Rmu_sc0006732.1_g000009

Domain of unknown function (DUF3527)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006732.1
OG0006314
Physical Location & Seq
Reverse (-)
46900 .. 50589
3690 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2433 bp
atgggactagagatggagttcgagaaaaactgcagagtgggtctgagtcccaacactgttcttccaactcatcggcattcctgtgttgaaaagagaagcacaaaaggtagaccgccacgcaaagatgatctattgagcatcaaggaggggtttgtggaaatcagctttcagcgctatcgcagcacttcttgtaaggtaccatctagacctgttggacaggaagttaacatagaacttaagcgaggttctatatatcaaaactccaaggaggttagggaaattaagaaaatgggcactgctgagggaaggaaaaagattgaaaagtcacgatgtagtgactcgtctttctcttacagaattgtcgattcgttgcgtagttcaggtgatgaaagcccacagaataggtcttccgtactgtctttgaaacccgaactgaatgtaccatctgctggaaggcctcatgtagagccgtgttcattggatagcattcttgaaatttgtgtggatccagatgacagggaagagcactcagctgaagctttaggagaagatccaatgcgtttgaatctaagaagtgatccagttgctggacctctaaacaacggaaatgaacttcttgaaagagatgaagttcacaaattgcccaagtcattttctgctaagttggaaatgcttcatactccttctccatcggagagtgatcgctcgtccagtgtgagctcaaaggcccggttcaacaatttaagaaaaatgtttgatccattcatgaagtccaagtcattgcgaagtccaagttatgttgtggaacctgggggagccaaaacaactggaatggtggacatgacaaaaagcaggacatatcaaaaatctttgttacctgtctttgcaaatacggtacagaatgcaggttgtgattctctgtgtatcaaccaagataaccaccagtctagtgtagcatcttcaccggttcacctacatggccatcttaaattacaaaataaacatggaatgccattttttgagttctcgttgaagggatcagaagatgtctttgtggccaggacatggaaagcggataatggttttaactgggtgtatacctttcatgccgttggtggtagaaagaagagcaatgccagcagtgtgggattgcatggtagcgatagagattcttcaatggtgggacagatgccagtttcttgttatctatgttcagaactaagagatggagcttttgacaattccatggtgacagagtttgttttgtatgatatctgtcatgcaaggcagattgcagcagaaaaagcacactctacttgtacccttgatgatgctaaacatcccaaaggttccaatcagagcacggagggtgcaactttaaagttgggtgatgggtcttgtccaacgaaggtcaaatctcaacacaagagcagtgattccgattctccagcctggccatttgcagctctgcatccaggtcttgaaattgcagccattgttatgcaagttccatttgaaaagagagagagcttgaaatacaagagaggggataaggtatgtgataaagtacctgcaaacctacttaagctgtccatggttgaacagaagaacaaggatgaccctgataatcaaaactcaggaaacttgaaggtgataattccatctggaaatcatggttttccggttgctgaaagcaagggtccttcgtcgttactagatcgatggaggttgggtggtggttgtgactgtggtggctgggacatgtcctgtcctcttactgtgttaagcaatcccaacattcagttagctgataatcaattatttgaagagactcagcagcctttggaactttttgttcagggatcaaaggagaaaaaaccagcattgaccatgacaatggttgaagatggacagtatgcagttgattttcatgcacagttgtcgacattacaagcattctctatgtgtgtttctattctgcatggtacagaaacatcgacagcagtcactgggcaggaggaaagcaaacagttgtcgcagtgcaattcattgaaagtgcttaaagaggaagtgaagttcttaattgaagcagtcacagaaggggagaagaagaaagtagctaagaggttaatggaagggtatcagaaacagatggctgagacaatgccagccgcaaccggtactgggggtcatatgctcggccaaccacagaacgtggctgacctcacaggggctgcggagagagaagagaaacagacgccacagaattgcttcgatctcggcctgggggcaacgtctgggccggctgacgccacggagtggccggatgaggggaggcgacctcgggttgcttcgatctcggcctggggttgcttcgatctcggcctaggggcagcgtcagggccggctgacgccacggagtggccggaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH DUF3527 TFIIS_M

Protein Analysis

810

Amino Acids

88.72

Weight (kDa)

6.45

Isoelectric Point (pI)

49.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3527 PF12043 322 - 662 2.4e-108 Domain of unknown function (DUF3527)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 896, 1579
Acc65I GGTACC 1 cut(s) 196
AccB1I GGYRCC 1 cut(s) 196
AccB7I CCANNNNNTGG 5 cut(s) 449, 587, 1065, 2319, 2421
AccI GTMKAC 3 cut(s) 109, 1097, 1943
AciI CCGC 4 cut(s) 113, 1073, 2172, 2237
AclWI GGATC 7 cut(s) 500, 513, 545, 572, 752, 1045, 1870
AcoI YGGCCR 6 cut(s) 979, 1056, 1454, 2200, 2321, 2423
AcsI RAATTY 1 cut(s) 495
AcuI CTGAAG 1 cut(s) 555
AcyI GRCGYC 3 cut(s) 2258, 2310, 2412
AdeI CACNNNGTG 2 cut(s) 2319, 2421
AfaI GTAC 8 cut(s) 198, 414, 441, 897, 1321, 1569, 1987, 2182
AfeI AGCGCT 1 cut(s) 173
AfiI CCNNNNNNNGG 8 cut(s) 449, 587, 1065, 2184, 2230, 2319, 2330, 2421
AflII CTTAAG 2 cut(s) 236, 1583
AflIII ACRYGT 1 cut(s) 1761
AgeI ACCGGT 2 cut(s) 964, 2177
AjnI CCWGG 6 cut(s) 808, 1058, 1451, 1474, 2283, 2363
AloI GAACNNNNNNTCC 2 cut(s) 2060, 2092
Alw21I GWGCWC 3 cut(s) 528, 722, 1364
Alw26I GTCTC 2 cut(s) 1823, 2153
AlwI GGATC 7 cut(s) 500, 513, 545, 572, 752, 1045, 1870
AlwNI CAGNNNCTG 3 cut(s) 587, 2009, 2234
Ama87I CYCGRG 1 cut(s) 2343
Aor51HI AGCGCT 1 cut(s) 173
ApeKI GCWGC 7 cut(s) 180, 1295, 1463, 1490, 1837, 2234, 2393
ApoI RAATTY 1 cut(s) 495
AsiGI ACCGGT 2 cut(s) 964, 2177
Asp700I GAANNNNTTC 2 cut(s) 672, 2270
Asp718I GGTACC 1 cut(s) 196
AspA2I CCTAGG 1 cut(s) 2386
AspLEI GCGC 1 cut(s) 174
AspS9I GGNCC 5 cut(s) 590, 727, 1700, 2300, 2402
AsuC2I CCSGG 1 cut(s) 730
AsuHPI GGTGA 6 cut(s) 395, 954, 962, 1261, 1400, 1663
AvaI CYCGRG 1 cut(s) 2343
AvaII GGWCC 2 cut(s) 590, 1700
AvrII CCTAGG 1 cut(s) 2386
BaeGI GKGCMC 1 cut(s) 296
BalI TGGCCA 3 cut(s) 981, 1058, 1456
BamHI GGATCC 1 cut(s) 505
BanI GGYRCC 1 cut(s) 196
BanII GRGCYC 1 cut(s) 722
BbsI GAAGAC 1 cut(s) 399
Bbv12I GWGCWC 3 cut(s) 528, 722, 1364
BbvCI CCTCAGC 1 cut(s) 300
BbvI GCAGC 7 cut(s) 192, 1307, 1475, 1502, 1849, 2221, 2405
BceAI ACGGC 2 cut(s) 454, 1094
BcgI CGANNNNNNTGC 2 cut(s) 1923, 1957
BciT130I CCWGG 6 cut(s) 810, 1060, 1453, 1476, 2285, 2365
BcnI CCSGG 1 cut(s) 730
BcoDI GTCTC 2 cut(s) 1823, 2153
BfaI CTAG 5 cut(s) 8, 204, 948, 1715, 2387
BfmI CTRYAG 1 cut(s) 31
BfoI RGCGCY 1 cut(s) 175
BfrI CTTAAG 2 cut(s) 236, 1583
BfuAI ACCTGC 2 cut(s) 896, 1579
BisI GCNGC 8 cut(s) 181, 1296, 1464, 1491, 1838, 2172, 2235, 2394
BlnI CCTAGG 1 cut(s) 2386
BlsI GCNGC 8 cut(s) 182, 1297, 1465, 1492, 1839, 2173, 2236, 2395
Bme1390I CCNGG 7 cut(s) 730, 810, 1060, 1453, 1476, 2285, 2365
Bme18I GGWCC 2 cut(s) 590, 1700
BmeT110I CYCGRG 1 cut(s) 2343
BmgT120I GGNCC 5 cut(s) 590, 727, 1700, 2300, 2402
BmiI GGNNCC 6 cut(s) 198, 507, 807, 817, 1351, 1701
BmrFI CCNGG 7 cut(s) 730, 810, 1060, 1453, 1476, 2285, 2365
BmrI ACTGGG 3 cut(s) 1099, 2019, 2193
BmsI GCATC 5 cut(s) 147, 965, 1179, 1321, 1480
BmuI ACTGGG 3 cut(s) 1099, 2019, 2193
BoxI GACNNNNGTC 1 cut(s) 2003
BpiI GAAGAC 1 cut(s) 399
BplI GAGNNNNNCTC 2 cut(s) 2326, 2358
BpmI CTGGAG 1 cut(s) 1431
Bpu10I CCTNAGC 1 cut(s) 300
BpuMI CCSGG 1 cut(s) 730
Bsa29I ATCGAT 1 cut(s) 1720
BsaHI GRCGYC 3 cut(s) 2258, 2310, 2412
BsaWI WCCGGW 3 cut(s) 964, 1681, 2177
BsaXI ACNNNNNCTCC 4 cut(s) 670, 700, 1717, 1747
Bsc4I CCNNNNNNNGG 8 cut(s) 449, 587, 1065, 2184, 2230, 2319, 2330, 2421
Bse118I RCCGGY 4 cut(s) 964, 2177, 2302, 2404
Bse1I ACTGG 8 cut(s) 581, 711, 832, 943, 1094, 1193, 2014, 2188
Bse3DI GCAATG 2 cut(s) 779, 1138
BseBI CCWGG 6 cut(s) 810, 1060, 1453, 1476, 2285, 2365
BseCI ATCGAT 1 cut(s) 1720
BseGI GGATG 4 cut(s) 1339, 1471, 1621, 2332
BseLI CCNNNNNNNGG 8 cut(s) 449, 587, 1065, 2184, 2230, 2319, 2330, 2421
BseMI GCAATG 2 cut(s) 779, 1138
BseMII CTCAG 6 cut(s) 35, 291, 543, 1650, 1847, 2148
BseNI ACTGG 8 cut(s) 581, 711, 832, 943, 1094, 1193, 2014, 2188
BseSI GKGCMC 1 cut(s) 296
BseXI GCAGC 7 cut(s) 192, 1307, 1475, 1502, 1849, 2221, 2405
BseYI CCCAGC 1 cut(s) 1755
BshNI GGYRCC 1 cut(s) 196
BshTI ACCGGT 2 cut(s) 964, 2177
BshVI ATCGAT 1 cut(s) 1720
BsiHKAI GWGCWC 3 cut(s) 528, 722, 1364
BsiHKCI CYCGRG 1 cut(s) 2343
BsiSI CCGG 8 cut(s) 730, 965, 1682, 2178, 2303, 2324, 2405, 2426
BslFI GGGAC 4 cut(s) 18, 33, 1197, 1772
BslI CCNNNNNNNGG 8 cut(s) 449, 587, 1065, 2184, 2230, 2319, 2330, 2421
BsmAI GTCTC 2 cut(s) 1823, 2153
BsmFI GGGAC 4 cut(s) 18, 33, 1197, 1772
BsmI GAATGC 5 cut(s) 76, 486, 907, 1014, 1955
BsoBI CYCGRG 1 cut(s) 2343
Bsp1286I GDGCHC 4 cut(s) 296, 528, 722, 1364
Bsp19I CCATGG 2 cut(s) 1245, 1593
BspACI CCGC 4 cut(s) 113, 1073, 2172, 2237
BspCNI CTCAG 6 cut(s) 36, 292, 542, 1649, 1846, 2149
BspDI ATCGAT 1 cut(s) 1720
BspHI TCATGA 1 cut(s) 765
BspLI GGNNCC 6 cut(s) 198, 507, 807, 817, 1351, 1701
BspMAI CTGCAG 1 cut(s) 35
BspMI ACCTGC 2 cut(s) 896, 1579
BspPI GGATC 7 cut(s) 500, 513, 545, 572, 752, 1045, 1870
BspQI GCTCTTC 2 cut(s) 516, 1121
BspT107I GGYRCC 1 cut(s) 196
BspTI CTTAAG 2 cut(s) 236, 1583
BsrDI GCAATG 2 cut(s) 779, 1138
BsrFI RCCGGY 4 cut(s) 964, 2177, 2302, 2404
BsrI ACTGG 8 cut(s) 581, 711, 832, 943, 1094, 1193, 2014, 2188
BssAI RCCGGY 4 cut(s) 964, 2177, 2302, 2404
BssNAI GTATAC 1 cut(s) 1098
BssNI GRCGYC 3 cut(s) 2258, 2310, 2412
BssT1I CCWWGG 4 cut(s) 264, 1245, 1593, 2386
Bst1107I GTATAC 1 cut(s) 1098
Bst2UI CCWGG 6 cut(s) 810, 1060, 1453, 1476, 2285, 2365
Bst4CI ACNGT 8 cut(s) 58, 417, 895, 1748, 1780, 1914, 1938, 2031
Bst6I CTCTTC 4 cut(s) 516, 1121, 1821, 2241
BstACI GRCGYC 3 cut(s) 2258, 2310, 2412
BstAFI CTTAAG 2 cut(s) 236, 1583
BstC8I GCNNGC 4 cut(s) 1138, 2169, 2304, 2406
BstDSI CCRYGG 4 cut(s) 1245, 1593, 2313, 2415
BstF5I GGATG 4 cut(s) 1339, 1471, 1621, 2332
BstH2I RGCGCY 1 cut(s) 175
BstHHI GCGC 1 cut(s) 174
BstMAI GTCTC 2 cut(s) 1823, 2153
BstMWI GCNNNNNNNGC 4 cut(s) 171, 180, 1137, 1304
BstNI CCWGG 6 cut(s) 810, 1060, 1453, 1476, 2285, 2365
BstNSI RCATGY 1 cut(s) 1765
BstPAI GACNNNNGTC 1 cut(s) 2003
BstSCI CCNGG 7 cut(s) 728, 808, 1058, 1451, 1474, 2283, 2363
BstSFI CTRYAG 1 cut(s) 31
BstSLI GKGCMC 1 cut(s) 296
BstV1I GCAGC 7 cut(s) 192, 1307, 1475, 1502, 1849, 2221, 2405
BstV2I GAAGAC 1 cut(s) 399
BstX2I RGATCY 2 cut(s) 505, 550
BstXI CCANNNNNNTGG 2 cut(s) 1144, 1897
BstYI RGATCY 2 cut(s) 505, 550
BstZ17I GTATAC 1 cut(s) 1098
Bsu15I ATCGAT 1 cut(s) 1720
BsuTUI ATCGAT 1 cut(s) 1720
BtgI CCRYGG 4 cut(s) 1245, 1593, 2313, 2415
BtsCI GGATG 4 cut(s) 1339, 1471, 1621, 2332
BtsI GCAGTG 4 cut(s) 294, 1147, 1438, 2045
BtsIMutI CAGTG 7 cut(s) 54, 294, 718, 1147, 1438, 2007, 2045
BveI ACCTGC 2 cut(s) 896, 1579
Cac8I GCNNGC 4 cut(s) 1138, 2169, 2304, 2406
CaiI CAGNNNCTG 3 cut(s) 587, 2009, 2234
CciI TCATGA 1 cut(s) 765
CfoI GCGC 1 cut(s) 174
Cfr10I RCCGGY 4 cut(s) 964, 2177, 2302, 2404
Cfr13I GGNCC 5 cut(s) 590, 727, 1700, 2300, 2402
ClaI ATCGAT 1 cut(s) 1720
CseI GACGC 4 cut(s) 2266, 2318, 2385, 2420
Csp6I GTAC 8 cut(s) 197, 413, 440, 896, 1320, 1568, 1986, 2181
CspAI ACCGGT 2 cut(s) 964, 2177
CviQI GTAC 8 cut(s) 197, 413, 440, 896, 1320, 1568, 1986, 2181
DraI TTTAAA 1 cut(s) 1380
DraIII CACNNNGTG 2 cut(s) 2319, 2421
EaeI YGGCCR 6 cut(s) 979, 1056, 1454, 2200, 2321, 2423
Eam1104I CTCTTC 4 cut(s) 516, 1121, 1821, 2241
EarI CTCTTC 4 cut(s) 516, 1121, 1821, 2241
Ecl136II GAGCTC 1 cut(s) 720
Eco130I CCWWGG 4 cut(s) 264, 1245, 1593, 2386
Eco147I AGGCCT 1 cut(s) 457
Eco24I GRGCYC 1 cut(s) 722
Eco32I GATATC 1 cut(s) 1273
Eco47I GGWCC 2 cut(s) 590, 1700
Eco47III AGCGCT 1 cut(s) 173
Eco53kI GAGCTC 1 cut(s) 720
Eco57I CTGAAG 1 cut(s) 555
Eco88I CYCGRG 1 cut(s) 2343
EcoICRI GAGCTC 1 cut(s) 720
EcoO109I RGGNCCY 1 cut(s) 1700
EcoRII CCWGG 6 cut(s) 808, 1058, 1451, 1474, 2283, 2363
EcoRV GATATC 1 cut(s) 1273
EcoT14I CCWWGG 4 cut(s) 264, 1245, 1593, 2386
EcoT38I GRGCYC 1 cut(s) 722
ErhI CCWWGG 4 cut(s) 264, 1245, 1593, 2386
FaqI GGGAC 4 cut(s) 18, 33, 1197, 1772
FauNDI CATATG 1 cut(s) 2193
FblI GTMKAC 3 cut(s) 109, 1097, 1943
Fnu4HI GCNGC 8 cut(s) 181, 1296, 1464, 1491, 1838, 2172, 2235, 2394
FokI GGATG 4 cut(s) 1326, 1458, 1628, 2339
FriOI GRGCYC 1 cut(s) 722
Fsp4HI GCNGC 8 cut(s) 181, 1296, 1464, 1491, 1838, 2172, 2235, 2394
FspBI CTAG 5 cut(s) 8, 204, 948, 1715, 2387
GlaI GCGC 1 cut(s) 173
GluI GCNGC 8 cut(s) 181, 1296, 1464, 1491, 1838, 2172, 2235, 2394
GsaI CCCAGC 1 cut(s) 1759
GsuI CTGGAG 1 cut(s) 1431
HaeII RGCGCY 1 cut(s) 175
HapII CCGG 8 cut(s) 730, 965, 1682, 2178, 2303, 2324, 2405, 2426
HgaI GACGC 4 cut(s) 2266, 2318, 2385, 2420
HhaI GCGC 1 cut(s) 174
Hin1I GRCGYC 3 cut(s) 2258, 2310, 2412
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HincII GTYRAC 2 cut(s) 226, 1944
HindII GTYRAC 2 cut(s) 226, 1944
HindIII AAGCTT 1 cut(s) 537
HinfI GANTC 9 cut(s) 46, 338, 365, 565, 914, 1169, 1436, 1442, 1831
HpaI GTTAAC 1 cut(s) 226
HpaII CCGG 8 cut(s) 730, 965, 1682, 2178, 2303, 2324, 2405, 2426
HphI GGTGA 6 cut(s) 395, 954, 962, 1261, 1400, 1663
Hpy166II GTNNAC 7 cut(s) 110, 226, 634, 838, 970, 1098, 1944
Hpy188I TCNGA 7 cut(s) 45, 694, 1042, 1216, 1359, 1441, 2145
Hpy8I GTNNAC 7 cut(s) 110, 226, 634, 838, 970, 1098, 1944
Hpy99I CGWCG 1 cut(s) 1711
HpyAV CCTTC 9 cut(s) 300, 447, 693, 1027, 1402, 1642, 1713, 2093, 2129
HpyCH4III ACNGT 8 cut(s) 58, 417, 895, 1748, 1780, 1914, 1938, 2031
HpyCH4IV ACGT 2 cut(s) 2214, 2294
HpyF10VI GCNNNNNNNGC 4 cut(s) 171, 180, 1137, 1304
HpySE526I ACGT 2 cut(s) 2214, 2294
Hsp92I GRCGYC 3 cut(s) 2258, 2310, 2412
HspAI GCGC 1 cut(s) 172
KpnI GGTACC 1 cut(s) 200
KroI GCCGGC 2 cut(s) 2302, 2404
KroNI GCCGGC 2 cut(s) 2304, 2406
KspAI GTTAAC 1 cut(s) 226
LguI GCTCTTC 2 cut(s) 516, 1121
LmnI GCTCC 2 cut(s) 815, 1229
Lsp1109I GCAGC 7 cut(s) 192, 1307, 1475, 1502, 1849, 2221, 2405
LweI GCATC 5 cut(s) 147, 965, 1179, 1321, 1480
MaeI CTAG 5 cut(s) 8, 204, 948, 1715, 2387
MaeII ACGT 2 cut(s) 2214, 2294
MaeIII GTNAC 8 cut(s) 324, 335, 873, 1249, 1710, 1742, 2005, 2092
MflI RGATCY 2 cut(s) 505, 550
MhlI GDGCHC 4 cut(s) 296, 528, 722, 1364
MlsI TGGCCA 3 cut(s) 981, 1058, 1456
MluNI TGGCCA 3 cut(s) 981, 1058, 1456
MlyI GAGTC 3 cut(s) 55, 332, 1825
MmeI TCCRAC 4 cut(s) 89, 193, 645, 1427
Mox20I TGGCCA 3 cut(s) 981, 1058, 1456
MroNI GCCGGC 2 cut(s) 2302, 2404
MroXI GAANNNNTTC 2 cut(s) 672, 2270
MscI TGGCCA 3 cut(s) 981, 1058, 1456
MslI CAYNNNNRTG 4 cut(s) 81, 975, 1499, 1895
Msp20I TGGCCA 3 cut(s) 981, 1058, 1456
MspA1I CMGCKG 1 cut(s) 533
MspCI CTTAAG 2 cut(s) 236, 1583
MspI CCGG 8 cut(s) 730, 965, 1682, 2178, 2303, 2324, 2405, 2426
MspR9I CCNGG 7 cut(s) 730, 810, 1060, 1453, 1476, 2285, 2365
Mva1269I GAATGC 5 cut(s) 76, 486, 907, 1014, 1955
MvaI CCWGG 6 cut(s) 810, 1060, 1453, 1476, 2285, 2365
MwoI GCNNNNNNNGC 4 cut(s) 171, 180, 1137, 1304
NaeI GCCGGC 2 cut(s) 2304, 2406
NciI CCSGG 1 cut(s) 730
NcoI CCATGG 2 cut(s) 1245, 1593
NdeI CATATG 1 cut(s) 2193
NgoMIV GCCGGC 2 cut(s) 2302, 2404
NlaIV GGNNCC 6 cut(s) 198, 507, 807, 817, 1351, 1701
NmeAIII GCCGAG 4 cut(s) 2178, 2259, 2339, 2361
NmuCI GTSAC 6 cut(s) 324, 335, 1249, 1742, 2005, 2092
NspI RCATGY 1 cut(s) 1765
PagI TCATGA 1 cut(s) 765
PceI AGGCCT 1 cut(s) 457
PciI ACATGT 1 cut(s) 1761
PciSI GCTCTTC 2 cut(s) 516, 1121
PctI GAATGC 5 cut(s) 76, 486, 907, 1014, 1955
PdiI GCCGGC 2 cut(s) 2304, 2406
PdmI GAANNNNTTC 2 cut(s) 672, 2270
PfeI GAWTC 6 cut(s) 365, 565, 914, 1169, 1436, 1442
PflMI CCANNNNNTGG 5 cut(s) 449, 587, 1065, 2319, 2421
PinAI ACCGGT 2 cut(s) 964, 2177
PkrI GCNGC 8 cut(s) 182, 1297, 1465, 1492, 1839, 2173, 2236, 2395
PleI GAGTC 3 cut(s) 54, 332, 1825
PpsI GAGTC 3 cut(s) 54, 332, 1825
PpuMI RGGWCCY 1 cut(s) 1700
PscI ACATGT 1 cut(s) 1761
PshAI GACNNNNGTC 1 cut(s) 2003
Psp124BI GAGCTC 1 cut(s) 722
Psp5II RGGWCCY 1 cut(s) 1700
Psp6I CCWGG 6 cut(s) 808, 1058, 1451, 1474, 2283, 2363
PspFI CCCAGC 1 cut(s) 1755
PspGI CCWGG 6 cut(s) 808, 1058, 1451, 1474, 2283, 2363
PspN4I GGNNCC 6 cut(s) 198, 507, 807, 817, 1351, 1701
PspPI GGNCC 5 cut(s) 590, 727, 1700, 2300, 2402
PspPPI RGGWCCY 1 cut(s) 1700
PsrI GAACNNNNNNTAC 2 cut(s) 423, 455
PstI CTGCAG 1 cut(s) 35
PstNI CAGNNNCTG 3 cut(s) 587, 2009, 2234
PsuI RGATCY 2 cut(s) 505, 550
PvuII CAGCTG 1 cut(s) 533
RsaI GTAC 8 cut(s) 198, 414, 441, 897, 1321, 1569, 1987, 2182
RsaNI GTAC 8 cut(s) 197, 413, 440, 896, 1320, 1568, 1986, 2181
RseI CAYNNNNRTG 4 cut(s) 81, 975, 1499, 1895
SacI GAGCTC 1 cut(s) 722
SalI GTCGAC 1 cut(s) 1942
SapI GCTCTTC 2 cut(s) 516, 1121
SatI GCNGC 8 cut(s) 181, 1296, 1464, 1491, 1838, 2172, 2235, 2394
Sau96I GGNCC 5 cut(s) 590, 727, 1700, 2300, 2402
SchI GAGTC 3 cut(s) 55, 332, 1825
ScrFI CCNGG 7 cut(s) 730, 810, 1060, 1453, 1476, 2285, 2365
SduI GDGCHC 4 cut(s) 296, 528, 722, 1364
SfaNI GCATC 5 cut(s) 147, 965, 1179, 1321, 1480
SfcI CTRYAG 1 cut(s) 31
SinI GGWCC 2 cut(s) 590, 1700
SmiMI CAYNNNNRTG 4 cut(s) 81, 975, 1499, 1895
SmlI CTYRAG 2 cut(s) 236, 1583
SmoI CTYRAG 2 cut(s) 236, 1583
SseBI AGGCCT 1 cut(s) 457
SsiI CCGC 4 cut(s) 113, 1073, 2172, 2237
SspMI CTAG 5 cut(s) 8, 204, 948, 1715, 2387
SstI GAGCTC 1 cut(s) 722
StuI AGGCCT 1 cut(s) 457
StyD4I CCNGG 7 cut(s) 728, 808, 1058, 1451, 1474, 2283, 2363
StyI CCWWGG 4 cut(s) 264, 1245, 1593, 2386
TaaI ACNGT 8 cut(s) 58, 417, 895, 1748, 1780, 1914, 1938, 2031
TaiI ACGT 2 cut(s) 2217, 2297
TaqI TCGA 8 cut(s) 21, 363, 1720, 1943, 1997, 2274, 2354, 2376
TauI GCSGC 1 cut(s) 2174
TfiI GAWTC 6 cut(s) 365, 565, 914, 1169, 1436, 1442
TscAI CASTG 7 cut(s) 61, 301, 718, 1147, 1438, 2014, 2045
TseFI GTSAC 6 cut(s) 324, 335, 1249, 1742, 2005, 2092
TseI GCWGC 7 cut(s) 180, 1295, 1463, 1490, 1837, 2234, 2393
Tsp45I GTSAC 6 cut(s) 324, 335, 1249, 1742, 2005, 2092
TspGWI ACGGA 5 cut(s) 400, 618, 1379, 2330, 2432
TspRI CASTG 7 cut(s) 61, 301, 718, 1147, 1438, 2014, 2045
Van91I CCANNNNNTGG 5 cut(s) 449, 587, 1065, 2319, 2421
Vha464I CTTAAG 2 cut(s) 236, 1583
VpaK11BI GGWCC 2 cut(s) 590, 1700
XapI RAATTY 1 cut(s) 495
XbaI TCTAGA 1 cut(s) 203
XceI RCATGY 1 cut(s) 1765
XmaJI CCTAGG 1 cut(s) 2386
XmiI GTMKAC 3 cut(s) 109, 1097, 1943
XmnI GAANNNNTTC 2 cut(s) 672, 2270
XspI CTAG 5 cut(s) 8, 204, 948, 1715, 2387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.