Rorug02G0299800

Serine/Threonine protein kinases, catalytic domain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
33467706 .. 33468149
444 bp
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UTR
Exon/CDS
Intron
Rorug02G0299800.1

Sequence Viewer

Length: 333 bp
ATGGATGCAGAACCTTATGCGAGGTGCACGTATATGTTTGAGACGATCATGTTCGTTCTTGATATGAAGCATACGTTTAATGATATTGTGAGGGAGGTCTCTGTGGGTTTTAATCATTTGAATCTTGGTTCATTCGACTTGAGGGATTCTAATGGGAGCACCATTTTGGTGCCTTATTGTCGTGGGAGTAGTAGTTCTACTTCTGCAACAACATCTTTGGATGATGTTTCATGTGCTTCTTCATGTTTGTCAGTGGGTTCAAGCAATATTATTGATGTGAATGAATACTTGGGGTGTTATAGGCCAGATAGGGGTCATCATGGGCCGGGCTAG

Protein Analysis

110

Amino Acids

12.01

Weight (kDa)

4.88

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 169
AfiI CCNNNNNNNGG 1 cut(s) 311
AgsI TTSAA 2 cut(s) 121, 261
AjuI GAANNNNNNNTTGG 2 cut(s) 272, 304
AloI GAACNNNNNNTCC 2 cut(s) 178, 210
Alw21I GWGCWC 2 cut(s) 29, 161
Alw26I GTCTC 2 cut(s) 35, 103
Alw44I GTGCAC 1 cut(s) 25
AoxI GGCC 2 cut(s) 302, 323
ApaLI GTGCAC 1 cut(s) 25
AspS9I GGNCC 1 cut(s) 323
AsuC2I CCSGG 1 cut(s) 327
BaeGI GKGCMC 1 cut(s) 29
BanI GGYRCC 1 cut(s) 169
BarI GAAGNNNNNNTAC 2 cut(s) 184, 216
Bbv12I GWGCWC 2 cut(s) 29, 161
BcnI CCSGG 1 cut(s) 327
BcoDI GTCTC 2 cut(s) 35, 103
BfaI CTAG 1 cut(s) 331
Bme1390I CCNGG 1 cut(s) 327
BmgT120I GGNCC 1 cut(s) 323
BmiI GGNNCC 1 cut(s) 171
BmrFI CCNGG 1 cut(s) 327
BpuEI CTTGAG 1 cut(s) 160
BpuMI CCSGG 1 cut(s) 327
BsaAI YACGTR 1 cut(s) 30
BsaI GGTCTC 1 cut(s) 103
BsaXI ACNNNNNCTCC 2 cut(s) 178, 208
Bsc4I CCNNNNNNNGG 1 cut(s) 311
BseGI GGATG 2 cut(s) 10, 226
BseLI CCNNNNNNNGG 1 cut(s) 311
BseSI GKGCMC 1 cut(s) 29
BshFI GGCC 2 cut(s) 304, 325
BshNI GGYRCC 1 cut(s) 169
BsiHKAI GWGCWC 2 cut(s) 29, 161
BsiSI CCGG 1 cut(s) 326
BslI CCNNNNNNNGG 1 cut(s) 311
BsmAI GTCTC 2 cut(s) 35, 103
BsmBI CGTCTC 1 cut(s) 35
BsnI GGCC 2 cut(s) 304, 325
Bso31I GGTCTC 1 cut(s) 103
Bsp1286I GDGCHC 2 cut(s) 29, 161
Bsp143I GATC 1 cut(s) 45
BspANI GGCC 2 cut(s) 304, 325
BspLI GGNNCC 1 cut(s) 171
BspT107I GGYRCC 1 cut(s) 169
BspTNI GGTCTC 1 cut(s) 103
BssMI GATC 1 cut(s) 45
BstBAI YACGTR 1 cut(s) 30
BstF5I GGATG 2 cut(s) 10, 226
BstKTI GATC 1 cut(s) 48
BstMAI GTCTC 2 cut(s) 35, 103
BstMBI GATC 1 cut(s) 45
BstSCI CCNGG 1 cut(s) 325
BstSLI GKGCMC 1 cut(s) 29
BsuRI GGCC 2 cut(s) 304, 325
BtsCI GGATG 2 cut(s) 10, 226
BtsIMutI CAGTG 1 cut(s) 258
Cfr13I GGNCC 1 cut(s) 323
CviAII CATG 4 cut(s) 49, 231, 243, 320
CviJI RGCY 3 cut(s) 304, 325, 330
CviKI_1 RGCY 3 cut(s) 304, 325, 330
DpnI GATC 1 cut(s) 47
DpnII GATC 1 cut(s) 45
Eco31I GGTCTC 1 cut(s) 103
Esp3I CGTCTC 1 cut(s) 35
FaeI CATG 4 cut(s) 52, 234, 246, 323
FatI CATG 4 cut(s) 48, 230, 242, 319
FokI GGATG 2 cut(s) 17, 233
FspBI CTAG 1 cut(s) 331
HaeIII GGCC 2 cut(s) 304, 325
HapII CCGG 1 cut(s) 326
Hin1II CATG 4 cut(s) 52, 234, 246, 323
HinfI GANTC 2 cut(s) 121, 146
HpaII CCGG 1 cut(s) 326
Hpy166II GTNNAC 1 cut(s) 27
Hpy188III TCNNGA 1 cut(s) 59
Hpy8I GTNNAC 1 cut(s) 27
HpyCH4IV ACGT 2 cut(s) 29, 74
HpyCH4V TGCA 3 cut(s) 8, 27, 206
HpySE526I ACGT 2 cut(s) 29, 74
Hsp92II CATG 4 cut(s) 52, 234, 246, 323
Kzo9I GATC 1 cut(s) 45
LmnI GCTCC 1 cut(s) 156
LpnPI CCDG 1 cut(s) 318
MaeI CTAG 1 cut(s) 331
MaeII ACGT 2 cut(s) 29, 74
MalI GATC 1 cut(s) 47
MboI GATC 1 cut(s) 45
MboII GAAGA 1 cut(s) 231
MhlI GDGCHC 2 cut(s) 29, 161
MnlI CCTC 4 cut(s) 15, 84, 88, 135
MseI TTAA 2 cut(s) 78, 111
MslI CAYNNNNRTG 2 cut(s) 32, 167
MspI CCGG 1 cut(s) 326
MspR9I CCNGG 1 cut(s) 327
NciI CCSGG 1 cut(s) 327
NdeII GATC 1 cut(s) 45
NlaIII CATG 4 cut(s) 52, 234, 246, 323
NlaIV GGNNCC 1 cut(s) 171
PfeI GAWTC 2 cut(s) 121, 146
Ppu21I YACGTR 1 cut(s) 30
PspN4I GGNNCC 1 cut(s) 171
PspPI GGNCC 1 cut(s) 323
RseI CAYNNNNRTG 2 cut(s) 32, 167
SaqAI TTAA 2 cut(s) 78, 111
Sau3AI GATC 1 cut(s) 45
Sau96I GGNCC 1 cut(s) 323
ScrFI CCNGG 1 cut(s) 327
SduI GDGCHC 2 cut(s) 29, 161
SetI ASST 5 cut(s) 16, 26, 32, 77, 99
SmiMI CAYNNNNRTG 2 cut(s) 32, 167
SmlI CTYRAG 1 cut(s) 139
SmoI CTYRAG 1 cut(s) 139
SspI AATATT 1 cut(s) 268
SspMI CTAG 1 cut(s) 331
StyD4I CCNGG 1 cut(s) 325
TaiI ACGT 2 cut(s) 32, 77
TaqI TCGA 1 cut(s) 135
TfiI GAWTC 2 cut(s) 121, 146
Tru1I TTAA 2 cut(s) 78, 111
Tru9I TTAA 2 cut(s) 78, 111
TscAI CASTG 1 cut(s) 258
TspDTI ATGAA 5 cut(s) 80, 120, 219, 231, 297
TspRI CASTG 1 cut(s) 258
VneI GTGCAC 1 cut(s) 25
XspI CTAG 1 cut(s) 331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.