Rmu_sc0010846.1_g000006

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010846.1
OG0015659
Physical Location & Seq
Forward (+)
41102 .. 43393
2292 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010846.1_g000006.1.cds

Sequence Viewer

Length: 2175 bp
atggatacccttctctctaactccttgcttcccgctctttacgtaccccaacgacccttccctccattgaagaacaccatcagcaagtcctcttcaatccgaaacccaaaacccaagtcactccatttttctaccaactcaactcttccggcctctccacaacaagcacaacacagccttctcttcaatgaatggcctcagctcctcaaattctcaatcgggtccaaaaatctgatgctgggtcaggcaattcacgccttcttactcaaatgccggtgccaaactgacaccgacacatttcaaggcaacaatctcgtcaacatgtactcgaaattcaaaaggttggatgatgcacaccgggtattcgatgaaatgcctgagagaaacacaatcacttggactgctctaatgaaggggtattctgaggttggcgattatgcatctctttttcgcattgctcgggacatgtttcggggagaggagaagtttaatgagcatacttgctctgtgattttggaggcgtgtggttcactagaagagtcaagacgtggggaacaggttcatggttttgttgtaaaaagtgggcttcaggacaacgtttttgtagctacttcattggtctctatgtactctagaagtgactgcttgggcaatgccgagaaagtgttcggtgacatggatttcaaagatatccagtgcttaaattatatgattttagaatatgggagggccggcctcggagagaaagcaattggggtttttattgatcttctgagttccggtatagatccaaatgattatacatttactaatttaatcagtgcatgcagtggagatgtgggtgtgcatgaaggccggcaattacatgggctcgctgtgaagtatggaattatctgtgaaacttctgttggaaatgcagttataacaatgtacggaaagcatgggatgattgaagaggccgagacaatgttctatacagtggatgagaggaacttgatctcttggacagctgttttatcaatgtatgtcaaaaatggccctgttgataaggctctggatgttttcttgaaagtacttgatctaggcattcattgtgattctagttttttatgtactattcttgatgcctgctcagagtgcagaaatctggaattgggacgtcaaatccacgcgtgtgttacaaaacttggttattactctggtgttcatgttgggacagctttgatagacatatatgccaaatgtgggaactttcaatctgcaagaggggttttcgatggtctttcagattccataactttttcacggctccttagcttgtctgctgaggaagcctgcttggttatgggtaagagtcttcattcttatgctatcaaagctggacttgaagccaattccactgtaggtaatgctataattaccatgtatgccaaatgtggtagcattgaagaagcttttcaaatgttcaatggtatgaatagtcgcgattgtgtatcctggaatgccataatttcagcatatgctcttcatggagaaggcaccaaagcactttcactgtttgaaaatatgaaggaagaaggttttgctcctgatggaattacgttgttggctgttcttcaagcttgcagttactctggattatgggaaactgggttacgcttattcaacgaaatggagccaaaatatgggactaggtccgtgattgagcactttggttgcatggtcgatcttttgggtcgggctgggaaattttcagaagccatcgatttcatcaacacaagtccatttccagactcaccgatgctttggagaactttagtcaatgtctgcatgttatgtgggaatttaaattttggcattttagcttcaaagcatttgcttgagttggaacctgatgaggctgggtcatatatacttgtttcaaatatgtatgctggaggaggaatgtttgatgaggctgcaaaagttagaactgtaatgaatgacttgaaagtaaacaaagaagcaggttgcagctggattgaagtagataataagtttcattattttgtggcaagtgatatggaccatccgaaaagcgatgaaatttatcagaagttgaatctcttgaagattcaaataaaactgaacagtcatgatagaagtgatctctgtctggctgcagatcctttataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

724

Amino Acids

80.09

Weight (kDa)

5.46

Isoelectric Point (pI)

37.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015659)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g23520
malus_domestica MD12G1072400.v1.1 MD14G1069600.v1.1
pyrus_communis pycom12g06080 pycom14g05770
rosa_chinensis RchiOBHm_Chr3g0481521
rosa_laevigata RLG00000023390
rosa_multiflora Rmu_co8224982.1_g000001 Rmu_sc0010846.1_g000006
rosa_roxburghii Rroxscaffold_6G00400370
rosa_rugosa Rorug03G0192400
rosa_samantha Rh3AG243600 Rh3BG278500 Rh3CG273700 Rh3DG270500
rosa_wichuraiana Rw3G021760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 923, 2173
AatII GACGTC 1 cut(s) 1162
Acc36I ACCTGC 1 cut(s) 1997
AccB1I GGYRCC 2 cut(s) 276, 1538
AccB7I CCANNNNNTGG 1 cut(s) 1685
AccBSI CCGCTC 1 cut(s) 35
AccII CGCG 2 cut(s) 1172, 1485
AciI CCGC 1 cut(s) 33
AclI AACGTT 1 cut(s) 597
AclWI GGATC 2 cut(s) 782, 2159
AcsI RAATTY 6 cut(s) 209, 332, 1748, 1843, 1849, 2085
AcuI CTGAAG 1 cut(s) 572
AcyI GRCGYC 1 cut(s) 1159
AfaI GTAC 6 cut(s) 45, 326, 629, 932, 1074, 1114
AfiI CCNNNNNNNGG 2 cut(s) 1245, 1685
AflIII ACRYGT 3 cut(s) 321, 465, 1170
AjiI CACGTC 1 cut(s) 548
AjnI CCWGG 1 cut(s) 1496
AjuI GAANNNNNNNTTGG 2 cut(s) 891, 923
AleI CACNNNNGTG 1 cut(s) 1173
Alw21I GWGCWC 1 cut(s) 1710
Alw26I GTCTC 2 cut(s) 625, 956
AlwI GGATC 2 cut(s) 782, 2159
Ama87I CYCGRG 1 cut(s) 459
AoxI GGCC 7 cut(s) 150, 194, 729, 733, 853, 957, 1036
ApeKI GCWGC 3 cut(s) 1958, 2013, 2159
ApoI RAATTY 6 cut(s) 209, 332, 1748, 1843, 1849, 2085
ArsI GACNNNNNNTTYG 4 cut(s) 101, 133, 584, 616
Asp700I GAANNNNTTC 3 cut(s) 558, 665, 1455
AspS9I GGNCC 5 cut(s) 222, 729, 1037, 1695, 2065
AsuC2I CCSGG 1 cut(s) 359
AsuHPI GGTGA 2 cut(s) 683, 1788
AvaI CYCGRG 1 cut(s) 459
AvaII GGWCC 3 cut(s) 222, 1695, 2065
BanI GGYRCC 2 cut(s) 276, 1538
BanII GRGCYC 1 cut(s) 873
BbsI GAAGAC 1 cut(s) 1349
Bbv12I GWGCWC 1 cut(s) 1710
BbvCI CCTCAGC 2 cut(s) 198, 1326
BbvI GCAGC 3 cut(s) 1945, 2025, 2146
BccI CCATC 5 cut(s) 86, 1271, 1586, 1769, 2076
BceAI ACGGC 1 cut(s) 1322
BcgI CGANNNNNNTGC 2 cut(s) 295, 329
BciT130I CCWGG 1 cut(s) 1498
BciVI GTATCC 1 cut(s) 1504
BcnI CCSGG 1 cut(s) 359
BcoDI GTCTC 2 cut(s) 625, 956
BfaI CTAG 5 cut(s) 533, 633, 1082, 1101, 1692
BfmI CTRYAG 2 cut(s) 1401, 2160
BfuAI ACCTGC 1 cut(s) 1997
BfuI GTATCC 1 cut(s) 1504
BisI GCNGC 3 cut(s) 1959, 2014, 2160
BlsI GCNGC 3 cut(s) 1960, 2015, 2161
BmcAI AGTACT 1 cut(s) 1074
Bme1390I CCNGG 2 cut(s) 359, 1498
Bme18I GGWCC 3 cut(s) 222, 1695, 2065
BmeT110I CYCGRG 1 cut(s) 459
BmgBI CACGTC 1 cut(s) 548
BmgT120I GGNCC 5 cut(s) 222, 729, 1037, 1695, 2065
BmiI GGNNCC 6 cut(s) 223, 278, 1310, 1540, 1677, 1890
BmrFI CCNGG 2 cut(s) 359, 1498
BmrI ACTGGG 1 cut(s) 1659
BmsI GCATC 5 cut(s) 225, 340, 449, 1114, 1791
BmuI ACTGGG 1 cut(s) 1659
BpiI GAAGAC 1 cut(s) 1349
BpmI CTGGAG 1 cut(s) 1956
Bpu10I CCTNAGC 3 cut(s) 198, 1313, 1326
BpuEI CTTGAG 1 cut(s) 1901
BpuMI CCSGG 1 cut(s) 359
Bsa29I ATCGAT 1 cut(s) 1764
BsaAI YACGTR 1 cut(s) 43
BsaHI GRCGYC 1 cut(s) 1159
BsaI GGTCTC 1 cut(s) 625
BsaJI CCNNGG 1 cut(s) 736
BsaWI WCCGGW 1 cut(s) 779
Bsc4I CCNNNNNNNGG 2 cut(s) 1245, 1685
Bse118I RCCGGY 3 cut(s) 273, 731, 855
Bse1I ACTGG 2 cut(s) 694, 1654
Bse3DI GCAATG 2 cut(s) 453, 658
BseBI CCWGG 1 cut(s) 1498
BseCI ATCGAT 1 cut(s) 1764
BseDI CCNNGG 1 cut(s) 736
BseGI GGATG 5 cut(s) 352, 951, 988, 1063, 2068
BseLI CCNNNNNNNGG 2 cut(s) 1245, 1685
BseMI GCAATG 2 cut(s) 453, 658
BseMII CTCAG 6 cut(s) 212, 369, 414, 764, 1146, 1317
BseNI ACTGG 2 cut(s) 694, 1654
BseRI GAGGAG 3 cut(s) 194, 494, 1953
BseXI GCAGC 3 cut(s) 1945, 2025, 2146
BseYI CCCAGC 3 cut(s) 238, 1742, 1901
BsgI GTGCAG 1 cut(s) 1159
Bsh1236I CGCG 2 cut(s) 1172, 1485
BshFI GGCC 7 cut(s) 152, 196, 731, 735, 855, 959, 1038
BshNI GGYRCC 2 cut(s) 276, 1538
BshVI ATCGAT 1 cut(s) 1764
BsiHKAI GWGCWC 1 cut(s) 1710
BsiHKCI CYCGRG 1 cut(s) 459
BsiSI CCGG 6 cut(s) 149, 274, 358, 732, 780, 856
BslFI GGGAC 4 cut(s) 476, 1170, 1228, 1702
BslI CCNNNNNNNGG 2 cut(s) 1245, 1685
BsmAI GTCTC 2 cut(s) 625, 956
BsmFI GGGAC 4 cut(s) 476, 1170, 1228, 1702
BsmI GAATGC 2 cut(s) 1086, 1507
BsnI GGCC 7 cut(s) 152, 196, 731, 735, 855, 959, 1038
Bso31I GGTCTC 1 cut(s) 625
BsoBI CYCGRG 1 cut(s) 459
Bsp1286I GDGCHC 2 cut(s) 873, 1710
Bsp143I GATC 7 cut(s) 766, 787, 996, 1078, 1726, 2146, 2164
Bsp68I TCGCGA 1 cut(s) 1485
BspACI CCGC 1 cut(s) 33
BspANI GGCC 7 cut(s) 152, 196, 731, 735, 855, 959, 1038
BspCNI CTCAG 6 cut(s) 211, 370, 415, 765, 1145, 1318
BspDI ATCGAT 1 cut(s) 1764
BspFNI CGCG 2 cut(s) 1172, 1485
BspHI TCATGA 1 cut(s) 2134
BspLI GGNNCC 6 cut(s) 223, 278, 1310, 1540, 1677, 1890
BspMAI CTGCAG 1 cut(s) 2164
BspMI ACCTGC 1 cut(s) 1997
BspPI GGATC 2 cut(s) 782, 2159
BspQI GCTCTTC 1 cut(s) 1530
BspT107I GGYRCC 2 cut(s) 276, 1538
BspTNI GGTCTC 1 cut(s) 625
BsrBI CCGCTC 1 cut(s) 35
BsrDI GCAATG 2 cut(s) 453, 658
BsrFI RCCGGY 3 cut(s) 273, 731, 855
BsrI ACTGG 2 cut(s) 694, 1654
BssAI RCCGGY 3 cut(s) 273, 731, 855
BssECI CCNNGG 1 cut(s) 736
BssMI GATC 7 cut(s) 766, 787, 996, 1078, 1726, 2146, 2164
BssNI GRCGYC 1 cut(s) 1159
Bst2UI CCWGG 1 cut(s) 1498
Bst4CI ACNGT 5 cut(s) 979, 1402, 1557, 1975, 2132
Bst6I CTCTTC 6 cut(s) 97, 150, 188, 531, 948, 1530
BstACI GRCGYC 1 cut(s) 1159
BstBAI YACGTR 1 cut(s) 43
BstC8I GCNNGC 7 cut(s) 733, 826, 857, 873, 1129, 1336, 1624
BstDEI CTNAG 7 cut(s) 198, 378, 423, 773, 1132, 1313, 1326
BstF5I GGATG 5 cut(s) 352, 951, 988, 1063, 2068
BstFNI CGCG 2 cut(s) 1172, 1485
BstKTI GATC 7 cut(s) 769, 790, 999, 1081, 1729, 2149, 2167
BstMAI GTCTC 2 cut(s) 625, 956
BstMBI GATC 7 cut(s) 766, 787, 996, 1078, 1726, 2146, 2164
BstMWI GCNNNNNNNGC 4 cut(s) 254, 1137, 1331, 1376
BstNI CCWGG 1 cut(s) 1498
BstNSI RCATGY 4 cut(s) 325, 469, 828, 1834
BstSCI CCNGG 2 cut(s) 357, 1496
BstSFI CTRYAG 2 cut(s) 1401, 2160
BstSNI TACGTA 1 cut(s) 43
BstUI CGCG 2 cut(s) 1172, 1485
BstV1I GCAGC 3 cut(s) 1945, 2025, 2146
BstV2I GAAGAC 1 cut(s) 1349
BstX2I RGATCY 2 cut(s) 787, 2164
BstYI RGATCY 2 cut(s) 787, 2164
Bsu15I ATCGAT 1 cut(s) 1764
BsuI GTATCC 1 cut(s) 1504
BsuRI GGCC 7 cut(s) 152, 196, 731, 735, 855, 959, 1038
BsuTUI ATCGAT 1 cut(s) 1764
BtgZI GCGATG 1 cut(s) 2094
BtrI CACGTC 1 cut(s) 548
BtsCI GGATG 5 cut(s) 352, 951, 988, 1063, 2068
BtsI GCAGTG 1 cut(s) 835
BtsIMutI CAGTG 6 cut(s) 701, 826, 835, 984, 1398, 1553
BtuMI TCGCGA 1 cut(s) 1485
BveI ACCTGC 1 cut(s) 1997
Cac8I GCNNGC 7 cut(s) 733, 826, 857, 873, 1129, 1336, 1624
CciI TCATGA 1 cut(s) 2134
Cfr10I RCCGGY 3 cut(s) 273, 731, 855
Cfr13I GGNCC 5 cut(s) 222, 729, 1037, 1695, 2065
ClaI ATCGAT 1 cut(s) 1764
Csp6I GTAC 6 cut(s) 44, 325, 628, 931, 1073, 1113
CviQI GTAC 6 cut(s) 44, 325, 628, 931, 1073, 1113
DdeI CTNAG 7 cut(s) 198, 378, 423, 773, 1132, 1313, 1326
DpnI GATC 7 cut(s) 768, 789, 998, 1080, 1728, 2148, 2166
DpnII GATC 7 cut(s) 766, 787, 996, 1078, 1726, 2146, 2164
DraI TTTAAA 1 cut(s) 1848
Eam1104I CTCTTC 6 cut(s) 97, 150, 188, 531, 948, 1530
EarI CTCTTC 6 cut(s) 97, 150, 188, 531, 948, 1530
Eco105I TACGTA 1 cut(s) 43
Eco24I GRGCYC 1 cut(s) 873
Eco31I GGTCTC 1 cut(s) 625
Eco32I GATATC 1 cut(s) 691
Eco47I GGWCC 3 cut(s) 222, 1695, 2065
Eco57I CTGAAG 1 cut(s) 572
Eco88I CYCGRG 1 cut(s) 459
EcoRII CCWGG 1 cut(s) 1496
EcoRV GATATC 1 cut(s) 691
EcoT22I ATGCAT 1 cut(s) 442
EcoT38I GRGCYC 1 cut(s) 873
FalI AAGNNNNNCTT 2 cut(s) 1368, 1400
FaqI GGGAC 4 cut(s) 476, 1170, 1228, 1702
FauI CCCGC 1 cut(s) 40
FauNDI CATATG 1 cut(s) 1519
Fnu4HI GCNGC 3 cut(s) 1959, 2014, 2160
FokI GGATG 5 cut(s) 359, 958, 995, 1070, 2055
FriOI GRGCYC 1 cut(s) 873
FseI GGCCGGCC 1 cut(s) 735
Fsp4HI GCNGC 3 cut(s) 1959, 2014, 2160
FspBI CTAG 5 cut(s) 533, 633, 1082, 1101, 1692
GluI GCNGC 3 cut(s) 1959, 2014, 2160
GsaI CCCAGC 3 cut(s) 242, 1746, 1905
GsuI CTGGAG 1 cut(s) 1956
HaeIII GGCC 7 cut(s) 152, 196, 731, 735, 855, 959, 1038
HapII CCGG 6 cut(s) 149, 274, 358, 732, 780, 856
Hin1I GRCGYC 1 cut(s) 1159
HincII GTYRAC 1 cut(s) 319
HindII GTYRAC 1 cut(s) 319
HindIII AAGCTT 2 cut(s) 1452, 1620
HinfI GANTC 7 cut(s) 539, 1097, 1289, 1354, 1793, 2101, 2113
HpaII CCGG 6 cut(s) 149, 274, 358, 732, 780, 856
HphI GGTGA 2 cut(s) 683, 1788
Hpy166II GTNNAC 3 cut(s) 319, 530, 1996
Hpy8I GTNNAC 3 cut(s) 319, 530, 1996
HpyAV CCTTC 9 cut(s) 20, 67, 188, 268, 406, 845, 1529, 1564, 1571
HpyCH4III ACNGT 5 cut(s) 979, 1402, 1557, 1975, 2132
HpyCH4IV ACGT 5 cut(s) 42, 547, 597, 1159, 1601
HpyF10VI GCNNNNNNNGC 4 cut(s) 254, 1137, 1331, 1376
HpyF3I CTNAG 7 cut(s) 198, 378, 423, 773, 1132, 1313, 1326
HpySE526I ACGT 5 cut(s) 42, 547, 597, 1159, 1601
Hsp92I GRCGYC 1 cut(s) 1159
KroI GCCGGC 2 cut(s) 731, 855
KroNI GCCGGC 2 cut(s) 733, 857
Kzo9I GATC 7 cut(s) 766, 787, 996, 1078, 1726, 2146, 2164
LguI GCTCTTC 1 cut(s) 1530
LmnI GCTCC 4 cut(s) 207, 1314, 1591, 1675
Lsp1109I GCAGC 3 cut(s) 1945, 2025, 2146
LweI GCATC 5 cut(s) 225, 340, 449, 1114, 1791
MaeI CTAG 5 cut(s) 533, 633, 1082, 1101, 1692
MaeII ACGT 5 cut(s) 42, 547, 597, 1159, 1601
MaeIII GTNAC 6 cut(s) 117, 638, 671, 1177, 1628, 1653
MalI GATC 7 cut(s) 768, 789, 998, 1080, 1728, 2148, 2166
MbiI CCGCTC 1 cut(s) 35
MboI GATC 7 cut(s) 766, 787, 996, 1078, 1726, 2146, 2164
MfeI CAATTG 1 cut(s) 750
MflI RGATCY 2 cut(s) 787, 2164
MhlI GDGCHC 2 cut(s) 873, 1710
MluI ACGCGT 1 cut(s) 1170
MlyI GAGTC 3 cut(s) 548, 1363, 1787
MmeI TCCRAC 3 cut(s) 324, 889, 1866
Mph1103I ATGCAT 1 cut(s) 442
MroNI GCCGGC 2 cut(s) 731, 855
MroXI GAANNNNTTC 3 cut(s) 558, 665, 1455
MseI TTAA 4 cut(s) 489, 701, 815, 1847
MslI CAYNNNNRTG 2 cut(s) 1173, 1365
MspA1I CMGCKG 2 cut(s) 1010, 2016
MspI CCGG 6 cut(s) 149, 274, 358, 732, 780, 856
MspR9I CCNGG 2 cut(s) 359, 1498
MunI CAATTG 1 cut(s) 750
Mva1269I GAATGC 2 cut(s) 1086, 1507
MvaI CCWGG 1 cut(s) 1498
MvnI CGCG 2 cut(s) 1172, 1485
MwoI GCNNNNNNNGC 4 cut(s) 254, 1137, 1331, 1376
NaeI GCCGGC 2 cut(s) 733, 857
NciI CCSGG 1 cut(s) 359
NdeI CATATG 1 cut(s) 1519
NdeII GATC 7 cut(s) 766, 787, 996, 1078, 1726, 2146, 2164
NgoMIV GCCGGC 2 cut(s) 731, 855
NlaIV GGNNCC 6 cut(s) 223, 278, 1310, 1540, 1677, 1890
NmeAIII GCCGAG 2 cut(s) 682, 985
NmuCI GTSAC 3 cut(s) 117, 638, 671
NruI TCGCGA 1 cut(s) 1485
NsiI ATGCAT 1 cut(s) 442
NspI RCATGY 4 cut(s) 325, 469, 828, 1834
OliI CACNNNNGTG 1 cut(s) 1173
PaeI GCATGC 1 cut(s) 828
PagI TCATGA 1 cut(s) 2134
PciI ACATGT 2 cut(s) 321, 465
PciSI GCTCTTC 1 cut(s) 1530
PctI GAATGC 2 cut(s) 1086, 1507
PdiI GCCGGC 2 cut(s) 733, 857
PdmI GAANNNNTTC 3 cut(s) 558, 665, 1455
PfeI GAWTC 4 cut(s) 1097, 1289, 2101, 2113
PflFI GACNNNGTC 1 cut(s) 1693
PflMI CCANNNNNTGG 1 cut(s) 1685
PfoI TCCNGGA 1 cut(s) 1496
PkrI GCNGC 3 cut(s) 1960, 2015, 2161
PleI GAGTC 3 cut(s) 547, 1362, 1787
PpsI GAGTC 3 cut(s) 547, 1362, 1787
Ppu21I YACGTR 1 cut(s) 43
PscI ACATGT 2 cut(s) 321, 465
PsiI TTATAA 2 cut(s) 923, 2173
Psp1406I AACGTT 1 cut(s) 597
Psp6I CCWGG 1 cut(s) 1496
PspFI CCCAGC 3 cut(s) 238, 1742, 1901
PspGI CCWGG 1 cut(s) 1496
PspN4I GGNNCC 6 cut(s) 223, 278, 1310, 1540, 1677, 1890
PspPI GGNCC 5 cut(s) 222, 729, 1037, 1695, 2065
PstI CTGCAG 1 cut(s) 2164
PsuI RGATCY 2 cut(s) 787, 2164
PsyI GACNNNGTC 1 cut(s) 1693
PvuII CAGCTG 2 cut(s) 1010, 2016
RigI GGCCGGCC 1 cut(s) 735
RruI TCGCGA 1 cut(s) 1485
RsaI GTAC 6 cut(s) 45, 326, 629, 932, 1074, 1114
RsaNI GTAC 6 cut(s) 44, 325, 628, 931, 1073, 1113
RseI CAYNNNNRTG 2 cut(s) 1173, 1365
SapI GCTCTTC 1 cut(s) 1530
SaqAI TTAA 4 cut(s) 489, 701, 815, 1847
SatI GCNGC 3 cut(s) 1959, 2014, 2160
Sau3AI GATC 7 cut(s) 766, 787, 996, 1078, 1726, 2146, 2164
Sau96I GGNCC 5 cut(s) 222, 729, 1037, 1695, 2065
ScaI AGTACT 1 cut(s) 1074
SchI GAGTC 3 cut(s) 548, 1363, 1787
ScrFI CCNGG 2 cut(s) 359, 1498
SduI GDGCHC 2 cut(s) 873, 1710
SfaNI GCATC 5 cut(s) 225, 340, 449, 1114, 1791
SfcI CTRYAG 2 cut(s) 1401, 2160
SinI GGWCC 3 cut(s) 222, 1695, 2065
SmiI ATTTAAAT 1 cut(s) 1848
SmiMI CAYNNNNRTG 2 cut(s) 1173, 1365
SmlI CTYRAG 1 cut(s) 1880
SmoI CTYRAG 1 cut(s) 1880
SnaBI TACGTA 1 cut(s) 43
SphI GCATGC 1 cut(s) 828
SsiI CCGC 1 cut(s) 33
SspMI CTAG 5 cut(s) 533, 633, 1082, 1101, 1692
StyD4I CCNGG 2 cut(s) 357, 1496
SwaI ATTTAAAT 1 cut(s) 1848
TaaI ACNGT 5 cut(s) 979, 1402, 1557, 1975, 2132
TaiI ACGT 5 cut(s) 45, 550, 600, 1162, 1604
TaqI TCGA 5 cut(s) 329, 366, 1275, 1725, 1764
TatI WGTACW 4 cut(s) 324, 627, 1072, 1112
TfiI GAWTC 4 cut(s) 1097, 1289, 2101, 2113
Tru1I TTAA 4 cut(s) 489, 701, 815, 1847
Tru9I TTAA 4 cut(s) 489, 701, 815, 1847
TscAI CASTG 6 cut(s) 701, 826, 835, 984, 1405, 1560
TseFI GTSAC 3 cut(s) 117, 638, 671
TseI GCWGC 3 cut(s) 1958, 2013, 2159
Tsp45I GTSAC 3 cut(s) 117, 638, 671
TspGWI ACGGA 2 cut(s) 948, 1687
TspRI CASTG 6 cut(s) 701, 826, 835, 984, 1405, 1560
Tth111I GACNNNGTC 1 cut(s) 1693
Van91I CCANNNNNTGG 1 cut(s) 1685
VpaK11BI GGWCC 3 cut(s) 222, 1695, 2065
XapI RAATTY 6 cut(s) 209, 332, 1748, 1843, 1849, 2085
XbaI TCTAGA 1 cut(s) 632
XceI RCATGY 4 cut(s) 325, 469, 828, 1834
XmnI GAANNNNTTC 3 cut(s) 558, 665, 1455
XspI CTAG 5 cut(s) 533, 633, 1082, 1101, 1692
ZraI GACGTC 1 cut(s) 1160
ZrmI AGTACT 1 cut(s) 1074
Zsp2I ATGCAT 1 cut(s) 442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.