Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003401

Physical Location & Seq

Genomic Coordinates Forward (+)

37864638 .. 37875302

Gene Structure 10665 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00112600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGAGAAGAAGAAGTATCCGATAGGACCCGAGCACTACACGCTCTACGAGGAGGTCGGCCAAGGTGTAAGCGCCTCCGTACACCGTGCTGTATGTAAGCCCTTCAATGAGGTTGTTGCCATCAAAATCCTCGACTTCGAAAGAGATAATTGTGATCTGAATAATATATCACGTGAAGCGCAAACAATGATCCTAGTTGATCATCCTAATGTCCTCAAATCGCATTGTTCCTTTGTTAGCGATCATAATTTGTGGGTTGTCATGCCATTCATGGCCGGGGGTTCTTGTCTTCACATTTTGAAAGCTGCATACCCTGATGGTTTTGAGGAAGTAGTTATAGCCACTATATTACGCGAGATTTTGAAGGGTTTAGAGTATCTGCACCATCATGGCCACATTCATCGAGATGTCAAAGCTGGGAATATTTTGATTGATTCACGCGGTGCAATCAAGCTTGGAGACTTCGGTGTCTCTGCTTGCCTTTTTGATAACGGTGATAGGCAACGGATGCGGAATACATTTGTGGGAACACCTTGTTGGATGGCACCAGAGGTTATGGAGCAACTACATGGTTATGATTTCAAGGCTGACATCTGGTCTTTTGGTATAACTGCATTGGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAGTATCCTCCAATGAAGGTACTGCTTATGACCTTGCAAAATGCACCGCCTGGTCTTGATTATGAAAGGGACAGGAAATTCTCCAAGTCTTTTAAGCAAATGATTGCTAGTTGCTTGGTAAAGGATCCTTCAAAACGACCTTCTGCCAAGAAGTTGCTGAAGCATTCTTTCTTCAAGCAAGCTCGGTCAAATGATTATATTGCACGAACACTTCTGGAGGGGCTGCCCGCTCTTGGTGATCGCATTAAGGAATTAAAGAATGAATACAAAAGAGGAATTAGTGGTTGGAACTTCAATCTTGAGGATATGAAGGCTCAAGCTTCTCTGATCCAAGATGTTGATGAGCCTACTCCTGATAGTAGTCAGATGGGGAGTTCTAACTCTCTGAGTACTCTTGATACGCAACAAAAGCAATCACAATGTCAAAACTTATACCCAGTTGCAGATACGGAAGATAATGATGTGATTCCGAACCAACAAGCTTCTCTTGCATTTGTTAACACGACTTTTTATGATGCCAGAGTTAGAAATGACAAATCGGATGATGACTCTAGCATAGCCAGTTCTGGCCATGAACTACATATGTCAAGGAATTCTTCACCTCATAGCCTTGAAAGCAATTTGAGTGAAAAGCCTAATGTAGATAACATTGGAAGAATGATGGATACTATGGCTGGGAATACTCATCATAAAAGGCAATTCTCAACGGGCACAAATACTGAAGAACTAGATGAGAAAGCAAAGGCACCAGTTGTTCAGCAGAAAGGACGCTTCAAAGTCACATCCGAGAATGTTGAACTGGAAAAGGTTGTTCCTATTCCTTTATTGCAAAAGAGTCACAGCTTGCAGGTTCGTAGTTTTGAGGTGATTAGCATGAATCCCGCAAATTCTCTGCAATCAGCTCTTCCATCACCCTTACCACCATCACCACTAACATCACCTTCTGATGTCATCTCACCAGCTCTCTCGGGCTATTCTCTTTTCCCTTTGTTAAACTCTATTTTGCAGACAAATATTATACAAAGGGAGAATATTCTTACTTTAATGAAGCAAATTGCTCCCGGAGATTTCACAGCCAACCGTTCAGCTGATGGAGGATCCACCCAGGCTACTAATGGGCTAGAGAAACCTTTGCCTCAAGCTAATGAAAGGGAGACAGAGTTAGTTAATGAAATATCTGAGTTGCATAAGAGGCTCATGATTGCCCAAGACGAGCTACAAAAATTAAAATTAGATCCGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

630

Amino Acids

70.22

Weight (kDa)

6.14

Isoelectric Point (pI)

50.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	13 - 274	5.7e-61	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	14 - 270	4.6e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79640 AT1G79640 AT1G79640 AT1G79640 AT1G79640 AT1G79640
fragaria_vesca	FvH4_6g28050 FvH4_6g28050 FvH4_6g28050 FvH4_6g28050 FvH4_6g28050 FvH4_6g28050 FvH4_6g28050
malus_domestica	MD09G1229900.v1.1 MD17G1228700.v1.1
prunus_persica	Prupe.3G106100_v2.0.a1 Prupe.3G106100_v2.0.a1
pyrus_communis	pycom09g14840 pycom17g23120
rosa_chinensis	RchiOBHm_Chr2g0131781 RchiOBHm_Chr7g0213591
rosa_laevigata	RLG00000019211
rosa_multiflora	Rmu_sc0002589.1_g000040 Rmu_sc0009880.1_g000006
rosa_roxburghii	Rroxscaffold_2G00112600
rosa_rugosa	Rorug02G0299500 Rorug02G0299600 Rorug02G0299700 Rorug02G0299800
rosa_samantha	Rh1BG109800 Rh2AG352000 Rh2BG359100 Rh2CG337600 Rh2DG376500 Rh5CG277400
rosa_wichuraiana	Rw2G028610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	467
Acc36I	ACCTGC	1 cut(s)	1486
AccB1I	GGYRCC	2 cut(s)	544, 1393
AccBSI	CCGCTC	1 cut(s)	878
AccII	CGCG	2 cut(s)	354, 441
AciI	CCGC	5 cut(s)	441, 511, 695, 876, 1530
AclWI	GGATC	7 cut(s)	184, 767, 780, 970, 1740, 1753, 1877
AcoI	YGGCCR	4 cut(s)	58, 273, 391, 1216
AcsI	RAATTY	3 cut(s)	725, 1240, 1534
AcuI	CTGAAG	2 cut(s)	827, 1389
AcvI	CACGTG	1 cut(s)	173
AdeI	CACNNNGTG	1 cut(s)	443
AfaI	GTAC	3 cut(s)	81, 669, 1039
AfiI	CCNNNNNNNGG	1 cut(s)	881
AhdI	GACNNNNNGTC	1 cut(s)	595
AjnI	CCWGG	2 cut(s)	697, 1752
AjuI	GAANNNNNNNTTGG	4 cut(s)	520, 552, 916, 948
Alw21I	GWGCWC	1 cut(s)	36
Alw26I	GTCTC	3 cut(s)	453, 475, 1796
AlwI	GGATC	7 cut(s)	184, 767, 780, 970, 1740, 1753, 1877
Ama87I	CYCGRG	2 cut(s)	29, 1615
AoxI	GGCC	4 cut(s)	58, 273, 391, 1216
ApeKI	GCWGC	2 cut(s)	305, 871
ApoI	RAATTY	3 cut(s)	725, 1240, 1534
AspLEI	GCGC	2 cut(s)	74, 181
AspS9I	GGNCC	1 cut(s)	26
AsuC2I	CCSGG	2 cut(s)	277, 1710
AsuHPI	GGTGA	8 cut(s)	506, 896, 1239, 1525, 1551, 1566, 1578, 1596
AsuII	TTCGAA	1 cut(s)	138
AvaI	CYCGRG	2 cut(s)	29, 1615
AvaII	GGWCC	1 cut(s)	26
BaeGI	GKGCMC	1 cut(s)	1361
BalI	TGGCCA	2 cut(s)	393, 1218
BamHI	GGATCC	2 cut(s)	772, 1745
BanI	GGYRCC	2 cut(s)	544, 1393
BbrPI	CACGTG	1 cut(s)	173
BbsI	GAAGAC	1 cut(s)	281
Bbv12I	GWGCWC	1 cut(s)	36
BbvI	GCAGC	2 cut(s)	292, 858
BccI	CCATC	9 cut(s)	128, 311, 393, 535, 1009, 1303, 1564, 1579, 1733
BciT130I	CCWGG	2 cut(s)	699, 1754
BciVI	GTATCC	3 cut(s)	27, 663, 1306
BclI	TGATCA	1 cut(s)	199
BcnI	CCSGG	2 cut(s)	277, 1710
BcoDI	GTCTC	3 cut(s)	453, 475, 1796
BfaI	CTAG	5 cut(s)	194, 756, 1200, 1376, 1769
BfoI	RGCGCY	1 cut(s)	75
BfuAI	ACCTGC	1 cut(s)	1486
BfuI	GTATCC	3 cut(s)	27, 663, 1306
BisI	GCNGC	2 cut(s)	306, 872
BlsI	GCNGC	2 cut(s)	307, 873
BmcAI	AGTACT	1 cut(s)	1039
Bme1390I	CCNGG	4 cut(s)	277, 699, 1710, 1754
Bme18I	GGWCC	1 cut(s)	26
BmeRI	GACNNNNNGTC	1 cut(s)	595
BmeT110I	CYCGRG	2 cut(s)	29, 1615
BmgT120I	GGNCC	1 cut(s)	26
BmiI	GGNNCC	5 cut(s)	28, 546, 774, 1395, 1747
BmrFI	CCNGG	4 cut(s)	277, 699, 1710, 1754
BmrI	ACTGGG	1 cut(s)	1079
BmsI	GCATC	2 cut(s)	498, 1153
BmuI	ACTGGG	1 cut(s)	1079
BpiI	GAAGAC	1 cut(s)	281
BpmI	CTGGAG	1 cut(s)	884
Bpu14I	TTCGAA	1 cut(s)	138
BpuEI	CTTGAG	3 cut(s)	948, 968, 1770
BpuMI	CCSGG	2 cut(s)	277, 1710
BsaAI	YACGTR	1 cut(s)	173
BsaJI	CCNNGG	4 cut(s)	61, 276, 628, 1752
BsaXI	ACNNNNNCTCC	2 cut(s)	1793, 1823
Bsc4I	CCNNNNNNNGG	1 cut(s)	881
Bse1I	ACTGG	4 cut(s)	1085, 1209, 1397, 1452
BseBI	CCWGG	2 cut(s)	699, 1754
BseDI	CCNNGG	4 cut(s)	61, 276, 628, 1752
BseGI	GGATG	5 cut(s)	202, 513, 546, 1195, 1430
BseLI	CCNNNNNNNGG	1 cut(s)	881
BseMII	CTCAG	2 cut(s)	1025, 1818
BseNI	ACTGG	4 cut(s)	1085, 1209, 1397, 1452
BseRI	GAGGAG	1 cut(s)	65
BseSI	GKGCMC	1 cut(s)	1361
BseXI	GCAGC	2 cut(s)	292, 858
BseYI	CCCAGC	2 cut(s)	416, 1322
BsgI	GTGCAG	1 cut(s)	365
Bsh1236I	CGCG	2 cut(s)	354, 441
BshFI	GGCC	4 cut(s)	60, 275, 393, 1218
BshNI	GGYRCC	2 cut(s)	544, 1393
BsiHKAI	GWGCWC	1 cut(s)	36
BsiHKCI	CYCGRG	2 cut(s)	29, 1615
BsiSI	CCGG	3 cut(s)	276, 1710, 1886
BslFI	GGGAC	1 cut(s)	731
BslI	CCNNNNNNNGG	1 cut(s)	881
BsmAI	GTCTC	3 cut(s)	453, 475, 1796
BsmFI	GGGAC	1 cut(s)	731
BsmI	GAATGC	1 cut(s)	811
BsnI	GGCC	4 cut(s)	60, 275, 393, 1218
BsoBI	CYCGRG	2 cut(s)	29, 1615
Bsp119I	TTCGAA	1 cut(s)	138
Bsp1286I	GDGCHC	2 cut(s)	36, 1361
Bsp143I	GATC	9 cut(s)	154, 189, 199, 241, 772, 886, 975, 1745, 1882
Bsp19I	CCATGG	1 cut(s)	628
BspACI	CCGC	5 cut(s)	441, 511, 695, 876, 1530
BspANI	GGCC	4 cut(s)	60, 275, 393, 1218
BspCNI	CTCAG	2 cut(s)	1026, 1819
BspFNI	CGCG	2 cut(s)	354, 441
BspHI	TCATGA	1 cut(s)	1845
BspLI	GGNNCC	5 cut(s)	28, 546, 774, 1395, 1747
BspMI	ACCTGC	1 cut(s)	1486
BspPI	GGATC	7 cut(s)	184, 767, 780, 970, 1740, 1753, 1877
BspQI	GCTCTTC	1 cut(s)	1557
BspT104I	TTCGAA	1 cut(s)	138
BspT107I	GGYRCC	2 cut(s)	544, 1393
BsrBI	CCGCTC	1 cut(s)	878
BsrI	ACTGG	4 cut(s)	1085, 1209, 1397, 1452
BssECI	CCNNGG	4 cut(s)	61, 276, 628, 1752
BssMI	GATC	9 cut(s)	154, 189, 199, 241, 772, 886, 975, 1745, 1882
BssT1I	CCWWGG	2 cut(s)	61, 628
Bst2UI	CCWGG	2 cut(s)	699, 1754
Bst4CI	ACNGT	3 cut(s)	86, 494, 1730
Bst6I	CTCTTC	1 cut(s)	1557
BstAPI	GCANNNNNTGC	1 cut(s)	508
BstBAI	YACGTR	1 cut(s)	173
BstBI	TTCGAA	1 cut(s)	138
BstC8I	GCNNGC	5 cut(s)	478, 624, 828, 876, 1493
BstDEI	CTNAG	2 cut(s)	1034, 1827
BstDSI	CCRYGG	1 cut(s)	628
BstF5I	GGATG	5 cut(s)	202, 513, 546, 1195, 1430
BstFNI	CGCG	2 cut(s)	354, 441
BstH2I	RGCGCY	1 cut(s)	75
BstHHI	GCGC	2 cut(s)	74, 181
BstKTI	GATC	9 cut(s)	157, 192, 202, 244, 775, 889, 978, 1748, 1885
BstMAI	GTCTC	3 cut(s)	453, 475, 1796
BstMBI	GATC	9 cut(s)	154, 189, 199, 241, 772, 886, 975, 1745, 1882
BstMWI	GCNNNNNNNGC	6 cut(s)	40, 508, 1057, 1136, 1263, 1840
BstNI	CCWGG	2 cut(s)	699, 1754
BstSCI	CCNGG	4 cut(s)	275, 697, 1708, 1752
BstSLI	GKGCMC	1 cut(s)	1361
BstUI	CGCG	2 cut(s)	354, 441
BstV1I	GCAGC	2 cut(s)	292, 858
BstV2I	GAAGAC	1 cut(s)	281
BstX2I	RGATCY	3 cut(s)	772, 1745, 1882
BstYI	RGATCY	3 cut(s)	772, 1745, 1882
BsuI	GTATCC	3 cut(s)	27, 663, 1306
BsuRI	GGCC	4 cut(s)	60, 275, 393, 1218
BtgI	CCRYGG	1 cut(s)	628
BtsCI	GGATG	5 cut(s)	202, 513, 546, 1195, 1430
BveI	ACCTGC	1 cut(s)	1486
Cac8I	GCNNGC	5 cut(s)	478, 624, 828, 876, 1493
CciI	TCATGA	1 cut(s)	1845
CfoI	GCGC	2 cut(s)	74, 181
Cfr13I	GGNCC	1 cut(s)	26
CseI	GACGC	1 cut(s)	1425
Csp6I	GTAC	3 cut(s)	80, 668, 1038
CviAII	CATG	9 cut(s)	262, 271, 389, 569, 629, 635, 1220, 1522, 1846
CviQI	GTAC	3 cut(s)	80, 668, 1038
DdeI	CTNAG	2 cut(s)	1034, 1827
DpnI	GATC	9 cut(s)	156, 191, 201, 243, 774, 888, 977, 1747, 1884
DpnII	GATC	9 cut(s)	154, 189, 199, 241, 772, 886, 975, 1745, 1882
DraIII	CACNNNGTG	1 cut(s)	443
DrdI	GACNNNNNNGTC	1 cut(s)	467
DriI	GACNNNNNGTC	1 cut(s)	595
DseDI	GACNNNNNNGTC	1 cut(s)	467
EaeI	YGGCCR	4 cut(s)	58, 273, 391, 1216
Eam1104I	CTCTTC	1 cut(s)	1557
Eam1105I	GACNNNNNGTC	1 cut(s)	595
EarI	CTCTTC	1 cut(s)	1557
Eco130I	CCWWGG	2 cut(s)	61, 628
Eco47I	GGWCC	1 cut(s)	26
Eco57I	CTGAAG	2 cut(s)	827, 1389
Eco72I	CACGTG	1 cut(s)	173
Eco88I	CYCGRG	2 cut(s)	29, 1615
EcoO109I	RGGNCCY	1 cut(s)	26
EcoRI	GAATTC	1 cut(s)	1240
EcoRII	CCWGG	2 cut(s)	697, 1752
EcoT14I	CCWWGG	2 cut(s)	61, 628
ErhI	CCWWGG	2 cut(s)	61, 628
FaeI	CATG	9 cut(s)	265, 274, 392, 572, 632, 638, 1223, 1525, 1849
FalI	AAGNNNNNCTT	4 cut(s)	1119, 1151, 1228, 1260
FaqI	GGGAC	1 cut(s)	731
FatI	CATG	9 cut(s)	261, 270, 388, 568, 628, 634, 1219, 1521, 1845
FauI	CCCGC	2 cut(s)	883, 1537
FauNDI	CATATG	1 cut(s)	1230
FbaI	TGATCA	1 cut(s)	199
Fnu4HI	GCNGC	2 cut(s)	306, 872
FokI	GGATG	5 cut(s)	189, 520, 553, 1202, 1417
Fsp4HI	GCNGC	2 cut(s)	306, 872
FspBI	CTAG	5 cut(s)	194, 756, 1200, 1376, 1769
GlaI	GCGC	2 cut(s)	73, 180
GluI	GCNGC	2 cut(s)	306, 872
GsaI	CCCAGC	2 cut(s)	420, 1326
GsuI	CTGGAG	1 cut(s)	884
HaeII	RGCGCY	1 cut(s)	75
HaeIII	GGCC	4 cut(s)	60, 275, 393, 1218
HapII	CCGG	3 cut(s)	276, 1710, 1886
HgaI	GACGC	1 cut(s)	1425
HhaI	GCGC	2 cut(s)	74, 181
Hin1II	CATG	9 cut(s)	265, 274, 392, 572, 632, 638, 1223, 1525, 1849
Hin6I	GCGC	2 cut(s)	72, 179
HinP1I	GCGC	2 cut(s)	72, 179
HincII	GTYRAC	1 cut(s)	1147
HindII	GTYRAC	1 cut(s)	1147
HindIII	AAGCTT	3 cut(s)	452, 966, 1128
HinfI	GANTC	5 cut(s)	434, 1114, 1196, 1483, 1525
HpaI	GTTAAC	1 cut(s)	1147
HpaII	CCGG	3 cut(s)	276, 1710, 1886
HphI	GGTGA	8 cut(s)	506, 896, 1239, 1525, 1551, 1566, 1578, 1596
Hpy166II	GTNNAC	2 cut(s)	82, 1147
Hpy188III	TCNNGA	7 cut(s)	404, 704, 863, 947, 1001, 1043, 1846
Hpy8I	GTNNAC	2 cut(s)	82, 1147
HpyAV	CCTTC	7 cut(s)	112, 358, 658, 786, 798, 952, 1599
HpyCH4III	ACNGT	3 cut(s)	86, 494, 1730
HpyCH4IV	ACGT	1 cut(s)	172
HpyF10VI	GCNNNNNNNGC	6 cut(s)	40, 508, 1057, 1136, 1263, 1840
HpyF3I	CTNAG	2 cut(s)	1034, 1827
HpySE526I	ACGT	1 cut(s)	172
Hsp92II	CATG	9 cut(s)	265, 274, 392, 572, 632, 638, 1223, 1525, 1849
HspAI	GCGC	2 cut(s)	72, 179
Ksp22I	TGATCA	1 cut(s)	199
KspAI	GTTAAC	1 cut(s)	1147
Kzo9I	GATC	9 cut(s)	154, 189, 199, 241, 772, 886, 975, 1745, 1882
LguI	GCTCTTC	1 cut(s)	1557
LmnI	GCTCC	4 cut(s)	559, 619, 643, 1711
Lsp1109I	GCAGC	2 cut(s)	292, 858
LweI	GCATC	2 cut(s)	498, 1153
MaeI	CTAG	5 cut(s)	194, 756, 1200, 1376, 1769
MaeII	ACGT	1 cut(s)	172
MaeIII	GTNAC	2 cut(s)	1426, 1484
MalI	GATC	9 cut(s)	156, 191, 201, 243, 774, 888, 977, 1747, 1884
MbiI	CCGCTC	1 cut(s)	878
MboI	GATC	9 cut(s)	154, 189, 199, 241, 772, 886, 975, 1745, 1882
MboII	GAAGA	9 cut(s)	19, 22, 281, 811, 1112, 1236, 1314, 1382, 1544
MflI	RGATCY	3 cut(s)	772, 1745, 1882
MhlI	GDGCHC	2 cut(s)	36, 1361
MlsI	TGGCCA	2 cut(s)	393, 1218
MluNI	TGGCCA	2 cut(s)	393, 1218
MlyI	GAGTC	2 cut(s)	1190, 1492
MmeI	TCCRAC	2 cut(s)	518, 914
Mox20I	TGGCCA	2 cut(s)	393, 1218
MscI	TGGCCA	2 cut(s)	393, 1218
MseI	TTAA	9 cut(s)	741, 894, 902, 1146, 1640, 1691, 1815, 1874, 1891
MslI	CAYNNNNRTG	5 cut(s)	207, 387, 405, 573, 633
Msp20I	TGGCCA	2 cut(s)	393, 1218
MspA1I	CMGCKG	1 cut(s)	1736
MspI	CCGG	3 cut(s)	276, 1710, 1886
MspR9I	CCNGG	4 cut(s)	277, 699, 1710, 1754
Mva1269I	GAATGC	1 cut(s)	811
MvaI	CCWGG	2 cut(s)	699, 1754
MvnI	CGCG	2 cut(s)	354, 441
MwoI	GCNNNNNNNGC	6 cut(s)	40, 508, 1057, 1136, 1263, 1840
NciI	CCSGG	2 cut(s)	277, 1710
NcoI	CCATGG	1 cut(s)	628
NdeI	CATATG	1 cut(s)	1230
NdeII	GATC	9 cut(s)	154, 189, 199, 241, 772, 886, 975, 1745, 1882
NlaIII	CATG	9 cut(s)	265, 274, 392, 572, 632, 638, 1223, 1525, 1849
NlaIV	GGNNCC	5 cut(s)	28, 546, 774, 1395, 1747
NmuCI	GTSAC	2 cut(s)	1426, 1484
NspV	TTCGAA	1 cut(s)	138
PagI	TCATGA	1 cut(s)	1845
PciSI	GCTCTTC	1 cut(s)	1557
PctI	GAATGC	1 cut(s)	811
PfeI	GAWTC	3 cut(s)	434, 1114, 1525
PfoI	TCCNGGA	1 cut(s)	1708
PkrI	GCNGC	2 cut(s)	307, 873
PleI	GAGTC	2 cut(s)	1190, 1491
PmaCI	CACGTG	1 cut(s)	173
PmlI	CACGTG	1 cut(s)	173
PpsI	GAGTC	2 cut(s)	1190, 1491
Ppu21I	YACGTR	1 cut(s)	173
PpuMI	RGGWCCY	1 cut(s)	26
Psp5II	RGGWCCY	1 cut(s)	26
Psp6I	CCWGG	2 cut(s)	697, 1752
PspCI	CACGTG	1 cut(s)	173
PspFI	CCCAGC	2 cut(s)	416, 1322
PspGI	CCWGG	2 cut(s)	697, 1752
PspN4I	GGNNCC	5 cut(s)	28, 546, 774, 1395, 1747
PspPI	GGNCC	1 cut(s)	26
PspPPI	RGGWCCY	1 cut(s)	26
PsuI	RGATCY	3 cut(s)	772, 1745, 1882
PvuII	CAGCTG	1 cut(s)	1736
RsaI	GTAC	3 cut(s)	81, 669, 1039
RsaNI	GTAC	3 cut(s)	80, 668, 1038
RseI	CAYNNNNRTG	5 cut(s)	207, 387, 405, 573, 633
SapI	GCTCTTC	1 cut(s)	1557
SaqAI	TTAA	9 cut(s)	741, 894, 902, 1146, 1640, 1691, 1815, 1874, 1891
SatI	GCNGC	2 cut(s)	306, 872
Sau3AI	GATC	9 cut(s)	154, 189, 199, 241, 772, 886, 975, 1745, 1882
Sau96I	GGNCC	1 cut(s)	26
ScaI	AGTACT	1 cut(s)	1039
SchI	GAGTC	2 cut(s)	1190, 1492
ScrFI	CCNGG	4 cut(s)	277, 699, 1710, 1754
SduI	GDGCHC	2 cut(s)	36, 1361
SfaNI	GCATC	2 cut(s)	498, 1153
SfuI	TTCGAA	1 cut(s)	138
SinI	GGWCC	1 cut(s)	26
SmiMI	CAYNNNNRTG	5 cut(s)	207, 387, 405, 573, 633
SmlI	CTYRAG	3 cut(s)	947, 963, 1785
SmoI	CTYRAG	3 cut(s)	947, 963, 1785
SsiI	CCGC	5 cut(s)	441, 511, 695, 876, 1530
SspI	AATATT	3 cut(s)	424, 1663, 1681
SspMI	CTAG	5 cut(s)	194, 756, 1200, 1376, 1769
StyD4I	CCNGG	4 cut(s)	275, 697, 1708, 1752
StyI	CCWWGG	2 cut(s)	61, 628
TaaI	ACNGT	3 cut(s)	86, 494, 1730
TaiI	ACGT	1 cut(s)	175
TaqI	TCGA	3 cut(s)	132, 138, 403
TaqII	GACCGA	1 cut(s)	822
TatI	WGTACW	1 cut(s)	1037
TfiI	GAWTC	3 cut(s)	434, 1114, 1525
Tru1I	TTAA	9 cut(s)	741, 894, 902, 1146, 1640, 1691, 1815, 1874, 1891
Tru9I	TTAA	9 cut(s)	741, 894, 902, 1146, 1640, 1691, 1815, 1874, 1891
TseFI	GTSAC	2 cut(s)	1426, 1484
TseI	GCWGC	2 cut(s)	305, 871
Tsp45I	GTSAC	2 cut(s)	1426, 1484
TspGWI	ACGGA	3 cut(s)	67, 520, 1112
VpaK11BI	GGWCC	1 cut(s)	26
XapI	RAATTY	3 cut(s)	725, 1240, 1534
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1760
XspI	CTAG	5 cut(s)	194, 756, 1200, 1376, 1769
ZrmI	AGTACT	1 cut(s)	1039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.