Rmu_sc0005363.1_g000051

Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005363.1
Physical Location & Seq
Reverse (-)
191204 .. 194541
3338 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005363.1_g000051.1.cds

Sequence Viewer

Length: 1941 bp
atgatcaatgacaccctcaacactgctgcaaagcttcagatggccatgattgtgacagaagtttacctctcggggcttccgaaggacactccatttcaaaattttgaacttaggtttaaggagtggggctttgagaagggttggggagacacagcagagagatccaaggaaacaatgagaatactatcagaagtactacaagctccagatccacttaacatggagaggtttttgagcaggcttcctaccatattcaatgttgtaatattctctcctcatggctattttggccaagctgatgttcttggtttgccagacaccggtggacaggttgtttatattcttgatcaagttaaagctctggaagaagaattgctccttagaattaagcaacaagggcttgctgtgaagcctcagatttttgtggtaacaagactcattcctgaagcaaggggaactacgtgcaatcaggagttggaaccgatcaatggcaccaagtactcaaacattcttagggttccatttaggacagaaaagggggtccttcgtcgttgggtttctcgttttgatatctacccctatcttgagctgtttgtgcaggatgctacagccaaaatcctcgacctcatggacgggaagcctgatcttattattggaaattacactgatgggaatttggtggcctctctgatggctaacaaacttggaataactcaggcaacaattgcacatgctttggagaagaccaagtatgaagactcagacatcaagtggaaggaattagaccctaagtatcacttctcatgccaatttctagcagacacaatttcaatgaatgcaacagattttgtcattgcaagcacattccaggaaattgcaggaagccaagacagaccaggacaatatgaaagccataccgcatttactctcccagggctttgtagagttgtttcaggcatcaatgtattcgatcccaaatttaacattgctgcacctggggctgaccagtctgtctattttccttacactgagaaacaaaaaagagtctcatcatttcatcctgccattgaagaactactgtatagcaaggaggataacaatgaacatgtggggtttctagtggataggaagaaacctatcatcttctcaatggcaaggcttgacactgttaagaacattactggtttagttgaatggtatggcaaaaacaagaggctcagaaatctggttaaccttgtagtagttggaggcttctttgacccttcaaaatcaaaagatagagaggaaatagcagaaattaaaaagatgcattcactgatagagaagtaccagctccagggtcagatcagatggatagcagcacagactgataggaaccgcaatggagaactctaccgttgtattgcggacaccaggggagcttttgtccaacctgctctatatgaagcttttggtcttactgtcattgaggcaatgaactgtggtttacccacttttgcaaccaaccaaggagggccagctgaaatcattgttgatgggatctctggtttccatattgatcccaacaatggtgatgatgcaagcagcaaaattgccgatttctttgagaaatgcaaaactgaggctacatactgggacaattattcaaaagcgggtttgcaacgcatttatgaatgctacacttggaagatatatgcaaacaaggtgttgaacatgggctgcacttatacattctggaggcagttgaacaaagagcagaaacaggcaaagcaaagatacatccagatgttctttaatctccaatatagaaatttggtgaagaatgtgcctatcccaagtgacgagcctgaaaaaccagcaccaaagccagtcaccaaatcacagacgactctaagcactagacgctcacagtcccgattgcaaaggttgtttggagcctga

Protein Analysis

646

Amino Acids

73.5

Weight (kDa)

8.18

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1010
Acc36I ACCTGC 1 cut(s) 1441
AccB1I GGYRCC 1 cut(s) 491
AciI CCGC 4 cut(s) 918, 1378, 1406, 1652
AclWI GGATC 5 cut(s) 156, 203, 965, 1547, 1553
AcoI YGGCCR 2 cut(s) 42, 289
AcsI RAATTY 4 cut(s) 100, 673, 977, 1810
AcuI CTGAAG 2 cut(s) 20, 465
AfaI GTAC 3 cut(s) 195, 500, 1328
AfiI CCNNNNNNNGG 4 cut(s) 320, 488, 1336, 1568
AflIII ACRYGT 1 cut(s) 1105
AgeI ACCGGT 1 cut(s) 320
AjnI CCWGG 6 cut(s) 867, 895, 931, 994, 1335, 1412
AjuI GAANNNNNNNTTGG 2 cut(s) 285, 317
AluBI AGCT 9 cut(s) 34, 203, 296, 359, 589, 1333, 1421, 1448, 1520
AluI AGCT 9 cut(s) 34, 203, 296, 359, 589, 1333, 1421, 1448, 1520
Alw26I GTCTC 2 cut(s) 141, 1051
AlwI GGATC 5 cut(s) 156, 203, 965, 1547, 1553
Ama87I CYCGRG 1 cut(s) 70
AoxI GGCC 4 cut(s) 42, 289, 681, 1514
ApeKI GCWGC 5 cut(s) 26, 989, 1358, 1584, 1719
ApoI RAATTY 4 cut(s) 100, 673, 977, 1810
AsiGI ACCGGT 1 cut(s) 320
AspS9I GGNCC 2 cut(s) 541, 1514
AsuHPI GGTGA 3 cut(s) 1583, 1828, 1864
AvaI CYCGRG 1 cut(s) 70
AvaII GGWCC 1 cut(s) 541
BalI TGGCCA 2 cut(s) 44, 291
BanI GGYRCC 1 cut(s) 491
BbsI GAAGAC 2 cut(s) 749, 762
BbvI GCAGC 5 cut(s) 13, 976, 1370, 1596, 1706
BccI CCATC 5 cut(s) 34, 662, 685, 1344, 1529
BciT130I CCWGG 6 cut(s) 869, 897, 933, 996, 1337, 1414
BclI TGATCA 2 cut(s) 3, 346
BcoDI GTCTC 2 cut(s) 141, 1051
BfaI CTAG 3 cut(s) 815, 1118, 1899
BfmI CTRYAG 1 cut(s) 606
BfuAI ACCTGC 1 cut(s) 1441
BisI GCNGC 5 cut(s) 27, 990, 1359, 1585, 1720
BlsI GCNGC 5 cut(s) 28, 991, 1360, 1586, 1721
BmcAI AGTACT 2 cut(s) 195, 500
Bme1390I CCNGG 6 cut(s) 869, 897, 933, 996, 1337, 1414
Bme18I GGWCC 1 cut(s) 541
BmeT110I CYCGRG 1 cut(s) 70
BmgT120I GGNCC 2 cut(s) 541, 1514
BmiI GGNNCC 6 cut(s) 480, 493, 519, 542, 1376, 1936
BmrFI CCNGG 6 cut(s) 869, 897, 933, 996, 1337, 1414
BmrI ACTGGG 1 cut(s) 1642
BmsI GCATC 4 cut(s) 592, 966, 1296, 1567
BmuI ACTGGG 1 cut(s) 1642
BpiI GAAGAC 2 cut(s) 749, 762
BpmI CTGGAG 3 cut(s) 189, 1319, 1756
BpuEI CTTGAG 1 cut(s) 605
BsaAI YACGTR 1 cut(s) 462
BsaJI CCNNGG 7 cut(s) 165, 931, 932, 995, 1336, 1413, 1507
BsaWI WCCGGW 1 cut(s) 320
BsaXI ACNNNNNCTCC 2 cut(s) 1410, 1440
Bsc4I CCNNNNNNNGG 4 cut(s) 320, 488, 1336, 1568
Bse118I RCCGGY 1 cut(s) 320
Bse1I ACTGG 4 cut(s) 1006, 1186, 1637, 1868
Bse3DI GCAATG 4 cut(s) 852, 984, 1387, 1479
BseBI CCWGG 6 cut(s) 869, 897, 933, 996, 1337, 1414
BseDI CCNNGG 7 cut(s) 165, 931, 932, 995, 1336, 1413, 1507
BseGI GGATG 3 cut(s) 607, 1057, 1779
BseLI CCNNNNNNNGG 4 cut(s) 320, 488, 1336, 1568
BseMI GCAATG 4 cut(s) 852, 984, 1387, 1479
BseMII CTCAG 6 cut(s) 428, 728, 774, 1020, 1231, 1611
BseNI ACTGG 4 cut(s) 1006, 1186, 1637, 1868
BseRI GAGGAG 1 cut(s) 264
BseXI GCAGC 5 cut(s) 13, 976, 1370, 1596, 1706
BsgI GTGCAG 3 cut(s) 617, 975, 1705
BshFI GGCC 4 cut(s) 44, 291, 683, 1516
BshNI GGYRCC 1 cut(s) 491
BshTI ACCGGT 1 cut(s) 320
BsiHKCI CYCGRG 1 cut(s) 70
BsiSI CCGG 1 cut(s) 321
BslFI GGGAC 2 cut(s) 1649, 1897
BslI CCNNNNNNNGG 4 cut(s) 320, 488, 1336, 1568
BsmAI GTCTC 2 cut(s) 141, 1051
BsmFI GGGAC 2 cut(s) 1649, 1897
BsmI GAATGC 3 cut(s) 841, 1309, 1679
BsnI GGCC 4 cut(s) 44, 291, 683, 1516
BsoBI CYCGRG 1 cut(s) 70
BspACI CCGC 4 cut(s) 918, 1378, 1406, 1652
BspANI GGCC 4 cut(s) 44, 291, 683, 1516
BspCNI CTCAG 6 cut(s) 427, 727, 773, 1021, 1230, 1612
BspLI GGNNCC 6 cut(s) 480, 493, 519, 542, 1376, 1936
BspMI ACCTGC 1 cut(s) 1441
BspPI GGATC 5 cut(s) 156, 203, 965, 1547, 1553
BspT107I GGYRCC 1 cut(s) 491
BsrDI GCAATG 4 cut(s) 852, 984, 1387, 1479
BsrFI RCCGGY 1 cut(s) 320
BsrI ACTGG 4 cut(s) 1006, 1186, 1637, 1868
BssAI RCCGGY 1 cut(s) 320
BssECI CCNNGG 7 cut(s) 165, 931, 932, 995, 1336, 1413, 1507
BssT1I CCWWGG 2 cut(s) 165, 1507
Bst2UI CCWGG 6 cut(s) 869, 897, 933, 996, 1337, 1414
Bst4CI ACNGT 6 cut(s) 1080, 1168, 1397, 1462, 1481, 1911
BstAPI GCANNNNNTGC 1 cut(s) 725
BstBAI YACGTR 1 cut(s) 462
BstC8I GCNNGC 5 cut(s) 239, 402, 859, 1518, 1582
BstF5I GGATG 3 cut(s) 607, 1057, 1779
BstMAI GTCTC 2 cut(s) 141, 1051
BstMWI GCNNNNNNNGC 6 cut(s) 288, 397, 595, 725, 998, 1902
BstNI CCWGG 6 cut(s) 869, 897, 933, 996, 1337, 1414
BstNSI RCATGY 2 cut(s) 734, 1109
BstSCI CCNGG 6 cut(s) 867, 895, 931, 994, 1335, 1412
BstSFI CTRYAG 1 cut(s) 606
BstV1I GCAGC 5 cut(s) 13, 976, 1370, 1596, 1706
BstV2I GAAGAC 2 cut(s) 749, 762
BstX2I RGATCY 3 cut(s) 161, 208, 1539
BstYI RGATCY 3 cut(s) 161, 208, 1539
BsuRI GGCC 4 cut(s) 44, 291, 683, 1516
BtsCI GGATG 3 cut(s) 607, 1057, 1779
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 5 cut(s) 21, 663, 1026, 1164, 1313
BveI ACCTGC 1 cut(s) 1441
Cac8I GCNNGC 5 cut(s) 239, 402, 859, 1518, 1582
Cfr10I RCCGGY 1 cut(s) 320
Cfr13I GGNCC 2 cut(s) 541, 1514
CseI GACGC 1 cut(s) 1911
Csp6I GTAC 3 cut(s) 194, 499, 1327
CspAI ACCGGT 1 cut(s) 320
CviAII CATG 8 cut(s) 46, 220, 278, 628, 731, 804, 1106, 1714
CviQI GTAC 3 cut(s) 194, 499, 1327
DrdI GACNNNNNNGTC 1 cut(s) 1010
DseDI GACNNNNNNGTC 1 cut(s) 1010
EaeI YGGCCR 2 cut(s) 42, 289
Eco130I CCWWGG 2 cut(s) 165, 1507
Eco32I GATATC 1 cut(s) 571
Eco47I GGWCC 1 cut(s) 541
Eco57I CTGAAG 2 cut(s) 20, 465
Eco88I CYCGRG 1 cut(s) 70
EcoO109I RGGNCCY 1 cut(s) 541
EcoRII CCWGG 6 cut(s) 867, 895, 931, 994, 1335, 1412
EcoRV GATATC 1 cut(s) 571
EcoT14I CCWWGG 2 cut(s) 165, 1507
EcoT22I ATGCAT 1 cut(s) 1311
ErhI CCWWGG 2 cut(s) 165, 1507
FaeI CATG 8 cut(s) 49, 223, 281, 631, 734, 807, 1109, 1717
FalI AAGNNNNNCTT 2 cut(s) 782, 814
FaqI GGGAC 2 cut(s) 1649, 1897
FatI CATG 8 cut(s) 45, 219, 277, 627, 730, 803, 1105, 1713
FauI CCCGC 1 cut(s) 1645
FbaI TGATCA 2 cut(s) 3, 346
Fnu4HI GCNGC 5 cut(s) 27, 990, 1359, 1585, 1720
FokI GGATG 3 cut(s) 614, 1044, 1766
Fsp4HI GCNGC 5 cut(s) 27, 990, 1359, 1585, 1720
FspBI CTAG 3 cut(s) 815, 1118, 1899
GluI GCNGC 5 cut(s) 27, 990, 1359, 1585, 1720
GsuI CTGGAG 3 cut(s) 189, 1319, 1756
HaeIII GGCC 4 cut(s) 44, 291, 683, 1516
HapII CCGG 1 cut(s) 321
HgaI GACGC 1 cut(s) 1911
Hin1II CATG 8 cut(s) 49, 223, 281, 631, 734, 807, 1109, 1717
HincII GTYRAC 1 cut(s) 1231
HindII GTYRAC 1 cut(s) 1231
HindIII AAGCTT 2 cut(s) 32, 1446
HinfI GANTC 4 cut(s) 435, 758, 1044, 1888
HpaI GTTAAC 1 cut(s) 1231
HpaII CCGG 1 cut(s) 321
HphI GGTGA 3 cut(s) 1583, 1828, 1864
Hpy166II GTNNAC 4 cut(s) 64, 326, 1231, 1487
Hpy188I TCNGA 9 cut(s) 39, 81, 190, 417, 690, 763, 1220, 1344, 1349
Hpy188III TCNNGA 9 cut(s) 206, 344, 362, 443, 470, 584, 1735, 1783, 1914
Hpy8I GTNNAC 4 cut(s) 64, 326, 1231, 1487
Hpy99I CGWCG 1 cut(s) 552
HpyAV CCTTC 5 cut(s) 76, 130, 554, 769, 1272
HpyCH4III ACNGT 6 cut(s) 1080, 1168, 1397, 1462, 1481, 1911
HpyCH4IV ACGT 1 cut(s) 461
HpyF10VI GCNNNNNNNGC 6 cut(s) 288, 397, 595, 725, 998, 1902
HpySE526I ACGT 1 cut(s) 461
Hsp92II CATG 8 cut(s) 49, 223, 281, 631, 734, 807, 1109, 1717
Ksp22I TGATCA 2 cut(s) 3, 346
KspAI GTTAAC 1 cut(s) 1231
LmnI GCTCC 5 cut(s) 208, 381, 1338, 1418, 1934
Lsp1109I GCAGC 5 cut(s) 13, 976, 1370, 1596, 1706
LweI GCATC 4 cut(s) 592, 966, 1296, 1567
MaeI CTAG 3 cut(s) 815, 1118, 1899
MaeII ACGT 1 cut(s) 461
MaeIII GTNAC 4 cut(s) 52, 427, 1838, 1870
MboII GAAGA 9 cut(s) 377, 380, 754, 767, 1082, 1135, 1141, 1699, 1831
MfeI CAATTG 1 cut(s) 723
MflI RGATCY 3 cut(s) 161, 208, 1539
MlsI TGGCCA 2 cut(s) 44, 291
MluNI TGGCCA 2 cut(s) 44, 291
MlyI GAGTC 4 cut(s) 429, 752, 1053, 1882
MmeI TCCRAC 3 cut(s) 456, 1225, 1453
Mox20I TGGCCA 2 cut(s) 44, 291
Mph1103I ATGCAT 1 cut(s) 1311
MscI TGGCCA 2 cut(s) 44, 291
MseI TTAA 9 cut(s) 117, 216, 354, 387, 981, 1170, 1230, 1299, 1794
MslI CAYNNNNRTG 2 cut(s) 50, 1784
Msp20I TGGCCA 2 cut(s) 44, 291
MspA1I CMGCKG 1 cut(s) 1520
MspI CCGG 1 cut(s) 321
MspR9I CCNGG 6 cut(s) 869, 897, 933, 996, 1337, 1414
MunI CAATTG 1 cut(s) 723
Mva1269I GAATGC 3 cut(s) 841, 1309, 1679
MvaI CCWGG 6 cut(s) 869, 897, 933, 996, 1337, 1414
MwoI GCNNNNNNNGC 6 cut(s) 288, 397, 595, 725, 998, 1902
NlaIII CATG 8 cut(s) 49, 223, 281, 631, 734, 807, 1109, 1717
NlaIV GGNNCC 6 cut(s) 480, 493, 519, 542, 1376, 1936
NmuCI GTSAC 3 cut(s) 52, 1838, 1870
NsiI ATGCAT 1 cut(s) 1311
NspI RCATGY 2 cut(s) 734, 1109
PasI CCCWGGG 1 cut(s) 932
PciI ACATGT 1 cut(s) 1105
PcsI WCGNNNNNNNCGW 1 cut(s) 77
PctI GAATGC 3 cut(s) 841, 1309, 1679
PfoI TCCNGGA 1 cut(s) 867
PinAI ACCGGT 1 cut(s) 320
PkrI GCNGC 5 cut(s) 28, 991, 1360, 1586, 1721
PleI GAGTC 4 cut(s) 429, 752, 1052, 1882
PpsI GAGTC 4 cut(s) 429, 752, 1052, 1882
Ppu21I YACGTR 1 cut(s) 462
PpuMI RGGWCCY 1 cut(s) 541
PscI ACATGT 1 cut(s) 1105
Psp5II RGGWCCY 1 cut(s) 541
Psp6I CCWGG 6 cut(s) 867, 895, 931, 994, 1335, 1412
PspGI CCWGG 6 cut(s) 867, 895, 931, 994, 1335, 1412
PspN4I GGNNCC 6 cut(s) 480, 493, 519, 542, 1376, 1936
PspPI GGNCC 2 cut(s) 541, 1514
PspPPI RGGWCCY 1 cut(s) 541
PsuI RGATCY 3 cut(s) 161, 208, 1539
PvuII CAGCTG 1 cut(s) 1520
RsaI GTAC 3 cut(s) 195, 500, 1328
RsaNI GTAC 3 cut(s) 194, 499, 1327
RseI CAYNNNNRTG 2 cut(s) 50, 1784
SaqAI TTAA 9 cut(s) 117, 216, 354, 387, 981, 1170, 1230, 1299, 1794
SatI GCNGC 5 cut(s) 27, 990, 1359, 1585, 1720
Sau96I GGNCC 2 cut(s) 541, 1514
ScaI AGTACT 2 cut(s) 195, 500
SchI GAGTC 4 cut(s) 429, 752, 1053, 1882
ScrFI CCNGG 6 cut(s) 869, 897, 933, 996, 1337, 1414
SfaNI GCATC 4 cut(s) 592, 966, 1296, 1567
SfcI CTRYAG 1 cut(s) 606
SgrAI CRCCGGYG 1 cut(s) 320
SinI GGWCC 1 cut(s) 541
SmiMI CAYNNNNRTG 2 cut(s) 50, 1784
SmlI CTYRAG 1 cut(s) 584
SmoI CTYRAG 1 cut(s) 584
SsiI CCGC 4 cut(s) 918, 1378, 1406, 1652
SspI AATATT 1 cut(s) 267
SspMI CTAG 3 cut(s) 815, 1118, 1899
StyD4I CCNGG 6 cut(s) 867, 895, 931, 994, 1335, 1412
StyI CCWWGG 2 cut(s) 165, 1507
TaaI ACNGT 6 cut(s) 1080, 1168, 1397, 1462, 1481, 1911
TaiI ACGT 1 cut(s) 464
TaqI TCGA 2 cut(s) 621, 969
TatI WGTACW 2 cut(s) 193, 498
Tru1I TTAA 9 cut(s) 117, 216, 354, 387, 981, 1170, 1230, 1299, 1794
Tru9I TTAA 9 cut(s) 117, 216, 354, 387, 981, 1170, 1230, 1299, 1794
TscAI CASTG 5 cut(s) 28, 670, 1033, 1171, 1320
TseFI GTSAC 3 cut(s) 52, 1838, 1870
TseI GCWGC 5 cut(s) 26, 989, 1358, 1584, 1719
Tsp45I GTSAC 3 cut(s) 52, 1838, 1870
TspDTI ATGAA 8 cut(s) 768, 848, 921, 1046, 1116, 1458, 1490, 1686
TspRI CASTG 5 cut(s) 28, 670, 1033, 1171, 1320
VpaK11BI GGWCC 1 cut(s) 541
XapI RAATTY 4 cut(s) 100, 673, 977, 1810
XceI RCATGY 2 cut(s) 734, 1109
XspI CTAG 3 cut(s) 815, 1118, 1899
ZrmI AGTACT 2 cut(s) 195, 500
Zsp2I ATGCAT 1 cut(s) 1311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.