Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0003728

Physical Location & Seq

Genomic Coordinates Reverse (-)

2290276 .. 2295868

Gene Structure 5593 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG032800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGTCCTTTGATGAGCAACATTTGAGGATCGAAAATGCTCGTTTACGTGAAGAGATTGATCGGATATCTTCAATTGCCGCCAAATACGTTGGCAAGCCTATGTCAAGCTCATTCTCTCACCTTTCATCTTCTCAAGGGCCTTCCCGCTCCCTTGATCTCGCGGTTGGCAGTTTTGGGGCTTCACAGTCTGTTTATGTAGGAGAAATGTATGGATCTGGTGACCTTTTCAGATCAGTTTCAGTGCCTACTGATGCTGACAAGCCCTTGATTGTTGAGCTTGCCGTGGCAGCCATGGAAGAACTCATTAGAATGGCTCAGGCTGGAGACCCTTTATGGGTTCCTGCTCATGACAACAGCTCATCAACTCATCATGATATTCTAAATGAAGACGAATACTTGAGGACGTTTCCTCGGGGTATTGGCCCTAAACCATTGGGCTTAAAATCTGAAGCTTCAAGAGAATCAGCATTGGTCATCATGAATCACGTTAACCTTGTTGAGATTCTTATGGATGTGAACCAATGGTCTACTGTGTTCTGTGGTATTGTTTCAAGAGCAATGACCCTTGACATCCTATCAACCGGAGTAGCTGGAAACTACAACGGAGCCTTGCAAGTGATGTCAGCTGAGTTCCAAGTTCCTTCACCGCTTGTTCCAACTCGTGAGAACTACTTTGTAAGGTACTGTAAGCAGCATACTGATGGAACTTGGGCAGTGGTTGATGTTTCCTTGGATAATTTACGCCCAAGTTCAATTTCAAGAAGTCGTAGAAGGCCATCCGGTTGCTTAATCCAAGAATTGCCTAATGGTTACTCCAAGGTTGTATGGGTGGAACACGTAGAAGTGGATGATAGAGCTGTTCACAACATTTACAGACCACTAGTAAACTCTGGTCTTGCATTTGGAGCCAAGCGTTGGGTTGCTACACTTGATAGACAATGTGAGCGTCTTGCAAGTTCATTGGCCAACAATATTCCGGCTGGAGATCTCTGTGTCATAACTAGTGCAGAAGGGAGGAAAAGTATGTTGAAGCTCGCGCAGAGGATGGTGTTGAGCTTTTGCACTGGCGTTGGTGCTTCTACGGCACATGCGTGGACGACATTGTCAGCAACAGGCTCTGATGATGTGAGGGTCATGACCAGGAAAAGCATGGATGATCCTGGCAGGCCTCCTGGCATTGTTCTAAGTGCTGCAACTTCCTTCTGGCTTCCAGTTCCTCCCAAGAGAGTCTTTGATTTCCTTCGAGATGAGAATTCTCGGAGTGAGTGGGATATCCTTTCAAATGGTGGCCTAGTGCAAGAGATGGCACACATAGCTAACGGTCGTGATCCTGGTAACTGTGTCTCCTTATTGCGTGTAAATAGTGCAAATTCTAGTCAAAGCAACATGCTGATACTCCAGGAGAGCTGCACAGATTCAACAGGATCGTATGTGATATATGCTCCAGTCGATATTGTGGCCATGAATGTCGTGTTGAGTGGGGGTGACCCTGATTATGTTGCACTTCTGCCATCGGGTTTTGCTATCCTACCTGATGGGCCTCCTGCTGGAGGAGCCGGAGGAATTCTTGATGTTGGTTCTGGTGGATCTCTACTGACAGTAGCATTTCAGATCCTAGTTGATTCAGTTCCTACTGCAAAACTCTCGCTTGGATCTGTGGCCACTGTTAACAATCTGATTAAGTGCACTGTTGAGCGGATTAGAGCTGCGGTCACATGTGATCAGAACCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008544 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009889 GO:0009913 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0030855 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0060429 GO:0061458 GO:0065007 GO:0080090 GO:0090351 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

577

Amino Acids

62.09

Weight (kDa)

5.54

Isoelectric Point (pI)

46.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	93 - 316	3.8e-53	START domain
PDF2_C	PF25797	335 - 573	2.3e-102	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04890 AT4G04890 AT4G21750 AT4G21750 AT4G21750 AT4G21750
fragaria_vesca	FvH4_3g02520 FvH4_3g02520 FvH4_3g02520 FvH4_3g02520
malus_domestica	MD05G1342200.v1.1 MD10G1315800.v1.1
prunus_persica	Prupe.4G024800_v2.0.a1 Prupe.4G024800_v2.0.a1 Prupe.4G024800_v2.0.a1
pyrus_communis	pycom05g31150
rosa_chinensis	RchiOBHm_Chr5g0003831
rosa_laevigata	RLG00000031179
rosa_multiflora	Rmu_sc0010187.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072160
rosa_rugosa	Rorug04G0407000 Rorug04G0407100 Rorug04G0407100 Rorug04G0407200 Rorug04G0407300 Rorug04G0407400 Rorug04G0407400 Rorug04G0407500 Rorug04G0407500
rosa_samantha	Rh5AG034500 Rh5BG032800 Rh5CG036900 Rh5DG033200
rosa_wichuraiana	Rw5G003160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1102
AccB7I	CCANNNNNTGG	1 cut(s)	915
AccBSI	CCGCTC	2 cut(s)	147, 1696
AccI	GTMKAC	1 cut(s)	527
AccII	CGCG	2 cut(s)	161, 1037
AciI	CCGC	6 cut(s)	78, 145, 161, 647, 1696, 1709
AclWI	GGATC	8 cut(s)	35, 220, 1151, 1322, 1432, 1594, 1606, 1660
AcoI	YGGCCR	3 cut(s)	963, 1458, 1659
AcsI	RAATTY	3 cut(s)	1252, 1369, 1563
AcuI	CTGAAG	1 cut(s)	468
AfaI	GTAC	1 cut(s)	683
AfiI	CCNNNNNNNGG	4 cut(s)	334, 915, 1547, 1550
AflIII	ACRYGT	2 cut(s)	835, 1715
AgsI	TTSAA	8 cut(s)	72, 456, 552, 753, 759, 1030, 1281, 1419
AhlI	ACTAGT	2 cut(s)	880, 1001
AjnI	CCWGG	5 cut(s)	1139, 1159, 1171, 1330, 1398
AjuI	GAANNNNNNNTTGG	2 cut(s)	739, 771
AleI	CACNNNNGTG	1 cut(s)	1090
Alw21I	GWGCWC	1 cut(s)	1688
Alw26I	GTCTC	2 cut(s)	318, 1348
Alw44I	GTGCAC	1 cut(s)	1684
AlwI	GGATC	8 cut(s)	35, 220, 1151, 1322, 1432, 1594, 1606, 1660
AlwNI	CAGNNNCTG	1 cut(s)	1118
Ama87I	CYCGRG	1 cut(s)	411
AoxI	GGCC	9 cut(s)	137, 421, 773, 963, 1166, 1288, 1458, 1538, 1659
ApaLI	GTGCAC	1 cut(s)	1684
ApeKI	GCWGC	5 cut(s)	287, 691, 1190, 1407, 1706
ApoI	RAATTY	3 cut(s)	1252, 1369, 1563
AspLEI	GCGC	1 cut(s)	1039
AspS9I	GGNCC	3 cut(s)	137, 422, 1538
AsuHPI	GGTGA	4 cut(s)	110, 230, 636, 1496
AvaI	CYCGRG	1 cut(s)	411
BaeGI	GKGCMC	1 cut(s)	1688
BalI	TGGCCA	3 cut(s)	965, 1460, 1661
BauI	CACGAG	1 cut(s)	660
BbsI	GAAGAC	1 cut(s)	393
Bbv12I	GWGCWC	1 cut(s)	1688
BbvI	GCAGC	5 cut(s)	299, 703, 1177, 1394, 1693
BccI	CCATC	6 cut(s)	695, 784, 1039, 1297, 1519, 1529
BceAI	ACGGC	2 cut(s)	266, 1098
BcgI	CGANNNNNNTGC	2 cut(s)	1626, 1660
BciT130I	CCWGG	5 cut(s)	1141, 1161, 1173, 1332, 1400
BclI	TGATCA	1 cut(s)	1720
BcoDI	GTCTC	2 cut(s)	318, 1348
BcuI	ACTAGT	2 cut(s)	880, 1001
BfaI	CTAG	5 cut(s)	881, 1002, 1292, 1374, 1616
BglII	AGATCT	1 cut(s)	985
BisI	GCNGC	6 cut(s)	78, 288, 692, 1191, 1408, 1707
BlsI	GCNGC	6 cut(s)	79, 289, 693, 1192, 1409, 1708
Bme1390I	CCNGG	5 cut(s)	1141, 1161, 1173, 1332, 1400
BmeT110I	CYCGRG	1 cut(s)	411
BmgT120I	GGNCC	3 cut(s)	137, 422, 1538
BmiI	GGNNCC	4 cut(s)	339, 607, 907, 1555
BmrFI	CCNGG	5 cut(s)	1141, 1161, 1173, 1332, 1400
BmsI	GCATC	1 cut(s)	241
BpiI	GAAGAC	1 cut(s)	393
BpmI	CTGGAG	5 cut(s)	342, 1002, 1382, 1428, 1569
Bpu10I	CCTNAGC	1 cut(s)	315
BpuEI	CTTGAG	2 cut(s)	117, 418
BsaAI	YACGTR	2 cut(s)	47, 838
BsaI	GGTCTC	1 cut(s)	318
BsaJI	CCNNGG	5 cut(s)	282, 291, 410, 729, 816
BsaWI	WCCGGW	2 cut(s)	581, 779
BsaXI	ACNNNNNCTCC	4 cut(s)	1006, 1036, 1328, 1358
Bsc4I	CCNNNNNNNGG	4 cut(s)	334, 915, 1547, 1550
Bse1I	ACTGG	3 cut(s)	1069, 1211, 1445
Bse3DI	GCAATG	1 cut(s)	564
BseBI	CCWGG	5 cut(s)	1141, 1161, 1173, 1332, 1400
BseDI	CCNNGG	5 cut(s)	282, 291, 410, 729, 816
BseGI	GGATG	6 cut(s)	517, 570, 776, 853, 1050, 1159
BseLI	CCNNNNNNNGG	4 cut(s)	334, 915, 1547, 1550
BseMI	GCAATG	1 cut(s)	564
BseMII	CTCAG	2 cut(s)	329, 618
BseNI	ACTGG	3 cut(s)	1069, 1211, 1445
BseRI	GAGGAG	1 cut(s)	1566
BseSI	GKGCMC	1 cut(s)	1688
BseXI	GCAGC	5 cut(s)	299, 703, 1177, 1394, 1693
BsgI	GTGCAG	2 cut(s)	1026, 1393
Bsh1236I	CGCG	2 cut(s)	161, 1037
Bsh1285I	CGRYCG	1 cut(s)	1324
BshFI	GGCC	9 cut(s)	139, 423, 775, 965, 1168, 1290, 1460, 1540, 1661
BsiEI	CGRYCG	1 cut(s)	1324
BsiHKAI	GWGCWC	1 cut(s)	1688
BsiHKCI	CYCGRG	1 cut(s)	411
BsiSI	CCGG	4 cut(s)	582, 780, 977, 1557
BslI	CCNNNNNNNGG	4 cut(s)	334, 915, 1547, 1550
BsmAI	GTCTC	2 cut(s)	318, 1348
BsnI	GGCC	9 cut(s)	139, 423, 775, 965, 1168, 1290, 1460, 1540, 1661
Bso31I	GGTCTC	1 cut(s)	318
BsoBI	CYCGRG	1 cut(s)	411
Bsp1286I	GDGCHC	1 cut(s)	1688
Bsp19I	CCATGG	1 cut(s)	291
BspACI	CCGC	6 cut(s)	78, 145, 161, 647, 1696, 1709
BspANI	GGCC	9 cut(s)	139, 423, 775, 965, 1168, 1290, 1460, 1540, 1661
BspCNI	CTCAG	2 cut(s)	328, 619
BspFNI	CGCG	2 cut(s)	161, 1037
BspHI	TCATGA	4 cut(s)	346, 370, 477, 1134
BspLI	GGNNCC	4 cut(s)	339, 607, 907, 1555
BspPI	GGATC	8 cut(s)	35, 220, 1151, 1322, 1432, 1594, 1606, 1660
BspTNI	GGTCTC	1 cut(s)	318
BsrBI	CCGCTC	2 cut(s)	147, 1696
BsrDI	GCAATG	1 cut(s)	564
BsrI	ACTGG	3 cut(s)	1069, 1211, 1445
BssECI	CCNNGG	5 cut(s)	282, 291, 410, 729, 816
BssSI	CACGAG	1 cut(s)	660
BssT1I	CCWWGG	3 cut(s)	291, 729, 816
Bst2BI	CACGAG	1 cut(s)	660
Bst2UI	CCWGG	5 cut(s)	1141, 1161, 1173, 1332, 1400
Bst4CI	ACNGT	8 cut(s)	186, 532, 686, 1322, 1340, 1600, 1666, 1690
Bst6I	CTCTTC	1 cut(s)	45
BstBAI	YACGTR	2 cut(s)	47, 838
BstC8I	GCNNGC	4 cut(s)	95, 279, 1035, 1166
BstDEI	CTNAG	3 cut(s)	315, 627, 1184
BstDSI	CCRYGG	2 cut(s)	282, 291
BstEII	GGTNACC	2 cut(s)	218, 1484
BstENI	CCTNNNNNAGG	1 cut(s)	1548
BstF5I	GGATG	6 cut(s)	517, 570, 776, 853, 1050, 1159
BstFNI	CGCG	2 cut(s)	161, 1037
BstHHI	GCGC	1 cut(s)	1039
BstMAI	GTCTC	2 cut(s)	318, 1348
BstMCI	CGRYCG	1 cut(s)	1324
BstMWI	GCNNNNNNNGC	5 cut(s)	287, 905, 1082, 1313, 1553
BstNI	CCWGG	5 cut(s)	1141, 1161, 1173, 1332, 1400
BstNSI	RCATGY	3 cut(s)	1091, 1390, 1719
BstPI	GGTNACC	2 cut(s)	218, 1484
BstSCI	CCNGG	5 cut(s)	1139, 1159, 1171, 1330, 1398
BstSLI	GKGCMC	1 cut(s)	1688
BstUI	CGCG	2 cut(s)	161, 1037
BstV1I	GCAGC	5 cut(s)	299, 703, 1177, 1394, 1693
BstV2I	GAAGAC	1 cut(s)	393
BstX2I	RGATCY	5 cut(s)	212, 985, 1586, 1611, 1652
BstYI	RGATCY	5 cut(s)	212, 985, 1586, 1611, 1652
BsuRI	GGCC	9 cut(s)	139, 423, 775, 965, 1168, 1290, 1460, 1540, 1661
BtgI	CCRYGG	2 cut(s)	282, 291
BtsCI	GGATG	6 cut(s)	517, 570, 776, 853, 1050, 1159
BtsI	GCAGTG	1 cut(s)	720
BtsIMutI	CAGTG	5 cut(s)	246, 720, 1062, 1662, 1686
Cac8I	GCNNGC	4 cut(s)	95, 279, 1035, 1166
CaiI	CAGNNNCTG	1 cut(s)	1118
CciI	TCATGA	4 cut(s)	346, 370, 477, 1134
CfoI	GCGC	1 cut(s)	1039
Cfr13I	GGNCC	3 cut(s)	137, 422, 1538
CseI	GACGC	1 cut(s)	935
Csp6I	GTAC	1 cut(s)	682
CviQI	GTAC	1 cut(s)	682
DdeI	CTNAG	3 cut(s)	315, 627, 1184
DrdI	GACNNNNNNGTC	1 cut(s)	1102
DseDI	GACNNNNNNGTC	1 cut(s)	1102
EaeI	YGGCCR	3 cut(s)	963, 1458, 1659
Eam1104I	CTCTTC	1 cut(s)	45
EarI	CTCTTC	1 cut(s)	45
Eco130I	CCWWGG	3 cut(s)	291, 729, 816
Eco147I	AGGCCT	1 cut(s)	1168
Eco31I	GGTCTC	1 cut(s)	318
Eco32I	GATATC	2 cut(s)	66, 1273
Eco57I	CTGAAG	1 cut(s)	468
Eco88I	CYCGRG	1 cut(s)	411
Eco91I	GGTNACC	2 cut(s)	218, 1484
EcoNI	CCTNNNNNAGG	1 cut(s)	1548
EcoO109I	RGGNCCY	1 cut(s)	137
EcoO65I	GGTNACC	2 cut(s)	218, 1484
EcoRI	GAATTC	2 cut(s)	1252, 1563
EcoRII	CCWGG	5 cut(s)	1139, 1159, 1171, 1330, 1398
EcoRV	GATATC	2 cut(s)	66, 1273
EcoT14I	CCWWGG	3 cut(s)	291, 729, 816
ErhI	CCWWGG	3 cut(s)	291, 729, 816
FalI	AAGNNNNNCTT	2 cut(s)	1214, 1246
FauI	CCCGC	1 cut(s)	152
FbaI	TGATCA	1 cut(s)	1720
FblI	GTMKAC	1 cut(s)	527
Fnu4HI	GCNGC	6 cut(s)	78, 288, 692, 1191, 1408, 1707
FokI	GGATG	6 cut(s)	524, 557, 763, 860, 1057, 1166
Fsp4HI	GCNGC	6 cut(s)	78, 288, 692, 1191, 1408, 1707
FspBI	CTAG	5 cut(s)	881, 1002, 1292, 1374, 1616
GlaI	GCGC	1 cut(s)	1038
GluI	GCNGC	6 cut(s)	78, 288, 692, 1191, 1408, 1707
GsuI	CTGGAG	5 cut(s)	342, 1002, 1382, 1428, 1569
HaeIII	GGCC	9 cut(s)	139, 423, 775, 965, 1168, 1290, 1460, 1540, 1661
HapII	CCGG	4 cut(s)	582, 780, 977, 1557
HgaI	GACGC	1 cut(s)	935
HhaI	GCGC	1 cut(s)	1039
Hin6I	GCGC	1 cut(s)	1037
HinP1I	GCGC	1 cut(s)	1037
HincII	GTYRAC	2 cut(s)	490, 1669
HindII	GTYRAC	2 cut(s)	490, 1669
HindIII	AAGCTT	1 cut(s)	450
HinfI	GANTC	6 cut(s)	461, 481, 502, 1227, 1415, 1622
HpaI	GTTAAC	2 cut(s)	490, 1669
HpaII	CCGG	4 cut(s)	582, 780, 977, 1557
HphI	GGTGA	4 cut(s)	110, 230, 636, 1496
Hpy166II	GTNNAC	9 cut(s)	44, 490, 517, 528, 862, 886, 1095, 1669, 1686
Hpy188I	TCNGA	8 cut(s)	63, 230, 448, 1120, 1260, 1611, 1677, 1725
Hpy8I	GTNNAC	9 cut(s)	44, 490, 517, 528, 862, 886, 1095, 1669, 1686
HpyAV	CCTTC	6 cut(s)	150, 651, 765, 1004, 1210, 1250
HpyCH4III	ACNGT	8 cut(s)	186, 532, 686, 1322, 1340, 1600, 1666, 1690
HpyCH4IV	ACGT	5 cut(s)	46, 87, 404, 486, 837
HpyF10VI	GCNNNNNNNGC	5 cut(s)	287, 905, 1082, 1313, 1553
HpyF3I	CTNAG	3 cut(s)	315, 627, 1184
HpySE526I	ACGT	5 cut(s)	46, 87, 404, 486, 837
HspAI	GCGC	1 cut(s)	1037
Ksp22I	TGATCA	1 cut(s)	1720
KspAI	GTTAAC	2 cut(s)	490, 1669
LmnI	GCTCC	5 cut(s)	152, 605, 905, 1447, 1553
Lsp1109I	GCAGC	5 cut(s)	299, 703, 1177, 1394, 1693
LweI	GCATC	1 cut(s)	241
MaeI	CTAG	5 cut(s)	881, 1002, 1292, 1374, 1616
MaeII	ACGT	5 cut(s)	46, 87, 404, 486, 837
MaeIII	GTNAC	5 cut(s)	218, 809, 1334, 1484, 1711
MbiI	CCGCTC	2 cut(s)	147, 1696
MboII	GAAGA	5 cut(s)	60, 62, 120, 308, 398
MfeI	CAATTG	1 cut(s)	72
MflI	RGATCY	5 cut(s)	212, 985, 1586, 1611, 1652
MhlI	GDGCHC	1 cut(s)	1688
MlsI	TGGCCA	3 cut(s)	965, 1460, 1661
MluCI	AATT	7 cut(s)	72, 736, 753, 797, 1252, 1369, 1563
MluNI	TGGCCA	3 cut(s)	965, 1460, 1661
MlyI	GAGTC	1 cut(s)	1236
MmeI	TCCRAC	1 cut(s)	680
Mox20I	TGGCCA	3 cut(s)	965, 1460, 1661
MscI	TGGCCA	3 cut(s)	965, 1460, 1661
MseI	TTAA	5 cut(s)	440, 489, 788, 1668, 1680
MslI	CAYNNNNRTG	3 cut(s)	308, 699, 1090
Msp20I	TGGCCA	3 cut(s)	965, 1460, 1661
MspA1I	CMGCKG	1 cut(s)	626
MspI	CCGG	4 cut(s)	582, 780, 977, 1557
MspR9I	CCNGG	5 cut(s)	1141, 1161, 1173, 1332, 1400
MunI	CAATTG	1 cut(s)	72
MvaI	CCWGG	5 cut(s)	1141, 1161, 1173, 1332, 1400
MvnI	CGCG	2 cut(s)	161, 1037
MwoI	GCNNNNNNNGC	5 cut(s)	287, 905, 1082, 1313, 1553
NcoI	CCATGG	1 cut(s)	291
NlaIV	GGNNCC	4 cut(s)	339, 607, 907, 1555
NmuCI	GTSAC	3 cut(s)	218, 1484, 1711
NspI	RCATGY	3 cut(s)	1091, 1390, 1719
OliI	CACNNNNGTG	1 cut(s)	1090
PagI	TCATGA	4 cut(s)	346, 370, 477, 1134
PceI	AGGCCT	1 cut(s)	1168
PciI	ACATGT	1 cut(s)	1715
PcsI	WCGNNNNNNNCGW	1 cut(s)	1088
PfeI	GAWTC	5 cut(s)	461, 481, 502, 1415, 1622
PflFI	GACNNNGTC	1 cut(s)	1102
PflMI	CCANNNNNTGG	1 cut(s)	915
PfoI	TCCNGGA	1 cut(s)	1398
PkrI	GCNGC	6 cut(s)	79, 289, 693, 1192, 1409, 1708
PleI	GAGTC	1 cut(s)	1235
PpsI	GAGTC	1 cut(s)	1235
Ppu21I	YACGTR	2 cut(s)	47, 838
PscI	ACATGT	1 cut(s)	1715
Psp6I	CCWGG	5 cut(s)	1139, 1159, 1171, 1330, 1398
PspEI	GGTNACC	2 cut(s)	218, 1484
PspGI	CCWGG	5 cut(s)	1139, 1159, 1171, 1330, 1398
PspN4I	GGNNCC	4 cut(s)	339, 607, 907, 1555
PspPI	GGNCC	3 cut(s)	137, 422, 1538
PstNI	CAGNNNCTG	1 cut(s)	1118
PsuI	RGATCY	5 cut(s)	212, 985, 1586, 1611, 1652
PsyI	GACNNNGTC	1 cut(s)	1102
PvuII	CAGCTG	1 cut(s)	626
RsaI	GTAC	1 cut(s)	683
RsaNI	GTAC	1 cut(s)	682
RseI	CAYNNNNRTG	3 cut(s)	308, 699, 1090
SaqAI	TTAA	5 cut(s)	440, 489, 788, 1668, 1680
SatI	GCNGC	6 cut(s)	78, 288, 692, 1191, 1408, 1707
Sau96I	GGNCC	3 cut(s)	137, 422, 1538
SchI	GAGTC	1 cut(s)	1236
ScrFI	CCNGG	5 cut(s)	1141, 1161, 1173, 1332, 1400
SduI	GDGCHC	1 cut(s)	1688
SfaNI	GCATC	1 cut(s)	241
SmiMI	CAYNNNNRTG	3 cut(s)	308, 699, 1090
SmlI	CTYRAG	2 cut(s)	132, 397
SmoI	CTYRAG	2 cut(s)	132, 397
SpeI	ACTAGT	2 cut(s)	880, 1001
Sse9I	AATT	7 cut(s)	72, 736, 753, 797, 1252, 1369, 1563
SseBI	AGGCCT	1 cut(s)	1168
SsiI	CCGC	6 cut(s)	78, 145, 161, 647, 1696, 1709
SspI	AATATT	1 cut(s)	973
SspMI	CTAG	5 cut(s)	881, 1002, 1292, 1374, 1616
StuI	AGGCCT	1 cut(s)	1168
StyD4I	CCNGG	5 cut(s)	1139, 1159, 1171, 1330, 1398
StyI	CCWWGG	3 cut(s)	291, 729, 816
TaaI	ACNGT	8 cut(s)	186, 532, 686, 1322, 1340, 1600, 1666, 1690
TaiI	ACGT	5 cut(s)	49, 90, 407, 489, 840
TaqI	TCGA	3 cut(s)	30, 1243, 1449
TasI	AATT	7 cut(s)	72, 736, 753, 797, 1252, 1369, 1563
TauI	GCSGC	1 cut(s)	80
TfiI	GAWTC	5 cut(s)	461, 481, 502, 1415, 1622
Tru1I	TTAA	5 cut(s)	440, 489, 788, 1668, 1680
Tru9I	TTAA	5 cut(s)	440, 489, 788, 1668, 1680
TscAI	CASTG	5 cut(s)	246, 720, 1069, 1669, 1693
TseFI	GTSAC	3 cut(s)	218, 1484, 1711
TseI	GCWGC	5 cut(s)	287, 691, 1190, 1407, 1706
Tsp45I	GTSAC	3 cut(s)	218, 1484, 1711
TspDTI	ATGAA	5 cut(s)	114, 399, 494, 948, 1478
TspGWI	ACGGA	1 cut(s)	618
TspRI	CASTG	5 cut(s)	246, 720, 1069, 1669, 1693
Tth111I	GACNNNGTC	1 cut(s)	1102
Van91I	CCANNNNNTGG	1 cut(s)	915
VneI	GTGCAC	1 cut(s)	1684
XagI	CCTNNNNNAGG	1 cut(s)	1548
XapI	RAATTY	3 cut(s)	1252, 1369, 1563
XceI	RCATGY	3 cut(s)	1091, 1390, 1719
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1147
XmiI	GTMKAC	1 cut(s)	527
XspI	CTAG	5 cut(s)	881, 1002, 1292, 1374, 1616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.