Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005454.1

Orthogroup ID

OG0008721

Physical Location & Seq

Genomic Coordinates Forward (+)

2371 .. 7086

Gene Structure 4716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005454.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2568 bp

atggagaatttcactctcccatgcaaatcaaaccctctcattcccataataccctccaaaccaggcaacccatcagacttctcacccagacccaccaaggccaccatcactttctccaggaaaacccgcccaaatccacccgtagacaatttgaacctcctctgcaggagcggccagttcacggaggccatcgccgttctcgactcccttgcccaaagcgggtcgaaggtaccgcccactacttacatgaacttacttcagtgctgcattgacacaaattctattcaactgggccggaagctccatcagaatattgatgtggttgataaagtgaacccctttgtggagaccaagctggtgagcatgtacgcgaaatgtgggttcttggaagacgcacgcaaggtgttcgacggaatgcgtgagaggaatttgtactcttggtcggccatgatcggtgcgtgtctcagagaccggaggtggaatgaggtggtggagctttttgtgttgatggtgagagacggagttttgccggattactttctgtttccgaaggtattgcaggcctgtgggaactgtcgtgatttcgaggcctcgaaagtgatacattccatggtggtgaggtccaatttgagtggtactacacatataaacaattcgttattggcggtttacgccaagtgtgggaagttgaagtgggcgaggaagttttttgagaaaatggaggtgagggatggggtgacttggaacacaattatatctggttattgccagaatggtgagaatgaagaagctcggaggctgattgatgcaatgatcaagcaggggattgaaccggggttggtcacttggaatatattgatttctagttttaataagtcggggcagtgtgatgttgcgatggaactgatgaagaagatggagaactctgggatcactcctgatgtgtatacttggacttctatgatttcggggtttgctcagaacaacaggacgaatcaggcattggatttgtggaagaagatgcttttgtctggggtacaaccaaatggcattacgattgctagtgcaatctcagcttgcacatctttgaaatcactgaccaaaggtttggaaatttatgcttttgctgtgaagatgggactcattgatgatgtactcattggaaattcgctcattgacatgttttcaaagtgtggggacctggaagctgctgagcaaatctttactatgatctcagataaagacgtctacacttggaactccatgataggaggatattgccaagctaggtactgtggtaaggcctatgaactgttcatgaagatgcaggaatcagatgtacatcctaatgccatcacgtataatgtgatgatcacaggctacattcagaatggagatgctgatcaagcaatggatctcttccaaatgatggaacgagatgggaaagttaagcggaatacagcatcgtggaactctcttattgctggttttgctcaacttggggaaataaatgaggcacttaggatattcaggaagatgcaagccttcagtgttagccccaattcagttactttgttgagtatcctgcccgcttgtgggagtttagttgccatgaaaaaggtgaaagagatccattgtagtgtatttcgaagaaatttggagtctgaagtccctgttgcaaattctctgatagacacatatgcaaaatcaggaaacatagagtattcaagaaccatattcgatagactgtcatcgaaagatattattacctggaactcggcaatttctggttatgttttacatggtcatccagatattgcacttgatctttttgaccagatgaagaagttggggctaaaaccaaatagaggtacctttgctagtattctatatgcctacagtcttgctggactggtaaacgaggggacagaagctctttctagcatcagtgaagactatcaaataataccaggtccagaacattattcagctattgtagacctatatggacgttcgggtaggcttcaagcagcaatggggtttattgaagatatgccgatagaaccagactcctctgtttgggctgccttacttacagcatgcaggattcatgggaaccttggcttggcaattcatgcaggggagcgcgtaattgacttggaaccagcgaatgttctgattcaacagtttttattacaggcatatgcattatccgggaagccggatgatacctcaaagttgagaaggtttggaaaagagaatgcaacaataaagagatctcttggtcagtgctggatggaagtcaaaaacacagtgcatacgtttgttgcaggtgataggtcgaaattatgctcaaagtatgtaaactcgtggtttcaagacatagcagaaaaggcaaaaggacctggttttcgttgtgcgcttggtgttgaggatgaagaggagggaatcagcatggcgtgccagcaccgtggggtgcagtcgtcgggggagtcccttgacctgacttcttcctcaagcgttgtggacgaggagagcaccaacctcgccacaacagttcttctctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Calreticulin DYW_deaminase Jacalin PPR PPR_2 PPR_3

Protein Analysis

855

Amino Acids

94.79

Weight (kDa)

6.5

Isoelectric Point (pI)

39.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19720
fragaria_vesca	FvH4_5g24641
malus_domestica	MD08G1023800.v1.1 MD15G1021300.v1.1
prunus_persica	Prupe.1G227600_v2.0.a1 Prupe.1G373200_v2.0.a1 Prupe.1G373200_v2.0.a1
pyrus_communis	pycom08g01860 pycom15g01760 pycom15g01770
rosa_chinensis	RchiOBHm_Chr6g0301801
rosa_laevigata	RLG00000011220
rosa_multiflora	Rmu_sc0005454.1_g000002
rosa_roxburghii	Rroxscaffold_7G00166390
rosa_rugosa	Rorug06G0309900.1 Rorug06G0310000.1 Rorug06G0310100 Rorug06G0310100
rosa_samantha	Rh6AG421700 Rh6BG428400 Rh6CG435000 Rh6DG421800
rosa_wichuraiana	Rw6G036520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2321
AatII	GACGTC	1 cut(s)	1248
Acc36I	ACCTGC	1 cut(s)	2321
Acc65I	GGTACC	2 cut(s)	229, 1871
AccB1I	GGYRCC	2 cut(s)	229, 1871
AccB7I	CCANNNNNTGG	1 cut(s)	1429
AccBSI	CCGCTC	1 cut(s)	171
AccI	GTMKAC	4 cut(s)	144, 947, 1248, 1998
AccII	CGCG	2 cut(s)	371, 2148
AciI	CCGC	7 cut(s)	127, 171, 219, 233, 665, 1453, 1590
AclWI	GGATC	3 cut(s)	938, 1422, 1624
AcoI	YGGCCR	2 cut(s)	172, 444
AcsI	RAATTY	7 cut(s)	7, 277, 427, 1113, 1165, 1654, 1681
AcuI	CTGAAG	3 cut(s)	242, 1531, 1686
AcyI	GRCGYC	1 cut(s)	1245
AfaI	GTAC	9 cut(s)	231, 368, 434, 637, 1038, 1155, 1292, 1341, 1873
AflIII	ACRYGT	1 cut(s)	1179
AjnI	CCWGG	6 cut(s)	61, 116, 1200, 1769, 1969, 2404
AjuI	GAANNNNNNNTTGG	4 cut(s)	986, 1018, 2108, 2140
AluBI	AGCT	9 cut(s)	301, 355, 496, 791, 1076, 1208, 1286, 1934, 1991
AluI	AGCT	9 cut(s)	301, 355, 496, 791, 1076, 1208, 1286, 1934, 1991
Alw21I	GWGCWC	1 cut(s)	2540
Alw26I	GTCTC	4 cut(s)	341, 462, 467, 510
AlwI	GGATC	3 cut(s)	938, 1422, 1624
AoxI	GGCC	8 cut(s)	99, 172, 186, 292, 444, 561, 588, 1302
ApeKI	GCWGC	4 cut(s)	264, 1208, 2030, 2084
ApoI	RAATTY	7 cut(s)	7, 277, 427, 1113, 1165, 1654, 1681
ArsI	GACNNNNNNTTYG	4 cut(s)	1090, 1122, 2394, 2426
Asp718I	GGTACC	2 cut(s)	229, 1871
AspLEI	GCGC	2 cut(s)	2148, 2422
AspS9I	GGNCC	5 cut(s)	292, 621, 1198, 1973, 2402
AsuC2I	CCSGG	2 cut(s)	834, 2215
AsuHPI	GGTGA	9 cut(s)	75, 370, 523, 628, 736, 748, 788, 1633, 2345
AsuII	TTCGAA	1 cut(s)	1648
AvaII	GGWCC	4 cut(s)	621, 1198, 1973, 2402
BaeI	ACNNNNGTAYC	2 cut(s)	1282, 1315
BanI	GGYRCC	2 cut(s)	229, 1871
BauI	CACGAG	1 cut(s)	2368
BbsI	GAAGAC	2 cut(s)	396, 1959
Bbv12I	GWGCWC	1 cut(s)	2540
BbvI	GCAGC	4 cut(s)	251, 1195, 2042, 2071
BceAI	ACGGC	1 cut(s)	179
BcgI	CGANNNNNNTGC	8 cut(s)	191, 225, 388, 422, 538, 572, 2527, 2561
BciT130I	CCWGG	6 cut(s)	63, 118, 1202, 1771, 1971, 2406
BciVI	GTATCC	1 cut(s)	1592
BclI	TGATCA	3 cut(s)	813, 1371, 1402
BcnI	CCSGG	2 cut(s)	834, 2215
BcoDI	GTCTC	4 cut(s)	341, 462, 467, 510
BfaI	CTAG	6 cut(s)	864, 1062, 1287, 1881, 1941, 2566
BfmI	CTRYAG	2 cut(s)	163, 1897
BfuAI	ACCTGC	1 cut(s)	2321
BfuI	GTATCC	1 cut(s)	1592
BglII	AGATCT	1 cut(s)	2276
BisI	GCNGC	5 cut(s)	172, 265, 1209, 2031, 2085
BlpI	GCTNAGC	1 cut(s)	1212
BlsI	GCNGC	5 cut(s)	173, 266, 1210, 2032, 2086
Bme1390I	CCNGG	8 cut(s)	63, 118, 834, 1202, 1771, 1971, 2215, 2406
Bme18I	GGWCC	4 cut(s)	621, 1198, 1973, 2402
BmgT120I	GGNCC	5 cut(s)	292, 621, 1198, 1973, 2402
BmiI	GGNNCC	5 cut(s)	231, 1199, 1873, 2117, 2163
BmrFI	CCNGG	8 cut(s)	63, 118, 834, 1202, 1771, 1971, 2215, 2406
BmrI	ACTGGG	1 cut(s)	299
BmsI	GCATC	7 cut(s)	796, 1011, 1314, 1387, 1472, 1527, 1953
BmuI	ACTGGG	1 cut(s)	299
BpiI	GAAGAC	2 cut(s)	396, 1959
BpmI	CTGGAG	1 cut(s)	100
Bpu1102I	GCTNAGC	1 cut(s)	1212
Bpu14I	TTCGAA	1 cut(s)	1648
BpuEI	CTTGAG	1 cut(s)	2500
BpuMI	CCSGG	2 cut(s)	834, 2215
BsaAI	YACGTR	1 cut(s)	1359
BsaBI	GATNNNNATC	2 cut(s)	1341, 1401
BsaHI	GRCGYC	1 cut(s)	1245
BsaI	GGTCTC	2 cut(s)	341, 462
BsaJI	CCNNGG	5 cut(s)	96, 609, 833, 2119, 2470
BsaWI	WCCGGW	1 cut(s)	471
Bse1I	ACTGG	3 cut(s)	175, 294, 1917
Bse3DI	GCAATG	3 cut(s)	816, 1416, 2040
Bse8I	GATNNNNATC	2 cut(s)	1341, 1401
BseBI	CCWGG	6 cut(s)	63, 118, 1202, 1771, 1971, 2406
BseDI	CCNNGG	5 cut(s)	96, 609, 833, 2119, 2470
BseGI	GGATG	6 cut(s)	736, 1342, 1807, 2230, 2301, 2440
BseJI	GATNNNNATC	2 cut(s)	1341, 1401
BseMI	GCAATG	3 cut(s)	816, 1416, 2040
BseMII	CTCAG	5 cut(s)	478, 992, 1086, 1203, 1248
BseNI	ACTGG	3 cut(s)	175, 294, 1917
BseRI	GAGGAG	4 cut(s)	149, 2062, 2456, 2546
BseXI	GCAGC	4 cut(s)	251, 1195, 2042, 2071
BsgI	GTGCAG	1 cut(s)	2498
Bsh1236I	CGCG	2 cut(s)	371, 2148
BshFI	GGCC	8 cut(s)	101, 174, 188, 294, 446, 563, 590, 1304
BshNI	GGYRCC	2 cut(s)	229, 1871
BsiHKAI	GWGCWC	1 cut(s)	2540
BsiSI	CCGG	6 cut(s)	295, 472, 530, 833, 2214, 2222
BslFI	GGGAC	5 cut(s)	1152, 1211, 1655, 1939, 2479
BsmAI	GTCTC	4 cut(s)	341, 462, 467, 510
BsmBI	CGTCTC	1 cut(s)	510
BsmFI	GGGAC	5 cut(s)	1152, 1211, 1655, 1939, 2479
BsmI	GAATGC	2 cut(s)	420, 2266
BsnI	GGCC	8 cut(s)	101, 174, 188, 294, 446, 563, 590, 1304
Bso31I	GGTCTC	2 cut(s)	341, 462
Bsp119I	TTCGAA	1 cut(s)	1648
Bsp1286I	GDGCHC	1 cut(s)	2540
Bsp1407I	TGTACA	1 cut(s)	1339
Bsp1720I	GCTNAGC	1 cut(s)	1212
Bsp19I	CCATGG	1 cut(s)	609
BspACI	CCGC	7 cut(s)	127, 171, 219, 233, 665, 1453, 1590
BspANI	GGCC	8 cut(s)	101, 174, 188, 294, 446, 563, 590, 1304
BspCNI	CTCAG	5 cut(s)	477, 991, 1085, 1204, 1247
BspFNI	CGCG	2 cut(s)	371, 2148
BspHI	TCATGA	1 cut(s)	1317
BspLI	GGNNCC	5 cut(s)	231, 1199, 1873, 2117, 2163
BspMAI	CTGCAG	1 cut(s)	167
BspMI	ACCTGC	1 cut(s)	2321
BspPI	GGATC	3 cut(s)	938, 1422, 1624
BspT104I	TTCGAA	1 cut(s)	1648
BspT107I	GGYRCC	2 cut(s)	229, 1871
BspTNI	GGTCTC	2 cut(s)	341, 462
BsrBI	CCGCTC	1 cut(s)	171
BsrDI	GCAATG	3 cut(s)	816, 1416, 2040
BsrGI	TGTACA	1 cut(s)	1339
BsrI	ACTGG	3 cut(s)	175, 294, 1917
BssECI	CCNNGG	5 cut(s)	96, 609, 833, 2119, 2470
BssNAI	GTATAC	1 cut(s)	948
BssNI	GRCGYC	1 cut(s)	1245
BssSI	CACGAG	1 cut(s)	2368
BssT1I	CCWWGG	3 cut(s)	96, 609, 2119
Bst1107I	GTATAC	1 cut(s)	948
Bst2BI	CACGAG	1 cut(s)	2368
Bst2UI	CCWGG	6 cut(s)	63, 118, 1202, 1771, 1971, 2406
Bst4CI	ACNGT	9 cut(s)	575, 1295, 1314, 1749, 1901, 2187, 2314, 2471, 2557
Bst6I	CTCTTC	2 cut(s)	1424, 2433
BstACI	GRCGYC	1 cut(s)	1245
BstAPI	GCANNNNNTGC	2 cut(s)	2135, 2460
BstAUI	TGTACA	1 cut(s)	1339
BstBAI	YACGTR	1 cut(s)	1359
BstBI	TTCGAA	1 cut(s)	1648
BstC8I	GCNNGC	8 cut(s)	397, 561, 1078, 1542, 1590, 2101, 2461, 2465
BstDEI	CTNAG	6 cut(s)	464, 978, 1072, 1212, 1234, 1520
BstDSI	CCRYGG	2 cut(s)	609, 2470
BstF5I	GGATG	6 cut(s)	736, 1342, 1807, 2230, 2301, 2440
BstFNI	CGCG	2 cut(s)	371, 2148
BstHHI	GCGC	2 cut(s)	2148, 2422
BstMAI	GTCTC	4 cut(s)	341, 462, 467, 510
BstMWI	GCNNNNNNNGC	8 cut(s)	171, 671, 1073, 1406, 1490, 2135, 2393, 2460
BstNI	CCWGG	6 cut(s)	63, 118, 1202, 1771, 1971, 2406
BstNSI	RCATGY	3 cut(s)	367, 1183, 2103
BstSCI	CCNGG	8 cut(s)	61, 116, 832, 1200, 1769, 1969, 2213, 2404
BstSFI	CTRYAG	2 cut(s)	163, 1897
BstUI	CGCG	2 cut(s)	371, 2148
BstV1I	GCAGC	4 cut(s)	251, 1195, 2042, 2071
BstV2I	GAAGAC	2 cut(s)	396, 1959
BstX2I	RGATCY	3 cut(s)	1414, 1629, 2276
BstXI	CCANNNNNNTGG	2 cut(s)	1108, 2471
BstYI	RGATCY	3 cut(s)	1414, 1629, 2276
BstZ17I	GTATAC	1 cut(s)	948
BsuI	GTATCC	1 cut(s)	1592
BsuRI	GGCC	8 cut(s)	101, 174, 188, 294, 446, 563, 590, 1304
BtgI	CCRYGG	2 cut(s)	609, 2470
BtgZI	GCGATG	2 cut(s)	175, 911
BtsCI	GGATG	6 cut(s)	736, 1342, 1807, 2230, 2301, 2440
BtsI	GCAGTG	1 cut(s)	890
BtsIMutI	CAGTG	7 cut(s)	266, 890, 1094, 1555, 1954, 2294, 2319
BveI	ACCTGC	1 cut(s)	2321
Cac8I	GCNNGC	8 cut(s)	397, 561, 1078, 1542, 1590, 2101, 2461, 2465
CciI	TCATGA	1 cut(s)	1317
CfoI	GCGC	2 cut(s)	2148, 2422
Cfr13I	GGNCC	5 cut(s)	292, 621, 1198, 1973, 2402
CseI	GACGC	1 cut(s)	401
CsiI	ACCWGGT	2 cut(s)	1969, 2404
Csp6I	GTAC	9 cut(s)	230, 367, 433, 636, 1037, 1154, 1291, 1340, 1872
CspCI	CAANNNNNGTGG	4 cut(s)	613, 648, 2505, 2540
CviQI	GTAC	9 cut(s)	230, 367, 433, 636, 1037, 1154, 1291, 1340, 1872
DdeI	CTNAG	6 cut(s)	464, 978, 1072, 1212, 1234, 1520
EaeI	YGGCCR	2 cut(s)	172, 444
Eam1104I	CTCTTC	2 cut(s)	1424, 2433
EarI	CTCTTC	2 cut(s)	1424, 2433
Eco130I	CCWWGG	3 cut(s)	96, 609, 2119
Eco147I	AGGCCT	3 cut(s)	563, 590, 1304
Eco31I	GGTCTC	2 cut(s)	341, 462
Eco47I	GGWCC	4 cut(s)	621, 1198, 1973, 2402
Eco57I	CTGAAG	3 cut(s)	242, 1531, 1686
EcoO109I	RGGNCCY	2 cut(s)	1198, 2402
EcoRII	CCWGG	6 cut(s)	61, 116, 1200, 1769, 1969, 2404
EcoT14I	CCWWGG	3 cut(s)	96, 609, 2119
EcoT22I	ATGCAT	1 cut(s)	2209
ErhI	CCWWGG	3 cut(s)	96, 609, 2119
Esp3I	CGTCTC	1 cut(s)	510
FaqI	GGGAC	5 cut(s)	1152, 1211, 1655, 1939, 2479
FauI	CCCGC	3 cut(s)	134, 212, 1597
FauNDI	CATATG	2 cut(s)	1699, 2203
FbaI	TGATCA	3 cut(s)	813, 1371, 1402
FblI	GTMKAC	4 cut(s)	144, 947, 1248, 1998
Fnu4HI	GCNGC	5 cut(s)	172, 265, 1209, 2031, 2085
FokI	GGATG	6 cut(s)	743, 1329, 1794, 2237, 2308, 2447
Fsp4HI	GCNGC	5 cut(s)	172, 265, 1209, 2031, 2085
FspBI	CTAG	6 cut(s)	864, 1062, 1287, 1881, 1941, 2566
GlaI	GCGC	2 cut(s)	2147, 2421
GluI	GCNGC	5 cut(s)	172, 265, 1209, 2031, 2085
GsuI	CTGGAG	1 cut(s)	100
HaeIII	GGCC	8 cut(s)	101, 174, 188, 294, 446, 563, 590, 1304
HapII	CCGG	6 cut(s)	295, 472, 530, 833, 2214, 2222
HgaI	GACGC	1 cut(s)	401
HhaI	GCGC	2 cut(s)	2148, 2422
Hin1I	GRCGYC	1 cut(s)	1245
Hin6I	GCGC	2 cut(s)	2146, 2420
HinP1I	GCGC	2 cut(s)	2146, 2420
HpaII	CCGG	6 cut(s)	295, 472, 530, 833, 2214, 2222
HphI	GGTGA	9 cut(s)	75, 370, 523, 628, 736, 748, 788, 1633, 2345
Hpy99I	CGWCG	2 cut(s)	413, 2488
HpyAV	CCTTC	4 cut(s)	220, 544, 1555, 2238
HpyCH4III	ACNGT	9 cut(s)	575, 1295, 1314, 1749, 1901, 2187, 2314, 2471, 2557
HpyCH4IV	ACGT	4 cut(s)	1245, 1358, 2011, 2321
HpyF10VI	GCNNNNNNNGC	8 cut(s)	171, 671, 1073, 1406, 1490, 2135, 2393, 2460
HpyF3I	CTNAG	6 cut(s)	464, 978, 1072, 1212, 1234, 1520
HpySE526I	ACGT	4 cut(s)	1245, 1358, 2011, 2321
Hsp92I	GRCGYC	1 cut(s)	1245
HspAI	GCGC	2 cut(s)	2146, 2420
KpnI	GGTACC	2 cut(s)	233, 1875
Ksp22I	TGATCA	3 cut(s)	813, 1371, 1402
LmnI	GCTCC	4 cut(s)	168, 306, 493, 2143
Lsp1109I	GCAGC	4 cut(s)	251, 1195, 2042, 2071
LweI	GCATC	7 cut(s)	796, 1011, 1314, 1387, 1472, 1527, 1953
MabI	ACCWGGT	2 cut(s)	1969, 2404
MaeI	CTAG	6 cut(s)	864, 1062, 1287, 1881, 1941, 2566
MaeII	ACGT	4 cut(s)	1245, 1358, 2011, 2321
MaeIII	GTNAC	3 cut(s)	736, 841, 1567
MbiI	CCGCTC	1 cut(s)	171
MflI	RGATCY	3 cut(s)	1414, 1629, 2276
MhlI	GDGCHC	1 cut(s)	2540
MlyI	GAGTC	5 cut(s)	197, 1134, 1670, 2063, 2501
Mph1103I	ATGCAT	1 cut(s)	2209
MseI	TTAA	2 cut(s)	870, 1449
MslI	CAYNNNNRTG	5 cut(s)	614, 1178, 1322, 1347, 1638
MspI	CCGG	6 cut(s)	295, 472, 530, 833, 2214, 2222
MspR9I	CCNGG	8 cut(s)	63, 118, 834, 1202, 1771, 1971, 2215, 2406
Mva1269I	GAATGC	2 cut(s)	420, 2266
MvaI	CCWGG	6 cut(s)	63, 118, 1202, 1771, 1971, 2406
MvnI	CGCG	2 cut(s)	371, 2148
MwoI	GCNNNNNNNGC	8 cut(s)	171, 671, 1073, 1406, 1490, 2135, 2393, 2460
NciI	CCSGG	2 cut(s)	834, 2215
NcoI	CCATGG	1 cut(s)	609
NdeI	CATATG	2 cut(s)	1699, 2203
NlaIV	GGNNCC	5 cut(s)	231, 1199, 1873, 2117, 2163
NmeAIII	GCCGAG	1 cut(s)	1757
NmuCI	GTSAC	2 cut(s)	736, 841
NsiI	ATGCAT	1 cut(s)	2209
NspI	RCATGY	3 cut(s)	367, 1183, 2103
NspV	TTCGAA	1 cut(s)	1648
PaeI	GCATGC	1 cut(s)	2103
PagI	TCATGA	1 cut(s)	1317
PaqCI	CACCTGC	1 cut(s)	2321
PceI	AGGCCT	3 cut(s)	563, 590, 1304
PciI	ACATGT	1 cut(s)	1179
PcsI	WCGNNNNNNNCGW	1 cut(s)	198
PctI	GAATGC	2 cut(s)	420, 2266
PfeI	GAWTC	5 cut(s)	994, 1331, 2107, 2179, 2448
PflMI	CCANNNNNTGG	1 cut(s)	1429
PfoI	TCCNGGA	2 cut(s)	116, 2213
PkrI	GCNGC	5 cut(s)	173, 266, 1210, 2032, 2086
PleI	GAGTC	5 cut(s)	197, 1134, 1669, 2063, 2500
PpsI	GAGTC	5 cut(s)	197, 1134, 1669, 2063, 2500
Ppu21I	YACGTR	1 cut(s)	1359
PpuMI	RGGWCCY	2 cut(s)	1198, 2402
PscI	ACATGT	1 cut(s)	1179
Psp5II	RGGWCCY	2 cut(s)	1198, 2402
Psp6I	CCWGG	6 cut(s)	61, 116, 1200, 1769, 1969, 2404
PspGI	CCWGG	6 cut(s)	61, 116, 1200, 1769, 1969, 2404
PspN4I	GGNNCC	5 cut(s)	231, 1199, 1873, 2117, 2163
PspPI	GGNCC	5 cut(s)	292, 621, 1198, 1973, 2402
PspPPI	RGGWCCY	2 cut(s)	1198, 2402
PstI	CTGCAG	1 cut(s)	167
PsuI	RGATCY	3 cut(s)	1414, 1629, 2276
RsaI	GTAC	9 cut(s)	231, 368, 434, 637, 1038, 1155, 1292, 1341, 1873
RsaNI	GTAC	9 cut(s)	230, 367, 433, 636, 1037, 1154, 1291, 1340, 1872
RseI	CAYNNNNRTG	5 cut(s)	614, 1178, 1322, 1347, 1638
SaqAI	TTAA	2 cut(s)	870, 1449
SatI	GCNGC	5 cut(s)	172, 265, 1209, 2031, 2085
Sau96I	GGNCC	5 cut(s)	292, 621, 1198, 1973, 2402
SchI	GAGTC	5 cut(s)	197, 1134, 1670, 2063, 2501
ScrFI	CCNGG	8 cut(s)	63, 118, 834, 1202, 1771, 1971, 2215, 2406
SduI	GDGCHC	1 cut(s)	2540
SexAI	ACCWGGT	2 cut(s)	1969, 2404
SfaNI	GCATC	7 cut(s)	796, 1011, 1314, 1387, 1472, 1527, 1953
SfcI	CTRYAG	2 cut(s)	163, 1897
SfuI	TTCGAA	1 cut(s)	1648
SinI	GGWCC	4 cut(s)	621, 1198, 1973, 2402
SmiMI	CAYNNNNRTG	5 cut(s)	614, 1178, 1322, 1347, 1638
SmlI	CTYRAG	1 cut(s)	2515
SmoI	CTYRAG	1 cut(s)	2515
SphI	GCATGC	1 cut(s)	2103
SseBI	AGGCCT	3 cut(s)	563, 590, 1304
SsiI	CCGC	7 cut(s)	127, 171, 219, 233, 665, 1453, 1590
SspI	AATATT	1 cut(s)	313
SspMI	CTAG	6 cut(s)	864, 1062, 1287, 1881, 1941, 2566
StuI	AGGCCT	3 cut(s)	563, 590, 1304
StyD4I	CCNGG	8 cut(s)	61, 116, 832, 1200, 1769, 1969, 2213, 2404
StyI	CCWWGG	3 cut(s)	96, 609, 2119
TaaI	ACNGT	9 cut(s)	575, 1295, 1314, 1749, 1901, 2187, 2314, 2471, 2557
TaiI	ACGT	4 cut(s)	1248, 1361, 2014, 2324
TaqI	TCGA	9 cut(s)	201, 224, 408, 585, 593, 1648, 1740, 1754, 2342
TatI	WGTACW	3 cut(s)	432, 1153, 1339
TauI	GCSGC	1 cut(s)	174
TfiI	GAWTC	5 cut(s)	994, 1331, 2107, 2179, 2448
Tru1I	TTAA	2 cut(s)	870, 1449
Tru9I	TTAA	2 cut(s)	870, 1449
TscAI	CASTG	7 cut(s)	266, 890, 1101, 1555, 1954, 2294, 2319
TseFI	GTSAC	2 cut(s)	736, 841
TseI	GCWGC	4 cut(s)	264, 1208, 2030, 2084
Tsp45I	GTSAC	2 cut(s)	736, 841
TspGWI	ACGGA	3 cut(s)	197, 426, 534
TspRI	CASTG	7 cut(s)	266, 890, 1101, 1555, 1954, 2294, 2319
Van91I	CCANNNNNTGG	1 cut(s)	1429
VpaK11BI	GGWCC	4 cut(s)	621, 1198, 1973, 2402
XapI	RAATTY	7 cut(s)	7, 277, 427, 1113, 1165, 1654, 1681
XceI	RCATGY	3 cut(s)	367, 1183, 2103
XmiI	GTMKAC	4 cut(s)	144, 947, 1248, 1998
XspI	CTAG	6 cut(s)	864, 1062, 1287, 1881, 1941, 2566
ZraI	GACGTC	1 cut(s)	1246
Zsp2I	ATGCAT	1 cut(s)	2209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.