Rmu_sc0014812.1_g000013

Belongs to the glycosyltransferase 2 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014812.1
Physical Location & Seq
Forward (+)
48995 .. 51165
2171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014812.1_g000013.1.cds

Sequence Viewer

Length: 1227 bp
atggcctcagaatctccaatcaatacatcaatcgggtcccctaggcttcgccgtgttagccaaacaagccatgatctaaacagtgacattgggggtgtcgaattcgcaacctacacagtccacataccctccacacctgacaacaaccccatgtcagcttccatggagtactccacttctcagagagtggaggaccaattcgtctccagctctctcttcaccggcggttacaattgcgtcacgcaagcccagctgaaggaaaaggtcattgaatcacagaccagctaccatccccagatgactggggcaaaggggtctttctgcgccgtgccgggttgtgatgctaaggtggtgactgatgagaggggactggatattctcccttgtgaatgtgactacaagatttgtatggattgttttagggatgctgtgagaaatggtgaccacatgtgtcctggctgcaaggagccttataaggagttggatgtgaccgagtatgctgtgcataatcgaaagcagtatcagcagcagatgtcgaaaacagagaggaggatgtcgttgatgaagtcgacgaaggtgatggggcgccagagtagcgagtttgatcacaacaagtggttgtttgagacaaaggggagttatggatatggaaacgctatttggccaaaggttgatgtggaagggagtcaagatgggattgggggagatccgatggtgtttcatgataagcaatggaggcctcttacgcgcaagttgaatatctctgctgcaattctcagtccatataggcttttaatatttgttcgaatggtggtccttggattatttttgcaatggagaatcagaaatccaaatgaagatgctgtctggttgtgggctatgtcagtggtttgtgaaatctggtttgccatctcatggctacttgatcagcttccaaagctctgccccattaatcgcattaccaatctcgatgtgttaaaggagaaatttgaaacaccgagcctcagcaatcctactggaaaatctgatcttccaggtatagacatttttgtctctacagcagatccagagaaagaaccacctcttgttaccgcaaacacaattctgtcgattcttgcagctgactaccctgttgagaagcttgcatgttatgtttctgatgatggaggtgcacttttgacatttgaggccatggccgaagctgctagttttgccaacttgtgggta
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

409

Amino Acids

45.76

Weight (kDa)

5.31

Isoelectric Point (pI)

45.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 474
AasI GACNNNNNNGTC 2 cut(s) 200, 1049
AccB1I GGYRCC 1 cut(s) 585
AccB7I CCANNNNNTGG 2 cut(s) 915, 1221
AccI GTMKAC 1 cut(s) 569
AccII CGCG 1 cut(s) 748
AciI CCGC 2 cut(s) 225, 1092
AclWI GGATC 2 cut(s) 701, 1058
AcoI YGGCCR 2 cut(s) 662, 1194
AcsI RAATTY 2 cut(s) 101, 986
AcuI CTGAAG 1 cut(s) 275
AcyI GRCGYC 1 cut(s) 586
AfaI GTAC 1 cut(s) 170
AfiI CCNNNNNNNGG 3 cut(s) 256, 915, 1221
AflIII ACRYGT 1 cut(s) 447
AgsI TTSAA 3 cut(s) 272, 757, 992
AjnI CCWGG 2 cut(s) 454, 1033
AjuI GAANNNNNNNTTGG 2 cut(s) 643, 675
AluBI AGCT 9 cut(s) 158, 210, 253, 285, 931, 940, 1121, 1141, 1202
AluI AGCT 9 cut(s) 158, 210, 253, 285, 931, 940, 1121, 1141, 1202
Alw21I GWGCWC 1 cut(s) 1174
Alw26I GTCTC 3 cut(s) 208, 620, 1057
Alw44I GTGCAC 1 cut(s) 1170
AlwI GGATC 2 cut(s) 701, 1058
AoxI GGCC 5 cut(s) 3, 662, 737, 1188, 1194
ApaLI GTGCAC 1 cut(s) 1170
ApeKI GCWGC 5 cut(s) 459, 526, 767, 1118, 1202
ApoI RAATTY 2 cut(s) 101, 986
AseI ATTAAT 1 cut(s) 951
AspA2I CCTAGG 1 cut(s) 41
AspLEI GCGC 3 cut(s) 326, 588, 750
AspS9I GGNCC 3 cut(s) 36, 193, 814
AsuC2I CCSGG 1 cut(s) 333
AsuHPI GGTGA 4 cut(s) 211, 364, 452, 589
AsuII TTCGAA 1 cut(s) 805
AvaII GGWCC 3 cut(s) 36, 193, 814
AvrII CCTAGG 1 cut(s) 41
BaeGI GKGCMC 1 cut(s) 1174
BalI TGGCCA 1 cut(s) 664
BanI GGYRCC 1 cut(s) 585
Bbv12I GWGCWC 1 cut(s) 1174
BbvCI CCTCAGC 1 cut(s) 1004
BbvI GCAGC 5 cut(s) 446, 538, 754, 1130, 1189
BccI CCATC 6 cut(s) 297, 574, 686, 706, 917, 1157
BceAI ACGGC 2 cut(s) 36, 311
BciT130I CCWGG 2 cut(s) 456, 1035
BclI TGATCA 2 cut(s) 604, 925
BcnI CCSGG 1 cut(s) 333
BcoDI GTCTC 3 cut(s) 208, 620, 1057
BfaI CTAG 2 cut(s) 42, 1206
BfmI CTRYAG 1 cut(s) 1056
BfoI RGCGCY 1 cut(s) 589
BisI GCNGC 5 cut(s) 460, 527, 768, 1119, 1203
BlnI CCTAGG 1 cut(s) 41
BlsI GCNGC 5 cut(s) 461, 528, 769, 1120, 1204
BmcAI AGTACT 1 cut(s) 170
Bme1390I CCNGG 3 cut(s) 333, 456, 1035
Bme18I GGWCC 3 cut(s) 36, 193, 814
BmgT120I GGNCC 3 cut(s) 36, 193, 814
BmiI GGNNCC 4 cut(s) 37, 38, 468, 587
BmrFI CCNGG 3 cut(s) 333, 456, 1035
BmrI ACTGGG 1 cut(s) 312
BmsI GCATC 3 cut(s) 331, 415, 850
BmuI ACTGGG 1 cut(s) 312
BpmI CTGGAG 1 cut(s) 190
Bpu10I CCTNAGC 2 cut(s) 345, 1004
Bpu14I TTCGAA 1 cut(s) 805
BpuMI CCSGG 1 cut(s) 333
BsaHI GRCGYC 1 cut(s) 586
BsaJI CCNNGG 4 cut(s) 41, 162, 817, 1191
BsaXI ACNNNNNCTCC 2 cut(s) 113, 143
Bsc4I CCNNNNNNNGG 3 cut(s) 256, 915, 1221
Bse118I RCCGGY 1 cut(s) 221
Bse1I ACTGG 3 cut(s) 307, 375, 1021
Bse3DI GCAATG 2 cut(s) 737, 839
BseBI CCWGG 2 cut(s) 456, 1035
BseDI CCNNGG 4 cut(s) 41, 162, 817, 1191
BseGI GGATG 4 cut(s) 289, 430, 490, 558
BseLI CCNNNNNNNGG 3 cut(s) 256, 915, 1221
BseMI GCAATG 2 cut(s) 737, 839
BseMII CTCAG 4 cut(s) 21, 194, 790, 1018
BseNI ACTGG 3 cut(s) 307, 375, 1021
BseRI GAGGAG 1 cut(s) 562
BseSI GKGCMC 1 cut(s) 1174
BseXI GCAGC 5 cut(s) 446, 538, 754, 1130, 1189
BseYI CCCAGC 1 cut(s) 249
Bsh1236I CGCG 1 cut(s) 748
BshFI GGCC 5 cut(s) 5, 664, 739, 1190, 1196
BshNI GGYRCC 1 cut(s) 585
BsiHKAI GWGCWC 1 cut(s) 1174
BsiSI CCGG 2 cut(s) 222, 332
BslFI GGGAC 2 cut(s) 22, 381
BslI CCNNNNNNNGG 3 cut(s) 256, 915, 1221
BsmAI GTCTC 3 cut(s) 208, 620, 1057
BsmBI CGTCTC 1 cut(s) 208
BsmFI GGGAC 2 cut(s) 22, 381
BsnI GGCC 5 cut(s) 5, 664, 739, 1190, 1196
Bsp119I TTCGAA 1 cut(s) 805
Bsp1286I GDGCHC 1 cut(s) 1174
Bsp143I GATC 6 cut(s) 73, 604, 706, 925, 1027, 1063
Bsp19I CCATGG 2 cut(s) 162, 1191
BspACI CCGC 2 cut(s) 225, 1092
BspANI GGCC 5 cut(s) 5, 664, 739, 1190, 1196
BspCNI CTCAG 4 cut(s) 20, 193, 789, 1017
BspFNI CGCG 1 cut(s) 748
BspHI TCATGA 1 cut(s) 721
BspLI GGNNCC 4 cut(s) 37, 38, 468, 587
BspPI GGATC 2 cut(s) 701, 1058
BspT104I TTCGAA 1 cut(s) 805
BspT107I GGYRCC 1 cut(s) 585
BsrDI GCAATG 2 cut(s) 737, 839
BsrFI RCCGGY 1 cut(s) 221
BsrI ACTGG 3 cut(s) 307, 375, 1021
BssAI RCCGGY 1 cut(s) 221
BssECI CCNNGG 4 cut(s) 41, 162, 817, 1191
BssMI GATC 6 cut(s) 73, 604, 706, 925, 1027, 1063
BssNI GRCGYC 1 cut(s) 586
BssT1I CCWWGG 4 cut(s) 41, 162, 817, 1191
Bst2UI CCWGG 2 cut(s) 456, 1035
Bst4CI ACNGT 2 cut(s) 83, 118
Bst6I CTCTTC 1 cut(s) 221
BstACI GRCGYC 1 cut(s) 586
BstBI TTCGAA 1 cut(s) 805
BstC8I GCNNGC 2 cut(s) 246, 1143
BstDEI CTNAG 5 cut(s) 7, 180, 345, 776, 1004
BstDSI CCRYGG 2 cut(s) 162, 1191
BstEII GGTNACC 1 cut(s) 440
BstF5I GGATG 4 cut(s) 289, 430, 490, 558
BstFNI CGCG 1 cut(s) 748
BstH2I RGCGCY 1 cut(s) 589
BstHHI GCGC 3 cut(s) 326, 588, 750
BstKTI GATC 6 cut(s) 76, 607, 709, 928, 1030, 1066
BstMAI GTCTC 3 cut(s) 208, 620, 1057
BstMBI GATC 6 cut(s) 73, 604, 706, 925, 1027, 1063
BstNI CCWGG 2 cut(s) 456, 1035
BstNSI RCATGY 2 cut(s) 451, 1149
BstPI GGTNACC 1 cut(s) 440
BstSCI CCNGG 3 cut(s) 331, 454, 1033
BstSFI CTRYAG 1 cut(s) 1056
BstSLI GKGCMC 1 cut(s) 1174
BstUI CGCG 1 cut(s) 748
BstV1I GCAGC 5 cut(s) 446, 538, 754, 1130, 1189
BstX2I RGATCY 2 cut(s) 706, 1063
BstXI CCANNNNNNTGG 1 cut(s) 302
BstYI RGATCY 2 cut(s) 706, 1063
BsuRI GGCC 5 cut(s) 5, 664, 739, 1190, 1196
BtgI CCRYGG 2 cut(s) 162, 1191
BtsCI GGATG 4 cut(s) 289, 430, 490, 558
BtsIMutI CAGTG 2 cut(s) 88, 891
Cac8I GCNNGC 2 cut(s) 246, 1143
CciI TCATGA 1 cut(s) 721
CfoI GCGC 3 cut(s) 326, 588, 750
Cfr10I RCCGGY 1 cut(s) 221
Cfr13I GGNCC 3 cut(s) 36, 193, 814
CseI GACGC 1 cut(s) 226
Csp6I GTAC 1 cut(s) 169
CviAII CATG 8 cut(s) 71, 151, 163, 448, 722, 915, 1146, 1192
CviQI GTAC 1 cut(s) 169
DdeI CTNAG 5 cut(s) 7, 180, 345, 776, 1004
DinI GGCGCC 1 cut(s) 587
DpnI GATC 6 cut(s) 75, 606, 708, 927, 1029, 1065
DpnII GATC 6 cut(s) 73, 604, 706, 925, 1027, 1063
DrdI GACNNNNNNGTC 2 cut(s) 200, 1049
DseDI GACNNNNNNGTC 2 cut(s) 200, 1049
EaeI YGGCCR 2 cut(s) 662, 1194
Eam1104I CTCTTC 1 cut(s) 221
EarI CTCTTC 1 cut(s) 221
Eco130I CCWWGG 4 cut(s) 41, 162, 817, 1191
Eco147I AGGCCT 1 cut(s) 739
Eco47I GGWCC 3 cut(s) 36, 193, 814
Eco57I CTGAAG 1 cut(s) 275
Eco91I GGTNACC 1 cut(s) 440
EcoO109I RGGNCCY 1 cut(s) 36
EcoO65I GGTNACC 1 cut(s) 440
EcoRI GAATTC 1 cut(s) 101
EcoRII CCWGG 2 cut(s) 454, 1033
EcoT14I CCWWGG 4 cut(s) 41, 162, 817, 1191
EgeI GGCGCC 1 cut(s) 587
EheI GGCGCC 1 cut(s) 587
ErhI CCWWGG 4 cut(s) 41, 162, 817, 1191
Esp3I CGTCTC 1 cut(s) 208
FaeI CATG 8 cut(s) 74, 154, 166, 451, 725, 918, 1149, 1195
FaqI GGGAC 2 cut(s) 22, 381
FatI CATG 8 cut(s) 70, 150, 162, 447, 721, 914, 1145, 1191
FbaI TGATCA 2 cut(s) 604, 925
FblI GTMKAC 1 cut(s) 569
Fnu4HI GCNGC 5 cut(s) 460, 527, 768, 1119, 1203
FokI GGATG 4 cut(s) 276, 437, 497, 565
Fsp4HI GCNGC 5 cut(s) 460, 527, 768, 1119, 1203
FspBI CTAG 2 cut(s) 42, 1206
GlaI GCGC 3 cut(s) 325, 587, 749
GluI GCNGC 5 cut(s) 460, 527, 768, 1119, 1203
GsaI CCCAGC 1 cut(s) 253
GsuI CTGGAG 1 cut(s) 190
HaeII RGCGCY 1 cut(s) 589
HaeIII GGCC 5 cut(s) 5, 664, 739, 1190, 1196
HapII CCGG 2 cut(s) 222, 332
HgaI GACGC 1 cut(s) 226
HhaI GCGC 3 cut(s) 326, 588, 750
Hin1I GRCGYC 1 cut(s) 586
Hin1II CATG 8 cut(s) 74, 154, 166, 451, 725, 918, 1149, 1195
Hin6I GCGC 3 cut(s) 324, 586, 748
HinP1I GCGC 3 cut(s) 324, 586, 748
HincII GTYRAC 1 cut(s) 570
HindII GTYRAC 1 cut(s) 570
HindIII AAGCTT 1 cut(s) 1139
HinfI GANTC 5 cut(s) 11, 272, 685, 840, 1111
HpaII CCGG 2 cut(s) 222, 332
HphI GGTGA 4 cut(s) 211, 364, 452, 589
Hpy166II GTNNAC 3 cut(s) 121, 570, 1172
Hpy188I TCNGA 6 cut(s) 10, 183, 711, 845, 1027, 1159
Hpy188III TCNNGA 4 cut(s) 689, 722, 968, 1067
Hpy8I GTNNAC 3 cut(s) 121, 570, 1172
Hpy99I CGWCG 1 cut(s) 574
HpyAV CCTTC 3 cut(s) 250, 568, 674
HpyCH4III ACNGT 2 cut(s) 83, 118
HpyCH4V TGCA 7 cut(s) 462, 505, 770, 832, 1118, 1145, 1172
HpyF3I CTNAG 5 cut(s) 7, 180, 345, 776, 1004
Hsp92I GRCGYC 1 cut(s) 586
Hsp92II CATG 8 cut(s) 74, 154, 166, 451, 725, 918, 1149, 1195
HspAI GCGC 3 cut(s) 324, 586, 748
KasI GGCGCC 1 cut(s) 585
KflI GGGWCCC 1 cut(s) 36
Ksp22I TGATCA 2 cut(s) 604, 925
Kzo9I GATC 6 cut(s) 73, 604, 706, 925, 1027, 1063
LmnI GCTCC 1 cut(s) 466
Lsp1109I GCAGC 5 cut(s) 446, 538, 754, 1130, 1189
LweI GCATC 3 cut(s) 331, 415, 850
MaeI CTAG 2 cut(s) 42, 1206
MaeIII GTNAC 8 cut(s) 83, 227, 238, 352, 392, 440, 487, 1087
MalI GATC 6 cut(s) 75, 606, 708, 927, 1029, 1065
MboI GATC 6 cut(s) 73, 604, 706, 925, 1027, 1063
MboII GAAGA 3 cut(s) 208, 869, 1022
MfeI CAATTG 1 cut(s) 232
MflI RGATCY 2 cut(s) 706, 1063
MhlI GDGCHC 1 cut(s) 1174
MlsI TGGCCA 1 cut(s) 664
MluCI AATT 6 cut(s) 101, 197, 232, 771, 986, 1101
MluNI TGGCCA 1 cut(s) 664
Mly113I GGCGCC 1 cut(s) 586
MlyI GAGTC 1 cut(s) 694
MmeI TCCRAC 1 cut(s) 462
Mox20I TGGCCA 1 cut(s) 664
MscI TGGCCA 1 cut(s) 664
MseI TTAA 3 cut(s) 794, 951, 977
Msp20I TGGCCA 1 cut(s) 664
MspA1I CMGCKG 2 cut(s) 253, 1121
MspI CCGG 2 cut(s) 222, 332
MspR9I CCNGG 3 cut(s) 333, 456, 1035
MunI CAATTG 1 cut(s) 232
MvaI CCWGG 2 cut(s) 456, 1035
MvnI CGCG 1 cut(s) 748
NarI GGCGCC 1 cut(s) 586
NciI CCSGG 1 cut(s) 333
NcoI CCATGG 2 cut(s) 162, 1191
NdeII GATC 6 cut(s) 73, 604, 706, 925, 1027, 1063
NlaIII CATG 8 cut(s) 74, 154, 166, 451, 725, 918, 1149, 1195
NlaIV GGNNCC 4 cut(s) 37, 38, 468, 587
NmuCI GTSAC 6 cut(s) 83, 238, 352, 392, 440, 487
NspI RCATGY 2 cut(s) 451, 1149
NspV TTCGAA 1 cut(s) 805
PagI TCATGA 1 cut(s) 721
PceI AGGCCT 1 cut(s) 739
PciI ACATGT 1 cut(s) 447
PfeI GAWTC 4 cut(s) 11, 272, 840, 1111
PflMI CCANNNNNTGG 2 cut(s) 915, 1221
PkrI GCNGC 5 cut(s) 461, 528, 769, 1120, 1204
PleI GAGTC 1 cut(s) 693
PluTI GGCGCC 1 cut(s) 589
PpsI GAGTC 1 cut(s) 693
PpuMI RGGWCCY 1 cut(s) 36
PscI ACATGT 1 cut(s) 447
PshBI ATTAAT 1 cut(s) 951
PsiI TTATAA 1 cut(s) 474
Psp5II RGGWCCY 1 cut(s) 36
Psp6I CCWGG 2 cut(s) 454, 1033
PspEI GGTNACC 1 cut(s) 440
PspFI CCCAGC 1 cut(s) 249
PspGI CCWGG 2 cut(s) 454, 1033
PspN4I GGNNCC 4 cut(s) 37, 38, 468, 587
PspPI GGNCC 3 cut(s) 36, 193, 814
PspPPI RGGWCCY 1 cut(s) 36
PsuI RGATCY 2 cut(s) 706, 1063
PvuII CAGCTG 2 cut(s) 253, 1121
RsaI GTAC 1 cut(s) 170
RsaNI GTAC 1 cut(s) 169
SalI GTCGAC 1 cut(s) 568
SaqAI TTAA 3 cut(s) 794, 951, 977
SatI GCNGC 5 cut(s) 460, 527, 768, 1119, 1203
Sau3AI GATC 6 cut(s) 73, 604, 706, 925, 1027, 1063
Sau96I GGNCC 3 cut(s) 36, 193, 814
ScaI AGTACT 1 cut(s) 170
SchI GAGTC 1 cut(s) 694
ScrFI CCNGG 3 cut(s) 333, 456, 1035
SduI GDGCHC 1 cut(s) 1174
SfaNI GCATC 3 cut(s) 331, 415, 850
SfcI CTRYAG 1 cut(s) 1056
SfoI GGCGCC 1 cut(s) 587
SfuI TTCGAA 1 cut(s) 805
SgrAI CRCCGGYG 1 cut(s) 221
SinI GGWCC 3 cut(s) 36, 193, 814
Sse9I AATT 6 cut(s) 101, 197, 232, 771, 986, 1101
SseBI AGGCCT 1 cut(s) 739
SsiI CCGC 2 cut(s) 225, 1092
SspDI GGCGCC 1 cut(s) 585
SspI AATATT 1 cut(s) 798
SspMI CTAG 2 cut(s) 42, 1206
StuI AGGCCT 1 cut(s) 739
StyD4I CCNGG 3 cut(s) 331, 454, 1033
StyI CCWWGG 4 cut(s) 41, 162, 817, 1191
TaaI ACNGT 2 cut(s) 83, 118
TaqI TCGA 7 cut(s) 99, 511, 536, 569, 805, 969, 1109
TaqII GACCGA 1 cut(s) 506
TasI AATT 6 cut(s) 101, 197, 232, 771, 986, 1101
TatI WGTACW 1 cut(s) 168
TfiI GAWTC 4 cut(s) 11, 272, 840, 1111
Tru1I TTAA 3 cut(s) 794, 951, 977
Tru9I TTAA 3 cut(s) 794, 951, 977
TscAI CASTG 2 cut(s) 88, 891
TseFI GTSAC 6 cut(s) 83, 238, 352, 392, 440, 487
TseI GCWGC 5 cut(s) 459, 526, 767, 1118, 1202
Tsp45I GTSAC 6 cut(s) 83, 238, 352, 392, 440, 487
TspDTI ATGAA 3 cut(s) 578, 710, 870
TspRI CASTG 2 cut(s) 88, 891
Van91I CCANNNNNTGG 2 cut(s) 915, 1221
VneI GTGCAC 1 cut(s) 1170
VpaK11BI GGWCC 3 cut(s) 36, 193, 814
VspI ATTAAT 1 cut(s) 951
XapI RAATTY 2 cut(s) 101, 986
XceI RCATGY 2 cut(s) 451, 1149
XcmI CCANNNNNNNNNTGG 1 cut(s) 452
XmaJI CCTAGG 1 cut(s) 41
XmiI GTMKAC 1 cut(s) 569
XspI CTAG 2 cut(s) 42, 1206
ZrmI AGTACT 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.