Rmu_sc0006582.1_g000013

polyadenylate-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006582.1
OG0010442
Physical Location & Seq
Reverse (-)
76387 .. 80776
4390 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2040 bp
atggatcccggaacgaacccaacaaatgggaaatcacgccttttcgtttccacctcgacctatcatggccgtggattcctgatcgctgacgtggcatcaccaaatggcatctgtactgaagcgtcaccccacgcgtgggtagtgagcgcgtgggaagggcccacgcggactccggcgacggcgctcgccgtgatggcgtctctgtacgtcggagacctcagcccctacatcaccgagaccgaactctacgaggcgttcgaaaacgagaaaaagacccttgcgtccgttagggtgtgcagggacaccaacaccggccggtctctctgctacggctacgccaacttttctagcaccgacgacgccattcaactgaagaataactcttttctgcatggaagagtgatgagggtcatgtggtctcatcgtgatccagatgccaggagaagtggaattgggaatgtgtttgtcaagaacttgagtgaagggattgataatgtagggctccacgatatgtttaggaaatttggaaatgttttgtcttgcaaagttgccatgtttgaggatgggaagagtaaaggctatggctttgttcagtttgagtctgaggaatcagcaattgctgctattgacaagctaaatggctctacagtcagagacaaacaattgtatgtcgcaaagtttgttagaaagagtgatcgagttttgcccaatcctgatgtgaaatatacaaatttgtatgtgaagaatttggatccaaatgtcggggaagagcttctggaagaaaagttctctgagttcgggaaaattataagctttgcaatagcaagggatgaaaatggaatttctagaggttttggctttgtgaactttgagagcccggatgatgctagaaaagcattggaatctctgaatggaactcaacttggttccaaggttctgtatgtagcgagagcacagaagaaggcagagcgtgaacacattttgcgtcgtcagtttgaggaaaaacggaaggagcaaatgttaaaattcaagggatcaaacgtgtatgtgaagaacattgatgatgatgtcactgatgaagagctcatagaccacttcagtcaatgtggcacgattacttctgcaaaaattatgagagatgagaaaggaataagcaagggctttggttttgtttgcttctctacccccgaggagggcaataaagctgtgattacatttcatggatatatgtttcatcggaagccattgtatgtcgctattgctcaaaggaaagaagaaagacaagcacagctgcaacttcagtatgcacagcgtatggcaggatttgctggtccttcaacagctgtcatccctggtggataccctcctatctactatcaggctccatctggtgttgttccaccagtgcctcctcgaccagggatgatgtatcagcctttgggattgaggccaggatggagacctaatggctttgcacctacctctggaccaggttatcaaccaccacctgttcctgttatgtccaatactccaaggcagcataggcaaaacagaggcagaataaatgggcatatgcttcctcagggaggtccatttattccacatttgcaacagtcaactcactcctcgaaggagtcaaacaatcagcagcctaagtatgctcctaatgggcgtcaacgtgacatgaataaaggatcaggagtctcatctactgcttccaattctgttggaggtgggtctcagggaccagagatgctgagtagtatgcttgctgctgcttctcctgagcagcagaaacagatacttggcgagcgtctcttcccactagttcaaacacacaagccggatcttgcttcaaaaattaccgggatgctgctggagatggacaactcagaactgctgcttttgttggagtctcctgagagtttggctgccaaagtgggagaagctgttcaggtcctcaagatctcgaagactaaagtatctagcaaagattcccttcattctagttacctttctgctgaggttgcagtcaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03018 map03013 map03015 map03018
Pfam Domains
Protein Families
PABP RRM_1

Protein Analysis

679

Amino Acids

74.82

Weight (kDa)

9.0

Isoelectric Point (pI)

37.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 68 - 133 5.2e-09 RNA recognition motif
RRM_1 PF00076 154 - 222 6.4e-20 RNA recognition motif
RRM_1 PF00076 245 - 313 2.7e-22 RNA recognition motif
RRM_1 PF00076 348 - 416 9.1e-17 RNA recognition motif
MLLE PF00658 589 - 654 5.4e-30 MLLE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 809
AasI GACNNNNNNGTC 1 cut(s) 280
AccB7I CCANNNNNTGG 1 cut(s) 26
AccII CGCG 3 cut(s) 134, 149, 166
AciI CCGC 1 cut(s) 166
AclWI GGATC 7 cut(s) 12, 422, 746, 759, 1042, 1702, 1854
AcoI YGGCCR 2 cut(s) 67, 313
AcsI RAATTY 5 cut(s) 521, 730, 745, 840, 1025
AcuI CTGAAG 4 cut(s) 138, 392, 1081, 1283
AcyI GRCGYC 3 cut(s) 197, 360, 1672
AfaI GTAC 2 cut(s) 115, 206
AfiI CCNNNNNNNGG 9 cut(s) 26, 135, 136, 761, 1192, 1193, 1418, 1484, 1586
AflIII ACRYGT 2 cut(s) 132, 1041
AgsI TTSAA 5 cut(s) 368, 1030, 1338, 1832, 1857
AhlI ACTAGT 1 cut(s) 1825
AjiI CACGTC 1 cut(s) 91
AjnI CCWGG 5 cut(s) 437, 1351, 1417, 1450, 1489
AloI GAACNNNNNNTCC 4 cut(s) 770, 802, 1935, 1967
AluBI AGCT 8 cut(s) 634, 772, 813, 1084, 1205, 1291, 1343, 1949
AluI AGCT 8 cut(s) 634, 772, 813, 1084, 1205, 1291, 1343, 1949
Alw21I GWGCWC 2 cut(s) 955, 1086
AlwI GGATC 7 cut(s) 12, 422, 746, 759, 1042, 1702, 1854
Ama87I CYCGRG 1 cut(s) 1187
AoxI GGCC 4 cut(s) 67, 158, 313, 1448
ApaI GGGCCC 1 cut(s) 162
ApoI RAATTY 5 cut(s) 521, 730, 745, 840, 1025
Asp700I GAANNNNTTC 2 cut(s) 771, 1950
AspLEI GCGC 2 cut(s) 149, 184
AspS9I GGNCC 7 cut(s) 158, 159, 1331, 1487, 1589, 1745, 1957
AsuC2I CCSGG 3 cut(s) 9, 878, 1867
AsuHPI GGTGA 3 cut(s) 90, 117, 223
AsuII TTCGAA 1 cut(s) 258
AvaI CYCGRG 1 cut(s) 1187
AvaII GGWCC 5 cut(s) 1331, 1487, 1589, 1745, 1957
AxyI CCTNAGG 1 cut(s) 1581
BaeGI GKGCMC 1 cut(s) 162
BaeI ACNNNNGTAYC 2 cut(s) 1965, 1998
BamHI GGATCC 2 cut(s) 4, 751
BanII GRGCYC 4 cut(s) 162, 504, 878, 1086
BbsI GAAGAC 1 cut(s) 1979
Bbv12I GWGCWC 2 cut(s) 955, 1086
BbvCI CCTCAGC 2 cut(s) 218, 2022
BccI CCATC 5 cut(s) 187, 557, 1393, 1449, 1876
BceAI ACGGC 4 cut(s) 54, 173, 195, 346
BciT130I CCWGG 5 cut(s) 439, 1353, 1419, 1452, 1491
BciVI GTATCC 1 cut(s) 1352
BcnI CCSGG 3 cut(s) 9, 878, 1867
BcuI ACTAGT 1 cut(s) 1825
BfaI CTAG 6 cut(s) 348, 846, 888, 1826, 1986, 2007
BfmI CTRYAG 1 cut(s) 645
BfoI RGCGCY 1 cut(s) 185
BfuI GTATCC 1 cut(s) 1352
BglI GCCNNNNNGGC 1 cut(s) 194
BglII AGATCT 1 cut(s) 1965
Bme1390I CCNGG 8 cut(s) 9, 439, 878, 1353, 1419, 1452, 1491, 1867
Bme18I GGWCC 5 cut(s) 1331, 1487, 1589, 1745, 1957
BmeT110I CYCGRG 1 cut(s) 1187
BmgBI CACGTC 1 cut(s) 91
BmgT120I GGNCC 7 cut(s) 158, 159, 1331, 1487, 1589, 1745, 1957
BmiI GGNNCC 7 cut(s) 6, 160, 503, 753, 928, 1383, 1746
BmrFI CCNGG 8 cut(s) 9, 439, 878, 1353, 1419, 1452, 1491, 1867
BmsI GCATC 6 cut(s) 104, 117, 424, 874, 1743, 1860
BpiI GAAGAC 1 cut(s) 1979
BpmI CTGGAG 1 cut(s) 1898
Bpu10I CCTNAGC 3 cut(s) 218, 1785, 2022
Bpu14I TTCGAA 1 cut(s) 258
BpuEI CTTGAG 2 cut(s) 496, 1946
BpuMI CCSGG 3 cut(s) 9, 878, 1867
BsaHI GRCGYC 3 cut(s) 197, 360, 1672
BsaI GGTCTC 6 cut(s) 207, 230, 324, 423, 1453, 1743
BsaJI CCNNGG 6 cut(s) 70, 930, 1188, 1351, 1418, 1532
BsaXI ACNNNNNCTCC 6 cut(s) 154, 184, 1004, 1034, 1935, 1965
Bsc4I CCNNNNNNNGG 9 cut(s) 26, 135, 136, 761, 1192, 1193, 1418, 1484, 1586
Bse118I RCCGGY 2 cut(s) 311, 315
Bse1I ACTGG 1 cut(s) 1403
Bse21I CCTNAGG 1 cut(s) 1581
BseBI CCWGG 5 cut(s) 439, 1353, 1419, 1452, 1491
BseDI CCNNGG 6 cut(s) 70, 930, 1188, 1351, 1418, 1532
BseGI GGATG 7 cut(s) 568, 835, 886, 1347, 1428, 1460, 1875
BseLI CCNNNNNNNGG 9 cut(s) 26, 135, 136, 761, 1192, 1193, 1418, 1484, 1586
BseNI ACTGG 1 cut(s) 1403
BseRI GAGGAG 3 cut(s) 1205, 1401, 1615
BseSI GKGCMC 1 cut(s) 162
BseX3I CGGCCG 1 cut(s) 313
BsgI GTGCAG 1 cut(s) 316
Bsh1236I CGCG 3 cut(s) 134, 149, 166
Bsh1285I CGRYCG 1 cut(s) 316
BshFI GGCC 4 cut(s) 69, 160, 315, 1450
BsiEI CGRYCG 1 cut(s) 316
BsiHKAI GWGCWC 2 cut(s) 955, 1086
BsiHKCI CYCGRG 1 cut(s) 1187
BsiSI CCGG 7 cut(s) 9, 173, 312, 316, 878, 1844, 1866
BslFI GGGAC 2 cut(s) 314, 1758
BslI CCNNNNNNNGG 9 cut(s) 26, 135, 136, 761, 1192, 1193, 1418, 1484, 1586
BsmBI CGTCTC 2 cut(s) 204, 1820
BsmFI GGGAC 2 cut(s) 314, 1758
BsnI GGCC 4 cut(s) 69, 160, 315, 1450
Bso31I GGTCTC 6 cut(s) 207, 230, 324, 423, 1453, 1743
BsoBI CYCGRG 1 cut(s) 1187
Bsp119I TTCGAA 1 cut(s) 258
Bsp120I GGGCCC 1 cut(s) 158
Bsp1286I GDGCHC 5 cut(s) 162, 504, 878, 955, 1086
Bsp143I GATC 9 cut(s) 4, 81, 427, 694, 751, 1034, 1694, 1846, 1965
BspACI CCGC 1 cut(s) 166
BspANI GGCC 4 cut(s) 69, 160, 315, 1450
BspFNI CGCG 3 cut(s) 134, 149, 166
BspLI GGNNCC 7 cut(s) 6, 160, 503, 753, 928, 1383, 1746
BspPI GGATC 7 cut(s) 12, 422, 746, 759, 1042, 1702, 1854
BspQI GCTCTTC 2 cut(s) 762, 1074
BspT104I TTCGAA 1 cut(s) 258
BspTNI GGTCTC 6 cut(s) 207, 230, 324, 423, 1453, 1743
BsrFI RCCGGY 2 cut(s) 311, 315
BsrI ACTGG 1 cut(s) 1403
BssAI RCCGGY 2 cut(s) 311, 315
BssECI CCNNGG 6 cut(s) 70, 930, 1188, 1351, 1418, 1532
BssMI GATC 9 cut(s) 4, 81, 427, 694, 751, 1034, 1694, 1846, 1965
BssNI GRCGYC 3 cut(s) 197, 360, 1672
BssT1I CCWWGG 2 cut(s) 930, 1532
Bst2UI CCWGG 5 cut(s) 439, 1353, 1419, 1452, 1491
Bst4CI ACNGT 2 cut(s) 649, 1614
Bst6I CTCTTC 5 cut(s) 391, 563, 762, 1074, 1823
BstACI GRCGYC 3 cut(s) 197, 360, 1672
BstAPI GCANNNNNTGC 2 cut(s) 620, 1325
BstBI TTCGAA 1 cut(s) 258
BstC8I GCNNGC 3 cut(s) 186, 1770, 1811
BstDSI CCRYGG 1 cut(s) 70
BstENI CCTNNNNNAGG 2 cut(s) 1416, 1584
BstF5I GGATG 7 cut(s) 568, 835, 886, 1347, 1428, 1460, 1875
BstFNI CGCG 3 cut(s) 134, 149, 166
BstH2I RGCGCY 1 cut(s) 185
BstHHI GCGC 2 cut(s) 149, 184
BstKTI GATC 9 cut(s) 7, 84, 430, 697, 754, 1037, 1697, 1849, 1968
BstMBI GATC 9 cut(s) 4, 81, 427, 694, 751, 1034, 1694, 1846, 1965
BstMCI CGRYCG 1 cut(s) 316
BstMWI GCNNNNNNNGC 7 cut(s) 92, 194, 620, 893, 1325, 1543, 2027
BstNI CCWGG 5 cut(s) 439, 1353, 1419, 1452, 1491
BstSCI CCNGG 8 cut(s) 7, 437, 876, 1351, 1417, 1450, 1489, 1865
BstSFI CTRYAG 1 cut(s) 645
BstSLI GKGCMC 1 cut(s) 162
BstUI CGCG 3 cut(s) 134, 149, 166
BstV2I GAAGAC 1 cut(s) 1979
BstX2I RGATCY 4 cut(s) 4, 751, 1846, 1965
BstYI RGATCY 4 cut(s) 4, 751, 1846, 1965
BstZI CGGCCG 1 cut(s) 313
Bsu36I CCTNAGG 1 cut(s) 1581
BsuI GTATCC 1 cut(s) 1352
BsuRI GGCC 4 cut(s) 69, 160, 315, 1450
BtgI CCRYGG 1 cut(s) 70
BtrI CACGTC 1 cut(s) 91
BtsCI GGATG 7 cut(s) 568, 835, 886, 1347, 1428, 1460, 1875
BtsIMutI CAGTG 2 cut(s) 1071, 1410
Cac8I GCNNGC 3 cut(s) 186, 1770, 1811
CfoI GCGC 2 cut(s) 149, 184
Cfr10I RCCGGY 2 cut(s) 311, 315
Cfr13I GGNCC 7 cut(s) 158, 159, 1331, 1487, 1589, 1745, 1957
CseI GACGC 7 cut(s) 111, 186, 270, 368, 974, 1661, 1802
CsiI ACCWGGT 1 cut(s) 1489
Csp6I GTAC 2 cut(s) 114, 205
CviAII CATG 6 cut(s) 65, 392, 412, 553, 1220, 1684
CviQI GTAC 2 cut(s) 114, 205
DpnI GATC 9 cut(s) 6, 83, 429, 696, 753, 1036, 1696, 1848, 1967
DpnII GATC 9 cut(s) 4, 81, 427, 694, 751, 1034, 1694, 1846, 1965
DrdI GACNNNNNNGTC 1 cut(s) 280
DseDI GACNNNNNNGTC 1 cut(s) 280
EaeI YGGCCR 2 cut(s) 67, 313
EagI CGGCCG 1 cut(s) 313
Eam1104I CTCTTC 5 cut(s) 391, 563, 762, 1074, 1823
EarI CTCTTC 5 cut(s) 391, 563, 762, 1074, 1823
Ecl136II GAGCTC 1 cut(s) 1084
EclXI CGGCCG 1 cut(s) 313
Eco130I CCWWGG 2 cut(s) 930, 1532
Eco24I GRGCYC 4 cut(s) 162, 504, 878, 1086
Eco31I GGTCTC 6 cut(s) 207, 230, 324, 423, 1453, 1743
Eco47I GGWCC 5 cut(s) 1331, 1487, 1589, 1745, 1957
Eco52I CGGCCG 1 cut(s) 313
Eco53kI GAGCTC 1 cut(s) 1084
Eco57I CTGAAG 4 cut(s) 138, 392, 1081, 1283
Eco81I CCTNAGG 1 cut(s) 1581
Eco88I CYCGRG 1 cut(s) 1187
EcoICRI GAGCTC 1 cut(s) 1084
EcoNI CCTNNNNNAGG 2 cut(s) 1416, 1584
EcoO109I RGGNCCY 2 cut(s) 158, 1957
EcoRII CCWGG 5 cut(s) 437, 1351, 1417, 1450, 1489
EcoT14I CCWWGG 2 cut(s) 930, 1532
EcoT38I GRGCYC 4 cut(s) 162, 504, 878, 1086
ErhI CCWWGG 2 cut(s) 930, 1532
Esp3I CGTCTC 2 cut(s) 204, 1820
FaeI CATG 6 cut(s) 68, 395, 415, 556, 1223, 1687
FalI AAGNNNNNCTT 2 cut(s) 1983, 2015
FaqI GGGAC 2 cut(s) 314, 1758
FatI CATG 6 cut(s) 64, 391, 411, 552, 1219, 1683
FauNDI CATATG 1 cut(s) 1572
FokI GGATG 7 cut(s) 575, 842, 893, 1334, 1435, 1467, 1882
FriOI GRGCYC 4 cut(s) 162, 504, 878, 1086
FspBI CTAG 6 cut(s) 348, 846, 888, 1826, 1986, 2007
GlaI GCGC 2 cut(s) 148, 183
GsuI CTGGAG 1 cut(s) 1898
HaeII RGCGCY 1 cut(s) 185
HaeIII GGCC 4 cut(s) 69, 160, 315, 1450
HapII CCGG 7 cut(s) 9, 173, 312, 316, 878, 1844, 1866
HgaI GACGC 7 cut(s) 111, 186, 270, 368, 974, 1661, 1802
HhaI GCGC 2 cut(s) 149, 184
Hin1I GRCGYC 3 cut(s) 197, 360, 1672
Hin1II CATG 6 cut(s) 68, 395, 415, 556, 1223, 1687
Hin6I GCGC 2 cut(s) 147, 182
HinP1I GCGC 2 cut(s) 147, 182
HincII GTYRAC 2 cut(s) 1617, 1676
HindII GTYRAC 2 cut(s) 1617, 1676
HindIII AAGCTT 1 cut(s) 811
HinfI GANTC 9 cut(s) 75, 169, 599, 608, 902, 1634, 1701, 1913, 1994
HpaII CCGG 7 cut(s) 9, 173, 312, 316, 878, 1844, 1866
HphI GGTGA 3 cut(s) 90, 117, 223
Hpy166II GTNNAC 4 cut(s) 865, 974, 1617, 1676
Hpy188I TCNGA 7 cut(s) 212, 604, 653, 793, 909, 1239, 1894
Hpy8I GTNNAC 4 cut(s) 865, 974, 1617, 1676
Hpy99I CGWCG 5 cut(s) 181, 212, 359, 362, 990
HpyAV CCTTC 7 cut(s) 149, 476, 955, 1003, 1344, 1624, 2009
HpyCH4III ACNGT 2 cut(s) 649, 1614
HpyCH4IV ACGT 4 cut(s) 90, 207, 1041, 1678
HpyF10VI GCNNNNNNNGC 7 cut(s) 92, 194, 620, 893, 1325, 1543, 2027
HpySE526I ACGT 4 cut(s) 90, 207, 1041, 1678
Hsp92I GRCGYC 3 cut(s) 197, 360, 1672
Hsp92II CATG 6 cut(s) 68, 395, 415, 556, 1223, 1687
HspAI GCGC 2 cut(s) 147, 182
Kzo9I GATC 9 cut(s) 4, 81, 427, 694, 751, 1034, 1694, 1846, 1965
LguI GCTCTTC 2 cut(s) 762, 1074
LmnI GCTCC 4 cut(s) 507, 1012, 1387, 1666
LweI GCATC 6 cut(s) 104, 117, 424, 874, 1743, 1860
MabI ACCWGGT 1 cut(s) 1489
MaeI CTAG 6 cut(s) 348, 846, 888, 1826, 1986, 2007
MaeII ACGT 4 cut(s) 90, 207, 1041, 1678
MaeIII GTNAC 4 cut(s) 123, 1069, 1679, 2009
MalI GATC 9 cut(s) 6, 83, 429, 696, 753, 1036, 1696, 1848, 1967
MboI GATC 9 cut(s) 4, 81, 427, 694, 751, 1034, 1694, 1846, 1965
MfeI CAATTG 3 cut(s) 615, 662, 2035
MflI RGATCY 4 cut(s) 4, 751, 1846, 1965
MhlI GDGCHC 5 cut(s) 162, 504, 878, 955, 1086
MluI ACGCGT 1 cut(s) 132
MlyI GAGTC 5 cut(s) 163, 608, 1643, 1710, 1922
MmeI TCCRAC 3 cut(s) 190, 1708, 1890
MroXI GAANNNNTTC 2 cut(s) 771, 1950
MseI TTAA 1 cut(s) 1022
MslI CAYNNNNRTG 1 cut(s) 69
MspA1I CMGCKG 2 cut(s) 1291, 1343
MspI CCGG 7 cut(s) 9, 173, 312, 316, 878, 1844, 1866
MspR9I CCNGG 8 cut(s) 9, 439, 878, 1353, 1419, 1452, 1491, 1867
MunI CAATTG 3 cut(s) 615, 662, 2035
MvaI CCWGG 5 cut(s) 439, 1353, 1419, 1452, 1491
MvnI CGCG 3 cut(s) 134, 149, 166
MwoI GCNNNNNNNGC 7 cut(s) 92, 194, 620, 893, 1325, 1543, 2027
NciI CCSGG 3 cut(s) 9, 878, 1867
NdeI CATATG 1 cut(s) 1572
NdeII GATC 9 cut(s) 4, 81, 427, 694, 751, 1034, 1694, 1846, 1965
NlaIII CATG 6 cut(s) 68, 395, 415, 556, 1223, 1687
NlaIV GGNNCC 7 cut(s) 6, 160, 503, 753, 928, 1383, 1746
NmuCI GTSAC 3 cut(s) 123, 1069, 1679
NspV TTCGAA 1 cut(s) 258
PciSI GCTCTTC 2 cut(s) 762, 1074
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PdmI GAANNNNTTC 2 cut(s) 771, 1950
PfeI GAWTC 4 cut(s) 75, 608, 902, 1994
PflMI CCANNNNNTGG 1 cut(s) 26
PfoI TCCNGGA 1 cut(s) 7
PleI GAGTC 5 cut(s) 163, 607, 1642, 1709, 1921
PpsI GAGTC 5 cut(s) 163, 607, 1642, 1709, 1921
PpuMI RGGWCCY 1 cut(s) 1957
PsiI TTATAA 1 cut(s) 809
Psp124BI GAGCTC 1 cut(s) 1086
Psp5II RGGWCCY 1 cut(s) 1957
Psp6I CCWGG 5 cut(s) 437, 1351, 1417, 1450, 1489
PspGI CCWGG 5 cut(s) 437, 1351, 1417, 1450, 1489
PspN4I GGNNCC 7 cut(s) 6, 160, 503, 753, 928, 1383, 1746
PspOMI GGGCCC 1 cut(s) 158
PspPI GGNCC 7 cut(s) 158, 159, 1331, 1487, 1589, 1745, 1957
PspPPI RGGWCCY 1 cut(s) 1957
PsuI RGATCY 4 cut(s) 4, 751, 1846, 1965
PvuII CAGCTG 2 cut(s) 1291, 1343
RsaI GTAC 2 cut(s) 115, 206
RsaNI GTAC 2 cut(s) 114, 205
RseI CAYNNNNRTG 1 cut(s) 69
SacI GAGCTC 1 cut(s) 1086
SapI GCTCTTC 2 cut(s) 762, 1074
SaqAI TTAA 1 cut(s) 1022
Sau3AI GATC 9 cut(s) 4, 81, 427, 694, 751, 1034, 1694, 1846, 1965
Sau96I GGNCC 7 cut(s) 158, 159, 1331, 1487, 1589, 1745, 1957
SchI GAGTC 5 cut(s) 163, 608, 1643, 1710, 1922
ScrFI CCNGG 8 cut(s) 9, 439, 878, 1353, 1419, 1452, 1491, 1867
SduI GDGCHC 5 cut(s) 162, 504, 878, 955, 1086
SexAI ACCWGGT 1 cut(s) 1489
SfaNI GCATC 6 cut(s) 104, 117, 424, 874, 1743, 1860
SfcI CTRYAG 1 cut(s) 645
SfuI TTCGAA 1 cut(s) 258
SinI GGWCC 5 cut(s) 1331, 1487, 1589, 1745, 1957
SmiMI CAYNNNNRTG 1 cut(s) 69
SmlI CTYRAG 2 cut(s) 475, 1961
SmoI CTYRAG 2 cut(s) 475, 1961
SpeI ACTAGT 1 cut(s) 1825
SsiI CCGC 1 cut(s) 166
SspMI CTAG 6 cut(s) 348, 846, 888, 1826, 1986, 2007
SstI GAGCTC 1 cut(s) 1086
StyD4I CCNGG 8 cut(s) 7, 437, 876, 1351, 1417, 1450, 1489, 1865
StyI CCWWGG 2 cut(s) 930, 1532
TaaI ACNGT 2 cut(s) 649, 1614
TaiI ACGT 4 cut(s) 93, 210, 1044, 1681
TaqI TCGA 6 cut(s) 56, 258, 697, 1414, 1628, 1970
TaqII GACCGA 1 cut(s) 254
TatI WGTACW 1 cut(s) 113
TfiI GAWTC 4 cut(s) 75, 608, 902, 1994
Tru1I TTAA 1 cut(s) 1022
Tru9I TTAA 1 cut(s) 1022
TscAI CASTG 2 cut(s) 1078, 1410
TseFI GTSAC 3 cut(s) 123, 1069, 1679
Tsp45I GTSAC 3 cut(s) 123, 1069, 1679
TspDTI ATGAA 6 cut(s) 846, 1092, 1208, 1223, 1700, 1991
TspGWI ACGGA 2 cut(s) 274, 1021
TspRI CASTG 2 cut(s) 1078, 1410
Van91I CCANNNNNTGG 1 cut(s) 26
VpaK11BI GGWCC 5 cut(s) 1331, 1487, 1589, 1745, 1957
XagI CCTNNNNNAGG 2 cut(s) 1416, 1584
XapI RAATTY 5 cut(s) 521, 730, 745, 840, 1025
XbaI TCTAGA 1 cut(s) 845
XmnI GAANNNNTTC 2 cut(s) 771, 1950
XspI CTAG 6 cut(s) 348, 846, 888, 1826, 1986, 2007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.