Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010187.1

Orthogroup ID

OG0003728

Physical Location & Seq

Genomic Coordinates Forward (+)

8980 .. 12553

Gene Structure 3574 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010187.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

atgtttcagccaagcatgttcgacagccaccatatgagtatgctggacatgtcgaccctcaaaagctctgagagtgatatgggaaggagccgggatgatgattttgagacaaaatccggcactgaaacaacagatgctccctctggagatgaactagatccctcccaacctcgccccaaaaggaaacgctaccaccgccacacacagcgccaaatccaggaaatggaggcattcttcaaggagtgtccgcacccagatgacaagcagagaaaggagctgagccgtgacctagggttagagcctttgcaagtcaaattctggtttcaaaataagagaacccaaatgaaggctcaacacgaacggcatgagaattcgattttgaaaaacgaaaatgacaagcttcgtgctgagaacaatcgatacaaggaagccctcagcaatgccacatgccccaactgtggaggtccggctgctcttggtgagatgtcctttgatgagcaacatttgaggatcgaaaatgctcgtttacgtgaagagattgataggatatcttcaattgccgccaaatacgttggcaagcctatgtcaagctcattctctcacctttcatcttctcaagggccttcccgctcccttgatctcgcggttggcagttttggggcttcacagtctggttatgtaggagaaatgtatggatctggtgaccttctcagatcagtttcagtgcctactgatgctgacaagcccttgattgttgagcttgctgtggcagccatggaagaactcattagaatggctcaggctggagaccctttatgggttcctgctcatgacaacagctcatcaactcatcatgatattctaaatgaagacgaatacttgaggacgtttcctaggggtattggccctaaaccattgggcttaaaatctgaagcttcaagagaatcagcattggtcatcatgaatcacgttaaccttgttgagattcttatggatgtgaaccaatggtctactgtgctctgtggtattgtttcaagagctatgacccttgacatcctatcaaccggagtagctggaaactacaacggagccttgcaagtgatgtcagctgagttccaagttccctcaccgcttgttccaactcgtgagaactactttgtaaggtactgtaagcagcatactgatggaacttgggcagtggttgatgtttccttggataatttacgcccaagttcaatttcaagaagtcgtagaaggccatccggttgcttaatccaagaattgcctaatggttactccaaggttgtatgggtggaacacgtagaagtggatgatagagctgttcacaacatttacagaccactagtaaactctggtcttgcatttggagccaagcgttgggttgctacactcgatagacaatgtgaacgtcttgcaagttcattggccaacaatattccggctggagatctctgtgtcataactagtgcagaagggaggaaaagtatgttgaagctcgcgcagaggatggtgttgagcttttgcactggcgttggtgcttctacggcacacgcgtggacgacattgtcagcaacaggctctgatgatgtgagggtcatgaccaggaaaagcatggatgatcctggcaggcctcctggcattgttctaagtgctgcaacttccttctggcttccagttcctcccaagagagtctttgatttccttcgagatgagaattctcggagtgagtgggatatcctttcaaatggtggcctagtgcaagagatggcacacatagcgaacggtcgtgatcctggtaactgtgtctccttattgcgtgtaaatagtgcaaattctagtcaaagcaacatgctgatactccaggagagctgcacagattcaacagggtcgtatgtgatatatgctccagtcgatattgttgccatgaatgtcgtgttgagtgggggtgaccctgattatgttgcacttctgccatcgggttttgctatcctacctgatgggcctcctgccggaggagctggaggaattcttgatgttggttctggtggatctctactgacagtagcatttcagatcctagttgattcagttcctactgcaaaactctcgcttggatctgtggccactgttaacaatctgattaagtgcactgttgagcggattagagctgcggtcacatgtgatcagaacccatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008544 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009889 GO:0009913 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0030855 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0060429 GO:0061458 GO:0065007 GO:0080090 GO:0090351 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

738

Amino Acids

80.71

Weight (kDa)

5.82

Isoelectric Point (pI)

48.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04890 AT4G04890 AT4G21750 AT4G21750 AT4G21750 AT4G21750
fragaria_vesca	FvH4_3g02520 FvH4_3g02520 FvH4_3g02520 FvH4_3g02520
malus_domestica	MD05G1342200.v1.1 MD10G1315800.v1.1
prunus_persica	Prupe.4G024800_v2.0.a1 Prupe.4G024800_v2.0.a1 Prupe.4G024800_v2.0.a1
pyrus_communis	pycom05g31150
rosa_chinensis	RchiOBHm_Chr5g0003831
rosa_laevigata	RLG00000031179
rosa_multiflora	Rmu_sc0010187.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072160
rosa_rugosa	Rorug04G0407000 Rorug04G0407100 Rorug04G0407100 Rorug04G0407200 Rorug04G0407300 Rorug04G0407400 Rorug04G0407400 Rorug04G0407500 Rorug04G0407500
rosa_samantha	Rh5AG034500 Rh5BG032800 Rh5CG036900 Rh5DG033200
rosa_wichuraiana	Rw5G003160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1585
AccB7I	CCANNNNNTGG	2 cut(s)	223, 1398
AccBSI	CCGCTC	2 cut(s)	630, 2179
AccI	GTMKAC	2 cut(s)	53, 1010
AccII	CGCG	3 cut(s)	644, 1520, 1574
AciI	CCGC	8 cut(s)	196, 248, 561, 628, 644, 1130, 2179, 2192
AclWI	GGATC	8 cut(s)	152, 518, 703, 1634, 1805, 2077, 2089, 2143
AcoI	YGGCCR	2 cut(s)	1446, 2142
AcsI	RAATTY	5 cut(s)	314, 370, 1735, 1852, 2046
AcuI	CTGAAG	1 cut(s)	951
AfaI	GTAC	1 cut(s)	1166
AfiI	CCNNNNNNNGG	8 cut(s)	217, 223, 346, 458, 817, 1398, 2030, 2033
AflIII	ACRYGT	4 cut(s)	48, 1318, 1572, 2198
AhlI	ACTAGT	2 cut(s)	1363, 1484
AjnI	CCWGG	6 cut(s)	216, 1622, 1642, 1654, 1813, 1881
AjuI	GAANNNNNNNTTGG	2 cut(s)	1222, 1254
AleI	CACNNNNGTG	1 cut(s)	1573
Alw21I	GWGCWC	2 cut(s)	1020, 2171
Alw26I	GTCTC	3 cut(s)	101, 801, 1831
Alw44I	GTGCAC	1 cut(s)	2167
AlwI	GGATC	8 cut(s)	152, 518, 703, 1634, 1805, 2077, 2089, 2143
AlwNI	CAGNNNCTG	1 cut(s)	1601
AoxI	GGCC	8 cut(s)	620, 904, 1256, 1446, 1649, 1771, 2021, 2142
ApaLI	GTGCAC	1 cut(s)	2167
ApeKI	GCWGC	6 cut(s)	470, 770, 1174, 1673, 1890, 2189
ApoI	RAATTY	5 cut(s)	314, 370, 1735, 1852, 2046
AspA2I	CCTAGG	2 cut(s)	289, 893
AspLEI	GCGC	2 cut(s)	210, 1522
AspS9I	GGNCC	4 cut(s)	464, 620, 905, 2021
AsuC2I	CCSGG	1 cut(s)	92
AsuHPI	GGTGA	5 cut(s)	491, 593, 713, 1119, 1979
AvaII	GGWCC	1 cut(s)	464
AvrII	CCTAGG	2 cut(s)	289, 893
BaeGI	GKGCMC	1 cut(s)	2171
BalI	TGGCCA	2 cut(s)	1448, 2144
BauI	CACGAG	1 cut(s)	1143
BbsI	GAAGAC	1 cut(s)	876
Bbv12I	GWGCWC	2 cut(s)	1020, 2171
BbvCI	CCTCAGC	1 cut(s)	434
BbvI	GCAGC	6 cut(s)	457, 782, 1186, 1660, 1877, 2176
BccI	CCATC	6 cut(s)	1178, 1267, 1522, 1780, 2002, 2012
BceAI	ACGGC	3 cut(s)	267, 377, 1581
BcgI	CGANNNNNNTGC	4 cut(s)	1922, 1956, 2109, 2143
BciT130I	CCWGG	6 cut(s)	218, 1624, 1644, 1656, 1815, 1883
BclI	TGATCA	1 cut(s)	2203
BcnI	CCSGG	1 cut(s)	92
BcoDI	GTCTC	3 cut(s)	101, 801, 1831
BcuI	ACTAGT	2 cut(s)	1363, 1484
BfaI	CTAG	8 cut(s)	155, 290, 894, 1364, 1485, 1775, 1857, 2099
BfoI	RGCGCY	1 cut(s)	211
BglII	AGATCT	1 cut(s)	1468
BisI	GCNGC	7 cut(s)	471, 561, 771, 1175, 1674, 1891, 2190
BlnI	CCTAGG	2 cut(s)	289, 893
BlpI	GCTNAGC	1 cut(s)	278
BlsI	GCNGC	7 cut(s)	472, 562, 772, 1176, 1675, 1892, 2191
Bme1390I	CCNGG	7 cut(s)	92, 218, 1624, 1644, 1656, 1815, 1883
Bme18I	GGWCC	1 cut(s)	464
BmgT120I	GGNCC	4 cut(s)	464, 620, 905, 2021
BmiI	GGNNCC	4 cut(s)	89, 822, 1090, 1390
BmrFI	CCNGG	7 cut(s)	92, 218, 1624, 1644, 1656, 1815, 1883
BmsI	GCATC	2 cut(s)	124, 724
BpiI	GAAGAC	1 cut(s)	876
BpmI	CTGGAG	6 cut(s)	165, 825, 1485, 1865, 1911, 2061
Bpu10I	CCTNAGC	2 cut(s)	434, 798
Bpu1102I	GCTNAGC	1 cut(s)	278
BpuEI	CTTGAG	2 cut(s)	600, 901
BpuMI	CCSGG	1 cut(s)	92
Bsa29I	ATCGAT	1 cut(s)	418
BsaAI	YACGTR	2 cut(s)	530, 1321
BsaI	GGTCTC	1 cut(s)	801
BsaJI	CCNNGG	5 cut(s)	289, 774, 893, 1212, 1299
BsaWI	WCCGGW	2 cut(s)	1064, 1262
BsaXI	ACNNNNNCTCC	6 cut(s)	121, 151, 1489, 1519, 1811, 1841
Bsc4I	CCNNNNNNNGG	8 cut(s)	217, 223, 346, 458, 817, 1398, 2030, 2033
Bse1I	ACTGG	3 cut(s)	1552, 1694, 1928
Bse3DI	GCAATG	1 cut(s)	445
BseBI	CCWGG	6 cut(s)	218, 1624, 1644, 1656, 1815, 1883
BseCI	ATCGAT	1 cut(s)	418
BseDI	CCNNGG	5 cut(s)	289, 774, 893, 1212, 1299
BseGI	GGATG	7 cut(s)	100, 1000, 1053, 1259, 1336, 1533, 1642
BseLI	CCNNNNNNNGG	8 cut(s)	217, 223, 346, 458, 817, 1398, 2030, 2033
BseMI	GCAATG	1 cut(s)	445
BseMII	CTCAG	7 cut(s)	60, 269, 399, 448, 724, 812, 1101
BseNI	ACTGG	3 cut(s)	1552, 1694, 1928
BseRI	GAGGAG	1 cut(s)	2049
BseSI	GKGCMC	1 cut(s)	2171
BseXI	GCAGC	6 cut(s)	457, 782, 1186, 1660, 1877, 2176
BsgI	GTGCAG	2 cut(s)	1509, 1876
Bsh1236I	CGCG	3 cut(s)	644, 1520, 1574
Bsh1285I	CGRYCG	1 cut(s)	1807
BshFI	GGCC	8 cut(s)	622, 906, 1258, 1448, 1651, 1773, 2023, 2144
BshVI	ATCGAT	1 cut(s)	418
BsiEI	CGRYCG	1 cut(s)	1807
BsiHKAI	GWGCWC	2 cut(s)	1020, 2171
BsiSI	CCGG	7 cut(s)	91, 117, 467, 1065, 1263, 1460, 2031
BslI	CCNNNNNNNGG	8 cut(s)	217, 223, 346, 458, 817, 1398, 2030, 2033
BsmAI	GTCTC	3 cut(s)	101, 801, 1831
BsmI	GAATGC	1 cut(s)	230
BsnI	GGCC	8 cut(s)	622, 906, 1258, 1448, 1651, 1773, 2023, 2144
Bso31I	GGTCTC	1 cut(s)	801
Bsp1286I	GDGCHC	2 cut(s)	1020, 2171
Bsp1720I	GCTNAGC	1 cut(s)	278
Bsp19I	CCATGG	1 cut(s)	774
BspACI	CCGC	8 cut(s)	196, 248, 561, 628, 644, 1130, 2179, 2192
BspANI	GGCC	8 cut(s)	622, 906, 1258, 1448, 1651, 1773, 2023, 2144
BspCNI	CTCAG	7 cut(s)	61, 270, 400, 447, 723, 811, 1102
BspDI	ATCGAT	1 cut(s)	418
BspFNI	CGCG	3 cut(s)	644, 1520, 1574
BspHI	TCATGA	4 cut(s)	829, 853, 960, 1617
BspLI	GGNNCC	4 cut(s)	89, 822, 1090, 1390
BspPI	GGATC	8 cut(s)	152, 518, 703, 1634, 1805, 2077, 2089, 2143
BspTNI	GGTCTC	1 cut(s)	801
BsrBI	CCGCTC	2 cut(s)	630, 2179
BsrDI	GCAATG	1 cut(s)	445
BsrI	ACTGG	3 cut(s)	1552, 1694, 1928
BssECI	CCNNGG	5 cut(s)	289, 774, 893, 1212, 1299
BssSI	CACGAG	1 cut(s)	1143
BssT1I	CCWWGG	5 cut(s)	289, 774, 893, 1212, 1299
Bst2BI	CACGAG	1 cut(s)	1143
Bst2UI	CCWGG	6 cut(s)	218, 1624, 1644, 1656, 1815, 1883
Bst4CI	ACNGT	9 cut(s)	458, 669, 1015, 1169, 1805, 1823, 2083, 2149, 2173
Bst6I	CTCTTC	1 cut(s)	528
BstBAI	YACGTR	2 cut(s)	530, 1321
BstC8I	GCNNGC	4 cut(s)	578, 762, 1518, 1649
BstDEI	CTNAG	8 cut(s)	69, 278, 408, 434, 710, 798, 1110, 1667
BstDSI	CCRYGG	1 cut(s)	774
BstEII	GGTNACC	2 cut(s)	701, 1967
BstENI	CCTNNNNNAGG	1 cut(s)	2031
BstF5I	GGATG	7 cut(s)	100, 1000, 1053, 1259, 1336, 1533, 1642
BstFNI	CGCG	3 cut(s)	644, 1520, 1574
BstH2I	RGCGCY	1 cut(s)	211
BstHHI	GCGC	2 cut(s)	210, 1522
BstMAI	GTCTC	3 cut(s)	101, 801, 1831
BstMCI	CGRYCG	1 cut(s)	1807
BstMWI	GCNNNNNNNGC	6 cut(s)	195, 770, 1388, 1565, 1796, 2036
BstNI	CCWGG	6 cut(s)	218, 1624, 1644, 1656, 1815, 1883
BstNSI	RCATGY	5 cut(s)	19, 52, 450, 1873, 2202
BstPI	GGTNACC	2 cut(s)	701, 1967
BstSCI	CCNGG	7 cut(s)	90, 216, 1622, 1642, 1654, 1813, 1881
BstSLI	GKGCMC	1 cut(s)	2171
BstUI	CGCG	3 cut(s)	644, 1520, 1574
BstV1I	GCAGC	6 cut(s)	457, 782, 1186, 1660, 1877, 2176
BstV2I	GAAGAC	1 cut(s)	876
BstX2I	RGATCY	6 cut(s)	157, 695, 1468, 2069, 2094, 2135
BstYI	RGATCY	6 cut(s)	157, 695, 1468, 2069, 2094, 2135
Bsu15I	ATCGAT	1 cut(s)	418
BsuRI	GGCC	8 cut(s)	622, 906, 1258, 1448, 1651, 1773, 2023, 2144
BsuTUI	ATCGAT	1 cut(s)	418
BtgI	CCRYGG	1 cut(s)	774
BtsCI	GGATG	7 cut(s)	100, 1000, 1053, 1259, 1336, 1533, 1642
BtsI	GCAGTG	1 cut(s)	1203
BtsIMutI	CAGTG	6 cut(s)	120, 729, 1203, 1545, 2145, 2169
Cac8I	GCNNGC	4 cut(s)	578, 762, 1518, 1649
CaiI	CAGNNNCTG	1 cut(s)	1601
CciI	TCATGA	4 cut(s)	829, 853, 960, 1617
CfoI	GCGC	2 cut(s)	210, 1522
Cfr13I	GGNCC	4 cut(s)	464, 620, 905, 2021
ClaI	ATCGAT	1 cut(s)	418
Csp6I	GTAC	1 cut(s)	1165
CviQI	GTAC	1 cut(s)	1165
DdeI	CTNAG	8 cut(s)	69, 278, 408, 434, 710, 798, 1110, 1667
DrdI	GACNNNNNNGTC	1 cut(s)	1585
DseDI	GACNNNNNNGTC	1 cut(s)	1585
EaeI	YGGCCR	2 cut(s)	1446, 2142
Eam1104I	CTCTTC	1 cut(s)	528
EarI	CTCTTC	1 cut(s)	528
Eco130I	CCWWGG	5 cut(s)	289, 774, 893, 1212, 1299
Eco147I	AGGCCT	1 cut(s)	1651
Eco31I	GGTCTC	1 cut(s)	801
Eco32I	GATATC	2 cut(s)	549, 1756
Eco47I	GGWCC	1 cut(s)	464
Eco57I	CTGAAG	1 cut(s)	951
Eco91I	GGTNACC	2 cut(s)	701, 1967
EcoNI	CCTNNNNNAGG	1 cut(s)	2031
EcoO109I	RGGNCCY	1 cut(s)	620
EcoO65I	GGTNACC	2 cut(s)	701, 1967
EcoRI	GAATTC	3 cut(s)	370, 1735, 2046
EcoRII	CCWGG	6 cut(s)	216, 1622, 1642, 1654, 1813, 1881
EcoRV	GATATC	2 cut(s)	549, 1756
EcoT14I	CCWWGG	5 cut(s)	289, 774, 893, 1212, 1299
ErhI	CCWWGG	5 cut(s)	289, 774, 893, 1212, 1299
FalI	AAGNNNNNCTT	2 cut(s)	1697, 1729
FauI	CCCGC	1 cut(s)	635
FauNDI	CATATG	1 cut(s)	33
FbaI	TGATCA	1 cut(s)	2203
FblI	GTMKAC	2 cut(s)	53, 1010
Fnu4HI	GCNGC	7 cut(s)	471, 561, 771, 1175, 1674, 1891, 2190
FokI	GGATG	7 cut(s)	107, 1007, 1040, 1246, 1343, 1540, 1649
Fsp4HI	GCNGC	7 cut(s)	471, 561, 771, 1175, 1674, 1891, 2190
FspBI	CTAG	8 cut(s)	155, 290, 894, 1364, 1485, 1775, 1857, 2099
GlaI	GCGC	2 cut(s)	209, 1521
GluI	GCNGC	7 cut(s)	471, 561, 771, 1175, 1674, 1891, 2190
GsuI	CTGGAG	6 cut(s)	165, 825, 1485, 1865, 1911, 2061
HaeII	RGCGCY	1 cut(s)	211
HaeIII	GGCC	8 cut(s)	622, 906, 1258, 1448, 1651, 1773, 2023, 2144
HapII	CCGG	7 cut(s)	91, 117, 467, 1065, 1263, 1460, 2031
HhaI	GCGC	2 cut(s)	210, 1522
Hin6I	GCGC	2 cut(s)	208, 1520
HinP1I	GCGC	2 cut(s)	208, 1520
HincII	GTYRAC	3 cut(s)	54, 973, 2152
HindII	GTYRAC	3 cut(s)	54, 973, 2152
HindIII	AAGCTT	2 cut(s)	398, 933
HinfI	GANTC	6 cut(s)	944, 964, 985, 1710, 1898, 2105
HpaI	GTTAAC	2 cut(s)	973, 2152
HpaII	CCGG	7 cut(s)	91, 117, 467, 1065, 1263, 1460, 2031
HphI	GGTGA	5 cut(s)	491, 593, 713, 1119, 1979
Hpy188I	TCNGA	8 cut(s)	70, 713, 931, 1603, 1743, 2094, 2160, 2208
HpyAV	CCTTC	8 cut(s)	78, 340, 633, 716, 1248, 1487, 1693, 1733
HpyCH4III	ACNGT	9 cut(s)	458, 669, 1015, 1169, 1805, 1823, 2083, 2149, 2173
HpyCH4IV	ACGT	6 cut(s)	529, 570, 887, 969, 1320, 1429
HpyF10VI	GCNNNNNNNGC	6 cut(s)	195, 770, 1388, 1565, 1796, 2036
HpyF3I	CTNAG	8 cut(s)	69, 278, 408, 434, 710, 798, 1110, 1667
HpySE526I	ACGT	6 cut(s)	529, 570, 887, 969, 1320, 1429
HspAI	GCGC	2 cut(s)	208, 1520
Ksp22I	TGATCA	1 cut(s)	2203
KspAI	GTTAAC	2 cut(s)	973, 2152
LmnI	GCTCC	8 cut(s)	87, 142, 274, 635, 1088, 1388, 1930, 2036
Lsp1109I	GCAGC	6 cut(s)	457, 782, 1186, 1660, 1877, 2176
LweI	GCATC	2 cut(s)	124, 724
MaeI	CTAG	8 cut(s)	155, 290, 894, 1364, 1485, 1775, 1857, 2099
MaeII	ACGT	6 cut(s)	529, 570, 887, 969, 1320, 1429
MaeIII	GTNAC	6 cut(s)	284, 701, 1292, 1817, 1967, 2194
MbiI	CCGCTC	2 cut(s)	630, 2179
MboII	GAAGA	6 cut(s)	226, 543, 545, 603, 791, 881
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	6 cut(s)	157, 695, 1468, 2069, 2094, 2135
MhlI	GDGCHC	2 cut(s)	1020, 2171
MlsI	TGGCCA	2 cut(s)	1448, 2144
MluCI	AATT	9 cut(s)	314, 370, 555, 1219, 1236, 1280, 1735, 1852, 2046
MluI	ACGCGT	1 cut(s)	1572
MluNI	TGGCCA	2 cut(s)	1448, 2144
MlyI	GAGTC	1 cut(s)	1719
MmeI	TCCRAC	1 cut(s)	1163
Mox20I	TGGCCA	2 cut(s)	1448, 2144
MscI	TGGCCA	2 cut(s)	1448, 2144
MseI	TTAA	5 cut(s)	923, 972, 1271, 2151, 2163
MslI	CAYNNNNRTG	4 cut(s)	255, 791, 1182, 1573
Msp20I	TGGCCA	2 cut(s)	1448, 2144
MspA1I	CMGCKG	1 cut(s)	1109
MspI	CCGG	7 cut(s)	91, 117, 467, 1065, 1263, 1460, 2031
MspR9I	CCNGG	7 cut(s)	92, 218, 1624, 1644, 1656, 1815, 1883
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	1 cut(s)	230
MvaI	CCWGG	6 cut(s)	218, 1624, 1644, 1656, 1815, 1883
MvnI	CGCG	3 cut(s)	644, 1520, 1574
MwoI	GCNNNNNNNGC	6 cut(s)	195, 770, 1388, 1565, 1796, 2036
NciI	CCSGG	1 cut(s)	92
NcoI	CCATGG	1 cut(s)	774
NdeI	CATATG	1 cut(s)	33
NlaIV	GGNNCC	4 cut(s)	89, 822, 1090, 1390
NmuCI	GTSAC	4 cut(s)	284, 701, 1967, 2194
NspI	RCATGY	5 cut(s)	19, 52, 450, 1873, 2202
OliI	CACNNNNGTG	1 cut(s)	1573
PagI	TCATGA	4 cut(s)	829, 853, 960, 1617
PceI	AGGCCT	1 cut(s)	1651
PciI	ACATGT	2 cut(s)	48, 2198
PcsI	WCGNNNNNNNCGW	1 cut(s)	1571
PctI	GAATGC	1 cut(s)	230
PfeI	GAWTC	5 cut(s)	944, 964, 985, 1898, 2105
PflFI	GACNNNGTC	1 cut(s)	1585
PflMI	CCANNNNNTGG	2 cut(s)	223, 1398
PfoI	TCCNGGA	2 cut(s)	216, 1881
PkrI	GCNGC	7 cut(s)	472, 562, 772, 1176, 1675, 1892, 2191
PleI	GAGTC	1 cut(s)	1718
PpsI	GAGTC	1 cut(s)	1718
Ppu21I	YACGTR	2 cut(s)	530, 1321
PscI	ACATGT	2 cut(s)	48, 2198
Psp6I	CCWGG	6 cut(s)	216, 1622, 1642, 1654, 1813, 1881
PspEI	GGTNACC	2 cut(s)	701, 1967
PspGI	CCWGG	6 cut(s)	216, 1622, 1642, 1654, 1813, 1881
PspN4I	GGNNCC	4 cut(s)	89, 822, 1090, 1390
PspPI	GGNCC	4 cut(s)	464, 620, 905, 2021
PsrI	GAACNNNNNNTAC	2 cut(s)	404, 436
PstNI	CAGNNNCTG	1 cut(s)	1601
PsuI	RGATCY	6 cut(s)	157, 695, 1468, 2069, 2094, 2135
PsyI	GACNNNGTC	1 cut(s)	1585
PvuII	CAGCTG	1 cut(s)	1109
RsaI	GTAC	1 cut(s)	1166
RsaNI	GTAC	1 cut(s)	1165
RseI	CAYNNNNRTG	4 cut(s)	255, 791, 1182, 1573
SalI	GTCGAC	1 cut(s)	52
SaqAI	TTAA	5 cut(s)	923, 972, 1271, 2151, 2163
SatI	GCNGC	7 cut(s)	471, 561, 771, 1175, 1674, 1891, 2190
Sau96I	GGNCC	4 cut(s)	464, 620, 905, 2021
SchI	GAGTC	1 cut(s)	1719
ScrFI	CCNGG	7 cut(s)	92, 218, 1624, 1644, 1656, 1815, 1883
SduI	GDGCHC	2 cut(s)	1020, 2171
SfaNI	GCATC	2 cut(s)	124, 724
SinI	GGWCC	1 cut(s)	464
SmiMI	CAYNNNNRTG	4 cut(s)	255, 791, 1182, 1573
SmlI	CTYRAG	2 cut(s)	615, 880
SmoI	CTYRAG	2 cut(s)	615, 880
SpeI	ACTAGT	2 cut(s)	1363, 1484
Sse9I	AATT	9 cut(s)	314, 370, 555, 1219, 1236, 1280, 1735, 1852, 2046
SseBI	AGGCCT	1 cut(s)	1651
SsiI	CCGC	8 cut(s)	196, 248, 561, 628, 644, 1130, 2179, 2192
SspI	AATATT	1 cut(s)	1456
SspMI	CTAG	8 cut(s)	155, 290, 894, 1364, 1485, 1775, 1857, 2099
StuI	AGGCCT	1 cut(s)	1651
StyD4I	CCNGG	7 cut(s)	90, 216, 1622, 1642, 1654, 1813, 1881
StyI	CCWWGG	5 cut(s)	289, 774, 893, 1212, 1299
TaaI	ACNGT	9 cut(s)	458, 669, 1015, 1169, 1805, 1823, 2083, 2149, 2173
TaiI	ACGT	6 cut(s)	532, 573, 890, 972, 1323, 1432
TaqI	TCGA	8 cut(s)	21, 53, 374, 418, 513, 1413, 1726, 1932
TasI	AATT	9 cut(s)	314, 370, 555, 1219, 1236, 1280, 1735, 1852, 2046
TauI	GCSGC	1 cut(s)	563
TfiI	GAWTC	5 cut(s)	944, 964, 985, 1898, 2105
Tru1I	TTAA	5 cut(s)	923, 972, 1271, 2151, 2163
Tru9I	TTAA	5 cut(s)	923, 972, 1271, 2151, 2163
TscAI	CASTG	6 cut(s)	127, 729, 1203, 1552, 2152, 2176
TseFI	GTSAC	4 cut(s)	284, 701, 1967, 2194
TseI	GCWGC	6 cut(s)	470, 770, 1174, 1673, 1890, 2189
Tsp45I	GTSAC	4 cut(s)	284, 701, 1967, 2194
TspDTI	ATGAA	7 cut(s)	165, 359, 597, 882, 977, 1431, 1961
TspGWI	ACGGA	1 cut(s)	1101
TspRI	CASTG	6 cut(s)	127, 729, 1203, 1552, 2152, 2176
Tth111I	GACNNNGTC	1 cut(s)	1585
Van91I	CCANNNNNTGG	2 cut(s)	223, 1398
VneI	GTGCAC	1 cut(s)	2167
VpaK11BI	GGWCC	1 cut(s)	464
XagI	CCTNNNNNAGG	1 cut(s)	2031
XapI	RAATTY	5 cut(s)	314, 370, 1735, 1852, 2046
XceI	RCATGY	5 cut(s)	19, 52, 450, 1873, 2202
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1630
XmaJI	CCTAGG	2 cut(s)	289, 893
XmiI	GTMKAC	2 cut(s)	53, 1010
XspI	CTAG	8 cut(s)	155, 290, 894, 1364, 1485, 1775, 1857, 2099

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.