Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006203.1

Orthogroup ID

OG0004790

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 8410

Gene Structure 8410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006203.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2851 bp

caagatggaatcttccgcagaccaccaagctcaacaggaggaggacgacgacgaggttgagcattttgatgatttcactctcgcctcttcatgggaaaagttcatttctgatatagaggcggtttgtaggcaatggatagccgacggtccgaaaaatctgttgaaaaaggatgcaagggaggtttcagaggagttttataaggttaaatatgagttgaagtttgcagtgaaaagttactgcatggaatactactttggatctaaaaatgacggtaaagttatggattgggatcccagattgcatgatttgcagttgtgctttggggtcaaagattttttggtaattgctccacaaagtgccagcggagtggttcttgacgcgcctgaggctagcaagcttttaagtgcagttgcaattgctttatcaaattgttcaagtttgtggcccgcatttgtcccggtgcatgttcctgctaggaaagcttacattggcattcagaatatgggaacagttttcactagaagatttgaggctgatcatattggtagccaggttccagtaaaacttatgcatttggaaggattatacgagttgtttgtttctaaatttgcctactccacattggacttttccatgcatctcttcaaagtccattttactatgaagctaacctacagatcccttccgcctgatgatgatgatgtacaaagagctgatgctgatgttactgaatctggagacgatcttggtggtgacatgcacaatagaacacaatgggatgatgattgtccatggagtgagtggtattctgctgaagaccctgtaaaaggatttgagttggttgccttgtggtctgaaaaggtggtcgagagctccctggagatggctgaactggaaaattcttcaccccatgaggcccaaaaatggatattatctcctaatatgtcttcaactttaactgattcttccaaaggaaacagaattggatttgctagccagctgtgccttttggttgatgcattgaacaagtcgtttgaggctcagtttatggaagatttcgtgtcagttgaaaacccaggttctgataatttgaactcctccatggttatacctcctcctacagttattgatcgtgtgctcaaggaactctttcatgatggtgcacaattccccagttttgcctctgctgagcacaagacttctcgaataaaggccgcacctctggaatccctttttgcacagttttgtctgcattctctttggtttggaaactgcaatatacgtgctatttctgttatctggatagagtttgttcgagaagttcggtggtgttgggaagagtcacagccattgcccttaatgccagcctttggttcaattgatctgtccacttgtgtgatttaccagaaacttcatatgcttgctatatgcatcgagaggaagcgtcaattgaatgaagaatttcaagattgtgttggaaccatggatcattcatctcctagtattcaggaagatggtctggatgaggggtcagaggactcatgtattatgcaaacacctggtgaaaaccttgatgggaaacgagacagccctgcaattccagatgatttgcaagactctaaacagagtgtatcaagtcttggtgctaggcctgaacatgctgcagtgtctgctgatctaaaaccctcagattgtatcagaaggggttcagctggtgaggcaggtatgatgcttctgaaatcaaaacagagaatgcatgcaccattcacgcaggaggcaccactcatgacagaagacatgcatgaagaacggctccaggccgtggaagcctttggtgactcacttaacttttctgcttttttggagagagagatcttagcttcagacatgtcagcattcaaagcagcaaatccagacgctgtttttgaagattttattcgctggcattctcctggagattgggagagtgatgttacaaaagagagcggatcatccaataatcctgcaacagtgggttcaaaagatgactggccccctcgagggcggctgtcaaagagaatgtctgagagtgggaatttgtggcgaaagatttggaatgacgcacctgctttgccagcttctgagcagaagccgctaatggatccaaatagagagggagaaaagagtcttcattacctggaaaccttacgaccacatcagttgctcgagcaaatgatatgtactgccttcagcgcggctgcagatactttgaatcagactcattttggaggcttgaagcagatgacaaccaaactcgatcaactttaccttactatgacatctgcattgaggcctttgcaagcaaatcggctatctgctgacactgacactattgaagacataaaacggctgtgtggtgtttttgaacatgttgagaagctactcactattgcagcttctcttcatcgcaagttcttgcatgccccacgcctctctgaagcaatattccgtgactgctgcaacttttattttccaaggatgggaacaagctcctcaggcgacaatactccaaaggagtttgagaagcagcaaatagtaacgatgaatgaaagaccggtggtgtcaaatatgtttacgcctcccactgctaaccagtcatggcgaaaagttttgagcttgggcaatcttctcaacggccatgaacccgtcttgagagagatcatcttttccaagcgtgataaagtgagcggaaatcactatgctgcccgtactccaaatgcttatcaagatgaactagaaacatatagaatgtacatatgtggaacctcaaatgacctccgtatagcactttctgttgtttcttgtgattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rab3-GTPase_cat

Protein Analysis

949

Amino Acids

106.86

Weight (kDa)

4.99

Isoelectric Point (pI)

49.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004790)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58510 AT5G58510
fragaria_vesca	FvH4_3g39400 FvH4_3g39400 FvH4_3g39400 FvH4_3g39400
malus_domestica	MD11G1065500.v1.1
prunus_persica	Prupe.6G051700_v2.0.a1 Prupe.6G051700_v2.0.a1 Prupe.6G051700_v2.0.a1 Prupe.6G051700_v2.0.a1 Prupe.6G051700_v2.0.a1
pyrus_communis	pycom11g05550
rosa_chinensis	RchiOBHm_Chr5g0070931
rosa_laevigata	RLG00000036172
rosa_multiflora	Rmu_sc0006203.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010270 Rroxscaffold_1G00026030 Rroxscaffold_3G00223950 Rroxscaffold_4G00311860 Rroxscaffold_5G00336150 Rroxscaffold_5G00336440 Rroxscaffold_6G00388970 Rroxscaffold_6G00423050
rosa_rugosa	Rorug05G0408600 Rorug05G0408700
rosa_samantha	Rh5AG464800 Rh5BG483500 Rh5CG508200 Rh5DG495100
rosa_wichuraiana	Rw5G043240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	199
AarI	CACCTGC	1 cut(s)	2114
AbsI	CCTCGAGG	1 cut(s)	2038
Acc36I	ACCTGC	2 cut(s)	1713, 2114
AccB1I	GGYRCC	1 cut(s)	1778
AccB7I	CCANNNNNTGG	2 cut(s)	1371, 1823
AccBSI	CCGCTC	2 cut(s)	1987, 2728
AccII	CGCG	2 cut(s)	381, 2235
AclWI	GGATC	8 cut(s)	266, 285, 298, 673, 1495, 1997, 2136, 2149
AcoI	YGGCCR	1 cut(s)	2675
AcsI	RAATTY	4 cut(s)	606, 899, 1461, 2075
AcuI	CTGAAG	4 cut(s)	835, 1867, 2213, 2497
AdeI	CACNNNGTG	2 cut(s)	357, 1563
AfaI	GTAC	4 cut(s)	706, 2222, 2750, 2793
AfiI	CCNNNNNNNGG	9 cut(s)	91, 828, 884, 925, 1371, 1823, 2040, 2041, 2520
AflIII	ACRYGT	2 cut(s)	1888, 2408
AgeI	ACCGGT	1 cut(s)	2594
AjnI	CCWGG	7 cut(s)	550, 877, 1076, 1559, 1816, 1952, 2176
AjuI	GAANNNNNNNTTGG	2 cut(s)	238, 270
AleI	CACNNNNGTG	1 cut(s)	1395
Alw21I	GWGCWC	4 cut(s)	876, 1141, 1166, 1195
Alw26I	GTCTC	2 cut(s)	733, 1579
Alw44I	GTGCAC	1 cut(s)	1162
AlwI	GGATC	8 cut(s)	266, 285, 298, 673, 1495, 1997, 2136, 2149
AlwNI	CAGNNNCTG	4 cut(s)	1083, 1671, 1920, 2121
Ama87I	CYCGRG	2 cut(s)	2038, 2205
AoxI	GGCC	8 cut(s)	444, 916, 1213, 1650, 1819, 2031, 2331, 2675
ApaLI	GTGCAC	1 cut(s)	1162
ApeKI	GCWGC	7 cut(s)	1662, 1905, 2238, 2433, 2497, 2567, 2742
ApoI	RAATTY	4 cut(s)	606, 899, 1461, 2075
ArsI	GACNNNNNNTTYG	4 cut(s)	1908, 1940, 2046, 2078
AsiGI	ACCGGT	1 cut(s)	2594
Asp700I	GAANNNNTTC	3 cut(s)	1150, 1462, 1706
AspLEI	GCGC	2 cut(s)	383, 2235
AspS9I	GGNCC	4 cut(s)	147, 445, 917, 2032
AsuC2I	CCSGG	1 cut(s)	459
AsuHPI	GGTGA	5 cut(s)	765, 898, 1575, 1728, 1848
AsuNHI	GCTAGC	2 cut(s)	390, 993
AvaI	CYCGRG	2 cut(s)	2038, 2205
AvaII	GGWCC	1 cut(s)	147
AxyI	CCTNAGG	2 cut(s)	385, 2534
BaeGI	GKGCMC	1 cut(s)	1166
BamHI	GGATCC	2 cut(s)	290, 2141
BanI	GGYRCC	1 cut(s)	1778
BanII	GRGCYC	1 cut(s)	876
BarI	GAAGNNNNNNTAC	2 cut(s)	657, 689
BbsI	GAAGAC	5 cut(s)	823, 940, 1801, 2160, 2383
Bbv12I	GWGCWC	4 cut(s)	876, 1141, 1166, 1195
BbvI	GCAGC	7 cut(s)	1649, 1917, 2225, 2445, 2484, 2579, 2729
BccI	CCATC	5 cut(s)	878, 1152, 1509, 1569, 2513
BceAI	ACGGC	4 cut(s)	1806, 1827, 2403, 2690
BcgI	CGANNNNNNTGC	2 cut(s)	2328, 2362
BciT130I	CCWGG	7 cut(s)	552, 879, 1078, 1561, 1818, 1954, 2178
BclI	TGATCA	1 cut(s)	536
BcnI	CCSGG	1 cut(s)	459
BcoDI	GTCTC	2 cut(s)	733, 1579
BfaI	CTAG	7 cut(s)	391, 475, 520, 994, 1501, 1648, 2775
BfmI	CTRYAG	4 cut(s)	674, 1120, 1663, 2239
BfuAI	ACCTGC	2 cut(s)	1713, 2114
BglII	AGATCT	1 cut(s)	1873
BlpI	GCTNAGC	1 cut(s)	1189
Bme1390I	CCNGG	8 cut(s)	459, 552, 879, 1078, 1561, 1818, 1954, 2178
Bme18I	GGWCC	1 cut(s)	147
BmeT110I	CYCGRG	2 cut(s)	2038, 2205
BmgT120I	GGNCC	4 cut(s)	147, 445, 917, 2032
BmiI	GGNNCC	8 cut(s)	292, 556, 1481, 1780, 1815, 2034, 2143, 2804
BmrFI	CCNGG	8 cut(s)	459, 552, 879, 1078, 1561, 1818, 1954, 2178
BmrI	ACTGGG	1 cut(s)	1168
BmsI	GCATC	6 cut(s)	161, 647, 707, 1007, 1441, 1720
BmtI	GCTAGC	2 cut(s)	394, 997
BmuI	ACTGGG	1 cut(s)	1168
BpiI	GAAGAC	5 cut(s)	823, 940, 1801, 2160, 2383
BpmI	CTGGAG	4 cut(s)	757, 900, 1800, 1975
Bpu1102I	GCTNAGC	1 cut(s)	1189
BpuEI	CTTGAG	2 cut(s)	1125, 2711
BpuMI	CCSGG	1 cut(s)	459
BsaAI	YACGTR	1 cut(s)	1284
BsaBI	GATNNNNATC	1 cut(s)	289
BsaJI	CCNNGG	7 cut(s)	792, 877, 1076, 1102, 1483, 1822, 2514
BsaWI	WCCGGW	1 cut(s)	2594
Bsc4I	CCNNNNNNNGG	9 cut(s)	91, 828, 884, 925, 1371, 1823, 2040, 2041, 2520
Bse118I	RCCGGY	1 cut(s)	2594
Bse1I	ACTGG	5 cut(s)	558, 898, 1174, 2034, 2633
Bse21I	CCTNAGG	2 cut(s)	385, 2534
Bse3DI	GCAATG	2 cut(s)	138, 1350
Bse8I	GATNNNNATC	1 cut(s)	289
BseBI	CCWGG	7 cut(s)	552, 879, 1078, 1561, 1818, 1954, 2178
BseDI	CCNNGG	7 cut(s)	792, 877, 1076, 1102, 1483, 1822, 2514
BseGI	GGATG	5 cut(s)	176, 785, 1529, 1992, 2524
BseJI	GATNNNNATC	1 cut(s)	289
BseLI	CCNNNNNNNGG	9 cut(s)	91, 828, 884, 925, 1371, 1823, 2040, 2041, 2520
BseMI	GCAATG	2 cut(s)	138, 1350
BseMII	CTCAG	7 cut(s)	376, 1056, 1180, 1702, 2056, 2113, 2548
BseNI	ACTGG	5 cut(s)	558, 898, 1174, 2034, 2633
BseRI	GAGGAG	5 cut(s)	54, 204, 1088, 1105, 2522
BseSI	GKGCMC	1 cut(s)	1166
BseXI	GCAGC	7 cut(s)	1649, 1917, 2225, 2445, 2484, 2579, 2729
BsgI	GTGCAG	1 cut(s)	427
Bsh1236I	CGCG	2 cut(s)	381, 2235
BshFI	GGCC	8 cut(s)	446, 918, 1215, 1652, 1821, 2033, 2333, 2677
BshNI	GGYRCC	1 cut(s)	1778
BshTI	ACCGGT	1 cut(s)	2594
BsiHKAI	GWGCWC	4 cut(s)	876, 1141, 1166, 1195
BsiHKCI	CYCGRG	2 cut(s)	2038, 2205
BsiSI	CCGG	2 cut(s)	459, 2595
BslFI	GGGAC	1 cut(s)	441
BslI	CCNNNNNNNGG	9 cut(s)	91, 828, 884, 925, 1371, 1823, 2040, 2041, 2520
BsmAI	GTCTC	2 cut(s)	733, 1579
BsmBI	CGTCTC	1 cut(s)	733
BsmFI	GGGAC	1 cut(s)	441
BsmI	GAATGC	5 cut(s)	493, 1253, 1759, 1896, 1946
BsnI	GGCC	8 cut(s)	446, 918, 1215, 1652, 1821, 2033, 2333, 2677
BsoBI	CYCGRG	2 cut(s)	2038, 2205
Bsp1286I	GDGCHC	4 cut(s)	876, 1141, 1166, 1195
Bsp1407I	TGTACA	2 cut(s)	704, 2791
Bsp1720I	GCTNAGC	1 cut(s)	1189
Bsp19I	CCATGG	3 cut(s)	792, 1102, 1483
BspANI	GGCC	8 cut(s)	446, 918, 1215, 1652, 1821, 2033, 2333, 2677
BspCNI	CTCAG	7 cut(s)	377, 1055, 1181, 1701, 2057, 2114, 2547
BspFNI	CGCG	2 cut(s)	381, 2235
BspHI	TCATGA	2 cut(s)	1154, 1786
BspLI	GGNNCC	8 cut(s)	292, 556, 1481, 1780, 1815, 2034, 2143, 2804
BspMAI	CTGCAG	2 cut(s)	1667, 2243
BspMI	ACCTGC	2 cut(s)	1713, 2114
BspOI	GCTAGC	2 cut(s)	394, 997
BspPI	GGATC	8 cut(s)	266, 285, 298, 673, 1495, 1997, 2136, 2149
BspT107I	GGYRCC	1 cut(s)	1778
BsrBI	CCGCTC	2 cut(s)	1987, 2728
BsrDI	GCAATG	2 cut(s)	138, 1350
BsrFI	RCCGGY	1 cut(s)	2594
BsrGI	TGTACA	2 cut(s)	704, 2791
BsrI	ACTGG	5 cut(s)	558, 898, 1174, 2034, 2633
BssAI	RCCGGY	1 cut(s)	2594
BssECI	CCNNGG	7 cut(s)	792, 877, 1076, 1102, 1483, 1822, 2514
BssT1I	CCWWGG	4 cut(s)	792, 1102, 1483, 2514
Bst2UI	CCWGG	7 cut(s)	552, 879, 1078, 1561, 1818, 1954, 2178
Bst4CI	ACNGT	6 cut(s)	147, 273, 512, 1124, 1243, 2012
Bst6I	CTCTTC	4 cut(s)	92, 648, 1333, 2446
BstAPI	GCANNNNNTGC	2 cut(s)	308, 1671
BstAUI	TGTACA	2 cut(s)	704, 2791
BstBAI	YACGTR	1 cut(s)	1284
BstDEI	CTNAG	8 cut(s)	385, 1042, 1189, 1688, 1877, 2065, 2122, 2534
BstDSI	CCRYGG	4 cut(s)	792, 1102, 1483, 1822
BstENI	CCTNNNNNAGG	1 cut(s)	826
BstF5I	GGATG	5 cut(s)	176, 785, 1529, 1992, 2524
BstFNI	CGCG	2 cut(s)	381, 2235
BstHHI	GCGC	2 cut(s)	383, 2235
BstMAI	GTCTC	2 cut(s)	733, 1579
BstNI	CCWGG	7 cut(s)	552, 879, 1078, 1561, 1818, 1954, 2178
BstNSI	RCATGY	8 cut(s)	468, 761, 1662, 1761, 1802, 1892, 2412, 2463
BstSCI	CCNGG	8 cut(s)	457, 550, 877, 1076, 1559, 1816, 1952, 2176
BstSFI	CTRYAG	4 cut(s)	674, 1120, 1663, 2239
BstSLI	GKGCMC	1 cut(s)	1166
BstUI	CGCG	2 cut(s)	381, 2235
BstV1I	GCAGC	7 cut(s)	1649, 1917, 2225, 2445, 2484, 2579, 2729
BstV2I	GAAGAC	5 cut(s)	823, 940, 1801, 2160, 2383
BstX2I	RGATCY	5 cut(s)	258, 290, 678, 1873, 2141
BstXI	CCANNNNNNTGG	1 cut(s)	368
BstYI	RGATCY	5 cut(s)	258, 290, 678, 1873, 2141
Bsu36I	CCTNAGG	2 cut(s)	385, 2534
BsuRI	GGCC	8 cut(s)	446, 918, 1215, 1652, 1821, 2033, 2333, 2677
BtgI	CCRYGG	4 cut(s)	792, 1102, 1483, 1822
BtgZI	GCGATG	1 cut(s)	2430
BtsCI	GGATG	5 cut(s)	176, 785, 1529, 1992, 2524
BtsI	GCAGTG	3 cut(s)	232, 1672, 2623
BtsIMutI	CAGTG	5 cut(s)	232, 1672, 2017, 2362, 2623
BveI	ACCTGC	2 cut(s)	1713, 2114
CaiI	CAGNNNCTG	4 cut(s)	1083, 1671, 1920, 2121
CciI	TCATGA	2 cut(s)	1154, 1786
CfoI	GCGC	2 cut(s)	383, 2235
Cfr10I	RCCGGY	1 cut(s)	2594
Cfr13I	GGNCC	4 cut(s)	147, 445, 917, 2032
CpoI	CGGWCCG	1 cut(s)	147
CseI	GACGC	4 cut(s)	387, 1434, 1926, 2109
CsiI	ACCWGGT	1 cut(s)	1559
Csp6I	GTAC	4 cut(s)	705, 2221, 2749, 2792
CspAI	ACCGGT	1 cut(s)	2594
CspCI	CAANNNNNGTGG	2 cut(s)	2182, 2217
CspI	CGGWCCG	1 cut(s)	147
CviQI	GTAC	4 cut(s)	705, 2221, 2749, 2792
DdeI	CTNAG	8 cut(s)	385, 1042, 1189, 1688, 1877, 2065, 2122, 2534
DraIII	CACNNNGTG	2 cut(s)	357, 1563
EaeI	YGGCCR	1 cut(s)	2675
Eam1104I	CTCTTC	4 cut(s)	92, 648, 1333, 2446
EarI	CTCTTC	4 cut(s)	92, 648, 1333, 2446
EciI	GGCGGA	1 cut(s)	676
Ecl136II	GAGCTC	1 cut(s)	874
Eco130I	CCWWGG	4 cut(s)	792, 1102, 1483, 2514
Eco147I	AGGCCT	2 cut(s)	1652, 2333
Eco24I	GRGCYC	1 cut(s)	876
Eco47I	GGWCC	1 cut(s)	147
Eco53kI	GAGCTC	1 cut(s)	874
Eco57I	CTGAAG	4 cut(s)	835, 1867, 2213, 2497
Eco81I	CCTNAGG	2 cut(s)	385, 2534
Eco88I	CYCGRG	2 cut(s)	2038, 2205
EcoICRI	GAGCTC	1 cut(s)	874
EcoNI	CCTNNNNNAGG	1 cut(s)	826
EcoRII	CCWGG	7 cut(s)	550, 877, 1076, 1559, 1816, 1952, 2176
EcoT14I	CCWWGG	4 cut(s)	792, 1102, 1483, 2514
EcoT22I	ATGCAT	6 cut(s)	574, 640, 1022, 1434, 1759, 1804
EcoT38I	GRGCYC	1 cut(s)	876
ErhI	CCWWGG	4 cut(s)	792, 1102, 1483, 2514
Esp3I	CGTCTC	1 cut(s)	733
FalI	AAGNNNNNCTT	2 cut(s)	1134, 1166
FaqI	GGGAC	1 cut(s)	441
FauI	CCCGC	1 cut(s)	455
FauNDI	CATATG	2 cut(s)	1417, 2796
FbaI	TGATCA	1 cut(s)	536
FokI	GGATG	5 cut(s)	183, 792, 1536, 1979, 2531
FriOI	GRGCYC	1 cut(s)	876
FspBI	CTAG	7 cut(s)	391, 475, 520, 994, 1501, 1648, 2775
GlaI	GCGC	2 cut(s)	382, 2234
GsuI	CTGGAG	4 cut(s)	757, 900, 1800, 1975
HaeIII	GGCC	8 cut(s)	446, 918, 1215, 1652, 1821, 2033, 2333, 2677
HapII	CCGG	2 cut(s)	459, 2595
HgaI	GACGC	4 cut(s)	387, 1434, 1926, 2109
HhaI	GCGC	2 cut(s)	383, 2235
Hin6I	GCGC	2 cut(s)	381, 2233
HinP1I	GCGC	2 cut(s)	381, 2233
HindIII	AAGCTT	2 cut(s)	396, 481
HpaII	CCGG	2 cut(s)	459, 2595
HphI	GGTGA	5 cut(s)	765, 898, 1575, 1728, 1848
Hpy166II	GTNNAC	3 cut(s)	1164, 1390, 2614
Hpy8I	GTNNAC	3 cut(s)	1164, 1390, 2614
Hpy99I	CGWCG	3 cut(s)	51, 54, 147
HpyAV	CCTTC	4 cut(s)	573, 693, 1696, 2237
HpyCH4III	ACNGT	6 cut(s)	147, 273, 512, 1124, 1243, 2012
HpyCH4IV	ACGT	1 cut(s)	1283
HpyF3I	CTNAG	8 cut(s)	385, 1042, 1189, 1688, 1877, 2065, 2122, 2534
HpySE526I	ACGT	1 cut(s)	1283
HspAI	GCGC	2 cut(s)	381, 2233
Ksp22I	TGATCA	1 cut(s)	536
LmnI	GCTCC	4 cut(s)	353, 879, 1819, 2535
Lsp1109I	GCAGC	7 cut(s)	1649, 1917, 2225, 2445, 2484, 2579, 2729
LweI	GCATC	6 cut(s)	161, 647, 707, 1007, 1441, 1720
MabI	ACCWGGT	1 cut(s)	1559
MaeI	CTAG	7 cut(s)	391, 475, 520, 994, 1501, 1648, 2775
MaeII	ACGT	1 cut(s)	1283
MaeIII	GTNAC	8 cut(s)	234, 725, 753, 1342, 1836, 1973, 2490, 2576
MbiI	CCGCTC	2 cut(s)	1987, 2728
MfeI	CAATTG	3 cut(s)	415, 1378, 1449
MflI	RGATCY	5 cut(s)	258, 290, 678, 1873, 2141
MhlI	GDGCHC	4 cut(s)	876, 1141, 1166, 1195
MlyI	GAGTC	6 cut(s)	1350, 1533, 1611, 1833, 2174, 2252
MmeI	TCCRAC	1 cut(s)	1457
Mph1103I	ATGCAT	6 cut(s)	574, 640, 1022, 1434, 1759, 1804
MroXI	GAANNNNTTC	3 cut(s)	1150, 1462, 1706
MseI	TTAA	6 cut(s)	205, 402, 957, 1359, 1846, 2849
MslI	CAYNNNNRTG	3 cut(s)	67, 1159, 1395
MspA1I	CMGCKG	3 cut(s)	364, 1001, 1713
MspI	CCGG	2 cut(s)	459, 2595
MspR9I	CCNGG	8 cut(s)	459, 552, 879, 1078, 1561, 1818, 1954, 2178
MunI	CAATTG	3 cut(s)	415, 1378, 1449
Mva1269I	GAATGC	5 cut(s)	493, 1253, 1759, 1896, 1946
MvaI	CCWGG	7 cut(s)	552, 879, 1078, 1561, 1818, 1954, 2178
MvnI	CGCG	2 cut(s)	381, 2235
NciI	CCSGG	1 cut(s)	459
NcoI	CCATGG	3 cut(s)	792, 1102, 1483
NdeI	CATATG	2 cut(s)	1417, 2796
NheI	GCTAGC	2 cut(s)	390, 993
NlaIV	GGNNCC	8 cut(s)	292, 556, 1481, 1780, 1815, 2034, 2143, 2804
NmuCI	GTSAC	4 cut(s)	753, 1342, 1836, 2490
NsiI	ATGCAT	6 cut(s)	574, 640, 1022, 1434, 1759, 1804
NspI	RCATGY	8 cut(s)	468, 761, 1662, 1761, 1802, 1892, 2412, 2463
OliI	CACNNNNGTG	1 cut(s)	1395
PaeI	GCATGC	2 cut(s)	1761, 2463
PaeR7I	CTCGAG	2 cut(s)	2038, 2205
PagI	TCATGA	2 cut(s)	1154, 1786
PaqCI	CACCTGC	1 cut(s)	2114
PceI	AGGCCT	2 cut(s)	1652, 2333
PciI	ACATGT	2 cut(s)	1888, 2408
PctI	GAATGC	5 cut(s)	493, 1253, 1759, 1896, 1946
PdmI	GAANNNNTTC	3 cut(s)	1150, 1462, 1706
PfeI	GAWTC	5 cut(s)	9, 732, 963, 1227, 2252
PflMI	CCANNNNNTGG	2 cut(s)	1371, 1823
PfoI	TCCNGGA	1 cut(s)	1952
PinAI	ACCGGT	1 cut(s)	2594
PleI	GAGTC	6 cut(s)	1349, 1533, 1611, 1833, 2173, 2252
PpsI	GAGTC	6 cut(s)	1349, 1533, 1611, 1833, 2173, 2252
Ppu21I	YACGTR	1 cut(s)	1284
PscI	ACATGT	2 cut(s)	1888, 2408
PsiI	TTATAA	1 cut(s)	199
Psp124BI	GAGCTC	1 cut(s)	876
Psp6I	CCWGG	7 cut(s)	550, 877, 1076, 1559, 1816, 1952, 2176
PspGI	CCWGG	7 cut(s)	550, 877, 1076, 1559, 1816, 1952, 2176
PspN4I	GGNNCC	8 cut(s)	292, 556, 1481, 1780, 1815, 2034, 2143, 2804
PspPI	GGNCC	4 cut(s)	147, 445, 917, 2032
PspXI	VCTCGAGB	2 cut(s)	2038, 2205
PstI	CTGCAG	2 cut(s)	1667, 2243
PstNI	CAGNNNCTG	4 cut(s)	1083, 1671, 1920, 2121
PsuI	RGATCY	5 cut(s)	258, 290, 678, 1873, 2141
PvuII	CAGCTG	2 cut(s)	1001, 1713
RsaI	GTAC	4 cut(s)	706, 2222, 2750, 2793
RsaNI	GTAC	4 cut(s)	705, 2221, 2749, 2792
RseI	CAYNNNNRTG	3 cut(s)	67, 1159, 1395
Rsr2I	CGGWCCG	1 cut(s)	147
RsrII	CGGWCCG	1 cut(s)	147
SacI	GAGCTC	1 cut(s)	876
SaqAI	TTAA	6 cut(s)	205, 402, 957, 1359, 1846, 2849
Sau96I	GGNCC	4 cut(s)	147, 445, 917, 2032
SchI	GAGTC	6 cut(s)	1350, 1533, 1611, 1833, 2174, 2252
ScrFI	CCNGG	8 cut(s)	459, 552, 879, 1078, 1561, 1818, 1954, 2178
SduI	GDGCHC	4 cut(s)	876, 1141, 1166, 1195
SexAI	ACCWGGT	1 cut(s)	1559
SfaNI	GCATC	6 cut(s)	161, 647, 707, 1007, 1441, 1720
SfcI	CTRYAG	4 cut(s)	674, 1120, 1663, 2239
Sfr274I	CTCGAG	2 cut(s)	2038, 2205
SinI	GGWCC	1 cut(s)	147
SlaI	CTCGAG	2 cut(s)	2038, 2205
SmiMI	CAYNNNNRTG	3 cut(s)	67, 1159, 1395
SmlI	CTYRAG	4 cut(s)	1140, 2038, 2205, 2690
SmoI	CTYRAG	4 cut(s)	1140, 2038, 2205, 2690
SphI	GCATGC	2 cut(s)	1761, 2463
SseBI	AGGCCT	2 cut(s)	1652, 2333
SspI	AATATT	1 cut(s)	2485
SspMI	CTAG	7 cut(s)	391, 475, 520, 994, 1501, 1648, 2775
SstI	GAGCTC	1 cut(s)	876
StuI	AGGCCT	2 cut(s)	1652, 2333
StyD4I	CCNGG	8 cut(s)	457, 550, 877, 1076, 1559, 1816, 1952, 2176
StyI	CCWWGG	4 cut(s)	792, 1102, 1483, 2514
TaaI	ACNGT	6 cut(s)	147, 273, 512, 1124, 1243, 2012
TaiI	ACGT	1 cut(s)	1286
TaqI	TCGA	7 cut(s)	868, 1205, 1316, 1435, 2039, 2206, 2296
TatI	WGTACW	3 cut(s)	704, 2220, 2791
TauI	GCSGC	4 cut(s)	1218, 2048, 2135, 2238
TfiI	GAWTC	5 cut(s)	9, 732, 963, 1227, 2252
Tru1I	TTAA	6 cut(s)	205, 402, 957, 1359, 1846, 2849
Tru9I	TTAA	6 cut(s)	205, 402, 957, 1359, 1846, 2849
TscAI	CASTG	5 cut(s)	232, 1672, 2017, 2369, 2630
TseFI	GTSAC	4 cut(s)	753, 1342, 1836, 2490
TseI	GCWGC	7 cut(s)	1662, 1905, 2238, 2433, 2497, 2567, 2742
Tsp45I	GTSAC	4 cut(s)	753, 1342, 1836, 2490
TspGWI	ACGGA	2 cut(s)	2478, 2808
TspRI	CASTG	5 cut(s)	232, 1672, 2017, 2369, 2630
Van91I	CCANNNNNTGG	2 cut(s)	1371, 1823
VneI	GTGCAC	1 cut(s)	1162
VpaK11BI	GGWCC	1 cut(s)	147
XagI	CCTNNNNNAGG	1 cut(s)	826
XapI	RAATTY	4 cut(s)	606, 899, 1461, 2075
XceI	RCATGY	8 cut(s)	468, 761, 1662, 1761, 1802, 1892, 2412, 2463
XcmI	CCANNNNNNNNNTGG	1 cut(s)	799
XhoI	CTCGAG	2 cut(s)	2038, 2205
XmnI	GAANNNNTTC	3 cut(s)	1150, 1462, 1706
XspI	CTAG	7 cut(s)	391, 475, 520, 994, 1501, 1648, 2775
Zsp2I	ATGCAT	6 cut(s)	574, 640, 1022, 1434, 1759, 1804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.