Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003728

Physical Location & Seq

Genomic Coordinates Forward (+)

57062868 .. 57065736

Gene Structure 2869 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0407300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGTGTGGGAGAGAATAAGAAGCCCTAATTTCTTCTCCTCCTTCTGCTGCTGCTTCAGATCAAAACCCAGAGCTCATTCTAGTCCTTCTTCTTCAGAGGCATTACTGCTGTTACAAAAGGAGGTAGACGATGTGGTGGTTACAAGGCCCGGATGGAAGGCCATGCCTTACATTTTGGGGAACGAAGCGATCGAGAAGATGGCGACTTTTGGGCTCACAACAAACTTGATGGTGTATCTGGTGAGGGAGTATCACATGGATCAGGTTTTTGCTGCAAACCTTCTCGCTCTCTGGACCTGTGCTTACTGTTTGTTCACCGTTCTCGGTGCTTCTCTTGCTGATACATACCTTGGCAAATTCCGAACGATTCTTTTCGCTTCCTTTGCAAGTCTTCTGGGCATGGTGACAATAACTCTGACAGCCTTTGTGCCACTACTGCGACCTCCACCTTGCGATCTTGCTCAGCATTGCATCTCCAACACAAAAACCCAATTGTGGATTTTGATTATGGGTCTAAGCTGGTTAGGCATAGGCAGTGCTGGGATTAGGCCATGCAGCCTTCCCTTTGGAATTGATCAATTTGATTCTTCAACTGTGGAAGGAAGACTAGCGATCCATAGCTTCTTAAATTGGTACTACACCTCAGCTACATTGGTTGTGTTAATCAATCTAGTCTTCGTGGTCTACATTCAAGACTCTGTGAGTTGGGCTCTGGGATTTGGCATACCCACCCTGCTCATGATGTTATGTGCAATTCCTTTATTTTTGGTTGGATCGAACATCTACGTGCGTGTGAAGCCAGAAGGAAGCATATTCTTAAGCTTTGCACAAGTTCTTGTTGCGGCATACAAGAAGCGCCATCTTAAGCTTCTCAATGATGAAAGGGTACAGGGAGTTCTCTTCGATGCTTCATTGGATGGGAATGCAGTAGTGTCAAAGCTTCCTCTATCCACTCAATCTAGCTTCTTGAAGAAAGCGGCCCTAGTGGTGGATAATGAACTTAAAGAAGATGGATTTTCTGCAAATGTGTGGAGGCTGTGCACCATGCAACAAGTTGAAGATGTAATATGTGTGTTAAAAACTCTCCCAATATGGGCTTCTGGAGGCATCTTCTTGATCCCTTTTGTAGAGGAAGGAACATTTATGGTATCACAAGCCCTAAAAATGGACCGTCACATCGGAACCAAATTCCAAATGCCTGCAGGTTCAATCAAAATAATATCATTGAGCATAGTAATTATATGGCTCCCGTTGTACGACTTTGTTATACAACCAGCCCTGAAAAAGATCACCAAGTATGAAGATGGGATTCCAACTTTAAAAAGAATAGGAATGGGGTACGTTTTCTCAATTCTATGTATGTTGGTGGCTGGATTGGTTGAGCAACAGAGAAGAGCTTTGGCTACATTACATGGTGAATCACTAAATGGGGTTGCACCCATGTCGGTTTTCTGGCTGTTTCCACAGCTTATGCTACTGGGGCTTAGTGAGGTGTGTGGGGCTCTTGGACACATTGAATTTTATAACAGAGAGTTTCCTGAGAAGATGAAGAGTATTGGGAACTCTTTGATCTATCTCTGCATGGCGGGTGCGACTTATTTGAGTAGTTTGGTGGTGACCTTTGTGCATAGTGTTACTGGAAAGCATGGCCAATCCAACTGGTTGGATAATGATATCAATGCCGGCAGATTGGACTTCTTTTACTTCTTGATAGCTGGGTTAGGGGTGCTAAATTTTGTTTACTTTGTGTTTTGTGCTCGTGGATATACTTACAAGGCTAGTGTAAAGGCAGTAGAGATCGTCCCTGATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0008544 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009889 GO:0009913 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0030855 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0060429 GO:0061458 GO:0065007 GO:0080090 GO:0090351 GO:0090627 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

604

Amino Acids

67.1

Weight (kDa)

8.39

Isoelectric Point (pI)

36.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTR2	PF00854	120 - 555	4.9e-67	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04890 AT4G04890 AT4G21750 AT4G21750 AT4G21750 AT4G21750
fragaria_vesca	FvH4_3g02520 FvH4_3g02520 FvH4_3g02520 FvH4_3g02520
malus_domestica	MD05G1342200.v1.1 MD10G1315800.v1.1
prunus_persica	Prupe.4G024800_v2.0.a1 Prupe.4G024800_v2.0.a1 Prupe.4G024800_v2.0.a1
pyrus_communis	pycom05g31150
rosa_chinensis	RchiOBHm_Chr5g0003831
rosa_laevigata	RLG00000031179
rosa_multiflora	Rmu_sc0010187.1_g000002
rosa_roxburghii	Rroxscaffold_1G00072160
rosa_rugosa	Rorug04G0407000 Rorug04G0407100 Rorug04G0407100 Rorug04G0407200 Rorug04G0407300 Rorug04G0407400 Rorug04G0407400 Rorug04G0407500 Rorug04G0407500
rosa_samantha	Rh5AG034500 Rh5BG032800 Rh5CG036900 Rh5DG033200
rosa_wichuraiana	Rw5G003160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1524
Acc36I	ACCTGC	1 cut(s)	1193
AccI	GTMKAC	2 cut(s)	126, 684
AciI	CCGC	3 cut(s)	842, 977, 1586
AclWI	GGATC	4 cut(s)	267, 607, 781, 1111
AcoI	YGGCCR	1 cut(s)	1648
AcsI	RAATTY	4 cut(s)	356, 1187, 1517, 1732
AcuI	CTGAAG	2 cut(s)	40, 78
AfaI	GTAC	4 cut(s)	635, 888, 1256, 1340
AfiI	CCNNNNNNNGG	4 cut(s)	495, 988, 1093, 1165
AflII	CTTAAG	2 cut(s)	817, 863
AgsI	TTSAA	6 cut(s)	591, 692, 970, 1058, 1209, 1517
AjuI	GAANNNNNNNTTGG	2 cut(s)	1081, 1113
Alw21I	GWGCWC	3 cut(s)	76, 1043, 1759
Alw44I	GTGCAC	1 cut(s)	1039
AlwI	GGATC	4 cut(s)	267, 607, 781, 1111
AoxI	GGCC	5 cut(s)	146, 159, 548, 978, 1648
ApaLI	GTGCAC	1 cut(s)	1039
ApeKI	GCWGC	4 cut(s)	48, 51, 272, 555
ApoI	RAATTY	4 cut(s)	356, 1187, 1517, 1732
AspLEI	GCGC	1 cut(s)	858
AspS9I	GGNCC	4 cut(s)	147, 294, 979, 1168
AsuC2I	CCSGG	1 cut(s)	150
AsuHPI	GGTGA	6 cut(s)	253, 307, 415, 1282, 1427, 1627
AvaII	GGWCC	2 cut(s)	294, 1168
BaeGI	GKGCMC	1 cut(s)	1043
BalI	TGGCCA	1 cut(s)	1650
BanII	GRGCYC	4 cut(s)	76, 216, 712, 1504
BauI	CACGAG	1 cut(s)	1758
BbsI	GAAGAC	3 cut(s)	383, 610, 667
Bbv12I	GWGCWC	3 cut(s)	76, 1043, 1759
BbvCI	CCTCAGC	1 cut(s)	643
BbvI	GCAGC	4 cut(s)	35, 38, 259, 567
BccI	CCATC	7 cut(s)	147, 193, 223, 867, 911, 1004, 1298
BcgI	CGANNNNNNTGC	2 cut(s)	1425, 1459
BclI	TGATCA	1 cut(s)	574
BcnI	CCSGG	1 cut(s)	150
BfaI	CTAG	6 cut(s)	81, 608, 671, 960, 983, 1779
BfmI	CTRYAG	1 cut(s)	1200
BfoI	RGCGCY	1 cut(s)	859
BfrI	CTTAAG	2 cut(s)	817, 863
BfuAI	ACCTGC	1 cut(s)	1193
BisI	GCNGC	6 cut(s)	49, 52, 273, 556, 843, 978
BlpI	GCTNAGC	1 cut(s)	462
BlsI	GCNGC	6 cut(s)	50, 53, 274, 557, 844, 979
Bme1390I	CCNGG	1 cut(s)	150
Bme18I	GGWCC	2 cut(s)	294, 1168
BmgT120I	GGNCC	4 cut(s)	147, 294, 979, 1168
BmiI	GGNNCC	2 cut(s)	1183, 1247
BmrFI	CCNGG	1 cut(s)	150
BmrI	ACTGGG	1 cut(s)	1487
BmsI	GCATC	3 cut(s)	480, 895, 1116
BmuI	ACTGGG	1 cut(s)	1487
BpiI	GAAGAC	3 cut(s)	383, 610, 667
BplI	GAGNNNNNCTC	2 cut(s)	694, 726
BpmI	CTGGAG	1 cut(s)	1122
Bpu10I	CCTNAGC	1 cut(s)	643
Bpu1102I	GCTNAGC	1 cut(s)	462
BpuMI	CCSGG	1 cut(s)	150
BsaAI	YACGTR	1 cut(s)	787
BsaJI	CCNNGG	1 cut(s)	349
Bsc4I	CCNNNNNNNGG	4 cut(s)	495, 988, 1093, 1165
Bse118I	RCCGGY	1 cut(s)	1682
Bse1I	ACTGG	3 cut(s)	1482, 1642, 1664
Bse3DI	GCAATG	1 cut(s)	466
BseDI	CCNNGG	1 cut(s)	349
BseGI	GGATG	2 cut(s)	158, 922
BseLI	CCNNNNNNNGG	4 cut(s)	495, 988, 1093, 1165
BseMI	GCAATG	1 cut(s)	466
BseMII	CTCAG	3 cut(s)	476, 657, 1530
BseNI	ACTGG	3 cut(s)	1482, 1642, 1664
BseRI	GAGGAG	1 cut(s)	28
BseSI	GKGCMC	1 cut(s)	1043
BseXI	GCAGC	4 cut(s)	35, 38, 259, 567
BseYI	CCCAGC	2 cut(s)	539, 1715
Bsh1285I	CGRYCG	1 cut(s)	192
BshFI	GGCC	5 cut(s)	148, 161, 550, 980, 1650
BsiEI	CGRYCG	1 cut(s)	192
BsiHKAI	GWGCWC	3 cut(s)	76, 1043, 1759
BsiSI	CCGG	2 cut(s)	150, 1683
BslFI	GGGAC	1 cut(s)	1787
BslI	CCNNNNNNNGG	4 cut(s)	495, 988, 1093, 1165
BsmFI	GGGAC	1 cut(s)	1787
BsmI	GAATGC	1 cut(s)	928
BsnI	GGCC	5 cut(s)	148, 161, 550, 980, 1650
Bsp1286I	GDGCHC	6 cut(s)	76, 216, 712, 1043, 1504, 1759
Bsp1720I	GCTNAGC	1 cut(s)	462
BspACI	CCGC	3 cut(s)	842, 977, 1586
BspANI	GGCC	5 cut(s)	148, 161, 550, 980, 1650
BspCNI	CTCAG	3 cut(s)	475, 656, 1531
BspHI	TCATGA	1 cut(s)	738
BspLI	GGNNCC	2 cut(s)	1183, 1247
BspMAI	CTGCAG	1 cut(s)	1204
BspMI	ACCTGC	1 cut(s)	1193
BspPI	GGATC	4 cut(s)	267, 607, 781, 1111
BspQI	GCTCTTC	1 cut(s)	1387
BspTI	CTTAAG	2 cut(s)	817, 863
BsrDI	GCAATG	1 cut(s)	466
BsrFI	RCCGGY	1 cut(s)	1682
BsrI	ACTGG	3 cut(s)	1482, 1642, 1664
BssAI	RCCGGY	1 cut(s)	1682
BssECI	CCNNGG	1 cut(s)	349
BssSI	CACGAG	1 cut(s)	1758
BssT1I	CCWWGG	1 cut(s)	349
Bst2BI	CACGAG	1 cut(s)	1758
Bst4CI	ACNGT	4 cut(s)	308, 319, 595, 1172
Bst6I	CTCTTC	3 cut(s)	905, 1387, 1544
BstAFI	CTTAAG	2 cut(s)	817, 863
BstBAI	YACGTR	1 cut(s)	787
BstC8I	GCNNGC	2 cut(s)	1200, 1684
BstDEI	CTNAG	5 cut(s)	462, 515, 643, 1484, 1539
BstEII	GGTNACC	1 cut(s)	1615
BstF5I	GGATG	2 cut(s)	158, 922
BstH2I	RGCGCY	1 cut(s)	859
BstHHI	GCGC	1 cut(s)	858
BstMCI	CGRYCG	1 cut(s)	192
BstMWI	GCNNNNNNNGC	6 cut(s)	335, 383, 436, 525, 796, 1480
BstPI	GGTNACC	1 cut(s)	1615
BstSCI	CCNGG	1 cut(s)	148
BstSFI	CTRYAG	1 cut(s)	1200
BstSLI	GKGCMC	1 cut(s)	1043
BstV1I	GCAGC	4 cut(s)	35, 38, 259, 567
BstV2I	GAAGAC	3 cut(s)	383, 610, 667
BstXI	CCANNNNNNTGG	1 cut(s)	1663
BsuRI	GGCC	5 cut(s)	148, 161, 550, 980, 1650
BtsCI	GGATG	2 cut(s)	158, 922
BtsI	GCAGTG	1 cut(s)	541
BtsIMutI	CAGTG	1 cut(s)	541
BveI	ACCTGC	1 cut(s)	1193
Cac8I	GCNNGC	2 cut(s)	1200, 1684
CciI	TCATGA	1 cut(s)	738
CfoI	GCGC	1 cut(s)	858
Cfr10I	RCCGGY	1 cut(s)	1682
Cfr13I	GGNCC	4 cut(s)	147, 294, 979, 1168
Csp6I	GTAC	4 cut(s)	634, 887, 1255, 1339
CviQI	GTAC	4 cut(s)	634, 887, 1255, 1339
DdeI	CTNAG	5 cut(s)	462, 515, 643, 1484, 1539
DraI	TTTAAA	1 cut(s)	1320
EaeI	YGGCCR	1 cut(s)	1648
Eam1104I	CTCTTC	3 cut(s)	905, 1387, 1544
EarI	CTCTTC	3 cut(s)	905, 1387, 1544
Ecl136II	GAGCTC	1 cut(s)	74
Eco130I	CCWWGG	1 cut(s)	349
Eco24I	GRGCYC	4 cut(s)	76, 216, 712, 1504
Eco32I	GATATC	1 cut(s)	1675
Eco47I	GGWCC	2 cut(s)	294, 1168
Eco53kI	GAGCTC	1 cut(s)	74
Eco57I	CTGAAG	2 cut(s)	40, 78
Eco91I	GGTNACC	1 cut(s)	1615
EcoICRI	GAGCTC	1 cut(s)	74
EcoO65I	GGTNACC	1 cut(s)	1615
EcoRV	GATATC	1 cut(s)	1675
EcoT14I	CCWWGG	1 cut(s)	349
EcoT38I	GRGCYC	4 cut(s)	76, 216, 712, 1504
ErhI	CCWWGG	1 cut(s)	349
FaqI	GGGAC	1 cut(s)	1787
FauI	CCCGC	1 cut(s)	1579
FbaI	TGATCA	1 cut(s)	574
FblI	GTMKAC	2 cut(s)	126, 684
Fnu4HI	GCNGC	6 cut(s)	49, 52, 273, 556, 843, 978
FokI	GGATG	2 cut(s)	165, 929
FriOI	GRGCYC	4 cut(s)	76, 216, 712, 1504
Fsp4HI	GCNGC	6 cut(s)	49, 52, 273, 556, 843, 978
FspBI	CTAG	6 cut(s)	81, 608, 671, 960, 983, 1779
GlaI	GCGC	1 cut(s)	857
GluI	GCNGC	6 cut(s)	49, 52, 273, 556, 843, 978
GsaI	CCCAGC	2 cut(s)	543, 1719
GsuI	CTGGAG	1 cut(s)	1122
HaeII	RGCGCY	1 cut(s)	859
HaeIII	GGCC	5 cut(s)	148, 161, 550, 980, 1650
HapII	CCGG	2 cut(s)	150, 1683
HhaI	GCGC	1 cut(s)	858
Hin6I	GCGC	1 cut(s)	856
HinP1I	GCGC	1 cut(s)	856
HindIII	AAGCTT	3 cut(s)	820, 866, 938
HinfI	GANTC	5 cut(s)	367, 584, 695, 1309, 1418
HpaII	CCGG	2 cut(s)	150, 1683
HphI	GGTGA	6 cut(s)	253, 307, 415, 1282, 1427, 1627
Hpy166II	GTNNAC	5 cut(s)	127, 315, 685, 1041, 1741
Hpy188I	TCNGA	5 cut(s)	59, 97, 362, 417, 1181
Hpy188III	TCNNGA	9 cut(s)	193, 292, 692, 739, 967, 1101, 1114, 1538, 1708
Hpy8I	GTNNAC	5 cut(s)	127, 315, 685, 1041, 1741
HpyAV	CCTTC	8 cut(s)	52, 96, 151, 290, 569, 593, 797, 1127
HpyCH4III	ACNGT	4 cut(s)	308, 319, 595, 1172
HpyCH4IV	ACGT	2 cut(s)	786, 1341
HpyF10VI	GCNNNNNNNGC	6 cut(s)	335, 383, 436, 525, 796, 1480
HpyF3I	CTNAG	5 cut(s)	462, 515, 643, 1484, 1539
HpySE526I	ACGT	2 cut(s)	786, 1341
HspAI	GCGC	1 cut(s)	856
KroI	GCCGGC	1 cut(s)	1682
KroNI	GCCGGC	1 cut(s)	1684
Ksp22I	TGATCA	1 cut(s)	574
LguI	GCTCTTC	1 cut(s)	1387
LmnI	GCTCC	1 cut(s)	1251
Lsp1109I	GCAGC	4 cut(s)	35, 38, 259, 567
LweI	GCATC	3 cut(s)	480, 895, 1116
MaeI	CTAG	6 cut(s)	81, 608, 671, 960, 983, 1779
MaeII	ACGT	2 cut(s)	786, 1341
MaeIII	GTNAC	6 cut(s)	111, 139, 403, 1172, 1615, 1633
MfeI	CAATTG	1 cut(s)	491
MhlI	GDGCHC	6 cut(s)	76, 216, 712, 1043, 1504, 1759
MlsI	TGGCCA	1 cut(s)	1650
MluNI	TGGCCA	1 cut(s)	1650
MlyI	GAGTC	1 cut(s)	689
MmeI	TCCRAC	5 cut(s)	501, 751, 1337, 1644, 1680
Mox20I	TGGCCA	1 cut(s)	1650
MroNI	GCCGGC	1 cut(s)	1682
MscI	TGGCCA	1 cut(s)	1650
MseI	TTAA	8 cut(s)	626, 662, 818, 864, 1002, 1076, 1319, 1813
MslI	CAYNNNNRTG	1 cut(s)	785
Msp20I	TGGCCA	1 cut(s)	1650
MspCI	CTTAAG	2 cut(s)	817, 863
MspI	CCGG	2 cut(s)	150, 1683
MspR9I	CCNGG	1 cut(s)	150
MunI	CAATTG	1 cut(s)	491
Mva1269I	GAATGC	1 cut(s)	928
MwoI	GCNNNNNNNGC	6 cut(s)	335, 383, 436, 525, 796, 1480
NaeI	GCCGGC	1 cut(s)	1684
NciI	CCSGG	1 cut(s)	150
NgoMIV	GCCGGC	1 cut(s)	1682
NlaIV	GGNNCC	2 cut(s)	1183, 1247
NmuCI	GTSAC	3 cut(s)	403, 1172, 1615
PagI	TCATGA	1 cut(s)	738
PciSI	GCTCTTC	1 cut(s)	1387
PcsI	WCGNNNNNNNCGW	1 cut(s)	189
PctI	GAATGC	1 cut(s)	928
PdiI	GCCGGC	1 cut(s)	1684
PfeI	GAWTC	4 cut(s)	367, 584, 1309, 1418
PkrI	GCNGC	6 cut(s)	50, 53, 274, 557, 844, 979
Ple19I	CGATCG	1 cut(s)	192
PleI	GAGTC	1 cut(s)	689
PpsI	GAGTC	1 cut(s)	689
Ppu21I	YACGTR	1 cut(s)	787
PsiI	TTATAA	1 cut(s)	1524
Psp124BI	GAGCTC	1 cut(s)	76
PspEI	GGTNACC	1 cut(s)	1615
PspFI	CCCAGC	2 cut(s)	539, 1715
PspN4I	GGNNCC	2 cut(s)	1183, 1247
PspPI	GGNCC	4 cut(s)	147, 294, 979, 1168
PsrI	GAACNNNNNNTAC	2 cut(s)	879, 911
PstI	CTGCAG	1 cut(s)	1204
PvuI	CGATCG	1 cut(s)	192
RsaI	GTAC	4 cut(s)	635, 888, 1256, 1340
RsaNI	GTAC	4 cut(s)	634, 887, 1255, 1339
RseI	CAYNNNNRTG	1 cut(s)	785
SacI	GAGCTC	1 cut(s)	76
SapI	GCTCTTC	1 cut(s)	1387
SaqAI	TTAA	8 cut(s)	626, 662, 818, 864, 1002, 1076, 1319, 1813
SatI	GCNGC	6 cut(s)	49, 52, 273, 556, 843, 978
Sau96I	GGNCC	4 cut(s)	147, 294, 979, 1168
SbfI	CCTGCAGG	1 cut(s)	1204
SchI	GAGTC	1 cut(s)	689
ScrFI	CCNGG	1 cut(s)	150
SdaI	CCTGCAGG	1 cut(s)	1204
SduI	GDGCHC	6 cut(s)	76, 216, 712, 1043, 1504, 1759
SfaNI	GCATC	3 cut(s)	480, 895, 1116
SfcI	CTRYAG	1 cut(s)	1200
SinI	GGWCC	2 cut(s)	294, 1168
SmiMI	CAYNNNNRTG	1 cut(s)	785
SmlI	CTYRAG	2 cut(s)	817, 863
SmoI	CTYRAG	2 cut(s)	817, 863
Sse8387I	CCTGCAGG	1 cut(s)	1204
SsiI	CCGC	3 cut(s)	842, 977, 1586
SspMI	CTAG	6 cut(s)	81, 608, 671, 960, 983, 1779
SstI	GAGCTC	1 cut(s)	76
StyD4I	CCNGG	1 cut(s)	148
StyI	CCWWGG	1 cut(s)	349
TaaI	ACNGT	4 cut(s)	308, 319, 595, 1172
TaiI	ACGT	2 cut(s)	789, 1344
TaqI	TCGA	3 cut(s)	192, 776, 903
TauI	GCSGC	2 cut(s)	845, 980
TfiI	GAWTC	4 cut(s)	367, 584, 1309, 1418
Tru1I	TTAA	8 cut(s)	626, 662, 818, 864, 1002, 1076, 1319, 1813
Tru9I	TTAA	8 cut(s)	626, 662, 818, 864, 1002, 1076, 1319, 1813
TscAI	CASTG	1 cut(s)	541
TseFI	GTSAC	3 cut(s)	403, 1172, 1615
TseI	GCWGC	4 cut(s)	48, 51, 272, 555
Tsp45I	GTSAC	3 cut(s)	403, 1172, 1615
TspDTI	ATGAA	5 cut(s)	894, 900, 1011, 1314, 1562
TspRI	CASTG	1 cut(s)	541
Vha464I	CTTAAG	2 cut(s)	817, 863
VneI	GTGCAC	1 cut(s)	1039
VpaK11BI	GGWCC	2 cut(s)	294, 1168
XapI	RAATTY	4 cut(s)	356, 1187, 1517, 1732
XmiI	GTMKAC	2 cut(s)	126, 684
XspI	CTAG	6 cut(s)	81, 608, 671, 960, 983, 1779

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.