Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0004012

Physical Location & Seq

Genomic Coordinates Forward (+)

22461797 .. 22465691

Gene Structure 3895 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0240200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGAGGCGTCTCTAACCTCGGAAAAAATCTTGACCATTGAGTATGTCAGAGAGACCCTCATTCCCAGACTCATCGAGCATCTCAACAAAGCCAAGGGTACGCTAGCCAAGGGTTACCTTTCCGATAACCACGCCGACAAGGATGAGAGAGACAAACTTACCACTGAAATGGAAAAGCTACGCAAAGACCTCATTTTTATCAAGCAAGTTTTCACCGGATTGGACACTTTTGAAAAAAGCACAAGTGATCTTTTCAAGGTTCTCCAGCAACCAGAACACAGCCTGGAGCAGCTTTTGGAGCCTCCTGCAGGAACGCAGACCGGCTTCCACGAGCCGCTTGCAAAGCAATTTAAGCCCAAGCTTGGAGTGCTTGGTGAGGTTATCATCAAACTGAAGCTGCTACTTCCATCACCGCACAAACTGTTGTTGGACAGGTCCAGTACTTTTCAACTGTCCAGCATTCATTCGGGTGGAGACGAGCATCTCAATCGATTGCTTGGCTTACACTCAAGTGAGGTGTTCTATAAAAGCCAGGCTTTTAAAGACTTTCATGATGTTTATAACAGTCTTGGTGTTACTGCAAAGCTCTGCTTGCTGAGTTTCTCGGTGTTTCCGGCGAATGAGGTTCTAAAGAAGAGGCGTTTGGTACATTGGTGGGTTGGAGAAGAGATCCTCTACCCTCCAGTTGATGGTGAAAAGACGGTGGAGGAAATTGCTGATGGAATATTTGAAGACTTAACAGTGAAGGGCTGCATTGAACCGGTCAAGAAGAAGCGGAGATCAGACGTGCAGAGTTTTAAAATGCACCCTCTAATTCGTTCAGCGGTGATTCGGATTGCCAAAGACGTTGAGTTCTTAGATTTTGATGACAAAGGGAGACCAACTACTGAATTTTCAAGGTCTTATCGCGCGTGTTTGGTAAGTGGTTTTCAACTGAAATTGGCAAATAAAAAAGAGGAGGAATTAGAAAAACTGCAGACTGTATTCAATGTGAACGATTCTTATCCGAATTTTTCCCAAGTGGAATGGTCCAAGTTGAAGAATGTGAAGGTTCTTTATCTTGGAAGGTGGCACAGCAGGGCTAAACATCACATTGAACTAGTTGACAGCAATTTCTTGGAAGGGTTGAAATTTATGACACGTTTGAGGTTTCTCAGCCTTCGAGGAATATCGGGGATCATGGAGCTGCCTGATTCATTATGCAAGCTTGTTTGTTTGAAGATCTTGGATCTTGGAGCATGTCACAGTCTAGAGGTGCTTCCGAAAAAAATAAGCTTGCTTAAGAAGCTCACACACTTGGATATGTCCGAGTGTTACTTGCTGGATCGTATGCCTAAGGGGATCAGATCGCTCTCAGAACTCGAAGTTCTTAAGGGGTTCATAATTGGTGATCACAAGGAGAACACTTCATGTACTCTGCATGATTTGTCAGGATTGCAAAAGTTGAAAAAATTGACAATGAACACAAGCAGGGAGGATTTTCCCAACGAAGAAGAGCTAACCGTTTTACAAGGATTTGGTTCGCTTCAAAAGCTAACAATAGCATGGGGAGGAGTAGAATTTCTTGCCAACCGCCAAAATAAGGATAGGAAGCAGGACAATGTTGGAGCACAACCAAAAACAGCAAGCACAACGGATGCCAGTGGAGGTAACAGAAATGAAGATGATGCTAATGGCATTCAAAATCATGTGCCAAAAACCCCGGCAAGGTCATTAACCTTCAAGCGAAGGGCTATATTGGCTCCGAGGATTCGGGAACATTTTGAAGCACTTGAGAAACTGGACTTGCAATGCTACCCTCATATGAAAGCACCGACTTGGTTGACTCCCGGAATGCTCAAGAAGCTGGAAAAACTCTACATTAGAGGGGGACAGCTCCAAAGTCTAGGTCAAGTTCAGGAGAGTGACAAGTGGACAGTTGAGATATTGCGTTTGAAGTTCTTGAGTGAACTAAAGATGGATTGGAATGACCTCCAGTCAGCATTTCCAAAATTGAATTATGTGGAGAAATTTAGATGCCCTAAGACCACTTTCTTCCCATGCGATGAGACTGGAGTCTGGCTGAAGCCCGGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0008150 GO:0008194 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0030312 GO:0033036 GO:0033037 GO:0035251 GO:0044464 GO:0046527 GO:0051179 GO:0052545 GO:0071944 GO:0080165

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

692

Amino Acids

79.04

Weight (kDa)

8.86

Isoelectric Point (pI)

47.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_DRP	PF23559	203 - 273	1.6e-09	Disease resistance protein Winged helix domain
LRR_14	PF23598	342 - 515	1.2e-19	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004012)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37180 AT5G37180 AT5G37180
fragaria_vesca	FvH4_1g27400 FvH4_1g27400 FvH4_1g27400 FvH4_1g27400 FvH4_1g27400 FvH4_1g27400
malus_domestica	MD09G1280200.v1.1 MD17G1286900.v1.1 MD17G1287000.v1.1
prunus_persica	Prupe.3G014100_v2.0.a1 Prupe.3G014100_v2.0.a1 Prupe.3G014100_v2.0.a1
pyrus_communis	pycom09g18830 pycom17g27030 pycom17g27040
rosa_chinensis	RchiOBHm_Chr3g0488651
rosa_laevigata	RLG00000022933
rosa_multiflora	Rmu_sc0005363.1_g000051
rosa_roxburghii	Rroxscaffold_6G00393980
rosa_rugosa	Rorug03G0240100 Rorug03G0240100 Rorug03G0240200 Rorug03G0240200 Rorug03G0240200 Rorug03G0240200
rosa_samantha	Rh3AG288800 Rh3BG325400 Rh3CG323100 Rh3DG321800
rosa_wichuraiana	Rw3G025570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	561
AccB7I	CCANNNNNTGG	1 cut(s)	689
AccII	CGCG	2 cut(s)	909, 911
AciI	CCGC	5 cut(s)	335, 413, 775, 824, 1573
AclWI	GGATC	5 cut(s)	664, 1184, 1236, 1332, 1349
AcsI	RAATTY	5 cut(s)	890, 1009, 1130, 1559, 2009
AcuI	CTGAAG	1 cut(s)	413
AcyI	GRCGYC	1 cut(s)	8
AfaI	GTAC	4 cut(s)	100, 442, 648, 1414
AfiI	CCNNNNNNNGG	5 cut(s)	308, 362, 689, 1582, 1707
AflII	CTTAAG	2 cut(s)	1280, 1370
AflIII	ACRYGT	1 cut(s)	1139
AgeI	ACCGGT	1 cut(s)	760
AhdI	GACNNNNNGTC	1 cut(s)	1975
AhlI	ACTAGT	1 cut(s)	1099
AjiI	CACGTC	1 cut(s)	787
AjnI	CCWGG	2 cut(s)	282, 531
AjuI	GAANNNNNNNTTGG	2 cut(s)	626, 658
AleI	CACNNNNGTG	1 cut(s)	510
Alw21I	GWGCWC	1 cut(s)	1612
Alw26I	GTCTC	6 cut(s)	15, 47, 144, 468, 871, 2042
AlwI	GGATC	5 cut(s)	664, 1184, 1236, 1332, 1349
ApeKI	GCWGC	4 cut(s)	289, 397, 750, 1186
ApoI	RAATTY	5 cut(s)	890, 1009, 1130, 1559, 2009
ArsI	GACNNNNNNTTYG	2 cut(s)	1873, 1905
AsiGI	ACCGGT	1 cut(s)	760
AspLEI	GCGC	1 cut(s)	911
AspS9I	GGNCC	2 cut(s)	435, 1029
AsuC2I	CCSGG	3 cut(s)	1703, 1830, 2070
AsuHPI	GGTGA	6 cut(s)	205, 386, 402, 704, 838, 1400
AsuNHI	GCTAGC	1 cut(s)	103
AvaII	GGWCC	2 cut(s)	435, 1029
AxyI	CCTNAGG	1 cut(s)	1335
BaeI	ACNNNNGTAYC	2 cut(s)	638, 671
BauI	CACGAG	1 cut(s)	329
BbsI	GAAGAC	1 cut(s)	738
Bbv12I	GWGCWC	1 cut(s)	1612
BbvI	GCAGC	4 cut(s)	301, 384, 737, 1173
BccI	CCATC	4 cut(s)	415, 683, 713, 1951
BcgI	CGANNNNNNTGC	4 cut(s)	320, 354, 470, 504
BciT130I	CCWGG	2 cut(s)	284, 533
BclI	TGATCA	1 cut(s)	1390
BcnI	CCSGG	3 cut(s)	1703, 1830, 2070
BcoDI	GTCTC	6 cut(s)	15, 47, 144, 468, 871, 2042
BcuI	ACTAGT	1 cut(s)	1099
BfaI	CTAG	4 cut(s)	104, 1100, 1250, 1886
BfmI	CTRYAG	2 cut(s)	306, 974
BfrI	CTTAAG	2 cut(s)	1280, 1370
BglII	AGATCT	1 cut(s)	1221
BisI	GCNGC	5 cut(s)	290, 335, 398, 751, 1187
BlsI	GCNGC	5 cut(s)	291, 336, 399, 752, 1188
BmcAI	AGTACT	1 cut(s)	442
Bme1390I	CCNGG	5 cut(s)	284, 533, 1703, 1830, 2070
Bme18I	GGWCC	2 cut(s)	435, 1029
BmeRI	GACNNNNNGTC	1 cut(s)	1975
BmgBI	CACGTC	1 cut(s)	787
BmgT120I	GGNCC	2 cut(s)	435, 1029
BmiI	GGNNCC	2 cut(s)	300, 1743
BmrFI	CCNGG	5 cut(s)	284, 533, 1703, 1830, 2070
BmsI	GCATC	5 cut(s)	88, 490, 1627, 1657, 2006
BmtI	GCTAGC	1 cut(s)	107
BoxI	GACNNNNGTC	1 cut(s)	2054
BpiI	GAAGAC	1 cut(s)	738
BplI	GAGNNNNNCTC	2 cut(s)	42, 74
BpmI	CTGGAG	5 cut(s)	248, 305, 666, 1958, 2073
BpuEI	CTTGAG	4 cut(s)	493, 1793, 1823, 1963
BpuMI	CCSGG	3 cut(s)	1703, 1830, 2070
Bsa29I	ATCGAT	1 cut(s)	490
BsaBI	GATNNNNATC	1 cut(s)	1002
BsaHI	GRCGYC	1 cut(s)	8
BsaI	GGTCTC	2 cut(s)	47, 871
BsaJI	CCNNGG	5 cut(s)	18, 93, 108, 1701, 1745
BsaWI	WCCGGW	2 cut(s)	215, 760
Bsc4I	CCNNNNNNNGG	5 cut(s)	308, 362, 689, 1582, 1707
Bse118I	RCCGGY	2 cut(s)	320, 760
Bse1I	ACTGG	6 cut(s)	438, 683, 1641, 1785, 1975, 2056
Bse21I	CCTNAGG	1 cut(s)	1335
Bse3DI	GCAATG	1 cut(s)	1796
Bse8I	GATNNNNATC	1 cut(s)	1002
BseBI	CCWGG	2 cut(s)	284, 533
BseCI	ATCGAT	1 cut(s)	490
BseDI	CCNNGG	5 cut(s)	18, 93, 108, 1701, 1745
BseGI	GGATG	2 cut(s)	148, 1642
BseJI	GATNNNNATC	1 cut(s)	1002
BseLI	CCNNNNNNNGG	5 cut(s)	308, 362, 689, 1582, 1707
BseMI	GCAATG	1 cut(s)	1796
BseMII	CTCAG	3 cut(s)	587, 1168, 1368
BseNI	ACTGG	6 cut(s)	438, 683, 1641, 1785, 1975, 2056
BseRI	GAGGAG	2 cut(s)	971, 1566
BseXI	GCAGC	4 cut(s)	301, 384, 737, 1173
BsgI	GTGCAG	1 cut(s)	809
Bsh1236I	CGCG	2 cut(s)	909, 911
BshTI	ACCGGT	1 cut(s)	760
BshVI	ATCGAT	1 cut(s)	490
BsiHKAI	GWGCWC	1 cut(s)	1612
BsiSI	CCGG	7 cut(s)	216, 321, 614, 761, 1703, 1830, 2070
BslFI	GGGAC	1 cut(s)	1884
BslI	CCNNNNNNNGG	5 cut(s)	308, 362, 689, 1582, 1707
BsmAI	GTCTC	6 cut(s)	15, 47, 144, 468, 871, 2042
BsmBI	CGTCTC	2 cut(s)	15, 468
BsmFI	GGGAC	1 cut(s)	1884
BsmI	GAATGC	3 cut(s)	459, 1677, 1839
Bso31I	GGTCTC	2 cut(s)	47, 871
Bsp1286I	GDGCHC	1 cut(s)	1612
BspACI	CCGC	5 cut(s)	335, 413, 775, 824, 1573
BspCNI	CTCAG	3 cut(s)	588, 1167, 1367
BspDI	ATCGAT	1 cut(s)	490
BspFNI	CGCG	2 cut(s)	909, 911
BspHI	TCATGA	1 cut(s)	550
BspLI	GGNNCC	2 cut(s)	300, 1743
BspMAI	CTGCAG	2 cut(s)	310, 978
BspOI	GCTAGC	1 cut(s)	107
BspPI	GGATC	5 cut(s)	664, 1184, 1236, 1332, 1349
BspQI	GCTCTTC	1 cut(s)	1488
BspTI	CTTAAG	2 cut(s)	1280, 1370
BspTNI	GGTCTC	2 cut(s)	47, 871
BsrDI	GCAATG	1 cut(s)	1796
BsrFI	RCCGGY	2 cut(s)	320, 760
BsrI	ACTGG	6 cut(s)	438, 683, 1641, 1785, 1975, 2056
BssAI	RCCGGY	2 cut(s)	320, 760
BssECI	CCNNGG	5 cut(s)	18, 93, 108, 1701, 1745
BssNI	GRCGYC	1 cut(s)	8
BssSI	CACGAG	1 cut(s)	329
BssT1I	CCWWGG	2 cut(s)	93, 108
Bst2BI	CACGAG	1 cut(s)	329
Bst2UI	CCWGG	2 cut(s)	284, 533
Bst4CI	ACNGT	9 cut(s)	423, 453, 566, 703, 742, 982, 1247, 1504, 1918
Bst6I	CTCTTC	3 cut(s)	629, 660, 1488
BstACI	GRCGYC	1 cut(s)	8
BstAFI	CTTAAG	2 cut(s)	1280, 1370
BstC8I	GCNNGC	6 cut(s)	105, 339, 593, 1205, 1277, 1627
BstDEI	CTNAG	6 cut(s)	596, 856, 1154, 1335, 1354, 2022
BstEII	GGTNACC	1 cut(s)	113
BstENI	CCTNNNNNAGG	1 cut(s)	306
BstF5I	GGATG	2 cut(s)	148, 1642
BstFNI	CGCG	2 cut(s)	909, 911
BstHHI	GCGC	1 cut(s)	911
BstMAI	GTCTC	6 cut(s)	15, 47, 144, 468, 871, 2042
BstMWI	GCNNNNNNNGC	9 cut(s)	298, 343, 352, 367, 592, 1285, 1531, 1739, 1843
BstNI	CCWGG	2 cut(s)	284, 533
BstNSI	RCATGY	1 cut(s)	1242
BstPAI	GACNNNNGTC	1 cut(s)	2054
BstPI	GGTNACC	1 cut(s)	113
BstSCI	CCNGG	5 cut(s)	282, 531, 1701, 1828, 2068
BstSFI	CTRYAG	2 cut(s)	306, 974
BstUI	CGCG	2 cut(s)	909, 911
BstV1I	GCAGC	4 cut(s)	301, 384, 737, 1173
BstV2I	GAAGAC	1 cut(s)	738
BstX2I	RGATCY	3 cut(s)	669, 1221, 1228
BstXI	CCANNNNNNTGG	1 cut(s)	169
BstYI	RGATCY	3 cut(s)	669, 1221, 1228
Bsu15I	ATCGAT	1 cut(s)	490
Bsu36I	CCTNAGG	1 cut(s)	1335
BsuTUI	ATCGAT	1 cut(s)	490
BtgZI	GCGATG	1 cut(s)	2058
BtrI	CACGTC	1 cut(s)	787
BtsCI	GGATG	2 cut(s)	148, 1642
BtsIMutI	CAGTG	3 cut(s)	162, 747, 1648
Cac8I	GCNNGC	6 cut(s)	105, 339, 593, 1205, 1277, 1627
CciI	TCATGA	1 cut(s)	550
CfoI	GCGC	1 cut(s)	911
Cfr10I	RCCGGY	2 cut(s)	320, 760
Cfr13I	GGNCC	2 cut(s)	435, 1029
ClaI	ATCGAT	1 cut(s)	490
Csp6I	GTAC	4 cut(s)	99, 441, 647, 1413
CspAI	ACCGGT	1 cut(s)	760
CviAII	CATG	8 cut(s)	551, 1180, 1239, 1410, 1421, 1545, 1688, 2040
CviQI	GTAC	4 cut(s)	99, 441, 647, 1413
DdeI	CTNAG	6 cut(s)	596, 856, 1154, 1335, 1354, 2022
DraI	TTTAAA	2 cut(s)	541, 799
DriI	GACNNNNNGTC	1 cut(s)	1975
Eam1104I	CTCTTC	3 cut(s)	629, 660, 1488
Eam1105I	GACNNNNNGTC	1 cut(s)	1975
EarI	CTCTTC	3 cut(s)	629, 660, 1488
Eco130I	CCWWGG	2 cut(s)	93, 108
Eco31I	GGTCTC	2 cut(s)	47, 871
Eco47I	GGWCC	2 cut(s)	435, 1029
Eco57I	CTGAAG	1 cut(s)	413
Eco81I	CCTNAGG	1 cut(s)	1335
Eco91I	GGTNACC	1 cut(s)	113
EcoNI	CCTNNNNNAGG	1 cut(s)	306
EcoO65I	GGTNACC	1 cut(s)	113
EcoRII	CCWGG	2 cut(s)	282, 531
EcoT14I	CCWWGG	2 cut(s)	93, 108
ErhI	CCWWGG	2 cut(s)	93, 108
Esp3I	CGTCTC	2 cut(s)	15, 468
FaeI	CATG	8 cut(s)	554, 1183, 1242, 1413, 1424, 1548, 1691, 2043
FalI	AAGNNNNNCTT	4 cut(s)	520, 552, 575, 607
FaqI	GGGAC	1 cut(s)	1884
FatI	CATG	8 cut(s)	550, 1179, 1238, 1409, 1420, 1544, 1687, 2039
FauNDI	CATATG	1 cut(s)	1803
FbaI	TGATCA	1 cut(s)	1390
Fnu4HI	GCNGC	5 cut(s)	290, 335, 398, 751, 1187
FokI	GGATG	2 cut(s)	155, 1649
Fsp4HI	GCNGC	5 cut(s)	290, 335, 398, 751, 1187
FspBI	CTAG	4 cut(s)	104, 1100, 1250, 1886
GlaI	GCGC	1 cut(s)	910
GluI	GCNGC	5 cut(s)	290, 335, 398, 751, 1187
GsuI	CTGGAG	5 cut(s)	248, 305, 666, 1958, 2073
HapII	CCGG	7 cut(s)	216, 321, 614, 761, 1703, 1830, 2070
HhaI	GCGC	1 cut(s)	911
Hin1I	GRCGYC	1 cut(s)	8
Hin1II	CATG	8 cut(s)	554, 1183, 1242, 1413, 1424, 1548, 1691, 2043
Hin6I	GCGC	1 cut(s)	909
HinP1I	GCGC	1 cut(s)	909
HincII	GTYRAC	2 cut(s)	1105, 1824
HindII	GTYRAC	2 cut(s)	1105, 1824
HindIII	AAGCTT	3 cut(s)	359, 1205, 1273
HinfI	GANTC	7 cut(s)	69, 829, 998, 1193, 1750, 1825, 2055
HpaII	CCGG	7 cut(s)	216, 321, 614, 761, 1703, 1830, 2070
HphI	GGTGA	6 cut(s)	205, 386, 402, 704, 838, 1400
Hpy166II	GTNNAC	5 cut(s)	994, 1105, 1824, 1914, 1949
Hpy188III	TCNNGA	9 cut(s)	31, 551, 766, 1250, 1431, 1754, 1840, 1898, 1942
Hpy8I	GTNNAC	5 cut(s)	994, 1105, 1824, 1914, 1949
HpyAV	CCTTC	7 cut(s)	739, 1042, 1059, 1115, 1169, 1722, 1729
HpyCH4III	ACNGT	9 cut(s)	423, 453, 566, 703, 742, 982, 1247, 1504, 1918
HpyCH4IV	ACGT	3 cut(s)	786, 846, 1141
HpyF10VI	GCNNNNNNNGC	9 cut(s)	298, 343, 352, 367, 592, 1285, 1531, 1739, 1843
HpyF3I	CTNAG	6 cut(s)	596, 856, 1154, 1335, 1354, 2022
HpySE526I	ACGT	3 cut(s)	786, 846, 1141
Hsp92I	GRCGYC	1 cut(s)	8
Hsp92II	CATG	8 cut(s)	554, 1183, 1242, 1413, 1424, 1548, 1691, 2043
HspAI	GCGC	1 cut(s)	909
Ksp22I	TGATCA	1 cut(s)	1390
LguI	GCTCTTC	1 cut(s)	1488
LmnI	GCTCC	7 cut(s)	286, 298, 1183, 1235, 1607, 1747, 1881
Lsp1109I	GCAGC	4 cut(s)	301, 384, 737, 1173
LweI	GCATC	5 cut(s)	88, 490, 1627, 1657, 2006
MaeI	CTAG	4 cut(s)	104, 1100, 1250, 1886
MaeII	ACGT	3 cut(s)	786, 846, 1141
MaeIII	GTNAC	6 cut(s)	113, 574, 1241, 1313, 1649, 1904
MflI	RGATCY	3 cut(s)	669, 1221, 1228
MhlI	GDGCHC	1 cut(s)	1612
MlyI	GAGTC	3 cut(s)	63, 1819, 2064
MmeI	TCCRAC	3 cut(s)	408, 640, 1585
MseI	TTAA	7 cut(s)	351, 540, 737, 798, 1281, 1371, 1715
MslI	CAYNNNNRTG	3 cut(s)	167, 468, 510
MspA1I	CMGCKG	1 cut(s)	824
MspCI	CTTAAG	2 cut(s)	1280, 1370
MspI	CCGG	7 cut(s)	216, 321, 614, 761, 1703, 1830, 2070
MspR9I	CCNGG	5 cut(s)	284, 533, 1703, 1830, 2070
Mva1269I	GAATGC	3 cut(s)	459, 1677, 1839
MvaI	CCWGG	2 cut(s)	284, 533
MvnI	CGCG	2 cut(s)	909, 911
MwoI	GCNNNNNNNGC	9 cut(s)	298, 343, 352, 367, 592, 1285, 1531, 1739, 1843
NciI	CCSGG	3 cut(s)	1703, 1830, 2070
NdeI	CATATG	1 cut(s)	1803
NheI	GCTAGC	1 cut(s)	103
NlaIII	CATG	8 cut(s)	554, 1183, 1242, 1413, 1424, 1548, 1691, 2043
NlaIV	GGNNCC	2 cut(s)	300, 1743
NmuCI	GTSAC	2 cut(s)	1241, 1904
NspI	RCATGY	1 cut(s)	1242
OliI	CACNNNNGTG	1 cut(s)	510
PagI	TCATGA	1 cut(s)	550
PciSI	GCTCTTC	1 cut(s)	1488
PctI	GAATGC	3 cut(s)	459, 1677, 1839
PfeI	GAWTC	4 cut(s)	829, 998, 1193, 1750
PflMI	CCANNNNNTGG	1 cut(s)	689
PfoI	TCCNGGA	1 cut(s)	1828
PinAI	ACCGGT	1 cut(s)	760
PkrI	GCNGC	5 cut(s)	291, 336, 399, 752, 1188
PleI	GAGTC	3 cut(s)	63, 1819, 2063
PpsI	GAGTC	3 cut(s)	63, 1819, 2063
PshAI	GACNNNNGTC	1 cut(s)	2054
PsiI	TTATAA	1 cut(s)	561
Psp6I	CCWGG	2 cut(s)	282, 531
PspEI	GGTNACC	1 cut(s)	113
PspGI	CCWGG	2 cut(s)	282, 531
PspN4I	GGNNCC	2 cut(s)	300, 1743
PspPI	GGNCC	2 cut(s)	435, 1029
PstI	CTGCAG	2 cut(s)	310, 978
PsuI	RGATCY	3 cut(s)	669, 1221, 1228
RsaI	GTAC	4 cut(s)	100, 442, 648, 1414
RsaNI	GTAC	4 cut(s)	99, 441, 647, 1413
RseI	CAYNNNNRTG	3 cut(s)	167, 468, 510
SapI	GCTCTTC	1 cut(s)	1488
SaqAI	TTAA	7 cut(s)	351, 540, 737, 798, 1281, 1371, 1715
SatI	GCNGC	5 cut(s)	290, 335, 398, 751, 1187
Sau96I	GGNCC	2 cut(s)	435, 1029
SbfI	CCTGCAGG	1 cut(s)	310
ScaI	AGTACT	1 cut(s)	442
SchI	GAGTC	3 cut(s)	63, 1819, 2064
ScrFI	CCNGG	5 cut(s)	284, 533, 1703, 1830, 2070
SdaI	CCTGCAGG	1 cut(s)	310
SduI	GDGCHC	1 cut(s)	1612
SfaNI	GCATC	5 cut(s)	88, 490, 1627, 1657, 2006
SfcI	CTRYAG	2 cut(s)	306, 974
SinI	GGWCC	2 cut(s)	435, 1029
SmiMI	CAYNNNNRTG	3 cut(s)	167, 468, 510
SmlI	CTYRAG	6 cut(s)	508, 1280, 1370, 1772, 1838, 1942
SmoI	CTYRAG	6 cut(s)	508, 1280, 1370, 1772, 1838, 1942
SpeI	ACTAGT	1 cut(s)	1099
Sse8387I	CCTGCAGG	1 cut(s)	310
SsiI	CCGC	5 cut(s)	335, 413, 775, 824, 1573
SspI	AATATT	1 cut(s)	726
SspMI	CTAG	4 cut(s)	104, 1100, 1250, 1886
StyD4I	CCNGG	5 cut(s)	282, 531, 1701, 1828, 2068
StyI	CCWWGG	2 cut(s)	93, 108
TaaI	ACNGT	9 cut(s)	423, 453, 566, 703, 742, 982, 1247, 1504, 1918
TaiI	ACGT	3 cut(s)	789, 849, 1144
TaqI	TCGA	4 cut(s)	75, 490, 1162, 1362
TatI	WGTACW	2 cut(s)	440, 1412
TauI	GCSGC	1 cut(s)	337
TfiI	GAWTC	4 cut(s)	829, 998, 1193, 1750
Tru1I	TTAA	7 cut(s)	351, 540, 737, 798, 1281, 1371, 1715
Tru9I	TTAA	7 cut(s)	351, 540, 737, 798, 1281, 1371, 1715
TscAI	CASTG	3 cut(s)	169, 747, 1648
TseFI	GTSAC	2 cut(s)	1241, 1904
TseI	GCWGC	4 cut(s)	289, 397, 750, 1186
Tsp45I	GTSAC	2 cut(s)	1241, 1904
TspDTI	ATGAA	8 cut(s)	452, 539, 1185, 1369, 1398, 1475, 1674, 1820
TspGWI	ACGGA	1 cut(s)	1649
TspRI	CASTG	3 cut(s)	169, 747, 1648
Van91I	CCANNNNNTGG	1 cut(s)	689
Vha464I	CTTAAG	2 cut(s)	1280, 1370
VpaK11BI	GGWCC	2 cut(s)	435, 1029
XagI	CCTNNNNNAGG	1 cut(s)	306
XapI	RAATTY	5 cut(s)	890, 1009, 1130, 1559, 2009
XbaI	TCTAGA	1 cut(s)	1249
XceI	RCATGY	1 cut(s)	1242
XspI	CTAG	4 cut(s)	104, 1100, 1250, 1886
ZrmI	AGTACT	1 cut(s)	442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.