Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003728

Physical Location & Seq

Genomic Coordinates Reverse (-)

57057089 .. 57060710

Gene Structure 3622 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0407100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGCTCGCCTTCACCCACTTCCATCTAGTCCCCGGTTTTTTTCCTCCGGTCCTCCACGTCACCAATTCGGCCGCCGGGATGAGGCGGGGACGTGTTCTTGAGCCGGCGAGGCTTAGGGTGGTGGGAGAAAGCAGAAGCAGGGTTTCTGTTGTTCTAGGGTTTTGGGAGGGGAGGAAAGAAGGGGGTTGTGGGTTTGTGAGGCGGTGTAGGGATTCTGATTTGGAAGGGGATTTTGCCCTGGAAGCTGAGATTTTGGAGTTCATGAAGGGCTCGGACAAGCCTCGGGCTTTTCCGAGCAAGAGGGACTTGGTGGAGGCTGGGAGGTTGGATTTGGTCGACGCCATTGTGAGGGAAGGTGGTTGGCTTTCGCTGGGTTGGGATTTGGGGGATGAAGAAACAGCTCAAGATAGTGGCTTTAGGAATTGGGATGAAGGATACGAGAGCAGTGATTCCGATATGGTTTCTGATTCTTCTTCTTCTTCTGTAGTAGCGTCGTCGTCTGGTACATCACTAGAAGCTGCAACAACTGAGGTTGATACTGGAATCGAGGGTATATTGAACCGATTAGAGAAACAGAGAAATTTGACCCTTGGGTTTGTTTTGAGAGATAAAGAAGACAGTACTGGCCTCGCAAATAATGATAACAAACATGATCGGTGCCCTGAAACCTCAACTGATGCGACAGTTGGCGCAACAAGCAGAAGTATCAGACCTGCTTCATCAAACCCCACTAAAGCCATTCTTAGTGATTTGGGAGGCCCACTTAATCATAGCAGATCTCTTTTAGATGCTGATGTTCAGAGAAACTATCCAAAGCCTGAAATGTGGAGAACTTGGAGCAGCCAAAGGGCTGGATCTTCAGATCTGGAATTTGAAGCTGGTGAAGTTTCTTATGATGAAATGGGAGGATCAAAGGGAGTTTTGCAAAATGAAATACTTCAAACGAAAGAGGGTGCTAATGAACCGAATGGAAGGAATGATCTAGATTCTGAGGATGAAGTGATCAATTACAAACAAGTACGAATTCGCATGCAGCACCTTGAATCCGAGCTATCCTCTGTACTTCACTCATTGAGGTCTAAAACTAGTAATGTTGCACCAAAGGAGATGGGGGATCATGAAAGCTCCTCTGATGATTTGTGGAAAGTGTCTGATGCTTGGGAGTTTCAAGAAAATGAAATTATGCATGCCCAGAACAAATTACGTTCAACACGTGCAAAGCTTGCTGTTTTAGAAGGAAAGATGGCGATGGCAATAATTGCTGTGCAAAAGAAAGTGGAGGAGAAACAGAAGAGGGTTAATGATGCTCGTAGAGCCTTACGGCTTCTCCGAACTGCTTTAATAGTTTGGACCAATCCAGCCTCAGAAGTGCTTTTAGCAGGATCATATGATGGTTGGGCTACCCAGAGAAAGATGGAGAGGTCGAGTACAGGAATCTTCTCTGTTAGCCTTAAGTTGTATCCGGGTAGATATGAGATCAAATTCATTGTTGATGGGGAATGGCGAATTGATCCCCTACGCCCTATTGTTCGCAACGACGGATTTGAAAATAATATACTGATTATAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008544 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009889 GO:0009913 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0030855 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0060429 GO:0061458 GO:0065007 GO:0080090 GO:0090351 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

523

Amino Acids

58.21

Weight (kDa)

5.35

Isoelectric Point (pI)

48.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMPK1_CBM	PF16561	447 - 521	2.2e-17	Glycogen recognition site of AMP-activated protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0003728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04890 AT4G04890 AT4G21750 AT4G21750 AT4G21750 AT4G21750
fragaria_vesca	FvH4_3g02520 FvH4_3g02520 FvH4_3g02520 FvH4_3g02520
malus_domestica	MD05G1342200.v1.1 MD10G1315800.v1.1
prunus_persica	Prupe.4G024800_v2.0.a1 Prupe.4G024800_v2.0.a1 Prupe.4G024800_v2.0.a1
pyrus_communis	pycom05g31150
rosa_chinensis	RchiOBHm_Chr5g0003831
rosa_laevigata	RLG00000031179
rosa_multiflora	Rmu_sc0010187.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072160
rosa_rugosa	Rorug04G0407000 Rorug04G0407100 Rorug04G0407100 Rorug04G0407200 Rorug04G0407300 Rorug04G0407400 Rorug04G0407400 Rorug04G0407500 Rorug04G0407500
rosa_samantha	Rh5AG034500 Rh5BG032800 Rh5CG036900 Rh5DG033200
rosa_wichuraiana	Rw5G003160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1565
Acc36I	ACCTGC	1 cut(s)	721
AccB1I	GGYRCC	1 cut(s)	657
AccI	GTMKAC	1 cut(s)	336
AciI	CCGC	3 cut(s)	72, 85, 202
AclWI	GGATC	5 cut(s)	862, 916, 1122, 1390, 1505
AcoI	YGGCCR	1 cut(s)	69
AcsI	RAATTY	4 cut(s)	580, 869, 1023, 1481
AcuI	CTGAAG	1 cut(s)	843
AcvI	CACGTG	1 cut(s)	1214
AcyI	GRCGYC	1 cut(s)	339
AfaI	GTAC	5 cut(s)	505, 622, 1020, 1062, 1429
AfiI	CCNNNNNNNGG	2 cut(s)	81, 348
AflII	CTTAAG	1 cut(s)	1451
AflIII	ACRYGT	2 cut(s)	91, 1211
AgsI	TTSAA	7 cut(s)	559, 875, 941, 1043, 1169, 1209, 1547
AhlI	ACTAGT	1 cut(s)	1085
AjiI	CACGTC	2 cut(s)	58, 92
AjnI	CCWGG	1 cut(s)	237
AluBI	AGCT	7 cut(s)	245, 401, 518, 878, 1051, 1125, 1222
AluI	AGCT	7 cut(s)	245, 401, 518, 878, 1051, 1125, 1222
AlwI	GGATC	5 cut(s)	862, 916, 1122, 1390, 1505
Ama87I	CYCGRG	1 cut(s)	282
AoxI	GGCC	3 cut(s)	69, 625, 757
ApeKI	GCWGC	3 cut(s)	518, 840, 1033
ApoI	RAATTY	4 cut(s)	580, 869, 1023, 1481
Asp700I	GAANNNNTTC	1 cut(s)	936
AspLEI	GCGC	1 cut(s)	692
AspS9I	GGNCC	3 cut(s)	49, 758, 1350
AsuC2I	CCSGG	3 cut(s)	33, 76, 1464
AsuHPI	GGTGA	3 cut(s)	4, 52, 893
AvaI	CYCGRG	1 cut(s)	282
AvaII	GGWCC	2 cut(s)	49, 1350
BaeGI	GKGCMC	1 cut(s)	662
BanI	GGYRCC	1 cut(s)	657
BanII	GRGCYC	1 cut(s)	272
BbrPI	CACGTG	1 cut(s)	1214
BbsI	GAAGAC	1 cut(s)	621
BbvI	GCAGC	3 cut(s)	505, 852, 1045
BccI	CCATC	7 cut(s)	30, 1102, 1237, 1243, 1385, 1408, 1487
BceAI	ACGGC	1 cut(s)	1337
BciT130I	CCWGG	1 cut(s)	239
BciVI	GTATCC	2 cut(s)	428, 1470
BclI	TGATCA	1 cut(s)	1002
BcnI	CCSGG	3 cut(s)	33, 76, 1464
BcuI	ACTAGT	1 cut(s)	1085
BfaI	CTAG	5 cut(s)	26, 155, 512, 983, 1086
BfmI	CTRYAG	1 cut(s)	483
BfrI	CTTAAG	1 cut(s)	1451
BfuAI	ACCTGC	1 cut(s)	721
BfuI	GTATCC	2 cut(s)	428, 1470
BglI	GCCNNNNNGGC	1 cut(s)	109
BglII	AGATCT	2 cut(s)	776, 862
BisI	GCNGC	4 cut(s)	72, 519, 841, 1034
BlsI	GCNGC	4 cut(s)	73, 520, 842, 1035
BmcAI	AGTACT	1 cut(s)	622
Bme1390I	CCNGG	4 cut(s)	33, 76, 239, 1464
Bme18I	GGWCC	2 cut(s)	49, 1350
BmeT110I	CYCGRG	1 cut(s)	282
BmgBI	CACGTC	2 cut(s)	58, 92
BmgT120I	GGNCC	3 cut(s)	49, 758, 1350
BmiI	GGNNCC	1 cut(s)	659
BmrFI	CCNGG	4 cut(s)	33, 76, 239, 1464
BmsI	GCATC	4 cut(s)	667, 778, 1144, 1294
BpiI	GAAGAC	1 cut(s)	621
BplI	GAGNNNNNCTC	2 cut(s)	1040, 1072
Bpu10I	CCTNAGC	1 cut(s)	113
BpuEI	CTTGAG	2 cut(s)	119, 387
BpuMI	CCSGG	3 cut(s)	33, 76, 1464
BsaAI	YACGTR	1 cut(s)	1214
BsaHI	GRCGYC	1 cut(s)	339
BsaJI	CCNNGG	4 cut(s)	31, 237, 281, 589
BsaWI	WCCGGW	1 cut(s)	46
BsaXI	ACNNNNNCTCC	2 cut(s)	1311, 1341
Bsc4I	CCNNNNNNNGG	2 cut(s)	81, 348
Bse118I	RCCGGY	1 cut(s)	103
Bse1I	ACTGG	2 cut(s)	544, 628
BseBI	CCWGG	1 cut(s)	239
BseDI	CCNNGG	4 cut(s)	31, 237, 281, 589
BseGI	GGATG	4 cut(s)	84, 394, 433, 1000
BseLI	CCNNNNNNNGG	2 cut(s)	81, 348
BseMII	CTCAG	4 cut(s)	237, 519, 981, 1377
BseNI	ACTGG	2 cut(s)	544, 628
BseRI	GAGGAG	2 cut(s)	1117, 1295
BseSI	GKGCMC	1 cut(s)	662
BseX3I	CGGCCG	1 cut(s)	69
BseXI	GCAGC	3 cut(s)	505, 852, 1045
BseYI	CCCAGC	2 cut(s)	317, 370
Bsh1285I	CGRYCG	1 cut(s)	72
BshFI	GGCC	3 cut(s)	71, 627, 759
BshNI	GGYRCC	1 cut(s)	657
BsiEI	CGRYCG	1 cut(s)	72
BsiHKCI	CYCGRG	1 cut(s)	282
BsiSI	CCGG	5 cut(s)	33, 47, 75, 104, 1463
BslFI	GGGAC	3 cut(s)	14, 102, 317
BslI	CCNNNNNNNGG	2 cut(s)	81, 348
BsmFI	GGGAC	3 cut(s)	14, 102, 317
BsnI	GGCC	3 cut(s)	71, 627, 759
BsoBI	CYCGRG	1 cut(s)	282
Bsp1286I	GDGCHC	2 cut(s)	272, 662
BspACI	CCGC	3 cut(s)	72, 85, 202
BspANI	GGCC	3 cut(s)	71, 627, 759
BspCNI	CTCAG	4 cut(s)	238, 520, 982, 1376
BspHI	TCATGA	2 cut(s)	261, 1117
BspLI	GGNNCC	1 cut(s)	659
BspMI	ACCTGC	1 cut(s)	721
BspPI	GGATC	5 cut(s)	862, 916, 1122, 1390, 1505
BspT107I	GGYRCC	1 cut(s)	657
BspTI	CTTAAG	1 cut(s)	1451
BsrFI	RCCGGY	1 cut(s)	103
BsrI	ACTGG	2 cut(s)	544, 628
BssAI	RCCGGY	1 cut(s)	103
BssECI	CCNNGG	4 cut(s)	31, 237, 281, 589
BssNI	GRCGYC	1 cut(s)	339
BssT1I	CCWWGG	1 cut(s)	589
Bst2UI	CCWGG	1 cut(s)	239
Bst4CI	ACNGT	2 cut(s)	620, 685
Bst6I	CTCTTC	1 cut(s)	1286
BstACI	GRCGYC	1 cut(s)	339
BstAFI	CTTAAG	1 cut(s)	1451
BstAPI	GCANNNNNTGC	2 cut(s)	1223, 1259
BstBAI	YACGTR	1 cut(s)	1214
BstC8I	GCNNGC	5 cut(s)	6, 105, 1031, 1188, 1224
BstDEI	CTNAG	6 cut(s)	113, 246, 528, 743, 990, 1363
BstF5I	GGATG	4 cut(s)	84, 394, 433, 1000
BstHHI	GCGC	1 cut(s)	692
BstMCI	CGRYCG	1 cut(s)	72
BstMWI	GCNNNNNNNGC	6 cut(s)	109, 242, 696, 1223, 1259, 1313
BstNI	CCWGG	1 cut(s)	239
BstNSI	RCATGY	2 cut(s)	1033, 1190
BstSCI	CCNGG	4 cut(s)	31, 74, 237, 1462
BstSFI	CTRYAG	1 cut(s)	483
BstSLI	GKGCMC	1 cut(s)	662
BstV1I	GCAGC	3 cut(s)	505, 852, 1045
BstV2I	GAAGAC	1 cut(s)	621
BstX2I	RGATCY	3 cut(s)	776, 854, 862
BstXI	CCANNNNNNTGG	1 cut(s)	851
BstYI	RGATCY	3 cut(s)	776, 854, 862
BstZI	CGGCCG	1 cut(s)	69
BsuI	GTATCC	2 cut(s)	428, 1470
BsuRI	GGCC	3 cut(s)	71, 627, 759
BtgZI	GCGATG	1 cut(s)	1262
BtrI	CACGTC	2 cut(s)	58, 92
BtsCI	GGATG	4 cut(s)	84, 394, 433, 1000
BtsI	GCAGTG	1 cut(s)	451
BtsIMutI	CAGTG	1 cut(s)	451
BveI	ACCTGC	1 cut(s)	721
Cac8I	GCNNGC	5 cut(s)	6, 105, 1031, 1188, 1224
CciI	TCATGA	2 cut(s)	261, 1117
CfoI	GCGC	1 cut(s)	692
Cfr10I	RCCGGY	1 cut(s)	103
Cfr13I	GGNCC	3 cut(s)	49, 758, 1350
CseI	GACGC	2 cut(s)	347, 480
Csp6I	GTAC	5 cut(s)	504, 621, 1019, 1061, 1428
CviAII	CATG	5 cut(s)	262, 650, 1030, 1118, 1187
CviQI	GTAC	5 cut(s)	504, 621, 1019, 1061, 1428
DdeI	CTNAG	6 cut(s)	113, 246, 528, 743, 990, 1363
EaeI	YGGCCR	1 cut(s)	69
EagI	CGGCCG	1 cut(s)	69
Eam1104I	CTCTTC	1 cut(s)	1286
EarI	CTCTTC	1 cut(s)	1286
EclXI	CGGCCG	1 cut(s)	69
Eco130I	CCWWGG	1 cut(s)	589
Eco24I	GRGCYC	1 cut(s)	272
Eco47I	GGWCC	2 cut(s)	49, 1350
Eco52I	CGGCCG	1 cut(s)	69
Eco57I	CTGAAG	1 cut(s)	843
Eco72I	CACGTG	1 cut(s)	1214
Eco88I	CYCGRG	1 cut(s)	282
EcoRI	GAATTC	1 cut(s)	1023
EcoRII	CCWGG	1 cut(s)	237
EcoT14I	CCWWGG	1 cut(s)	589
EcoT22I	ATGCAT	1 cut(s)	1188
EcoT38I	GRGCYC	1 cut(s)	272
ErhI	CCWWGG	1 cut(s)	589
FaeI	CATG	5 cut(s)	265, 653, 1033, 1121, 1190
FalI	AAGNNNNNCTT	4 cut(s)	290, 322, 726, 758
FaqI	GGGAC	3 cut(s)	14, 102, 317
FatI	CATG	5 cut(s)	261, 649, 1029, 1117, 1186
FauI	CCCGC	1 cut(s)	78
FauNDI	CATATG	1 cut(s)	1387
FbaI	TGATCA	1 cut(s)	1002
FblI	GTMKAC	1 cut(s)	336
Fnu4HI	GCNGC	4 cut(s)	72, 519, 841, 1034
FokI	GGATG	4 cut(s)	91, 401, 440, 1007
FriOI	GRGCYC	1 cut(s)	272
Fsp4HI	GCNGC	4 cut(s)	72, 519, 841, 1034
FspBI	CTAG	5 cut(s)	26, 155, 512, 983, 1086
GlaI	GCGC	1 cut(s)	691
GluI	GCNGC	4 cut(s)	72, 519, 841, 1034
GsaI	CCCAGC	2 cut(s)	321, 374
HaeIII	GGCC	3 cut(s)	71, 627, 759
HapII	CCGG	5 cut(s)	33, 47, 75, 104, 1463
HgaI	GACGC	2 cut(s)	347, 480
HhaI	GCGC	1 cut(s)	692
Hin1I	GRCGYC	1 cut(s)	339
Hin1II	CATG	5 cut(s)	265, 653, 1033, 1121, 1190
Hin6I	GCGC	1 cut(s)	690
HinP1I	GCGC	1 cut(s)	690
HincII	GTYRAC	1 cut(s)	337
HindII	GTYRAC	1 cut(s)	337
HindIII	AAGCTT	1 cut(s)	1220
HinfI	GANTC	7 cut(s)	212, 449, 467, 543, 986, 1043, 1434
HpaII	CCGG	5 cut(s)	33, 47, 75, 104, 1463
HphI	GGTGA	3 cut(s)	4, 52, 893
Hpy166II	GTNNAC	1 cut(s)	337
Hpy188III	TCNNGA	7 cut(s)	98, 262, 404, 866, 983, 1118, 1169
Hpy8I	GTNNAC	1 cut(s)	337
Hpy99I	CGWCG	4 cut(s)	341, 496, 499, 1541
HpyAV	CCTTC	8 cut(s)	19, 173, 218, 259, 347, 425, 966, 1229
HpyCH4III	ACNGT	2 cut(s)	620, 685
HpyCH4IV	ACGT	4 cut(s)	57, 91, 1204, 1213
HpyCH4V	TGCA	7 cut(s)	521, 925, 1033, 1097, 1186, 1217, 1267
HpyF10VI	GCNNNNNNNGC	6 cut(s)	109, 242, 696, 1223, 1259, 1313
HpyF3I	CTNAG	6 cut(s)	113, 246, 528, 743, 990, 1363
HpySE526I	ACGT	4 cut(s)	57, 91, 1204, 1213
Hsp92I	GRCGYC	1 cut(s)	339
Hsp92II	CATG	5 cut(s)	265, 653, 1033, 1121, 1190
HspAI	GCGC	1 cut(s)	690
KroI	GCCGGC	1 cut(s)	103
KroNI	GCCGGC	1 cut(s)	105
Ksp22I	TGATCA	1 cut(s)	1002
LmnI	GCTCC	2 cut(s)	837, 1130
Lsp1109I	GCAGC	3 cut(s)	505, 852, 1045
LweI	GCATC	4 cut(s)	667, 778, 1144, 1294
MaeI	CTAG	5 cut(s)	26, 155, 512, 983, 1086
MaeII	ACGT	4 cut(s)	57, 91, 1204, 1213
MaeIII	GTNAC	1 cut(s)	58
MboII	GAAGA	9 cut(s)	404, 462, 465, 468, 471, 626, 849, 1303, 1429
MflI	RGATCY	3 cut(s)	776, 854, 862
MhlI	GDGCHC	2 cut(s)	272, 662
MmeI	TCCRAC	1 cut(s)	306
Mph1103I	ATGCAT	1 cut(s)	1188
MroNI	GCCGGC	1 cut(s)	103
MroXI	GAANNNNTTC	1 cut(s)	936
MseI	TTAA	4 cut(s)	765, 1299, 1340, 1452
MspCI	CTTAAG	1 cut(s)	1451
MspI	CCGG	5 cut(s)	33, 47, 75, 104, 1463
MspR9I	CCNGG	4 cut(s)	33, 76, 239, 1464
MvaI	CCWGG	1 cut(s)	239
MwoI	GCNNNNNNNGC	6 cut(s)	109, 242, 696, 1223, 1259, 1313
NaeI	GCCGGC	1 cut(s)	105
NciI	CCSGG	3 cut(s)	33, 76, 1464
NdeI	CATATG	1 cut(s)	1387
NgoMIV	GCCGGC	1 cut(s)	103
NlaIII	CATG	5 cut(s)	265, 653, 1033, 1121, 1190
NlaIV	GGNNCC	1 cut(s)	659
NmuCI	GTSAC	1 cut(s)	58
NsiI	ATGCAT	1 cut(s)	1188
NspI	RCATGY	2 cut(s)	1033, 1190
PaeI	GCATGC	2 cut(s)	1033, 1190
PagI	TCATGA	2 cut(s)	261, 1117
PcsI	WCGNNNNNNNCGW	2 cut(s)	1210, 1327
PdiI	GCCGGC	1 cut(s)	105
PdmI	GAANNNNTTC	1 cut(s)	936
PfeI	GAWTC	7 cut(s)	212, 449, 467, 543, 986, 1043, 1434
PkrI	GCNGC	4 cut(s)	73, 520, 842, 1035
PmaCI	CACGTG	1 cut(s)	1214
PmlI	CACGTG	1 cut(s)	1214
Ppu21I	YACGTR	1 cut(s)	1214
PsiI	TTATAA	1 cut(s)	1565
Psp6I	CCWGG	1 cut(s)	237
PspCI	CACGTG	1 cut(s)	1214
PspFI	CCCAGC	2 cut(s)	317, 370
PspGI	CCWGG	1 cut(s)	237
PspN4I	GGNNCC	1 cut(s)	659
PspPI	GGNCC	3 cut(s)	49, 758, 1350
PsuI	RGATCY	3 cut(s)	776, 854, 862
RsaI	GTAC	5 cut(s)	505, 622, 1020, 1062, 1429
RsaNI	GTAC	5 cut(s)	504, 621, 1019, 1061, 1428
SalI	GTCGAC	1 cut(s)	335
SaqAI	TTAA	4 cut(s)	765, 1299, 1340, 1452
SatI	GCNGC	4 cut(s)	72, 519, 841, 1034
Sau96I	GGNCC	3 cut(s)	49, 758, 1350
ScaI	AGTACT	1 cut(s)	622
ScrFI	CCNGG	4 cut(s)	33, 76, 239, 1464
SduI	GDGCHC	2 cut(s)	272, 662
SfaNI	GCATC	4 cut(s)	667, 778, 1144, 1294
SfcI	CTRYAG	1 cut(s)	483
SinI	GGWCC	2 cut(s)	49, 1350
SmlI	CTYRAG	3 cut(s)	98, 402, 1451
SmoI	CTYRAG	3 cut(s)	98, 402, 1451
SpeI	ACTAGT	1 cut(s)	1085
SphI	GCATGC	2 cut(s)	1033, 1190
SsiI	CCGC	3 cut(s)	72, 85, 202
SspMI	CTAG	5 cut(s)	26, 155, 512, 983, 1086
StyD4I	CCNGG	4 cut(s)	31, 74, 237, 1462
StyI	CCWWGG	1 cut(s)	589
TaaI	ACNGT	2 cut(s)	620, 685
TaiI	ACGT	4 cut(s)	60, 94, 1207, 1216
TaqI	TCGA	3 cut(s)	336, 546, 1424
TatI	WGTACW	3 cut(s)	620, 1060, 1427
TauI	GCSGC	1 cut(s)	74
TfiI	GAWTC	7 cut(s)	212, 449, 467, 543, 986, 1043, 1434
Tru1I	TTAA	4 cut(s)	765, 1299, 1340, 1452
Tru9I	TTAA	4 cut(s)	765, 1299, 1340, 1452
TscAI	CASTG	1 cut(s)	451
TseFI	GTSAC	1 cut(s)	58
TseI	GCWGC	3 cut(s)	518, 840, 1033
Tsp45I	GTSAC	1 cut(s)	58
TspGWI	ACGGA	1 cut(s)	1554
TspRI	CASTG	1 cut(s)	451
Vha464I	CTTAAG	1 cut(s)	1451
VpaK11BI	GGWCC	2 cut(s)	49, 1350
XapI	RAATTY	4 cut(s)	580, 869, 1023, 1481
XbaI	TCTAGA	1 cut(s)	982
XceI	RCATGY	2 cut(s)	1033, 1190
XmiI	GTMKAC	1 cut(s)	336
XmnI	GAANNNNTTC	1 cut(s)	936
XspI	CTAG	5 cut(s)	26, 155, 512, 983, 1086
ZrmI	AGTACT	1 cut(s)	622
Zsp2I	ATGCAT	1 cut(s)	1188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.