Rmu_sc0006621.1_g000003

Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006621.1
Physical Location & Seq
Forward (+)
8776 .. 10397
1622 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006621.1_g000003.1.cds

Sequence Viewer

Length: 660 bp
atggttgccccccaaaaggacccgagagaggaagtcattcaagcatggtacatggatgatagtgatgaggaccagagactaccccatcaccgcgagcccaaggaatttgtatccctggaccaacttgctgagctgggggttctcagctggcgtttagatgctgataactatgaaaccgatgaggagttgaagaagattcgtgaagaacgtggttactcctacatggacttctgtgaggtttgccctgaaaagctaccaaattatgaggagaagataaagaacttctttgaggaacatcttcacactgatgaggagatccgctatgctgtggcaggaagtggtatattaattatgctttatcctgttttgttgtcccatatttatctgcctgttcagacatgtgacattttactttcttgtgaaggttattttgatgttagggactgtaacgaacgctggattcgtgtatgggtgaaaaagggtggaatgattgttttgcctgctggaatttatcaccgctttactttggacacagacaactacataaaggtatcgtttcaatgcctgcaaatatttttgttcacttttctttttcctgttctgtcatctccaaggaagtcaagttttgagatgccctatactcactacaagacaacttaa

Protein Analysis

219

Amino Acids

26.0

Weight (kDa)

4.92

Isoelectric Point (pI)

49.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 93
AciI CCGC 3 cut(s) 91, 319, 517
AclWI GGATC 1 cut(s) 310
AcsI RAATTY 2 cut(s) 104, 507
AfaI GTAC 1 cut(s) 50
AfiI CCNNNNNNNGG 2 cut(s) 16, 28
AflIII ACRYGT 1 cut(s) 398
AgsI TTSAA 3 cut(s) 41, 190, 560
AjnI CCWGG 1 cut(s) 114
AluBI AGCT 3 cut(s) 133, 147, 253
AluI AGCT 3 cut(s) 133, 147, 253
Alw26I GTCTC 1 cut(s) 70
AlwI GGATC 1 cut(s) 310
Ama87I CYCGRG 1 cut(s) 22
ApoI RAATTY 2 cut(s) 104, 507
AseI ATTAAT 1 cut(s) 347
Asp700I GAANNNNTTC 2 cut(s) 36, 297
AspS9I GGNCC 3 cut(s) 19, 70, 118
AsuHPI GGTGA 3 cut(s) 80, 484, 506
AvaI CYCGRG 1 cut(s) 22
AvaII GGWCC 3 cut(s) 19, 70, 118
BanII GRGCYC 1 cut(s) 99
BccI CCATC 1 cut(s) 93
BciT130I CCWGG 1 cut(s) 116
BciVI GTATCC 1 cut(s) 121
BcoDI GTCTC 1 cut(s) 70
BfuI GTATCC 1 cut(s) 121
BlpI GCTNAGC 1 cut(s) 129
Bme1390I CCNGG 1 cut(s) 116
Bme18I GGWCC 3 cut(s) 19, 70, 118
BmeT110I CYCGRG 1 cut(s) 22
BmgT120I GGNCC 3 cut(s) 19, 70, 118
BmiI GGNNCC 1 cut(s) 21
BmrFI CCNGG 1 cut(s) 116
BmsI GCATC 2 cut(s) 148, 621
Bpu1102I GCTNAGC 1 cut(s) 129
BsaJI CCNNGG 3 cut(s) 99, 114, 611
Bsc4I CCNNNNNNNGG 2 cut(s) 16, 28
BseBI CCWGG 1 cut(s) 116
BseDI CCNNGG 3 cut(s) 99, 114, 611
BseGI GGATG 1 cut(s) 61
BseLI CCNNNNNNNGG 2 cut(s) 16, 28
BseMII CTCAG 2 cut(s) 120, 157
BseRI GAGGAG 3 cut(s) 197, 281, 326
BseYI CCCAGC 1 cut(s) 133
Bsh1236I CGCG 1 cut(s) 93
BsiHKCI CYCGRG 1 cut(s) 22
BslFI GGGAC 2 cut(s) 358, 455
BslI CCNNNNNNNGG 2 cut(s) 16, 28
BsmAI GTCTC 1 cut(s) 70
BsmFI GGGAC 2 cut(s) 358, 455
BsoBI CYCGRG 1 cut(s) 22
Bsp1286I GDGCHC 1 cut(s) 99
Bsp143I GATC 1 cut(s) 315
Bsp1720I GCTNAGC 1 cut(s) 129
BspACI CCGC 3 cut(s) 91, 319, 517
BspCNI CTCAG 2 cut(s) 121, 156
BspFNI CGCG 1 cut(s) 93
BspLI GGNNCC 1 cut(s) 21
BspPI GGATC 1 cut(s) 310
BssECI CCNNGG 3 cut(s) 99, 114, 611
BssMI GATC 1 cut(s) 315
BssT1I CCWWGG 2 cut(s) 99, 611
Bst2UI CCWGG 1 cut(s) 116
Bst4CI ACNGT 1 cut(s) 446
BstC8I GCNNGC 4 cut(s) 95, 149, 501, 566
BstDEI CTNAG 2 cut(s) 129, 143
BstF5I GGATG 1 cut(s) 61
BstFNI CGCG 1 cut(s) 93
BstKTI GATC 1 cut(s) 318
BstMAI GTCTC 1 cut(s) 70
BstMBI GATC 1 cut(s) 315
BstNI CCWGG 1 cut(s) 116
BstNSI RCATGY 1 cut(s) 402
BstSCI CCNGG 1 cut(s) 114
BstUI CGCG 1 cut(s) 93
BstX2I RGATCY 1 cut(s) 315
BstYI RGATCY 1 cut(s) 315
BsuI GTATCC 1 cut(s) 121
BtsCI GGATG 1 cut(s) 61
BtsIMutI CAGTG 1 cut(s) 303
Cac8I GCNNGC 4 cut(s) 95, 149, 501, 566
Cfr13I GGNCC 3 cut(s) 19, 70, 118
Csp6I GTAC 1 cut(s) 49
CviAII CATG 4 cut(s) 45, 52, 223, 399
CviJI RGCY 4 cut(s) 97, 133, 147, 253
CviKI_1 RGCY 4 cut(s) 97, 133, 147, 253
CviQI GTAC 1 cut(s) 49
DdeI CTNAG 2 cut(s) 129, 143
DpnI GATC 1 cut(s) 317
DpnII GATC 1 cut(s) 315
Eco130I CCWWGG 2 cut(s) 99, 611
Eco24I GRGCYC 1 cut(s) 99
Eco47I GGWCC 3 cut(s) 19, 70, 118
Eco88I CYCGRG 1 cut(s) 22
EcoO109I RGGNCCY 1 cut(s) 19
EcoRII CCWGG 1 cut(s) 114
EcoT14I CCWWGG 2 cut(s) 99, 611
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 2 cut(s) 99, 611
FaeI CATG 4 cut(s) 48, 55, 226, 402
FalI AAGNNNNNCTT 2 cut(s) 269, 301
FaqI GGGAC 2 cut(s) 358, 455
FatI CATG 4 cut(s) 44, 51, 222, 398
FokI GGATG 1 cut(s) 68
FriOI GRGCYC 1 cut(s) 99
GsaI CCCAGC 1 cut(s) 137
Hin1II CATG 4 cut(s) 48, 55, 226, 402
HinfI GANTC 2 cut(s) 196, 460
HphI GGTGA 3 cut(s) 80, 484, 506
Hpy166II GTNNAC 1 cut(s) 582
Hpy188I TCNGA 1 cut(s) 396
Hpy188III TCNNGA 1 cut(s) 200
Hpy8I GTNNAC 1 cut(s) 582
HpyAV CCTTC 1 cut(s) 416
HpyCH4III ACNGT 1 cut(s) 446
HpyCH4IV ACGT 1 cut(s) 208
HpyCH4V TGCA 1 cut(s) 568
HpyF3I CTNAG 2 cut(s) 129, 143
HpySE526I ACGT 1 cut(s) 208
Hsp92II CATG 4 cut(s) 48, 55, 226, 402
Kzo9I GATC 1 cut(s) 315
LweI GCATC 2 cut(s) 148, 621
MaeII ACGT 1 cut(s) 208
MaeIII GTNAC 3 cut(s) 212, 401, 446
MalI GATC 1 cut(s) 317
MboI GATC 1 cut(s) 315
MboII GAAGA 5 cut(s) 202, 205, 215, 283, 290
MflI RGATCY 1 cut(s) 315
MhlI GDGCHC 1 cut(s) 99
MluCI AATT 4 cut(s) 104, 259, 348, 507
MnlI CCTC 7 cut(s) 22, 61, 175, 229, 259, 283, 304
MroXI GAANNNNTTC 2 cut(s) 36, 297
MseI TTAA 2 cut(s) 347, 658
MslI CAYNNNNRTG 1 cut(s) 306
MspA1I CMGCKG 1 cut(s) 147
MspR9I CCNGG 1 cut(s) 116
MvaI CCWGG 1 cut(s) 116
MvnI CGCG 1 cut(s) 93
NdeII GATC 1 cut(s) 315
NlaIII CATG 4 cut(s) 48, 55, 226, 402
NlaIV GGNNCC 1 cut(s) 21
NmuCI GTSAC 1 cut(s) 401
NspI RCATGY 1 cut(s) 402
PciI ACATGT 1 cut(s) 398
PcsI WCGNNNNNNNCGW 2 cut(s) 205, 460
PdmI GAANNNNTTC 2 cut(s) 36, 297
PfeI GAWTC 2 cut(s) 196, 460
PpuMI RGGWCCY 1 cut(s) 19
PscI ACATGT 1 cut(s) 398
PshBI ATTAAT 1 cut(s) 347
Psp5II RGGWCCY 1 cut(s) 19
Psp6I CCWGG 1 cut(s) 114
PspFI CCCAGC 1 cut(s) 133
PspGI CCWGG 1 cut(s) 114
PspN4I GGNNCC 1 cut(s) 21
PspPI GGNCC 3 cut(s) 19, 70, 118
PspPPI RGGWCCY 1 cut(s) 19
PsuI RGATCY 1 cut(s) 315
PvuII CAGCTG 1 cut(s) 147
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
RseI CAYNNNNRTG 1 cut(s) 306
SaqAI TTAA 2 cut(s) 347, 658
Sau3AI GATC 1 cut(s) 315
Sau96I GGNCC 3 cut(s) 19, 70, 118
ScrFI CCNGG 1 cut(s) 116
SduI GDGCHC 1 cut(s) 99
SetI ASST 7 cut(s) 135, 149, 211, 240, 255, 427, 552
SfaNI GCATC 2 cut(s) 148, 621
SinI GGWCC 3 cut(s) 19, 70, 118
SmiMI CAYNNNNRTG 1 cut(s) 306
Sse9I AATT 4 cut(s) 104, 259, 348, 507
SsiI CCGC 3 cut(s) 91, 319, 517
SspI AATATT 1 cut(s) 573
StyD4I CCNGG 1 cut(s) 114
StyI CCWWGG 2 cut(s) 99, 611
TaaI ACNGT 1 cut(s) 446
TaiI ACGT 1 cut(s) 211
TasI AATT 4 cut(s) 104, 259, 348, 507
TfiI GAWTC 2 cut(s) 196, 460
Tru1I TTAA 2 cut(s) 347, 658
Tru9I TTAA 2 cut(s) 347, 658
TscAI CASTG 1 cut(s) 310
TseFI GTSAC 1 cut(s) 401
Tsp45I GTSAC 1 cut(s) 401
TspDTI ATGAA 1 cut(s) 186
TspRI CASTG 1 cut(s) 310
VpaK11BI GGWCC 3 cut(s) 19, 70, 118
VspI ATTAAT 1 cut(s) 347
XapI RAATTY 2 cut(s) 104, 507
XceI RCATGY 1 cut(s) 402
XmnI GAANNNNTTC 2 cut(s) 36, 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.