Rmu_sc0009880.1_g000006

Serine/Threonine protein kinases, catalytic domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009880.1
Physical Location & Seq
Forward (+)
17787 .. 27303
9517 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009880.1_g000006.1.cds

Sequence Viewer

Length: 1953 bp
atggagaagaagaaatatccgataggacccgagcactacacgctctacgaggaggtcggccaaggtgtaagcgcctccgtacaccgtgctgtttgtaagcccttcaatgaggttgttgccatcaaaatcctcgacttcgaaagagataattgtgatctgaataatatatcacgtgaagcgcaaacaatgatcttagttgatcatcctaatgtcctcaaatcgcattgttcctttgttagtgatcataatttgtgggttgtcatgccattcatggccgggggttcttgtcttcacattttgaaagctgcataccctgatggttttgaggaagtagttatagccactatattacgcgagattttgaagggtttagagtatctgcatcatcatggccacattcatcgagatgtcaaagctgggaatattttgattgattcacgcggtgcaatcaaacttggagactttggcgtctctgcttgcctttttgataacggtgataggcaacggatgcggaatacatttgtgggaacaccttgttggatggcaccagaggttatggagcaactacatggttatgatttcaaggctgacatctggtcttttggtataactgcattggagcttgcccatgggcatgctcctttctcaaagtatcctccaatgaaggtactgcttatgaccttgcaaaatgcaccgcctggtcttgattatgaaagggataggaaattctccaagtcttttaagcaaatgattgctagttgcttggtaaaggatccttcaaaacgaccttctgccaagaagttgctgaagcattctttcttcaagcaagctcggtcaaatgattatattgcacgaacacttctagaggggctgcccgctcttggtgatcgcattaaggaattaaagagaaaggaagaatatatgcttgcccaaaagaaaatgccagatggtcaaaaggaggaactttcgcagaatgaatacaaaagaggaattagtggttggaacttcaatcttgaggatatgaaggctcaagcttctctgatccaggatgttgatgagcctactcctgatagtagtcagatggggagttctaactctctgagtactcttgatacgcaacaaaagcaatcacaatgtcaaaacttatacccagttgcagatacggaagataatgatgtgattccgaaccaacaagcttctcttgcatttgttaacacgactttttacgatgccagagttagaaatgacaaatcggatgatgactctagcatagccagttctggccatgaactacatatgtcaaggaattcttcacctcatagccttgaaagcaatttgagtgaaaagcctaatgtagataacattggaagaatgatggatcctatggctgggaatactcatcataaaaggcaattctcaacaggcacaaatactgatgaactagatgagaaagcaaaggcaccagttgttcagcagaaaggacgcttcaaagtcacatcagagaatgttgaactggaaaaggttgtttcagtcgttcctattcctttattgcaaaagagtcacagcttgcaggtgattagcatgaatcccgcaaattctctgcaatcagctcttccatcacccttaccaccatcaccactaacatcaccttctgatgtcatctcaccagctctttcgggctattctcttttccctctgttaaactctattttgcagacaaatattatacaaagggagaatattcttactttaatgaagcaaattgctcctggagatttcacagccaaccgttcagcggatggaggatccacccaggctactaatgggatagagaaacctttgcttcaagctaatgaaagggagacggagttagttaatgaaatatctgagttgcataagaggctcatgattgcccaagacgagctacaaaaattaaaattagatccggcttaa

Protein Analysis

650

Amino Acids

72.54

Weight (kDa)

6.14

Isoelectric Point (pI)

52.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1561
AasI GACNNNNNNGTC 1 cut(s) 467
Acc36I ACCTGC 1 cut(s) 1561
AccB1I GGYRCC 2 cut(s) 544, 1459
AccBSI CCGCTC 1 cut(s) 878
AccII CGCG 2 cut(s) 354, 441
AciI CCGC 6 cut(s) 441, 511, 695, 876, 1590, 1796
AclWI GGATC 8 cut(s) 767, 780, 1036, 1373, 1386, 1800, 1813, 1937
AcoI YGGCCR 4 cut(s) 58, 273, 391, 1282
AcsI RAATTY 3 cut(s) 725, 1306, 1594
AcuI CTGAAG 1 cut(s) 827
AcvI CACGTG 1 cut(s) 173
AcyI GRCGYC 1 cut(s) 468
AdeI CACNNNGTG 1 cut(s) 443
AfaI GTAC 3 cut(s) 81, 669, 1105
AfiI CCNNNNNNNGG 3 cut(s) 881, 1388, 1795
AhdI GACNNNNNGTC 1 cut(s) 595
AjnI CCWGG 4 cut(s) 697, 1044, 1768, 1812
AjuI GAANNNNNNNTTGG 4 cut(s) 520, 552, 982, 1014
Alw21I GWGCWC 1 cut(s) 36
Alw26I GTCTC 3 cut(s) 453, 475, 1856
AlwI GGATC 8 cut(s) 767, 780, 1036, 1373, 1386, 1800, 1813, 1937
Ama87I CYCGRG 1 cut(s) 29
AoxI GGCC 4 cut(s) 58, 273, 391, 1282
ApeKI GCWGC 2 cut(s) 305, 871
ApoI RAATTY 3 cut(s) 725, 1306, 1594
AspLEI GCGC 2 cut(s) 74, 181
AspS9I GGNCC 1 cut(s) 26
AsuC2I CCSGG 1 cut(s) 277
AsuHPI GGTGA 8 cut(s) 506, 896, 1305, 1585, 1611, 1626, 1638, 1656
AsuII TTCGAA 1 cut(s) 138
AvaI CYCGRG 1 cut(s) 29
AvaII GGWCC 1 cut(s) 26
BalI TGGCCA 2 cut(s) 393, 1284
BamHI GGATCC 3 cut(s) 772, 1378, 1805
BanI GGYRCC 2 cut(s) 544, 1459
BbrPI CACGTG 1 cut(s) 173
BbsI GAAGAC 1 cut(s) 281
Bbv12I GWGCWC 1 cut(s) 36
BbvI GCAGC 2 cut(s) 292, 858
BccI CCATC 9 cut(s) 128, 311, 535, 941, 1075, 1369, 1624, 1639, 1793
BciT130I CCWGG 4 cut(s) 699, 1046, 1770, 1814
BciVI GTATCC 1 cut(s) 663
BclI TGATCA 2 cut(s) 199, 241
BcnI CCSGG 1 cut(s) 277
BcoDI GTCTC 3 cut(s) 453, 475, 1856
BfaI CTAG 4 cut(s) 756, 863, 1266, 1442
BfoI RGCGCY 1 cut(s) 75
BfuAI ACCTGC 1 cut(s) 1561
BfuI GTATCC 1 cut(s) 663
BisI GCNGC 2 cut(s) 306, 872
BlsI GCNGC 2 cut(s) 307, 873
BmcAI AGTACT 1 cut(s) 1105
Bme1390I CCNGG 5 cut(s) 277, 699, 1046, 1770, 1814
Bme18I GGWCC 1 cut(s) 26
BmeRI GACNNNNNGTC 1 cut(s) 595
BmeT110I CYCGRG 1 cut(s) 29
BmgT120I GGNCC 1 cut(s) 26
BmiI GGNNCC 6 cut(s) 28, 546, 774, 1380, 1461, 1807
BmrFI CCNGG 5 cut(s) 277, 699, 1046, 1770, 1814
BmrI ACTGGG 1 cut(s) 1145
BmsI GCATC 3 cut(s) 391, 498, 1219
BmuI ACTGGG 1 cut(s) 1145
BpiI GAAGAC 1 cut(s) 281
BpmI CTGGAG 1 cut(s) 1791
Bpu14I TTCGAA 1 cut(s) 138
BpuEI CTTGAG 2 cut(s) 1014, 1034
BpuMI CCSGG 1 cut(s) 277
BsaAI YACGTR 1 cut(s) 173
BsaHI GRCGYC 1 cut(s) 468
BsaJI CCNNGG 4 cut(s) 61, 276, 628, 1812
BsaXI ACNNNNNCTCC 2 cut(s) 1853, 1883
Bsc4I CCNNNNNNNGG 3 cut(s) 881, 1388, 1795
Bse1I ACTGG 4 cut(s) 1151, 1275, 1463, 1518
BseBI CCWGG 4 cut(s) 699, 1046, 1770, 1814
BseDI CCNNGG 4 cut(s) 61, 276, 628, 1812
BseGI GGATG 6 cut(s) 202, 513, 546, 1054, 1261, 1804
BseLI CCNNNNNNNGG 3 cut(s) 881, 1388, 1795
BseMII CTCAG 2 cut(s) 1091, 1878
BseNI ACTGG 4 cut(s) 1151, 1275, 1463, 1518
BseRI GAGGAG 1 cut(s) 65
BseXI GCAGC 2 cut(s) 292, 858
BseYI CCCAGC 2 cut(s) 416, 1388
Bsh1236I CGCG 2 cut(s) 354, 441
BshFI GGCC 4 cut(s) 60, 275, 393, 1284
BshNI GGYRCC 2 cut(s) 544, 1459
BsiHKAI GWGCWC 1 cut(s) 36
BsiHKCI CYCGRG 1 cut(s) 29
BsiSI CCGG 2 cut(s) 276, 1946
BslI CCNNNNNNNGG 3 cut(s) 881, 1388, 1795
BsmAI GTCTC 3 cut(s) 453, 475, 1856
BsmBI CGTCTC 2 cut(s) 475, 1856
BsmI GAATGC 1 cut(s) 811
BsnI GGCC 4 cut(s) 60, 275, 393, 1284
BsoBI CYCGRG 1 cut(s) 29
Bsp119I TTCGAA 1 cut(s) 138
Bsp1286I GDGCHC 1 cut(s) 36
Bsp19I CCATGG 1 cut(s) 628
BspACI CCGC 6 cut(s) 441, 511, 695, 876, 1590, 1796
BspANI GGCC 4 cut(s) 60, 275, 393, 1284
BspCNI CTCAG 2 cut(s) 1092, 1879
BspFNI CGCG 2 cut(s) 354, 441
BspHI TCATGA 1 cut(s) 1905
BspLI GGNNCC 6 cut(s) 28, 546, 774, 1380, 1461, 1807
BspMI ACCTGC 1 cut(s) 1561
BspPI GGATC 8 cut(s) 767, 780, 1036, 1373, 1386, 1800, 1813, 1937
BspQI GCTCTTC 1 cut(s) 1617
BspT104I TTCGAA 1 cut(s) 138
BspT107I GGYRCC 2 cut(s) 544, 1459
BsrBI CCGCTC 1 cut(s) 878
BsrI ACTGG 4 cut(s) 1151, 1275, 1463, 1518
BssECI CCNNGG 4 cut(s) 61, 276, 628, 1812
BssNI GRCGYC 1 cut(s) 468
BssT1I CCWWGG 2 cut(s) 61, 628
Bst2UI CCWGG 4 cut(s) 699, 1046, 1770, 1814
Bst4CI ACNGT 3 cut(s) 86, 494, 1790
Bst6I CTCTTC 1 cut(s) 1617
BstACI GRCGYC 1 cut(s) 468
BstAPI GCANNNNNTGC 1 cut(s) 508
BstBAI YACGTR 1 cut(s) 173
BstBI TTCGAA 1 cut(s) 138
BstC8I GCNNGC 7 cut(s) 478, 624, 636, 828, 876, 927, 1568
BstDEI CTNAG 3 cut(s) 193, 1100, 1887
BstDSI CCRYGG 1 cut(s) 628
BstF5I GGATG 6 cut(s) 202, 513, 546, 1054, 1261, 1804
BstFNI CGCG 2 cut(s) 354, 441
BstH2I RGCGCY 1 cut(s) 75
BstHHI GCGC 2 cut(s) 74, 181
BstMAI GTCTC 3 cut(s) 453, 475, 1856
BstMWI GCNNNNNNNGC 6 cut(s) 40, 508, 1123, 1202, 1329, 1900
BstNI CCWGG 4 cut(s) 699, 1046, 1770, 1814
BstNSI RCATGY 1 cut(s) 638
BstSCI CCNGG 5 cut(s) 275, 697, 1044, 1768, 1812
BstUI CGCG 2 cut(s) 354, 441
BstV1I GCAGC 2 cut(s) 292, 858
BstV2I GAAGAC 1 cut(s) 281
BstX2I RGATCY 4 cut(s) 772, 1378, 1805, 1942
BstYI RGATCY 4 cut(s) 772, 1378, 1805, 1942
BsuI GTATCC 1 cut(s) 663
BsuRI GGCC 4 cut(s) 60, 275, 393, 1284
BtgI CCRYGG 1 cut(s) 628
BtsCI GGATG 6 cut(s) 202, 513, 546, 1054, 1261, 1804
BveI ACCTGC 1 cut(s) 1561
Cac8I GCNNGC 7 cut(s) 478, 624, 636, 828, 876, 927, 1568
CciI TCATGA 1 cut(s) 1905
CfoI GCGC 2 cut(s) 74, 181
Cfr13I GGNCC 1 cut(s) 26
CseI GACGC 2 cut(s) 457, 1491
Csp6I GTAC 3 cut(s) 80, 668, 1104
CviAII CATG 9 cut(s) 262, 271, 389, 569, 629, 635, 1286, 1582, 1906
CviQI GTAC 3 cut(s) 80, 668, 1104
DdeI CTNAG 3 cut(s) 193, 1100, 1887
DraIII CACNNNGTG 1 cut(s) 443
DrdI GACNNNNNNGTC 1 cut(s) 467
DriI GACNNNNNGTC 1 cut(s) 595
DseDI GACNNNNNNGTC 1 cut(s) 467
EaeI YGGCCR 4 cut(s) 58, 273, 391, 1282
Eam1104I CTCTTC 1 cut(s) 1617
Eam1105I GACNNNNNGTC 1 cut(s) 595
EarI CTCTTC 1 cut(s) 1617
Eco130I CCWWGG 2 cut(s) 61, 628
Eco47I GGWCC 1 cut(s) 26
Eco57I CTGAAG 1 cut(s) 827
Eco72I CACGTG 1 cut(s) 173
Eco88I CYCGRG 1 cut(s) 29
EcoO109I RGGNCCY 1 cut(s) 26
EcoRI GAATTC 1 cut(s) 1306
EcoRII CCWGG 4 cut(s) 697, 1044, 1768, 1812
EcoT14I CCWWGG 2 cut(s) 61, 628
ErhI CCWWGG 2 cut(s) 61, 628
Esp3I CGTCTC 2 cut(s) 475, 1856
FaeI CATG 9 cut(s) 265, 274, 392, 572, 632, 638, 1289, 1585, 1909
FalI AAGNNNNNCTT 4 cut(s) 1185, 1217, 1294, 1326
FatI CATG 9 cut(s) 261, 270, 388, 568, 628, 634, 1285, 1581, 1905
FauI CCCGC 2 cut(s) 883, 1597
FauNDI CATATG 1 cut(s) 1296
FbaI TGATCA 2 cut(s) 199, 241
Fnu4HI GCNGC 2 cut(s) 306, 872
FokI GGATG 6 cut(s) 189, 520, 553, 1061, 1268, 1811
Fsp4HI GCNGC 2 cut(s) 306, 872
FspBI CTAG 4 cut(s) 756, 863, 1266, 1442
GlaI GCGC 2 cut(s) 73, 180
GluI GCNGC 2 cut(s) 306, 872
GsaI CCCAGC 2 cut(s) 420, 1392
GsuI CTGGAG 1 cut(s) 1791
HaeII RGCGCY 1 cut(s) 75
HaeIII GGCC 4 cut(s) 60, 275, 393, 1284
HapII CCGG 2 cut(s) 276, 1946
HgaI GACGC 2 cut(s) 457, 1491
HhaI GCGC 2 cut(s) 74, 181
Hin1I GRCGYC 1 cut(s) 468
Hin1II CATG 9 cut(s) 265, 274, 392, 572, 632, 638, 1289, 1585, 1909
Hin6I GCGC 2 cut(s) 72, 179
HinP1I GCGC 2 cut(s) 72, 179
HincII GTYRAC 1 cut(s) 1213
HindII GTYRAC 1 cut(s) 1213
HindIII AAGCTT 2 cut(s) 1032, 1194
HinfI GANTC 5 cut(s) 434, 1180, 1262, 1558, 1585
HpaI GTTAAC 1 cut(s) 1213
HpaII CCGG 2 cut(s) 276, 1946
HphI GGTGA 8 cut(s) 506, 896, 1305, 1585, 1611, 1626, 1638, 1656
Hpy166II GTNNAC 2 cut(s) 82, 1213
Hpy188III TCNNGA 7 cut(s) 404, 704, 863, 1013, 1067, 1109, 1906
Hpy8I GTNNAC 2 cut(s) 82, 1213
HpyAV CCTTC 7 cut(s) 112, 358, 658, 786, 798, 1018, 1659
HpyCH4III ACNGT 3 cut(s) 86, 494, 1790
HpyCH4IV ACGT 1 cut(s) 172
HpyF10VI GCNNNNNNNGC 6 cut(s) 40, 508, 1123, 1202, 1329, 1900
HpyF3I CTNAG 3 cut(s) 193, 1100, 1887
HpySE526I ACGT 1 cut(s) 172
Hsp92I GRCGYC 1 cut(s) 468
Hsp92II CATG 9 cut(s) 265, 274, 392, 572, 632, 638, 1289, 1585, 1909
HspAI GCGC 2 cut(s) 72, 179
Ksp22I TGATCA 2 cut(s) 199, 241
KspAI GTTAAC 1 cut(s) 1213
LguI GCTCTTC 1 cut(s) 1617
LmnI GCTCC 4 cut(s) 559, 619, 643, 1771
Lsp1109I GCAGC 2 cut(s) 292, 858
LweI GCATC 3 cut(s) 391, 498, 1219
MaeI CTAG 4 cut(s) 756, 863, 1266, 1442
MaeII ACGT 1 cut(s) 172
MaeIII GTNAC 2 cut(s) 1492, 1559
MbiI CCGCTC 1 cut(s) 878
MboII GAAGA 9 cut(s) 19, 22, 281, 811, 926, 1178, 1302, 1380, 1604
MflI RGATCY 4 cut(s) 772, 1378, 1805, 1942
MhlI GDGCHC 1 cut(s) 36
MlsI TGGCCA 2 cut(s) 393, 1284
MluNI TGGCCA 2 cut(s) 393, 1284
MlyI GAGTC 2 cut(s) 1256, 1567
MmeI TCCRAC 2 cut(s) 518, 980
Mox20I TGGCCA 2 cut(s) 393, 1284
MscI TGGCCA 2 cut(s) 393, 1284
MseI TTAA 9 cut(s) 741, 894, 902, 1212, 1700, 1751, 1875, 1934, 1951
MslI CAYNNNNRTG 5 cut(s) 207, 387, 405, 573, 633
Msp20I TGGCCA 2 cut(s) 393, 1284
MspA1I CMGCKG 1 cut(s) 1796
MspI CCGG 2 cut(s) 276, 1946
MspR9I CCNGG 5 cut(s) 277, 699, 1046, 1770, 1814
Mva1269I GAATGC 1 cut(s) 811
MvaI CCWGG 4 cut(s) 699, 1046, 1770, 1814
MvnI CGCG 2 cut(s) 354, 441
MwoI GCNNNNNNNGC 6 cut(s) 40, 508, 1123, 1202, 1329, 1900
NciI CCSGG 1 cut(s) 277
NcoI CCATGG 1 cut(s) 628
NdeI CATATG 1 cut(s) 1296
NlaIII CATG 9 cut(s) 265, 274, 392, 572, 632, 638, 1289, 1585, 1909
NlaIV GGNNCC 6 cut(s) 28, 546, 774, 1380, 1461, 1807
NmuCI GTSAC 2 cut(s) 1492, 1559
NspI RCATGY 1 cut(s) 638
NspV TTCGAA 1 cut(s) 138
PaeI GCATGC 1 cut(s) 638
PagI TCATGA 1 cut(s) 1905
PaqCI CACCTGC 1 cut(s) 1561
PciSI GCTCTTC 1 cut(s) 1617
PctI GAATGC 1 cut(s) 811
PfeI GAWTC 3 cut(s) 434, 1180, 1585
PfoI TCCNGGA 2 cut(s) 1044, 1768
PkrI GCNGC 2 cut(s) 307, 873
PleI GAGTC 2 cut(s) 1256, 1566
PmaCI CACGTG 1 cut(s) 173
PmlI CACGTG 1 cut(s) 173
PpsI GAGTC 2 cut(s) 1256, 1566
Ppu21I YACGTR 1 cut(s) 173
PpuMI RGGWCCY 1 cut(s) 26
Psp5II RGGWCCY 1 cut(s) 26
Psp6I CCWGG 4 cut(s) 697, 1044, 1768, 1812
PspCI CACGTG 1 cut(s) 173
PspFI CCCAGC 2 cut(s) 416, 1388
PspGI CCWGG 4 cut(s) 697, 1044, 1768, 1812
PspN4I GGNNCC 6 cut(s) 28, 546, 774, 1380, 1461, 1807
PspPI GGNCC 1 cut(s) 26
PspPPI RGGWCCY 1 cut(s) 26
PsuI RGATCY 4 cut(s) 772, 1378, 1805, 1942
RsaI GTAC 3 cut(s) 81, 669, 1105
RsaNI GTAC 3 cut(s) 80, 668, 1104
RseI CAYNNNNRTG 5 cut(s) 207, 387, 405, 573, 633
SapI GCTCTTC 1 cut(s) 1617
SaqAI TTAA 9 cut(s) 741, 894, 902, 1212, 1700, 1751, 1875, 1934, 1951
SatI GCNGC 2 cut(s) 306, 872
Sau96I GGNCC 1 cut(s) 26
ScaI AGTACT 1 cut(s) 1105
SchI GAGTC 2 cut(s) 1256, 1567
ScrFI CCNGG 5 cut(s) 277, 699, 1046, 1770, 1814
SduI GDGCHC 1 cut(s) 36
SfaNI GCATC 3 cut(s) 391, 498, 1219
SfuI TTCGAA 1 cut(s) 138
SinI GGWCC 1 cut(s) 26
SmiMI CAYNNNNRTG 5 cut(s) 207, 387, 405, 573, 633
SmlI CTYRAG 2 cut(s) 1013, 1029
SmoI CTYRAG 2 cut(s) 1013, 1029
SphI GCATGC 1 cut(s) 638
SsiI CCGC 6 cut(s) 441, 511, 695, 876, 1590, 1796
SspI AATATT 3 cut(s) 424, 1723, 1741
SspMI CTAG 4 cut(s) 756, 863, 1266, 1442
StyD4I CCNGG 5 cut(s) 275, 697, 1044, 1768, 1812
StyI CCWWGG 2 cut(s) 61, 628
TaaI ACNGT 3 cut(s) 86, 494, 1790
TaiI ACGT 1 cut(s) 175
TaqI TCGA 3 cut(s) 132, 138, 403
TaqII GACCGA 1 cut(s) 822
TatI WGTACW 1 cut(s) 1103
TfiI GAWTC 3 cut(s) 434, 1180, 1585
Tru1I TTAA 9 cut(s) 741, 894, 902, 1212, 1700, 1751, 1875, 1934, 1951
Tru9I TTAA 9 cut(s) 741, 894, 902, 1212, 1700, 1751, 1875, 1934, 1951
TseFI GTSAC 2 cut(s) 1492, 1559
TseI GCWGC 2 cut(s) 305, 871
Tsp45I GTSAC 2 cut(s) 1492, 1559
TspGWI ACGGA 4 cut(s) 67, 520, 1178, 1880
VpaK11BI GGWCC 1 cut(s) 26
XapI RAATTY 3 cut(s) 725, 1306, 1594
XbaI TCTAGA 1 cut(s) 862
XceI RCATGY 1 cut(s) 638
XcmI CCANNNNNNNNNTGG 1 cut(s) 1820
XspI CTAG 4 cut(s) 756, 863, 1266, 1442
ZrmI AGTACT 1 cut(s) 1105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.