Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0004012

Physical Location & Seq

Genomic Coordinates Reverse (-)

34936326 .. 34943380

Gene Structure 7055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG321800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

ATGGATTCTGCAACTGCAGCCATGAAACGATCTGACTCCATAGCCGAAAGCATGCCCGACGCTCTAAGGCAGAGCCGGTACCATATGAAGAGGTGTTTTGCTAAGTTCATTGAAAAGGGAAAAAGGATAATGAAACTTCAGCATTTGATGAATGAAGTGGAGTTAGTCATAGATGACAAGGTTGAAATGAACCAAGTCTTGGCAGGAGTACTTGGCTATATATTGTGTTCAACTCAGGAAGCTGTTGTTAGTCCCCCACATGTTCTCTTTTCAATAAGACCAAACCCTGGATATTGGGAATTTGTTAAAGTCAGCTCTGAGGATCTCTCAGTTGAGGGCATCACTGTGAGGGACTACTTGAAATGCAAAGAAACACTTTATGATGAGAAATGGGCCAATGATGAAAATGCATTGGAGGTGGATTTTAGAGCAATTGACTACTCTACTCCTCACTTAACTCTATCGTCCTCGATTGGAAATGGACTCGACTATGTTTCCAAGTTCATGACTTCGATGCTAGCTGGGAGATTGGAGAATTCGCAGCCCCTTGTGGACTACTTACTTTCACTGAATTATCAAGGAGATAAACTTATGATCAATGACACCCTCAACACTGCTGCAAAGCTTCAGATGGCCATGATTGTGACAGAAGTTTACCTCTCGGGGCTTCCGAAGGACACTCCATTTCAAAATTTTGAACTTAGGTTTAAGGAGTGGGGCTTTGAGAAGGGTTGGGGAGACACAGCAGAGAGATCCAAGGAAACAATGAGAATACTATCAGAAGTACTACAAGCTCCAGATCCACTTAACATGGAGAGGTTTTTGAGCAGGCTTCCTACCATATTCAATGTTGTAATATTCTCTCCTCATGGCTATTTTGGCCAAGCTGATGTTCTTGGTTTGCCAGACACCGGTGGACAGGTTGTTTATATTCTTGATCAAGTTAAAGCTCTGGAAGAAGAATTGCTCCTTAGAATTAAGCATCAAGGGCTTGCTGTGAAGCCTCAGATTTTTGTGGTAACAAGACTCATTCCTGAAGCAAGGGGAACCACGTGCAATCAGGAGTTGGAACCTATCAATGGCACCAAGTACTCAAACATTCTAAGGGTTCCATTTAGGACAGAAAAGGGGGTCCTTCGTCGTTGGGTTTCTCGTTTTGATATCTACCCCTATCTTGAGCTGTTTGTGCAGGATGCTACAGCCAAAATCCTCGACCTCATAGATGGGAAGCCTGATCTTATTATTGGAAATTACACTGATGGGAATTTGGTGGCCTCTCTGATGGCTAACAAACTTGGAATAACTCAGGCAACAATTGCACATGCTTTGGAGAAGACCAAGTATGAAGACTCAGACATCAAGTGGAAGGAATTAGACCCTAAGTATCACTTCTCATGCCAATTTCTAGCAGACACAATTTCAATGAATGCAACAGATTTTGTCATTGCAAGCACATTCCAGGAAATTGCAGGAAGCCAAGACAGACCAGGACAATATGAAAGCCATACCGCATTTACTCTCCCAGGGCTTTGTAGAGTTGTTTCAGGCATCAATGTATTCGATCCCAAATTTAACATTGCTGCACCTGGGGCTGACCAGTCTGTCTATTTTCCTTACACTGAGAAACAAAAAAGAGTCTCATCATTTCATCCTGCCATTGAAGAACTACTGTATAGGAAGGAGGATAACAATGAACATATGGGGTTTCTAGTGGATAGGAAGAAACCTATCATCTTCTCAATGGCAAGGCTTGACACTGTTAAGAACATTACTGGTTTAGTTGAATGGTATGGCAAAAACAAGAGGCTCAGAAATCTGGTTAACCTTGTAGTAGTTGGAGGCTTCTTTGACCCTTCAAAATCAAAAGATAGAGAGGAAATAGCAGAAATTAAAAAGATGCATTCACTGATAGAGAAGTACCAGCTCCAGGGTCAGATCAGATGGATAGCAGCACAGACTGATAGGAACCGCAATGGAGAACTCTACCGTTGTATTGCGGACACCAGGGGAGCTTTTGTCCAACCTGCTCTATATGAAGCTTTTGGTCTTACTGTCATTGAGGCAATGAACTGTGGTTTACCCACTTTTGCAACCAACCAAGGAGGGCCAGCTGAAATCATTGTTGATGGGATCTCTGGTTTCCATATTGATCCCAACAATGGTGATGATGCAAGCAGCAAAATTGCTGATTTCTTTGAGAAATGCAAAACTGAGGCTACATACTGGGACAATTATTCAAAAGCGGGTTTGCAACGCATTTATGAATGCTACACTTGGAAGATATATGCAAACAAGGTGTTGAACATGGGCTGCACTTATACATTCTGGAGGCAGTTGAACAAAGAGCAGAAACAGGCAAAGCAAAGATACATCCAGATGTTCTTTAATCTCCAATATAGAAATTTGGTGAAGAATGTGCCTATCCCAAGTGACGAGCCTGAAAAACCAGCACCAAAGCCAGTCACCAAATCACAGACGACTCTAAGGCATGTCATGCTAAACGACATCATGCCTTGTTGCCTACACCCTGGAATCCTGGATGTTATTAGCTTCCACGCAAATCCGCTTATAGTAATATGCCTGGCACATCAACAACTGAGAATTGGAAAGTACAGCACAATTTCTCTCAAGTCTCAACAGAGCTACACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0008150 GO:0008194 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0030312 GO:0033036 GO:0033037 GO:0035251 GO:0044464 GO:0046527 GO:0051179 GO:0052545 GO:0071944 GO:0080165

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

883

Amino Acids

100.39

Weight (kDa)

6.53

Isoelectric Point (pI)

37.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SUS_N	PF24861	10 - 124	1.1e-45	Sucrose synthase N-terminal
SUS_EPBD	PF24862	160 - 247	5.7e-27	Sucrose synthase EPBD domain
GT-B_Sucrose_synth	PF00862	270 - 558	2e-169	Sucrose synthase first GT-B domain
Glycos_transf_1	PF00534	571 - 741	2.3e-30	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	576 - 731	6.2e-13	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004012)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37180 AT5G37180 AT5G37180
fragaria_vesca	FvH4_1g27400 FvH4_1g27400 FvH4_1g27400 FvH4_1g27400 FvH4_1g27400 FvH4_1g27400
malus_domestica	MD09G1280200.v1.1 MD17G1286900.v1.1 MD17G1287000.v1.1
prunus_persica	Prupe.3G014100_v2.0.a1 Prupe.3G014100_v2.0.a1 Prupe.3G014100_v2.0.a1
pyrus_communis	pycom09g18830 pycom17g27030 pycom17g27040
rosa_chinensis	RchiOBHm_Chr3g0488651
rosa_laevigata	RLG00000022933
rosa_multiflora	Rmu_sc0005363.1_g000051
rosa_roxburghii	Rroxscaffold_6G00393980
rosa_rugosa	Rorug03G0240100 Rorug03G0240100 Rorug03G0240200 Rorug03G0240200 Rorug03G0240200 Rorug03G0240200
rosa_samantha	Rh3AG288800 Rh3BG325400 Rh3CG323100 Rh3DG321800
rosa_wichuraiana	Rw3G025570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1601
Acc36I	ACCTGC	1 cut(s)	2032
Acc65I	GGTACC	1 cut(s)	78
AccB1I	GGYRCC	2 cut(s)	78, 1082
AccB7I	CCANNNNNTGG	2 cut(s)	199, 287
AciI	CCGC	5 cut(s)	1509, 1969, 1997, 2243, 2564
AclWI	GGATC	6 cut(s)	330, 747, 794, 1556, 2138, 2144
AcoI	YGGCCR	2 cut(s)	633, 880
AcsI	RAATTY	6 cut(s)	299, 535, 691, 1264, 1568, 2401
AcuI	CTGAAG	3 cut(s)	122, 611, 1056
AcvI	CACGTG	1 cut(s)	1053
AfaI	GTAC	6 cut(s)	80, 210, 786, 1091, 1919, 2612
AfiI	CCNNNNNNNGG	6 cut(s)	199, 287, 911, 1079, 1927, 2159
AflIII	ACRYGT	1 cut(s)	259
AgeI	ACCGGT	1 cut(s)	911
AjuI	GAANNNNNNNTTGG	4 cut(s)	182, 214, 876, 908
Alw26I	GTCTC	3 cut(s)	732, 1642, 2637
AlwI	GGATC	6 cut(s)	330, 747, 794, 1556, 2138, 2144
Ama87I	CYCGRG	1 cut(s)	661
AoxI	GGCC	5 cut(s)	393, 633, 880, 1272, 2105
ApeKI	GCWGC	7 cut(s)	17, 541, 617, 1580, 1949, 2175, 2310
ApoI	RAATTY	6 cut(s)	299, 535, 691, 1264, 1568, 2401
AsiGI	ACCGGT	1 cut(s)	911
Asp718I	GGTACC	1 cut(s)	78
AspS9I	GGNCC	3 cut(s)	393, 1132, 2105
AsuHPI	GGTGA	3 cut(s)	2174, 2419, 2455
AsuNHI	GCTAGC	1 cut(s)	517
AvaI	CYCGRG	1 cut(s)	661
AvaII	GGWCC	1 cut(s)	1132
BalI	TGGCCA	2 cut(s)	635, 882
BanI	GGYRCC	2 cut(s)	78, 1082
BbrPI	CACGTG	1 cut(s)	1053
BbsI	GAAGAC	2 cut(s)	1340, 1353
BbvI	GCAGC	7 cut(s)	29, 553, 604, 1567, 1961, 2187, 2297
BccI	CCATC	6 cut(s)	625, 1217, 1253, 1276, 1935, 2120
BclI	TGATCA	2 cut(s)	594, 937
BcoDI	GTCTC	3 cut(s)	732, 1642, 2637
BfaI	CTAG	3 cut(s)	518, 1406, 1709
BfmI	CTRYAG	2 cut(s)	15, 1197
BfuAI	ACCTGC	1 cut(s)	2032
BisI	GCNGC	7 cut(s)	18, 542, 618, 1581, 1950, 2176, 2311
BlsI	GCNGC	7 cut(s)	19, 543, 619, 1582, 1951, 2177, 2312
BmcAI	AGTACT	3 cut(s)	210, 786, 1091
Bme18I	GGWCC	1 cut(s)	1132
BmeT110I	CYCGRG	1 cut(s)	661
BmgT120I	GGNCC	3 cut(s)	393, 1132, 2105
BmiI	GGNNCC	7 cut(s)	80, 1048, 1071, 1084, 1110, 1133, 1967
BmrI	ACTGGG	1 cut(s)	2233
BmsI	GCATC	7 cut(s)	348, 504, 991, 1183, 1557, 1887, 2158
BmtI	GCTAGC	1 cut(s)	521
BmuI	ACTGGG	1 cut(s)	2233
BpiI	GAAGAC	2 cut(s)	1340, 1353
BplI	GAGNNNNNCTC	2 cut(s)	311, 343
BpmI	CTGGAG	3 cut(s)	780, 1910, 2347
BpuEI	CTTGAG	2 cut(s)	1196, 2612
BsaAI	YACGTR	1 cut(s)	1053
BsaJI	CCNNGG	9 cut(s)	286, 756, 1522, 1523, 1586, 1927, 2004, 2098, 2527
BsaWI	WCCGGW	1 cut(s)	911
BsaXI	ACNNNNNCTCC	2 cut(s)	2001, 2031
Bsc4I	CCNNNNNNNGG	6 cut(s)	199, 287, 911, 1079, 1927, 2159
Bse118I	RCCGGY	2 cut(s)	75, 911
Bse1I	ACTGG	4 cut(s)	1597, 1777, 2228, 2459
Bse3DI	GCAATG	4 cut(s)	1443, 1575, 1978, 2070
BseDI	CCNNGG	9 cut(s)	286, 756, 1522, 1523, 1586, 1927, 2004, 2098, 2527
BseGI	GGATG	4 cut(s)	1198, 1648, 2370, 2545
BseLI	CCNNNNNNNGG	6 cut(s)	199, 287, 911, 1079, 1927, 2159
BseMI	GCAATG	4 cut(s)	1443, 1575, 1978, 2070
BseNI	ACTGG	4 cut(s)	1597, 1777, 2228, 2459
BseRI	GAGGAG	2 cut(s)	438, 855
BseXI	GCAGC	7 cut(s)	29, 553, 604, 1567, 1961, 2187, 2297
BseYI	CCCAGC	1 cut(s)	521
BsgI	GTGCAG	3 cut(s)	1208, 1566, 2296
BshFI	GGCC	5 cut(s)	395, 635, 882, 1274, 2107
BshNI	GGYRCC	2 cut(s)	78, 1082
BshTI	ACCGGT	1 cut(s)	911
BsiHKCI	CYCGRG	1 cut(s)	661
BsiSI	CCGG	2 cut(s)	76, 912
BslFI	GGGAC	3 cut(s)	237, 365, 2240
BslI	CCNNNNNNNGG	6 cut(s)	199, 287, 911, 1079, 1927, 2159
BsmAI	GTCTC	3 cut(s)	732, 1642, 2637
BsmFI	GGGAC	3 cut(s)	237, 365, 2240
BsmI	GAATGC	3 cut(s)	1432, 1900, 2270
BsnI	GGCC	5 cut(s)	395, 635, 882, 1274, 2107
BsoBI	CYCGRG	1 cut(s)	661
BspACI	CCGC	5 cut(s)	1509, 1969, 1997, 2243, 2564
BspANI	GGCC	5 cut(s)	395, 635, 882, 1274, 2107
BspHI	TCATGA	1 cut(s)	504
BspLI	GGNNCC	7 cut(s)	80, 1048, 1071, 1084, 1110, 1133, 1967
BspMAI	CTGCAG	1 cut(s)	19
BspMI	ACCTGC	1 cut(s)	2032
BspOI	GCTAGC	1 cut(s)	521
BspPI	GGATC	6 cut(s)	330, 747, 794, 1556, 2138, 2144
BspT107I	GGYRCC	2 cut(s)	78, 1082
BsrDI	GCAATG	4 cut(s)	1443, 1575, 1978, 2070
BsrFI	RCCGGY	2 cut(s)	75, 911
BsrI	ACTGG	4 cut(s)	1597, 1777, 2228, 2459
BssAI	RCCGGY	2 cut(s)	75, 911
BssECI	CCNNGG	9 cut(s)	286, 756, 1522, 1523, 1586, 1927, 2004, 2098, 2527
BssT1I	CCWWGG	2 cut(s)	756, 2098
Bst4CI	ACNGT	6 cut(s)	346, 1671, 1759, 1988, 2053, 2072
Bst6I	CTCTTC	1 cut(s)	83
BstAPI	GCANNNNNTGC	2 cut(s)	1316, 2494
BstBAI	YACGTR	1 cut(s)	1053
BstC8I	GCNNGC	7 cut(s)	53, 519, 830, 993, 1450, 2109, 2173
BstF5I	GGATG	4 cut(s)	1198, 1648, 2370, 2545
BstMAI	GTCTC	3 cut(s)	732, 1642, 2637
BstMWI	GCNNNNNNNGC	7 cut(s)	17, 879, 988, 1186, 1316, 1589, 2494
BstNSI	RCATGY	4 cut(s)	55, 263, 1325, 2492
BstSFI	CTRYAG	2 cut(s)	15, 1197
BstV1I	GCAGC	7 cut(s)	29, 553, 604, 1567, 1961, 2187, 2297
BstV2I	GAAGAC	2 cut(s)	1340, 1353
BstX2I	RGATCY	4 cut(s)	322, 752, 799, 2130
BstYI	RGATCY	4 cut(s)	322, 752, 799, 2130
BsuRI	GGCC	5 cut(s)	395, 635, 882, 1274, 2107
BtsCI	GGATG	4 cut(s)	1198, 1648, 2370, 2545
BtsI	GCAGTG	1 cut(s)	612
BtsIMutI	CAGTG	7 cut(s)	342, 566, 612, 1254, 1617, 1755, 1904
BveI	ACCTGC	1 cut(s)	2032
Cac8I	GCNNGC	7 cut(s)	53, 519, 830, 993, 1450, 2109, 2173
CciI	TCATGA	1 cut(s)	504
Cfr10I	RCCGGY	2 cut(s)	75, 911
Cfr13I	GGNCC	3 cut(s)	393, 1132, 2105
CseI	GACGC	1 cut(s)	68
Csp6I	GTAC	6 cut(s)	79, 209, 785, 1090, 1918, 2611
CspAI	ACCGGT	1 cut(s)	911
CviQI	GTAC	6 cut(s)	79, 209, 785, 1090, 1918, 2611
DrdI	GACNNNNNNGTC	1 cut(s)	1601
DseDI	GACNNNNNNGTC	1 cut(s)	1601
EaeI	YGGCCR	2 cut(s)	633, 880
Eam1104I	CTCTTC	1 cut(s)	83
EarI	CTCTTC	1 cut(s)	83
Eco130I	CCWWGG	2 cut(s)	756, 2098
Eco32I	GATATC	1 cut(s)	1162
Eco47I	GGWCC	1 cut(s)	1132
Eco57I	CTGAAG	3 cut(s)	122, 611, 1056
Eco72I	CACGTG	1 cut(s)	1053
Eco88I	CYCGRG	1 cut(s)	661
EcoO109I	RGGNCCY	1 cut(s)	1132
EcoRI	GAATTC	1 cut(s)	535
EcoRV	GATATC	1 cut(s)	1162
EcoT14I	CCWWGG	2 cut(s)	756, 2098
EcoT22I	ATGCAT	2 cut(s)	412, 1902
ErhI	CCWWGG	2 cut(s)	756, 2098
FalI	AAGNNNNNCTT	4 cut(s)	360, 392, 1373, 1405
FaqI	GGGAC	3 cut(s)	237, 365, 2240
FauI	CCCGC	1 cut(s)	2236
FauNDI	CATATG	2 cut(s)	84, 1698
FbaI	TGATCA	2 cut(s)	594, 937
Fnu4HI	GCNGC	7 cut(s)	18, 542, 618, 1581, 1950, 2176, 2311
FokI	GGATG	4 cut(s)	1205, 1635, 2357, 2552
Fsp4HI	GCNGC	7 cut(s)	18, 542, 618, 1581, 1950, 2176, 2311
FspBI	CTAG	3 cut(s)	518, 1406, 1709
GluI	GCNGC	7 cut(s)	18, 542, 618, 1581, 1950, 2176, 2311
GsaI	CCCAGC	1 cut(s)	525
GsuI	CTGGAG	3 cut(s)	780, 1910, 2347
HaeIII	GGCC	5 cut(s)	395, 635, 882, 1274, 2107
HapII	CCGG	2 cut(s)	76, 912
HgaI	GACGC	1 cut(s)	68
HincII	GTYRAC	1 cut(s)	1822
HindII	GTYRAC	1 cut(s)	1822
HindIII	AAGCTT	2 cut(s)	623, 2037
HinfI	GANTC	8 cut(s)	5, 35, 483, 1026, 1349, 1635, 2479, 2532
HpaI	GTTAAC	1 cut(s)	1822
HpaII	CCGG	2 cut(s)	76, 912
HphI	GGTGA	3 cut(s)	2174, 2419, 2455
Hpy166II	GTNNAC	5 cut(s)	553, 655, 917, 1822, 2078
Hpy8I	GTNNAC	5 cut(s)	553, 655, 917, 1822, 2078
Hpy99I	CGWCG	2 cut(s)	62, 1143
HpyAV	CCTTC	6 cut(s)	667, 721, 1145, 1360, 1672, 1863
HpyCH4III	ACNGT	6 cut(s)	346, 1671, 1759, 1988, 2053, 2072
HpyCH4IV	ACGT	1 cut(s)	1052
HpyF10VI	GCNNNNNNNGC	7 cut(s)	17, 879, 988, 1186, 1316, 1589, 2494
HpySE526I	ACGT	1 cut(s)	1052
KpnI	GGTACC	1 cut(s)	82
Ksp22I	TGATCA	2 cut(s)	594, 937
KspAI	GTTAAC	1 cut(s)	1822
LmnI	GCTCC	4 cut(s)	799, 972, 1929, 2009
Lsp1109I	GCAGC	7 cut(s)	29, 553, 604, 1567, 1961, 2187, 2297
LweI	GCATC	7 cut(s)	348, 504, 991, 1183, 1557, 1887, 2158
MaeI	CTAG	3 cut(s)	518, 1406, 1709
MaeII	ACGT	1 cut(s)	1052
MaeIII	GTNAC	4 cut(s)	643, 1018, 2429, 2461
MfeI	CAATTG	2 cut(s)	432, 1314
MflI	RGATCY	4 cut(s)	322, 752, 799, 2130
MlsI	TGGCCA	2 cut(s)	635, 882
MluNI	TGGCCA	2 cut(s)	635, 882
MlyI	GAGTC	6 cut(s)	29, 477, 1020, 1343, 1644, 2473
MmeI	TCCRAC	3 cut(s)	1047, 1816, 2044
Mox20I	TGGCCA	2 cut(s)	635, 882
Mph1103I	ATGCAT	2 cut(s)	412, 1902
MscI	TGGCCA	2 cut(s)	635, 882
MslI	CAYNNNNRTG	3 cut(s)	344, 641, 2375
Msp20I	TGGCCA	2 cut(s)	635, 882
MspA1I	CMGCKG	1 cut(s)	2111
MspI	CCGG	2 cut(s)	76, 912
MunI	CAATTG	2 cut(s)	432, 1314
Mva1269I	GAATGC	3 cut(s)	1432, 1900, 2270
MwoI	GCNNNNNNNGC	7 cut(s)	17, 879, 988, 1186, 1316, 1589, 2494
NdeI	CATATG	2 cut(s)	84, 1698
NheI	GCTAGC	1 cut(s)	517
NlaIV	GGNNCC	7 cut(s)	80, 1048, 1071, 1084, 1110, 1133, 1967
NmuCI	GTSAC	3 cut(s)	643, 2429, 2461
NsiI	ATGCAT	2 cut(s)	412, 1902
NspI	RCATGY	4 cut(s)	55, 263, 1325, 2492
PaeI	GCATGC	1 cut(s)	55
PagI	TCATGA	1 cut(s)	504
PasI	CCCWGGG	1 cut(s)	1523
PciI	ACATGT	1 cut(s)	259
PcsI	WCGNNNNNNNCGW	1 cut(s)	668
PctI	GAATGC	3 cut(s)	1432, 1900, 2270
PfeI	GAWTC	2 cut(s)	5, 2532
PflMI	CCANNNNNTGG	2 cut(s)	199, 287
PfoI	TCCNGGA	2 cut(s)	1458, 2535
PinAI	ACCGGT	1 cut(s)	911
PkrI	GCNGC	7 cut(s)	19, 543, 619, 1582, 1951, 2177, 2312
PleI	GAGTC	6 cut(s)	29, 477, 1020, 1343, 1643, 2473
PmaCI	CACGTG	1 cut(s)	1053
PmlI	CACGTG	1 cut(s)	1053
PpsI	GAGTC	6 cut(s)	29, 477, 1020, 1343, 1643, 2473
Ppu21I	YACGTR	1 cut(s)	1053
PpuMI	RGGWCCY	1 cut(s)	1132
PscI	ACATGT	1 cut(s)	259
Psp5II	RGGWCCY	1 cut(s)	1132
PspCI	CACGTG	1 cut(s)	1053
PspFI	CCCAGC	1 cut(s)	521
PspN4I	GGNNCC	7 cut(s)	80, 1048, 1071, 1084, 1110, 1133, 1967
PspPI	GGNCC	3 cut(s)	393, 1132, 2105
PspPPI	RGGWCCY	1 cut(s)	1132
PstI	CTGCAG	1 cut(s)	19
PsuI	RGATCY	4 cut(s)	322, 752, 799, 2130
PvuII	CAGCTG	1 cut(s)	2111
RsaI	GTAC	6 cut(s)	80, 210, 786, 1091, 1919, 2612
RsaNI	GTAC	6 cut(s)	79, 209, 785, 1090, 1918, 2611
RseI	CAYNNNNRTG	3 cut(s)	344, 641, 2375
SatI	GCNGC	7 cut(s)	18, 542, 618, 1581, 1950, 2176, 2311
Sau96I	GGNCC	3 cut(s)	393, 1132, 2105
ScaI	AGTACT	3 cut(s)	210, 786, 1091
SchI	GAGTC	6 cut(s)	29, 477, 1020, 1343, 1644, 2473
SfaNI	GCATC	7 cut(s)	348, 504, 991, 1183, 1557, 1887, 2158
SfcI	CTRYAG	2 cut(s)	15, 1197
SgrAI	CRCCGGYG	1 cut(s)	911
SinI	GGWCC	1 cut(s)	1132
SmiMI	CAYNNNNRTG	3 cut(s)	344, 641, 2375
SmlI	CTYRAG	2 cut(s)	1175, 2627
SmoI	CTYRAG	2 cut(s)	1175, 2627
SphI	GCATGC	1 cut(s)	55
SsiI	CCGC	5 cut(s)	1509, 1969, 1997, 2243, 2564
SspI	AATATT	1 cut(s)	858
SspMI	CTAG	3 cut(s)	518, 1406, 1709
StyI	CCWWGG	2 cut(s)	756, 2098
TaaI	ACNGT	6 cut(s)	346, 1671, 1759, 1988, 2053, 2072
TaiI	ACGT	1 cut(s)	1055
TaqI	TCGA	5 cut(s)	470, 486, 512, 1212, 1560
TatI	WGTACW	4 cut(s)	208, 784, 1089, 2610
TfiI	GAWTC	2 cut(s)	5, 2532
TscAI	CASTG	7 cut(s)	349, 573, 619, 1261, 1624, 1762, 1911
TseFI	GTSAC	3 cut(s)	643, 2429, 2461
TseI	GCWGC	7 cut(s)	17, 541, 617, 1580, 1949, 2175, 2310
Tsp45I	GTSAC	3 cut(s)	643, 2429, 2461
TspRI	CASTG	7 cut(s)	349, 573, 619, 1261, 1624, 1762, 1911
Van91I	CCANNNNNTGG	2 cut(s)	199, 287
VpaK11BI	GGWCC	1 cut(s)	1132
XapI	RAATTY	6 cut(s)	299, 535, 691, 1264, 1568, 2401
XceI	RCATGY	4 cut(s)	55, 263, 1325, 2492
XspI	CTAG	3 cut(s)	518, 1406, 1709
ZrmI	AGTACT	3 cut(s)	210, 786, 1091
Zsp2I	ATGCAT	2 cut(s)	412, 1902

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.