	1770
NlaIV	GGNNCC	2 cut(s)	9, 586
NmuCI	GTSAC	2 cut(s)	215, 604
PdmI	GAANNNNTTC	1 cut(s)	1465
PfeI	GAWTC	3 cut(s)	52, 1232, 1673
PflFI	GACNNNGTC	1 cut(s)	213
PflMI	CCANNNNNTGG	2 cut(s)	1028, 1547
PkrI	GCNGC	8 cut(s)	509, 1174, 1223, 1372, 1923, 1955, 1963, 1972
PleI	GAGTC	2 cut(s)	248, 703
PmaCI	CACGTG	2 cut(s)	78, 272
PmlI	CACGTG	2 cut(s)	78, 272
PpsI	GAGTC	2 cut(s)	248, 703
Ppu21I	YACGTR	2 cut(s)	78, 272
PpuMI	RGGWCCY	1 cut(s)	1100
PsiI	TTATAA	2 cut(s)	284, 1188
Psp124BI	GAGCTC	1 cut(s)	503
Psp5II	RGGWCCY	1 cut(s)	1100
Psp6I	CCWGG	3 cut(s)	146, 817, 1540
PspCI	CACGTG	2 cut(s)	78, 272
PspFI	CCCAGC	1 cut(s)	47
PspGI	CCWGG	3 cut(s)	146, 817, 1540
PspN4I	GGNNCC	2 cut(s)	9, 586
PspPI	GGNCC	2 cut(s)	965, 1100
PspPPI	RGGWCCY	1 cut(s)	1100
PstI	CTGCAG	2 cut(s)	1093, 1375
PstNI	CAGNNNCTG	3 cut(s)	1081, 1454, 1970
PsuI	RGATCY	4 cut(s)	430, 542, 584, 619
PsyI	GACNNNGTC	1 cut(s)	213
PvuII	CAGCTG	1 cut(s)	2020
RsaI	GTAC	4 cut(s)	639, 688, 1095, 1601
RsaNI	GTAC	4 cut(s)	638, 687, 1094, 1600
RseI	CAYNNNNRTG	4 cut(s)	493, 611, 1152, 1646
SacI	GAGCTC	1 cut(s)	503
SaqAI	TTAA	7 cut(s)	152, 465, 551, 848, 926, 1749, 2010
SatI	GCNGC	8 cut(s)	508, 1173, 1222, 1371, 1922, 1954, 1962, 1971
Sau96I	GGNCC	2 cut(s)	965, 1100
ScaI	AGTACT	1 cut(s)	688
SchI	GAGTC	2 cut(s)	249, 703
ScrFI	CCNGG	3 cut(s)	148, 819, 1542
SduI	GDGCHC	3 cut(s)	503, 1008, 1562
SfcI	CTRYAG	4 cut(s)	868, 985, 1089, 1371
SinI	GGWCC	2 cut(s)	965, 1100
SmiMI	CAYNNNNRTG	4 cut(s)	493, 611, 1152, 1646
SmlI	CTYRAG	2 cut(s)	345, 782
SmoI	CTYRAG	2 cut(s)	345, 782
SsiI	CCGC	5 cut(s)	94, 175, 184, 1922, 1962
SspI	AATATT	2 cut(s)	1466, 1682
SspMI	CTAG	9 cut(s)	357, 386, 485, 504, 692, 1433, 1568, 1779, 1974
SstI	GAGCTC	1 cut(s)	503
StyD4I	CCNGG	3 cut(s)	146, 817, 1540
StyI	CCWWGG	3 cut(s)	366, 1770, 1894
TaaI	ACNGT	7 cut(s)	40, 672, 989, 1003, 1485, 1821, 1839
TaiI	ACGT	2 cut(s)	80, 274
TaqI	TCGA	3 cut(s)	645, 1588, 1876
TatI	WGTACW	2 cut(s)	686, 1093
TauI	GCSGC	2 cut(s)	1924, 1964
TfiI	GAWTC	3 cut(s)	52, 1232, 1673
Tru1I	TTAA	7 cut(s)	152, 465, 551, 848, 926, 1749, 2010
Tru9I	TTAA	7 cut(s)	152, 465, 551, 848, 926, 1749, 2010
TscAI	CASTG	6 cut(s)	1006, 1072, 1093, 1184, 1231, 1963
TseFI	GTSAC	2 cut(s)	215, 604
TseI	GCWGC	6 cut(s)	507, 1172, 1221, 1370, 1953, 1970
Tsp45I	GTSAC	2 cut(s)	215, 604
TspGWI	ACGGA	1 cut(s)	2007
TspRI	CASTG	6 cut(s)	1006, 1072, 1093, 1184, 1231, 1963
Tth111I	GACNNNGTC	1 cut(s)	213
Van91I	CCANNNNNTGG	2 cut(s)	1028, 1547
VneI	GTGCAC	2 cut(s)	1004, 1558
VpaK11BI	GGWCC	2 cut(s)	965, 1100
XagI	CCTNNNNNAGG	1 cut(s)	1498
XapI	RAATTY	2 cut(s)	107, 520
XbaI	TCTAGA	1 cut(s)	691
XmnI	GAANNNNTTC	1 cut(s)	1465
XspI	CTAG	9 cut(s)	357, 386, 485, 504, 692, 1433, 1568, 1779, 1974
ZrmI	AGTACT	1 cut(s)	688

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.