TMV resistance protein N-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 |
| rosa_chinensis | RchiOBHm_Chr1g0375971 |
| rosa_laevigata | RLG00000026639 |
| rosa_multiflora | Rmu_sc0024503.1_g000001 Rmu_ssc0000116.1_g000001 Rmu_ssc0000116.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00282460 |
| rosa_rugosa | Rorug01G0393100 Rorug01G0393200 Rorug02G0306500 Rorug02G0306600 |
| rosa_wichuraiana | Rw0G010340 Rw1G035880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2174 |
| Acc36I | ACCTGC | 3 cut(s) | 2547, 4349, 5016 |
| AccB1I | GGYRCC | 2 cut(s) | 1501, 6034 |
| AccI | GTMKAC | 2 cut(s) | 770, 6012 |
| AccII | CGCG | 2 cut(s) | 24, 171 |
| AccIII | TCCGGA | 2 cut(s) | 3160, 3760 |
| AclI | AACGTT | 1 cut(s) | 5103 |
| AclWI | GGATC | 8 cut(s) | 410, 1517, 3478, 4014, 4104, 4690, 5003, 5434 |
| AcoI | YGGCCR | 3 cut(s) | 1527, 5586, 6029 |
| AcuI | CTGAAG | 8 cut(s) | 478, 1359, 3231, 4079, 4558, 5417, 5475, 5726 |
| AcvI | CACGTG | 1 cut(s) | 372 |
| AcyI | GRCGYC | 3 cut(s) | 27, 119, 147 |
| AdeI | CACNNNGTG | 1 cut(s) | 4634 |
| AfaI | GTAC | 5 cut(s) | 4017, 4422, 4616, 4955, 5494 |
| AflII | CTTAAG | 8 cut(s) | 2867, 2903, 3035, 3115, 3365, 3848, 5149, 5573 |
| AflIII | ACRYGT | 1 cut(s) | 371 |
| AgeI | ACCGGT | 1 cut(s) | 863 |
| AhlI | ACTAGT | 1 cut(s) | 5227 |
| AjiI | CACGTC | 1 cut(s) | 2101 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2115, 2147, 4434, 4466 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 294, 326, 2568, 2600, 4881, 4913 |
| Alw21I | GWGCWC | 7 cut(s) | 871, 1303, 1347, 2602, 4651, 5514, 5849 |
| Alw44I | GTGCAC | 2 cut(s) | 867, 5510 |
| AlwI | GGATC | 8 cut(s) | 410, 1517, 3478, 4014, 4104, 4690, 5003, 5434 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1372, 5805 |
| Ama87I | CYCGRG | 3 cut(s) | 908, 1025, 5654 |
| Aor13HI | TCCGGA | 2 cut(s) | 3160, 3760 |
| AoxI | GGCC | 7 cut(s) | 783, 1259, 1285, 1527, 4986, 5586, 6029 |
| ApaI | GGGCCC | 1 cut(s) | 4990 |
| ApaLI | GTGCAC | 2 cut(s) | 867, 5510 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 482, 514 |
| AsiGI | ACCGGT | 1 cut(s) | 863 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1362, 2013, 4305, 5001, 5739 |
| AspLEI | GCGC | 3 cut(s) | 173, 1601, 3399 |
| AspS9I | GGNCC | 6 cut(s) | 1259, 1459, 2693, 4986, 4987, 6129 |
| AsuC2I | CCSGG | 3 cut(s) | 425, 941, 3136 |
| AsuHPI | GGTGA | 8 cut(s) | 114, 799, 895, 1312, 1367, 1976, 5309, 6170 |
| AsuII | TTCGAA | 1 cut(s) | 2033 |
| AsuNHI | GCTAGC | 1 cut(s) | 1180 |
| AvaI | CYCGRG | 3 cut(s) | 908, 1025, 5654 |
| AvaII | GGWCC | 3 cut(s) | 1459, 2693, 6129 |
| AxyI | CCTNAGG | 2 cut(s) | 2223, 4134 |
| BaeGI | GKGCMC | 3 cut(s) | 871, 4990, 5514 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 3524, 3557, 4687, 4720 |
| BanI | GGYRCC | 2 cut(s) | 1501, 6034 |
| BanII | GRGCYC | 6 cut(s) | 253, 1303, 1347, 2331, 2602, 4990 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1275, 1307 |
| BauI | CACGAG | 3 cut(s) | 598, 795, 4200 |
| BbrPI | CACGTG | 1 cut(s) | 372 |
| BbsI | GAAGAC | 3 cut(s) | 3506, 4799, 5423 |
| Bbv12I | GWGCWC | 7 cut(s) | 871, 1303, 1347, 2602, 4651, 5514, 5849 |
| BbvCI | CCTCAGC | 1 cut(s) | 2444 |
| BceAI | ACGGC | 8 cut(s) | 82, 2289, 2766, 2996, 3223, 3860, 4646, 5753 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1261, 1295, 3871, 3905 |
| BciVI | GTATCC | 4 cut(s) | 289, 296, 1474, 2612 |
| BclI | TGATCA | 1 cut(s) | 1152 |
| BcnI | CCSGG | 3 cut(s) | 425, 941, 3136 |
| BcuI | ACTAGT | 1 cut(s) | 5227 |
| BfmI | CTRYAG | 5 cut(s) | 529, 3880, 4882, 5563, 5806 |
| BfrI | CTTAAG | 8 cut(s) | 2867, 2903, 3035, 3115, 3365, 3848, 5149, 5573 |
| BfuAI | ACCTGC | 3 cut(s) | 2547, 4349, 5016 |
| BfuI | GTATCC | 4 cut(s) | 289, 296, 1474, 2612 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 144 |
| BglII | AGATCT | 2 cut(s) | 1275, 4910 |
| BlpI | GCTNAGC | 1 cut(s) | 235 |
| Bme18I | GGWCC | 3 cut(s) | 1459, 2693, 6129 |
| BmeT110I | CYCGRG | 3 cut(s) | 908, 1025, 5654 |
| BmgBI | CACGTC | 1 cut(s) | 2101 |
| BmgT120I | GGNCC | 6 cut(s) | 1259, 1459, 2693, 4986, 4987, 6129 |
| BmiI | GGNNCC | 9 cut(s) | 945, 951, 1035, 1503, 2330, 4988, 5380, 6036, 6130 |
| BmrI | ACTGGG | 1 cut(s) | 2694 |
| BmtI | GCTAGC | 1 cut(s) | 1184 |
| BmuI | ACTGGG | 1 cut(s) | 2694 |
| BoxI | GACNNNNGTC | 1 cut(s) | 910 |
| BpiI | GAAGAC | 3 cut(s) | 3506, 4799, 5423 |
| BpmI | CTGGAG | 2 cut(s) | 213, 5092 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2066, 2444 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 235 |
| Bpu14I | TTCGAA | 1 cut(s) | 2033 |
| BpuMI | CCSGG | 3 cut(s) | 425, 941, 3136 |
| BsaAI | YACGTR | 2 cut(s) | 372, 4424 |
| BsaBI | GATNNNNATC | 1 cut(s) | 414 |
| BsaHI | GRCGYC | 3 cut(s) | 27, 119, 147 |
| BsaI | GGTCTC | 1 cut(s) | 3941 |
| BsaWI | WCCGGW | 4 cut(s) | 863, 946, 3160, 3760 |
| Bse118I | RCCGGY | 3 cut(s) | 863, 1504, 6031 |
| Bse1I | ACTGG | 4 cut(s) | 304, 1099, 1461, 2700 |
| Bse21I | CCTNAGG | 2 cut(s) | 2223, 4134 |
| Bse3DI | GCAATG | 5 cut(s) | 36, 842, 3426, 4194, 6093 |
| Bse8I | GATNNNNATC | 1 cut(s) | 414 |
| BseAI | TCCGGA | 2 cut(s) | 3160, 3760 |
| BseJI | GATNNNNATC | 1 cut(s) | 414 |
| BseMI | GCAATG | 5 cut(s) | 36, 842, 3426, 4194, 6093 |
| BseNI | ACTGG | 4 cut(s) | 304, 1099, 1461, 2700 |
| BseSI | GKGCMC | 3 cut(s) | 871, 4990, 5514 |
| BseX3I | CGGCCG | 1 cut(s) | 1527 |
| BseYI | CCCAGC | 4 cut(s) | 82, 1163, 1656, 2635 |
| BsgI | GTGCAG | 2 cut(s) | 4355, 5758 |
| Bsh1236I | CGCG | 2 cut(s) | 24, 171 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1530 |
| BshFI | GGCC | 7 cut(s) | 785, 1261, 1287, 1529, 4988, 5588, 6031 |
| BshNI | GGYRCC | 2 cut(s) | 1501, 6034 |
| BshTI | ACCGGT | 1 cut(s) | 863 |
| BsiEI | CGRYCG | 1 cut(s) | 1530 |
| BsiHKAI | GWGCWC | 7 cut(s) | 871, 1303, 1347, 2602, 4651, 5514, 5849 |
| BsiHKCI | CYCGRG | 3 cut(s) | 908, 1025, 5654 |
| BslFI | GGGAC | 5 cut(s) | 134, 724, 3697, 3814, 4524 |
| BsmBI | CGTCTC | 1 cut(s) | 3898 |
| BsmFI | GGGAC | 5 cut(s) | 134, 724, 3697, 3814, 4524 |
| BsmI | GAATGC | 4 cut(s) | 740, 1478, 3315, 4360 |
| BsnI | GGCC | 7 cut(s) | 785, 1261, 1287, 1529, 4988, 5588, 6031 |
| Bso31I | GGTCTC | 1 cut(s) | 3941 |
| BsoBI | CYCGRG | 3 cut(s) | 908, 1025, 5654 |
| Bsp119I | TTCGAA | 1 cut(s) | 2033 |
| Bsp120I | GGGCCC | 1 cut(s) | 4986 |
| Bsp13I | TCCGGA | 2 cut(s) | 3160, 3760 |
| Bsp1407I | TGTACA | 1 cut(s) | 5492 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 235 |
| BspANI | GGCC | 7 cut(s) | 785, 1261, 1287, 1529, 4988, 5588, 6031 |
| BspEI | TCCGGA | 2 cut(s) | 3160, 3760 |
| BspFNI | CGCG | 2 cut(s) | 24, 171 |
| BspHI | TCATGA | 1 cut(s) | 5257 |
| BspLI | GGNNCC | 9 cut(s) | 945, 951, 1035, 1503, 2330, 4988, 5380, 6036, 6130 |
| BspMAI | CTGCAG | 2 cut(s) | 3884, 5567 |
| BspMI | ACCTGC | 3 cut(s) | 2547, 4349, 5016 |
| BspOI | GCTAGC | 1 cut(s) | 1184 |
| BspPI | GGATC | 8 cut(s) | 410, 1517, 3478, 4014, 4104, 4690, 5003, 5434 |
| BspQI | GCTCTTC | 2 cut(s) | 1335, 3597 |
| BspT104I | TTCGAA | 1 cut(s) | 2033 |
| BspT107I | GGYRCC | 2 cut(s) | 1501, 6034 |
| BspTI | CTTAAG | 8 cut(s) | 2867, 2903, 3035, 3115, 3365, 3848, 5149, 5573 |
| BspTNI | GGTCTC | 1 cut(s) | 3941 |
| BsrDI | GCAATG | 5 cut(s) | 36, 842, 3426, 4194, 6093 |
| BsrFI | RCCGGY | 3 cut(s) | 863, 1504, 6031 |
| BsrGI | TGTACA | 1 cut(s) | 5492 |
| BsrI | ACTGG | 4 cut(s) | 304, 1099, 1461, 2700 |
| BssAI | RCCGGY | 3 cut(s) | 863, 1504, 6031 |
| BssNAI | GTATAC | 1 cut(s) | 771 |
| BssNI | GRCGYC | 3 cut(s) | 27, 119, 147 |
| BssSI | CACGAG | 3 cut(s) | 598, 795, 4200 |
| BssT1I | CCWWGG | 1 cut(s) | 4725 |
| Bst1107I | GTATAC | 1 cut(s) | 771 |
| Bst2BI | CACGAG | 3 cut(s) | 598, 795, 4200 |
| Bst4CI | ACNGT | 9 cut(s) | 310, 824, 1837, 2144, 2277, 4156, 4241, 4744, 5423 |
| BstACI | GRCGYC | 3 cut(s) | 27, 119, 147 |
| BstAFI | CTTAAG | 8 cut(s) | 2867, 2903, 3035, 3115, 3365, 3848, 5149, 5573 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1984, 3099 |
| BstAUI | TGTACA | 1 cut(s) | 5492 |
| BstBAI | YACGTR | 2 cut(s) | 372, 4424 |
| BstBI | TTCGAA | 1 cut(s) | 2033 |
| BstDSI | CCRYGG | 1 cut(s) | 2978 |
| BstFNI | CGCG | 2 cut(s) | 24, 171 |
| BstHHI | GCGC | 3 cut(s) | 173, 1601, 3399 |
| BstMCI | CGRYCG | 1 cut(s) | 1530 |
| BstNSI | RCATGY | 6 cut(s) | 724, 2065, 2505, 3100, 4818, 5347 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 910 |
| BstSFI | CTRYAG | 5 cut(s) | 529, 3880, 4882, 5563, 5806 |
| BstSLI | GKGCMC | 3 cut(s) | 871, 4990, 5514 |
| BstSNI | TACGTA | 1 cut(s) | 4424 |
| BstUI | CGCG | 2 cut(s) | 24, 171 |
| BstV2I | GAAGAC | 3 cut(s) | 3506, 4799, 5423 |
| BstX2I | RGATCY | 6 cut(s) | 1275, 1522, 4006, 4682, 4910, 5439 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 163, 1765, 3982, 4084, 5523 |
| BstYI | RGATCY | 6 cut(s) | 1275, 1522, 4006, 4682, 4910, 5439 |
| BstZ17I | GTATAC | 1 cut(s) | 771 |
| BstZI | CGGCCG | 1 cut(s) | 1527 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2223, 4134 |
| BsuI | GTATCC | 4 cut(s) | 289, 296, 1474, 2612 |
| BsuRI | GGCC | 7 cut(s) | 785, 1261, 1287, 1529, 4988, 5588, 6031 |
| BtgI | CCRYGG | 1 cut(s) | 2978 |
| BtrI | CACGTC | 1 cut(s) | 2101 |
| BtsIMutI | CAGTG | 7 cut(s) | 306, 558, 1335, 1833, 4237, 5419, 5908 |
| BveI | ACCTGC | 3 cut(s) | 2547, 4349, 5016 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1372, 5805 |
| CciI | TCATGA | 1 cut(s) | 5257 |
| CfoI | GCGC | 3 cut(s) | 173, 1601, 3399 |
| Cfr10I | RCCGGY | 3 cut(s) | 863, 1504, 6031 |
| Cfr13I | GGNCC | 6 cut(s) | 1259, 1459, 2693, 4986, 4987, 6129 |
| CseI | GACGC | 4 cut(s) | 35, 108, 136, 2365 |
| Csp6I | GTAC | 5 cut(s) | 4016, 4421, 4615, 4954, 5493 |
| CspAI | ACCGGT | 1 cut(s) | 863 |
| CviQI | GTAC | 5 cut(s) | 4016, 4421, 4615, 4954, 5493 |
| DraI | TTTAAA | 1 cut(s) | 2512 |
| DraIII | CACNNNGTG | 1 cut(s) | 4634 |
| EaeI | YGGCCR | 3 cut(s) | 1527, 5586, 6029 |
| EagI | CGGCCG | 1 cut(s) | 1527 |
| EciI | GGCGGA | 2 cut(s) | 43, 84 |
| Ecl136II | GAGCTC | 3 cut(s) | 1301, 1345, 2600 |
| EclXI | CGGCCG | 1 cut(s) | 1527 |
| Eco105I | TACGTA | 1 cut(s) | 4424 |
| Eco130I | CCWWGG | 1 cut(s) | 4725 |
| Eco24I | GRGCYC | 6 cut(s) | 253, 1303, 1347, 2331, 2602, 4990 |
| Eco31I | GGTCTC | 1 cut(s) | 3941 |
| Eco47I | GGWCC | 3 cut(s) | 1459, 2693, 6129 |
| Eco52I | CGGCCG | 1 cut(s) | 1527 |
| Eco53kI | GAGCTC | 3 cut(s) | 1301, 1345, 2600 |
| Eco57I | CTGAAG | 8 cut(s) | 478, 1359, 3231, 4079, 4558, 5417, 5475, 5726 |
| Eco72I | CACGTG | 1 cut(s) | 372 |
| Eco81I | CCTNAGG | 2 cut(s) | 2223, 4134 |
| Eco88I | CYCGRG | 3 cut(s) | 908, 1025, 5654 |
| EcoICRI | GAGCTC | 3 cut(s) | 1301, 1345, 2600 |
| EcoO109I | RGGNCCY | 2 cut(s) | 4986, 6129 |
| EcoRI | GAATTC | 2 cut(s) | 3995, 5602 |
| EcoT14I | CCWWGG | 1 cut(s) | 4725 |
| EcoT22I | ATGCAT | 3 cut(s) | 1478, 2646, 6093 |
| EcoT38I | GRGCYC | 6 cut(s) | 253, 1303, 1347, 2331, 2602, 4990 |
| ErhI | CCWWGG | 1 cut(s) | 4725 |
| Esp3I | CGTCTC | 1 cut(s) | 3898 |
| FaqI | GGGAC | 5 cut(s) | 134, 724, 3697, 3814, 4524 |
| FauI | CCCGC | 4 cut(s) | 143, 160, 1035, 4997 |
| FauNDI | CATATG | 2 cut(s) | 1672, 3321 |
| FbaI | TGATCA | 1 cut(s) | 1152 |
| FblI | GTMKAC | 2 cut(s) | 770, 6012 |
| FriOI | GRGCYC | 6 cut(s) | 253, 1303, 1347, 2331, 2602, 4990 |
| GlaI | GCGC | 3 cut(s) | 172, 1600, 3398 |
| GsaI | CCCAGC | 4 cut(s) | 86, 1167, 1660, 2639 |
| GsuI | CTGGAG | 2 cut(s) | 213, 5092 |
| HaeIII | GGCC | 7 cut(s) | 785, 1261, 1287, 1529, 4988, 5588, 6031 |
| HgaI | GACGC | 4 cut(s) | 35, 108, 136, 2365 |
| HhaI | GCGC | 3 cut(s) | 173, 1601, 3399 |
| Hin1I | GRCGYC | 3 cut(s) | 27, 119, 147 |
| Hin6I | GCGC | 3 cut(s) | 171, 1599, 3397 |
| HinP1I | GCGC | 3 cut(s) | 171, 1599, 3397 |
| HincII | GTYRAC | 7 cut(s) | 1050, 2204, 2709, 2739, 2806, 3243, 3704 |
| HindII | GTYRAC | 7 cut(s) | 1050, 2204, 2709, 2739, 2806, 3243, 3704 |
| HindIII | AAGCTT | 4 cut(s) | 1397, 2452, 5384, 5687 |
| HpaI | GTTAAC | 1 cut(s) | 2739 |
| HphI | GGTGA | 8 cut(s) | 114, 799, 895, 1312, 1367, 1976, 5309, 6170 |
| Hpy99I | CGWCG | 5 cut(s) | 29, 190, 217, 2685, 4940 |
| HpyCH4III | ACNGT | 9 cut(s) | 310, 824, 1837, 2144, 2277, 4156, 4241, 4744, 5423 |
| HpyCH4IV | ACGT | 7 cut(s) | 371, 2100, 3812, 4108, 4423, 4930, 5103 |
| HpySE526I | ACGT | 7 cut(s) | 371, 2100, 3812, 4108, 4423, 4930, 5103 |
| Hsp92I | GRCGYC | 3 cut(s) | 27, 119, 147 |
| HspAI | GCGC | 3 cut(s) | 171, 1599, 3397 |
| Kpn2I | TCCGGA | 2 cut(s) | 3160, 3760 |
| Ksp22I | TGATCA | 1 cut(s) | 1152 |
| KspAI | GTTAAC | 1 cut(s) | 2739 |
| LguI | GCTCTTC | 2 cut(s) | 1335, 3597 |
| LmnI | GCTCC | 9 cut(s) | 260, 646, 1350, 2334, 2354, 3292, 4228, 5196, 5677 |
| MaeII | ACGT | 7 cut(s) | 371, 2100, 3812, 4108, 4423, 4930, 5103 |
| MfeI | CAATTG | 6 cut(s) | 957, 2673, 3432, 3837, 4078, 5730 |
| MflI | RGATCY | 6 cut(s) | 1275, 1522, 4006, 4682, 4910, 5439 |
| MmeI | TCCRAC | 8 cut(s) | 1098, 1208, 1590, 1750, 1819, 4069, 4138, 5154 |
| Mph1103I | ATGCAT | 3 cut(s) | 1478, 2646, 6093 |
| MroI | TCCGGA | 2 cut(s) | 3160, 3760 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1362, 2013, 4305, 5001, 5739 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1367, 2891, 3210, 3320, 3804, 4126, 5597 |
| MspA1I | CMGCKG | 3 cut(s) | 1643, 5746, 6141 |
| MspCI | CTTAAG | 8 cut(s) | 2867, 2903, 3035, 3115, 3365, 3848, 5149, 5573 |
| MunI | CAATTG | 6 cut(s) | 957, 2673, 3432, 3837, 4078, 5730 |
| Mva1269I | GAATGC | 4 cut(s) | 740, 1478, 3315, 4360 |
| MvnI | CGCG | 2 cut(s) | 24, 171 |
| NciI | CCSGG | 3 cut(s) | 425, 941, 3136 |
| NdeI | CATATG | 2 cut(s) | 1672, 3321 |
| NheI | GCTAGC | 1 cut(s) | 1180 |
| NlaIV | GGNNCC | 9 cut(s) | 945, 951, 1035, 1503, 2330, 4988, 5380, 6036, 6130 |
| NmeAIII | GCCGAG | 3 cut(s) | 1018, 1711, 3714 |
| NmuCI | GTSAC | 5 cut(s) | 120, 805, 3046, 3646, 5417 |
| NsiI | ATGCAT | 3 cut(s) | 1478, 2646, 6093 |
| NspI | RCATGY | 6 cut(s) | 724, 2065, 2505, 3100, 4818, 5347 |
| NspV | TTCGAA | 1 cut(s) | 2033 |
| PaeI | GCATGC | 1 cut(s) | 724 |
| PagI | TCATGA | 1 cut(s) | 5257 |
| PasI | CCCWGGG | 1 cut(s) | 284 |
| PciSI | GCTCTTC | 2 cut(s) | 1335, 3597 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4105 |
| PctI | GAATGC | 4 cut(s) | 740, 1478, 3315, 4360 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1362, 2013, 4305, 5001, 5739 |
| PflFI | GACNNNGTC | 1 cut(s) | 3908 |
| PfoI | TCCNGGA | 3 cut(s) | 2091, 2418, 5088 |
| PinAI | ACCGGT | 1 cut(s) | 863 |
| PmaCI | CACGTG | 1 cut(s) | 372 |
| PmlI | CACGTG | 1 cut(s) | 372 |
| Ppu21I | YACGTR | 2 cut(s) | 372, 4424 |
| PpuMI | RGGWCCY | 1 cut(s) | 6129 |
| PshAI | GACNNNNGTC | 1 cut(s) | 910 |
| PsiI | TTATAA | 1 cut(s) | 2174 |
| Psp124BI | GAGCTC | 3 cut(s) | 1303, 1347, 2602 |
| Psp1406I | AACGTT | 1 cut(s) | 5103 |
| Psp5II | RGGWCCY | 1 cut(s) | 6129 |
| PspCI | CACGTG | 1 cut(s) | 372 |
| PspFI | CCCAGC | 4 cut(s) | 82, 1163, 1656, 2635 |
| PspN4I | GGNNCC | 9 cut(s) | 945, 951, 1035, 1503, 2330, 4988, 5380, 6036, 6130 |
| PspOMI | GGGCCC | 1 cut(s) | 4986 |
| PspPI | GGNCC | 6 cut(s) | 1259, 1459, 2693, 4986, 4987, 6129 |
| PspPPI | RGGWCCY | 1 cut(s) | 6129 |
| PstI | CTGCAG | 2 cut(s) | 3884, 5567 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1372, 5805 |
| PsuI | RGATCY | 6 cut(s) | 1275, 1522, 4006, 4682, 4910, 5439 |
| PsyI | GACNNNGTC | 1 cut(s) | 3908 |
| PvuII | CAGCTG | 1 cut(s) | 6141 |
| RsaI | GTAC | 5 cut(s) | 4017, 4422, 4616, 4955, 5494 |
| RsaNI | GTAC | 5 cut(s) | 4016, 4421, 4615, 4954, 5493 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1367, 2891, 3210, 3320, 3804, 4126, 5597 |
| SacI | GAGCTC | 3 cut(s) | 1303, 1347, 2602 |
| SapI | GCTCTTC | 2 cut(s) | 1335, 3597 |
| Sau96I | GGNCC | 6 cut(s) | 1259, 1459, 2693, 4986, 4987, 6129 |
| SfcI | CTRYAG | 5 cut(s) | 529, 3880, 4882, 5563, 5806 |
| SfuI | TTCGAA | 1 cut(s) | 2033 |
| SgrAI | CRCCGGYG | 1 cut(s) | 863 |
| SinI | GGWCC | 3 cut(s) | 1459, 2693, 6129 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1367, 2891, 3210, 3320, 3804, 4126, 5597 |
| SnaBI | TACGTA | 1 cut(s) | 4424 |
| SpeI | ACTAGT | 1 cut(s) | 5227 |
| SphI | GCATGC | 1 cut(s) | 724 |
| SspI | AATATT | 1 cut(s) | 4463 |
| SstI | GAGCTC | 3 cut(s) | 1303, 1347, 2602 |
| StyI | CCWWGG | 1 cut(s) | 4725 |
| TaaI | ACNGT | 9 cut(s) | 310, 824, 1837, 2144, 2277, 4156, 4241, 4744, 5423 |
| TaiI | ACGT | 7 cut(s) | 374, 2103, 3815, 4111, 4426, 4933, 5106 |
| TatI | WGTACW | 2 cut(s) | 4015, 5492 |
| TauI | GCSGC | 7 cut(s) | 32, 44, 101, 1224, 1643, 2886, 5749 |
| TscAI | CASTG | 7 cut(s) | 313, 565, 1342, 1840, 4244, 5426, 5908 |
| TseFI | GTSAC | 5 cut(s) | 120, 805, 3046, 3646, 5417 |
| Tsp45I | GTSAC | 5 cut(s) | 120, 805, 3046, 3646, 5417 |
| TspGWI | ACGGA | 4 cut(s) | 1526, 2669, 4953, 5509 |
| TspRI | CASTG | 7 cut(s) | 313, 565, 1342, 1840, 4244, 5426, 5908 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3908 |
| Vha464I | CTTAAG | 8 cut(s) | 2867, 2903, 3035, 3115, 3365, 3848, 5149, 5573 |
| VneI | GTGCAC | 2 cut(s) | 867, 5510 |
| VpaK11BI | GGWCC | 3 cut(s) | 1459, 2693, 6129 |
| XbaI | TCTAGA | 3 cut(s) | 2491, 2989, 5554 |
| XceI | RCATGY | 6 cut(s) | 724, 2065, 2505, 3100, 4818, 5347 |
| XmiI | GTMKAC | 2 cut(s) | 770, 6012 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1362, 2013, 4305, 5001, 5739 |
| Zsp2I | ATGCAT | 3 cut(s) | 1478, 2646, 6093 |