Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011843.1

Orthogroup ID

OG0010433

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 3618

Gene Structure 3617 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011843.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

atgacccacggatctattaagttgtcgttcttggatatgcttaggcctgtttctcagcaatggcaccttacagatcttttggcaatagtgaataaacttggtcacactcaagggtctgagactatggcgccaaaaagactggaatattcagggacgttggaattgctggatattgtgcatttttattctttcatgctaagaatgttttcattattgaatccaagggttggctcattgcctgtccttaatatgctatcgtttactcctggatttcttgtaagtctatggggagcgttggaaacctatctttttcctaggaatgtttgcagtggtcataaaccctatgatatcattagtaaaacttctggtagtggaaaagatgggaattttggaaaaaagaaaaagcatggcaataatgatggaggtaataagtgggtcagtgtccttcataaaattacgggtaaatcacaagcggagattaatcatacggatttgcgtggtaatcaacccaagcctagacttgttgaaaaagaggattcttctgatgtttgggatatagaacctgtgaggcctggtcctcaaggtatttcaagagacatgtcatatatgcttcatctattctgtgcaagctattcacacctgcttttgattcttgatgacatagagttttatgaaaaacaggtaccatttacactggagcaacaacggcaaattgcttctgttctcaatacattggtttataatgggttttctcaaagtattggacaggagggtagaccccttatggagtctgctgtcagatgcctgcatttaatatatgaaagggattgcaggcaccagttctgcccccctgttttgtggctttcacctgctagaaagaaccgcccaccaattgcggtagctgccagaactcatgaagttttgtcagctaatcaaaaatcagatgactctctggctgtgcaaagtataggctctgttataactacaactccgcatgtatttccatttgaagaaagagtggaaatgtttagagagtttatcaagatggacaaagcctcccggaaaatggctggtgaggtttctggccctagttcacgatcagttgagatagtagttcgtcgtggtcatattgttgaagatggatttcagcagttaaactccctgggatcaagattaaagtcatccatccatgtttcatttgtcagtgaatgtggccttccagaggctggcctcgactatggtggattatctaaagagtttttgaccgatatatcaaaagctgcatttgctcctgagtatgggctattctcccagacctcaacctcagccagacttctaattcctaatccatctgcaagatatctagataatggtatccagatgattgagttccttggaagagttgttgggaaagctctctatgaaggaatactgctagattactcattttctcatgtttttgtacaaaaactgttgggtcgatatagcttcctcgatgaactatcaacacttgatccagagatttacaggaatctcatgtatgttaagcattatgatggtgatgttgaggaactgtgtctggactttacggtaactgaagagtcatttggaaaacgacatgttattgagctcaagcctggtggaaaggatgttactgtgacaagcaagaacaaaatgcagtacatccatgcaattgctgattataagcttaaccgacagatgttccttttttcaaatgcattctatagagggttaattgatctcatatcaccatcttggctaaaattatttaatgcaggggaatttaatcagttgctttcagggggaaaccatgacattgatgttgatgacttgagaaagaacacacgatacactggtggttactctgaagggacccgaacgattaaaatcttttgggaggtattgaccctggactggaagttgatt

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

HECT

Protein Analysis

649

Amino Acids

73.36

Weight (kDa)

7.07

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010433)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53090 AT3G53090
fragaria_vesca	FvH4_6g17370
malus_domestica	MD12G1101300.v1.1 MD14G1095600.v1.1
prunus_persica	Prupe.7G121800_v2.0.a1
pyrus_communis	pycom14g09370
rosa_chinensis	RchiOBHm_Chr3g0471541
rosa_laevigata	RLG00000024156 RLG00000024169
rosa_multiflora	Rmu_sc0011843.1_g000001 Rmu_sc0039862.1_g000001 Rmu_ssc0000445.1_g000002
rosa_roxburghii	Rroxscaffold_6G00409820
rosa_rugosa	Rorug03G0118300 Rorug03G0118400
rosa_samantha	Rh3AG168500 Rh3BG194000 Rh3CG184500 Rh3DG181200
rosa_wichuraiana	Rw3G015880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	741, 980, 1704
AarI	CACCTGC	2 cut(s)	648, 877
Acc36I	ACCTGC	2 cut(s)	648, 877
Acc65I	GGTACC	1 cut(s)	682
AccB1I	GGYRCC	4 cut(s)	63, 127, 682, 834
AccB7I	CCANNNNNTGG	2 cut(s)	227, 1226
AccI	GTMKAC	1 cut(s)	775
AciI	CCGC	4 cut(s)	473, 883, 896, 992
AclWI	GGATC	3 cut(s)	19, 1174, 1508
AcsI	RAATTY	2 cut(s)	385, 1802
AcuI	CTGAAG	2 cut(s)	1617, 1908
AcyI	GRCGYC	1 cut(s)	128
AfaI	GTAC	3 cut(s)	684, 1464, 1682
AfiI	CCNNNNNNNGG	6 cut(s)	227, 1066, 1222, 1226, 1298, 1935
AflIII	ACRYGT	2 cut(s)	597, 1618
AgsI	TTSAA	6 cut(s)	217, 527, 591, 1010, 1136, 1734
AjnI	CCWGG	5 cut(s)	265, 571, 1161, 1636, 1929
AjuI	GAANNNNNNNTTGG	2 cut(s)	1590, 1622
AluBI	AGCT	8 cut(s)	630, 902, 929, 1280, 1415, 1488, 1630, 1708
AluI	AGCT	8 cut(s)	630, 902, 929, 1280, 1415, 1488, 1630, 1708
Alw21I	GWGCWC	1 cut(s)	1632
Alw26I	GTCTC	2 cut(s)	113, 588
AlwI	GGATC	3 cut(s)	19, 1174, 1508
AlwNI	CAGNNNCTG	1 cut(s)	1226
AoxI	GGCC	5 cut(s)	44, 569, 1084, 1213, 1228
ApeKI	GCWGC	2 cut(s)	902, 1280
ApoI	RAATTY	2 cut(s)	385, 1802
AseI	ATTAAT	1 cut(s)	480
Asp700I	GAANNNNTTC	1 cut(s)	205
Asp718I	GGTACC	1 cut(s)	682
AspA2I	CCTAGG	1 cut(s)	314
AspLEI	GCGC	1 cut(s)	130
AspS9I	GGNCC	3 cut(s)	575, 1085, 1893
AsuC2I	CCSGG	1 cut(s)	1060
AsuHPI	GGTGA	4 cut(s)	858, 1085, 1571, 1761
AvaII	GGWCC	2 cut(s)	575, 1893
AvrII	CCTAGG	1 cut(s)	314
BaeI	ACNNNNGTAYC	2 cut(s)	1861, 1894
BanI	GGYRCC	4 cut(s)	63, 127, 682, 834
BanII	GRGCYC	1 cut(s)	1632
Bbv12I	GWGCWC	1 cut(s)	1632
BbvCI	CCTCAGC	1 cut(s)	1324
BbvI	GCAGC	2 cut(s)	889, 1267
BccI	CCATC	8 cut(s)	374, 413, 1039, 1133, 1193, 1357, 1550, 1780
BceAI	ACGGC	1 cut(s)	722
BciT130I	CCWGG	5 cut(s)	267, 573, 1163, 1638, 1931
BciVI	GTATCC	1 cut(s)	1385
BcnI	CCSGG	1 cut(s)	1060
BcoDI	GTCTC	2 cut(s)	113, 588
BfaI	CTAG	6 cut(s)	315, 516, 873, 1089, 1364, 1436
BfmI	CTRYAG	1 cut(s)	1744
BfoI	RGCGCY	1 cut(s)	131
BfuAI	ACCTGC	2 cut(s)	648, 877
BfuI	GTATCC	1 cut(s)	1385
BglII	AGATCT	1 cut(s)	73
BisI	GCNGC	2 cut(s)	903, 1281
BlnI	CCTAGG	1 cut(s)	314
BlsI	GCNGC	2 cut(s)	904, 1282
Bme1390I	CCNGG	6 cut(s)	267, 573, 1060, 1163, 1638, 1931
Bme18I	GGWCC	2 cut(s)	575, 1893
BmgT120I	GGNCC	3 cut(s)	575, 1085, 1893
BmiI	GGNNCC	6 cut(s)	65, 129, 684, 836, 1894, 1895
BmrFI	CCNGG	6 cut(s)	267, 573, 1060, 1163, 1638, 1931
BmsI	GCATC	1 cut(s)	791
BpmI	CTGGAG	1 cut(s)	716
Bpu10I	CCTNAGC	2 cut(s)	41, 1324
BpuEI	CTTGAG	4 cut(s)	93, 564, 1616, 1873
BpuMI	CCSGG	1 cut(s)	1060
BsaBI	GATNNNNATC	1 cut(s)	1907
BsaHI	GRCGYC	1 cut(s)	128
BsaJI	CCNNGG	7 cut(s)	7, 221, 314, 1161, 1162, 1393, 1929
BsaXI	ACNNNNNCTCC	4 cut(s)	973, 1003, 1040, 1070
Bsc4I	CCNNNNNNNGG	6 cut(s)	227, 1066, 1222, 1226, 1298, 1935
Bse1I	ACTGG	5 cut(s)	144, 699, 838, 1879, 1940
Bse3DI	GCAATG	2 cut(s)	65, 233
Bse8I	GATNNNNATC	1 cut(s)	1907
BseBI	CCWGG	5 cut(s)	267, 573, 1163, 1638, 1931
BseDI	CCNNGG	7 cut(s)	7, 221, 314, 1161, 1162, 1393, 1929
BseGI	GGATG	4 cut(s)	1181, 1185, 1654, 1683
BseJI	GATNNNNATC	1 cut(s)	1907
BseLI	CCNNNNNNNGG	6 cut(s)	227, 1066, 1222, 1226, 1298, 1935
BseMI	GCAATG	2 cut(s)	65, 233
BseMII	CTCAG	4 cut(s)	68, 108, 1284, 1338
BseNI	ACTGG	5 cut(s)	144, 699, 838, 1879, 1940
BseXI	GCAGC	2 cut(s)	889, 1267
BshFI	GGCC	5 cut(s)	46, 571, 1086, 1215, 1230
BshNI	GGYRCC	4 cut(s)	63, 127, 682, 834
BsiHKAI	GWGCWC	1 cut(s)	1632
BsiSI	CCGG	1 cut(s)	1060
BslFI	GGGAC	2 cut(s)	166, 1906
BslI	CCNNNNNNNGG	6 cut(s)	227, 1066, 1222, 1226, 1298, 1935
BsmAI	GTCTC	2 cut(s)	113, 588
BsmFI	GGGAC	2 cut(s)	166, 1906
BsmI	GAATGC	1 cut(s)	1739
BsnI	GGCC	5 cut(s)	46, 571, 1086, 1215, 1230
Bsp1286I	GDGCHC	1 cut(s)	1632
Bsp1407I	TGTACA	1 cut(s)	1462
Bsp143I	GATC	6 cut(s)	11, 73, 1097, 1166, 1513, 1759
BspACI	CCGC	4 cut(s)	473, 883, 896, 992
BspANI	GGCC	5 cut(s)	46, 571, 1086, 1215, 1230
BspCNI	CTCAG	4 cut(s)	67, 109, 1285, 1337
BspHI	TCATGA	1 cut(s)	913
BspLI	GGNNCC	6 cut(s)	65, 129, 684, 836, 1894, 1895
BspMI	ACCTGC	2 cut(s)	648, 877
BspPI	GGATC	3 cut(s)	19, 1174, 1508
BspT107I	GGYRCC	4 cut(s)	63, 127, 682, 834
BsrDI	GCAATG	2 cut(s)	65, 233
BsrGI	TGTACA	1 cut(s)	1462
BsrI	ACTGG	5 cut(s)	144, 699, 838, 1879, 1940
BssECI	CCNNGG	7 cut(s)	7, 221, 314, 1161, 1162, 1393, 1929
BssMI	GATC	6 cut(s)	11, 73, 1097, 1166, 1513, 1759
BssNI	GRCGYC	1 cut(s)	128
BssT1I	CCWWGG	3 cut(s)	221, 314, 1393
Bst2UI	CCWGG	5 cut(s)	267, 573, 1163, 1638, 1931
Bst4CI	ACNGT	4 cut(s)	1473, 1575, 1591, 1657
Bst6I	CTCTTC	2 cut(s)	1393, 1593
BstACI	GRCGYC	1 cut(s)	128
BstAUI	TGTACA	1 cut(s)	1462
BstC8I	GCNNGC	4 cut(s)	628, 806, 833, 1228
BstDEI	CTNAG	6 cut(s)	41, 54, 117, 197, 1293, 1324
BstDSI	CCRYGG	1 cut(s)	7
BstENI	CCTNNNNNAGG	1 cut(s)	1220
BstF5I	GGATG	4 cut(s)	1181, 1185, 1654, 1683
BstH2I	RGCGCY	1 cut(s)	131
BstHHI	GCGC	1 cut(s)	130
BstKTI	GATC	6 cut(s)	14, 76, 1100, 1169, 1516, 1762
BstMAI	GTCTC	2 cut(s)	113, 588
BstMBI	GATC	6 cut(s)	11, 73, 1097, 1166, 1513, 1759
BstMWI	GCNNNNNNNGC	3 cut(s)	706, 902, 1286
BstNI	CCWGG	5 cut(s)	267, 573, 1163, 1638, 1931
BstNSI	RCATGY	3 cut(s)	601, 998, 1622
BstSCI	CCNGG	6 cut(s)	265, 571, 1058, 1161, 1636, 1929
BstSFI	CTRYAG	1 cut(s)	1744
BstV1I	GCAGC	2 cut(s)	889, 1267
BstX2I	RGATCY	2 cut(s)	11, 73
BstYI	RGATCY	2 cut(s)	11, 73
BsuI	GTATCC	1 cut(s)	1385
BsuRI	GGCC	5 cut(s)	46, 571, 1086, 1215, 1230
BtgI	CCRYGG	1 cut(s)	7
BtsCI	GGATG	4 cut(s)	1181, 1185, 1654, 1683
BtsI	GCAGTG	1 cut(s)	334
BtsIMutI	CAGTG	5 cut(s)	334, 445, 692, 1210, 1872
BveI	ACCTGC	2 cut(s)	648, 877
Cac8I	GCNNGC	4 cut(s)	628, 806, 833, 1228
CaiI	CAGNNNCTG	1 cut(s)	1226
CciI	TCATGA	1 cut(s)	913
CfoI	GCGC	1 cut(s)	130
Cfr13I	GGNCC	3 cut(s)	575, 1085, 1893
Csp6I	GTAC	3 cut(s)	683, 1463, 1681
CspCI	CAANNNNNGTGG	2 cut(s)	1621, 1656
CviQI	GTAC	3 cut(s)	683, 1463, 1681
DdeI	CTNAG	6 cut(s)	41, 54, 117, 197, 1293, 1324
DinI	GGCGCC	1 cut(s)	129
DpnI	GATC	6 cut(s)	13, 75, 1099, 1168, 1515, 1761
DpnII	GATC	6 cut(s)	11, 73, 1097, 1166, 1513, 1759
Eam1104I	CTCTTC	2 cut(s)	1393, 1593
EarI	CTCTTC	2 cut(s)	1393, 1593
Ecl136II	GAGCTC	1 cut(s)	1630
Eco130I	CCWWGG	3 cut(s)	221, 314, 1393
Eco147I	AGGCCT	2 cut(s)	46, 571
Eco24I	GRGCYC	1 cut(s)	1632
Eco32I	GATATC	2 cut(s)	349, 1361
Eco47I	GGWCC	2 cut(s)	575, 1893
Eco53kI	GAGCTC	1 cut(s)	1630
Eco57I	CTGAAG	2 cut(s)	1617, 1908
EcoICRI	GAGCTC	1 cut(s)	1630
EcoNI	CCTNNNNNAGG	1 cut(s)	1220
EcoO109I	RGGNCCY	1 cut(s)	1893
EcoRII	CCWGG	5 cut(s)	265, 571, 1161, 1636, 1929
EcoRV	GATATC	2 cut(s)	349, 1361
EcoT14I	CCWWGG	3 cut(s)	221, 314, 1393
EcoT22I	ATGCAT	1 cut(s)	1741
EcoT38I	GRGCYC	1 cut(s)	1632
EgeI	GGCGCC	1 cut(s)	129
EheI	GGCGCC	1 cut(s)	129
ErhI	CCWWGG	3 cut(s)	221, 314, 1393
FaqI	GGGAC	2 cut(s)	166, 1906
FblI	GTMKAC	1 cut(s)	775
Fnu4HI	GCNGC	2 cut(s)	903, 1281
FokI	GGATG	4 cut(s)	1168, 1172, 1661, 1670
FriOI	GRGCYC	1 cut(s)	1632
Fsp4HI	GCNGC	2 cut(s)	903, 1281
FspBI	CTAG	6 cut(s)	315, 516, 873, 1089, 1364, 1436
GlaI	GCGC	1 cut(s)	129
GluI	GCNGC	2 cut(s)	903, 1281
GsuI	CTGGAG	1 cut(s)	716
HaeII	RGCGCY	1 cut(s)	131
HaeIII	GGCC	5 cut(s)	46, 571, 1086, 1215, 1230
HapII	CCGG	1 cut(s)	1060
HhaI	GCGC	1 cut(s)	130
Hin1I	GRCGYC	1 cut(s)	128
Hin6I	GCGC	1 cut(s)	128
HinP1I	GCGC	1 cut(s)	128
HindIII	AAGCTT	1 cut(s)	1706
HinfI	GANTC	7 cut(s)	217, 536, 649, 788, 947, 1531, 1601
HpaII	CCGG	1 cut(s)	1060
HphI	GGTGA	4 cut(s)	858, 1085, 1571, 1761
Hpy166II	GTNNAC	3 cut(s)	261, 776, 1094
Hpy188I	TCNGA	5 cut(s)	118, 544, 800, 943, 1888
Hpy8I	GTNNAC	3 cut(s)	261, 776, 1094
Hpy99I	CGWCG	1 cut(s)	1122
HpyAV	CCTTC	4 cut(s)	455, 1226, 1418, 1883
HpyCH4III	ACNGT	4 cut(s)	1473, 1575, 1591, 1657
HpyCH4IV	ACGT	1 cut(s)	155
HpyF10VI	GCNNNNNNNGC	3 cut(s)	706, 902, 1286
HpyF3I	CTNAG	6 cut(s)	41, 54, 117, 197, 1293, 1324
HpySE526I	ACGT	1 cut(s)	155
Hsp92I	GRCGYC	1 cut(s)	128
HspAI	GCGC	1 cut(s)	128
KasI	GGCGCC	1 cut(s)	127
KflI	GGGWCCC	1 cut(s)	1893
KpnI	GGTACC	1 cut(s)	686
Kzo9I	GATC	6 cut(s)	11, 73, 1097, 1166, 1513, 1759
LmnI	GCTCC	3 cut(s)	290, 697, 1294
Lsp1109I	GCAGC	2 cut(s)	889, 1267
LweI	GCATC	1 cut(s)	791
MaeI	CTAG	6 cut(s)	315, 516, 873, 1089, 1364, 1436
MaeII	ACGT	1 cut(s)	155
MaeIII	GTNAC	5 cut(s)	101, 1591, 1651, 1657, 1880
MalI	GATC	6 cut(s)	13, 75, 1099, 1168, 1515, 1761
MboI	GATC	6 cut(s)	11, 73, 1097, 1166, 1513, 1759
MboII	GAAGA	5 cut(s)	531, 1022, 1148, 1410, 1610
MfeI	CAATTG	2 cut(s)	891, 1692
MflI	RGATCY	2 cut(s)	11, 73
MhlI	GDGCHC	1 cut(s)	1632
Mly113I	GGCGCC	1 cut(s)	128
MlyI	GAGTC	3 cut(s)	797, 941, 1610
MmeI	TCCRAC	2 cut(s)	138, 276
Mph1103I	ATGCAT	1 cut(s)	1741
MroXI	GAANNNNTTC	1 cut(s)	205
MslI	CAYNNNNRTG	1 cut(s)	1554
MspI	CCGG	1 cut(s)	1060
MspR9I	CCNGG	6 cut(s)	267, 573, 1060, 1163, 1638, 1931
MunI	CAATTG	2 cut(s)	891, 1692
Mva1269I	GAATGC	1 cut(s)	1739
MvaI	CCWGG	5 cut(s)	267, 573, 1163, 1638, 1931
MwoI	GCNNNNNNNGC	3 cut(s)	706, 902, 1286
NarI	GGCGCC	1 cut(s)	128
NciI	CCSGG	1 cut(s)	1060
NdeII	GATC	6 cut(s)	11, 73, 1097, 1166, 1513, 1759
NlaIV	GGNNCC	6 cut(s)	65, 129, 684, 836, 1894, 1895
NmuCI	GTSAC	2 cut(s)	101, 1657
NsiI	ATGCAT	1 cut(s)	1741
NspI	RCATGY	3 cut(s)	601, 998, 1622
PagI	TCATGA	1 cut(s)	913
PaqCI	CACCTGC	2 cut(s)	648, 877
PasI	CCCWGGG	1 cut(s)	1162
PceI	AGGCCT	2 cut(s)	46, 571
PciI	ACATGT	2 cut(s)	597, 1618
PctI	GAATGC	1 cut(s)	1739
PdmI	GAANNNNTTC	1 cut(s)	205
PfeI	GAWTC	4 cut(s)	217, 536, 649, 1531
PflMI	CCANNNNNTGG	2 cut(s)	227, 1226
PfoI	TCCNGGA	2 cut(s)	265, 1058
PkrI	GCNGC	2 cut(s)	904, 1282
PleI	GAGTC	3 cut(s)	796, 941, 1609
PluTI	GGCGCC	1 cut(s)	131
PpsI	GAGTC	3 cut(s)	796, 941, 1609
PpuMI	RGGWCCY	1 cut(s)	1893
PscI	ACATGT	2 cut(s)	597, 1618
PshBI	ATTAAT	1 cut(s)	480
PsiI	TTATAA	3 cut(s)	741, 980, 1704
Psp124BI	GAGCTC	1 cut(s)	1632
Psp5II	RGGWCCY	1 cut(s)	1893
Psp6I	CCWGG	5 cut(s)	265, 571, 1161, 1636, 1929
PspGI	CCWGG	5 cut(s)	265, 571, 1161, 1636, 1929
PspN4I	GGNNCC	6 cut(s)	65, 129, 684, 836, 1894, 1895
PspPI	GGNCC	3 cut(s)	575, 1085, 1893
PspPPI	RGGWCCY	1 cut(s)	1893
PsrI	GAACNNNNNNTAC	2 cut(s)	1853, 1885
PstNI	CAGNNNCTG	1 cut(s)	1226
PsuI	RGATCY	2 cut(s)	11, 73
RsaI	GTAC	3 cut(s)	684, 1464, 1682
RsaNI	GTAC	3 cut(s)	683, 1463, 1681
RseI	CAYNNNNRTG	1 cut(s)	1554
SacI	GAGCTC	1 cut(s)	1632
SatI	GCNGC	2 cut(s)	903, 1281
Sau3AI	GATC	6 cut(s)	11, 73, 1097, 1166, 1513, 1759
Sau96I	GGNCC	3 cut(s)	575, 1085, 1893
SchI	GAGTC	3 cut(s)	797, 941, 1610
ScrFI	CCNGG	6 cut(s)	267, 573, 1060, 1163, 1638, 1931
SduI	GDGCHC	1 cut(s)	1632
SfaNI	GCATC	1 cut(s)	791
SfcI	CTRYAG	1 cut(s)	1744
SfoI	GGCGCC	1 cut(s)	129
SinI	GGWCC	2 cut(s)	575, 1893
SmiMI	CAYNNNNRTG	1 cut(s)	1554
SmlI	CTYRAG	4 cut(s)	108, 579, 1631, 1852
SmoI	CTYRAG	4 cut(s)	108, 579, 1631, 1852
SseBI	AGGCCT	2 cut(s)	46, 571
SsiI	CCGC	4 cut(s)	473, 883, 896, 992
SspDI	GGCGCC	1 cut(s)	127
SspI	AATATT	1 cut(s)	146
SspMI	CTAG	6 cut(s)	315, 516, 873, 1089, 1364, 1436
SstI	GAGCTC	1 cut(s)	1632
StuI	AGGCCT	2 cut(s)	46, 571
StyD4I	CCNGG	6 cut(s)	265, 571, 1058, 1161, 1636, 1929
StyI	CCWWGG	3 cut(s)	221, 314, 1393
TaaI	ACNGT	4 cut(s)	1473, 1575, 1591, 1657
TaiI	ACGT	1 cut(s)	158
TaqI	TCGA	3 cut(s)	1233, 1480, 1494
TaqII	GACCGA	1 cut(s)	1280
TatI	WGTACW	2 cut(s)	1462, 1680
TfiI	GAWTC	4 cut(s)	217, 536, 649, 1531
TscAI	CASTG	5 cut(s)	334, 445, 699, 1210, 1879
TseFI	GTSAC	2 cut(s)	101, 1657
TseI	GCWGC	2 cut(s)	902, 1280
Tsp45I	GTSAC	2 cut(s)	101, 1657
TspGWI	ACGGA	2 cut(s)	24, 503
TspRI	CASTG	5 cut(s)	334, 445, 699, 1210, 1879
Van91I	CCANNNNNTGG	2 cut(s)	227, 1226
VpaK11BI	GGWCC	2 cut(s)	575, 1893
VspI	ATTAAT	1 cut(s)	480
XagI	CCTNNNNNAGG	1 cut(s)	1220
XapI	RAATTY	2 cut(s)	385, 1802
XbaI	TCTAGA	1 cut(s)	1363
XceI	RCATGY	3 cut(s)	601, 998, 1622
XmaJI	CCTAGG	1 cut(s)	314
XmiI	GTMKAC	1 cut(s)	775
XmnI	GAANNNNTTC	1 cut(s)	205
XspI	CTAG	6 cut(s)	315, 516, 873, 1089, 1364, 1436
Zsp2I	ATGCAT	1 cut(s)	1741

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.