Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0010532

Physical Location & Seq

Genomic Coordinates Forward (+)

50369218 .. 50372473

Gene Structure 3256 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0393100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGTGCAAGGGTTCTAAGAGTAGAGTTATCTCCTCAAATTTCATCATGGAAAATGAATTTCAGAATCAGAACGGTGGCAGCCTGTATAAGTCATCGGTTTTGGTTGAGTTGTCTGCCTCGGACAATCTCGATGCTTTCAGGAGTGAAGTAGAAGAGAAAGGTTTCCATGTTGATGAGGCCAGCTTTTGGTATGGAAGAAGAATTGGGTCAAAGAAGATGGGGTTCGAAGAGAGGACACCGCTTATGATCGCTGCCATGTTTGGTAGCACCAAGGTTTTGAAGTATATAATTGACTCTGGCAAGGTTGATGTCAATAGGTCCTGTGGTTCTGATAGAGTTACTGCCCTTCACTGTGCCACTGCTGGCGGTTCCTCTTCTTCGCTTGAGGTTGTCAAGCTCTTGCTTGATGCATCTGCTGATGCTAATTGTGTCACCGCTAATGGAAACAAGCCTGTTGACTTGATTGCCCCCGCTTTGAAGTCACCTTGCAACTCAAGAAGAAAGGCCATGGAGATGTTGTTGAAGGGCGATATGTCACTTTTGGGAAGTGATATTGATGATCAAGAGGTTCCAAGCCTTCAGTTGTTGAAAGAGGGAAGCGAGAAGAAAGAATATCCTATTGATATTGCATTGCCAGATATCAACAATGGGATTTATGGTTCAGATGAGTTCAGAATGTACACTTTCAAGGTGAAGCCGTGCTCCAGGGCCTACTCTCATGACTGGACCGAGTGCCCTTTTGTTCACCCCGGTGAGAATGCAAGGAGGAGAGACCCAAGGAAGTATCCATACAGCTGTGTCCCCTGCCCTGAGTTCCGCAAAGGCTCATGCCAGAAGGGAGATGTCTGTGAATATGCTCATGGTGTTTTCGAGTCCTGGCTTCATCCTGCTCAATACCGCACTCGCCTTTGCAAGGACGAAACTGGATGCACAAGGAAGGTGTGCTTCTTTGCTCACAAACCTGAAGAGTTGCGCCCAGTGTATGCTTCCACGGGTTCAGCCATGCCTTCACCTAGGTCTATGTCAGCCAGCGCTGGAGATATGACAACCATGAGCCCATTAGCTCTTGGTTCACCATCTCTGTCTATGCCTACCGCATCAACACCACCCATGTCTCCAATTGCAGCCTCTTCTCCTAAGAATGGAGGTCTGTGGCAGAACAAGGTTAACCTCACCCCACCTGCCTTGCAGCTTCCAGGTAGCAGGCTAAAGAGTGCTTCAAGCGCTCGTGATTTGGACTTGGAGATGGAATTTCTAGGGCGTGATAATCACCACGCTAACCAACAACAACAGCATATGTGGGATGAGATGTCTCGTCTCTCCTCTCCATCCTGCTATAATAACAGCAGGATTGGAGAATTGAAGCCAACTAACCTTGACGACCTTTTTGGATCATTTGATCCTTCTTTATTGTCCCAATTGCAGGCACTCTCAACACAAACCCAGTTACAATCTTCACCTGGGCTTCAGAGTCGCCAAAACATGAACCAACTCCGTTCAAGTTACCCATCCAACTTGTCATCCTCTCCTGTGAGGAAGCCCTCGTCATTCGGGCTTGACTCACCTGCAGCATTGGCAGCAGCAGTTATGAATTCAAGGTCTGCTGCCTTTGCAAAGCGGAGCCATAGTTTCATTGACCGTGGAGCAGTAACCCATCATCCAGGGTTTACATCGGCTGCTAACTCAAACACCATGATGTCGTCTTCGGATTGGAACTCACCTAGTGGGAAATTGGATTGGGGAATTCAAGGAGATGATCTGAACAAGCTGAGGAAGTCTGCTTCTTTTGGGTTCAGAAGCAACAATGCTGGAACACCAAACAACATGATGCCATCAGCTCTTGACGAGCCAGATGTGTCTTGGGTCAATTCTCTGGTGAAAGATGTTTCTTCCGAGAGGTCCGAGATGTTTGGTGCAGAGAGGCAGAACTATCGTCAGTTGAACAAGGGGGTTCATGAAATGCTTCCGTCATGGGCGGAGCAGATGTATATAGAACAGGAGCAGAGGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_3 NB-ARC TIR

Protein Analysis

670

Amino Acids

73.65

Weight (kDa)

7.52

Isoelectric Point (pI)

57.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	76 - 142	3.4e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	82 - 128	2.8e-06	Ankyrin repeats (many copies)
zf-CCCH_AtC3H23	PF25512	223 - 256	9e-21	AtC3H23-like, CCCH zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010532)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620 FvH4_2g38620
rosa_chinensis	RchiOBHm_Chr1g0375971
rosa_laevigata	RLG00000026639
rosa_multiflora	Rmu_sc0024503.1_g000001 Rmu_ssc0000116.1_g000001 Rmu_ssc0000116.1_g000009
rosa_roxburghii	Rroxscaffold_4G00282460
rosa_rugosa	Rorug01G0393100 Rorug01G0393200 Rorug02G0306500 Rorug02G0306600
rosa_wichuraiana	Rw0G010340 Rw1G035880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1189, 1573
Acc36I	ACCTGC	2 cut(s)	1189, 1573
AccB7I	CCANNNNNTGG	1 cut(s)	186
AciI	CCGC	9 cut(s)	239, 366, 435, 471, 817, 898, 1095, 1618, 1976
AclWI	GGATC	2 cut(s)	1394, 1399
AcsI	RAATTY	5 cut(s)	37, 56, 1250, 1591, 1743
AcuI	CTGAAG	3 cut(s)	563, 984, 1451
AdeI	CACNNNGTG	1 cut(s)	1724
AfaI	GTAC	1 cut(s)	680
AfeI	AGCGCT	2 cut(s)	1033, 1225
AfiI	CCNNNNNNNGG	4 cut(s)	186, 913, 1142, 1423
AjnI	CCWGG	5 cut(s)	704, 875, 1195, 1459, 1660
AleI	CACNNNNGTG	1 cut(s)	750
AloI	GAACNNNNNNTCC	2 cut(s)	643, 675
AluBI	AGCT	7 cut(s)	183, 397, 795, 1064, 1192, 1768, 1838
AluI	AGCT	7 cut(s)	183, 397, 795, 1064, 1192, 1768, 1838
Alw21I	GWGCWC	1 cut(s)	704
Alw26I	GTCTC	4 cut(s)	765, 1119, 1317, 1322
AlwI	GGATC	2 cut(s)	1394, 1399
Aor51HI	AGCGCT	2 cut(s)	1033, 1225
AoxI	GGCC	3 cut(s)	177, 504, 708
ApeKI	GCWGC	9 cut(s)	78, 251, 1124, 1189, 1568, 1577, 1580, 1604, 1676
ApoI	RAATTY	5 cut(s)	37, 56, 1250, 1591, 1743
ArsI	GACNNNNNNTTYG	2 cut(s)	1370, 1402
Asp700I	GAANNNNTTC	2 cut(s)	161, 1962
AspA2I	CCTAGG	1 cut(s)	1013
AspLEI	GCGC	3 cut(s)	975, 1034, 1226
AspS9I	GGNCC	4 cut(s)	318, 708, 726, 1899
AsuC2I	CCSGG	1 cut(s)	750
AsuII	TTCGAA	1 cut(s)	225
AvaII	GGWCC	3 cut(s)	318, 726, 1899
AvrII	CCTAGG	1 cut(s)	1013
BaeGI	GKGCMC	1 cut(s)	737
BanII	GRGCYC	1 cut(s)	1058
BarI	GAAGNNNNNNTAC	2 cut(s)	773, 805
BauI	CACGAG	1 cut(s)	1227
BbsI	GAAGAC	1 cut(s)	1695
Bbv12I	GWGCWC	1 cut(s)	704
BbvCI	CCTCAGC	1 cut(s)	1769
BbvI	GCAGC	9 cut(s)	90, 238, 1136, 1201, 1580, 1589, 1591, 1592, 1663
BccI	CCATC	7 cut(s)	211, 1084, 1240, 1336, 1516, 1662, 1840
BceAI	ACGGC	1 cut(s)	682
BcgI	CGANNNNNNTGC	2 cut(s)	1913, 1947
BciT130I	CCWGG	5 cut(s)	706, 877, 1197, 1461, 1662
BciVI	GTATCC	1 cut(s)	795
BclI	TGATCA	1 cut(s)	559
BcnI	CCSGG	1 cut(s)	750
BcoDI	GTCTC	4 cut(s)	765, 1119, 1317, 1322
BfaI	CTAG	3 cut(s)	1014, 1256, 1722
BfmI	CTRYAG	1 cut(s)	1566
BfoI	RGCGCY	2 cut(s)	1035, 1227
BfuAI	ACCTGC	2 cut(s)	1189, 1573
BfuI	GTATCC	1 cut(s)	795
BisI	GCNGC	9 cut(s)	79, 252, 1125, 1190, 1569, 1578, 1581, 1605, 1677
BlnI	CCTAGG	1 cut(s)	1013
BlsI	GCNGC	9 cut(s)	80, 253, 1126, 1191, 1570, 1579, 1582, 1606, 1678
Bme1390I	CCNGG	6 cut(s)	706, 750, 877, 1197, 1461, 1662
Bme18I	GGWCC	3 cut(s)	318, 726, 1899
BmgT120I	GGNCC	4 cut(s)	318, 708, 726, 1899
BmiI	GGNNCC	3 cut(s)	370, 570, 1622
BmrFI	CCNGG	6 cut(s)	706, 750, 877, 1197, 1461, 1662
BmrI	ACTGGG	2 cut(s)	971, 1438
BmsI	GCATC	7 cut(s)	121, 397, 409, 419, 917, 1106, 1818
BmuI	ACTGGG	2 cut(s)	971, 1438
BpiI	GAAGAC	1 cut(s)	1695
BpmI	CTGGAG	2 cut(s)	688, 1056
Bpu10I	CCTNAGC	1 cut(s)	1769
Bpu14I	TTCGAA	1 cut(s)	225
BpuEI	CTTGAG	2 cut(s)	404, 478
BpuMI	CCSGG	1 cut(s)	750
BsaI	GGTCTC	1 cut(s)	765
BsaXI	ACNNNNNCTCC	6 cut(s)	503, 533, 1612, 1642, 1970, 2000
Bsc4I	CCNNNNNNNGG	4 cut(s)	186, 913, 1142, 1423
Bse1I	ACTGG	4 cut(s)	728, 928, 977, 1444
Bse3DI	GCAATG	1 cut(s)	629
BseBI	CCWGG	5 cut(s)	706, 877, 1197, 1461, 1662
BseGI	GGATG	7 cut(s)	883, 932, 1309, 1328, 1508, 1520, 1657
BseLI	CCNNNNNNNGG	4 cut(s)	186, 913, 1142, 1423
BseMI	GCAATG	1 cut(s)	629
BseMII	CTCAG	2 cut(s)	801, 1760
BseNI	ACTGG	4 cut(s)	728, 928, 977, 1444
BseRI	GAGGAG	3 cut(s)	22, 781, 1312
BseSI	GKGCMC	1 cut(s)	737
BseXI	GCAGC	9 cut(s)	90, 238, 1136, 1201, 1580, 1589, 1591, 1592, 1663
BsgI	GTGCAG	1 cut(s)	1935
BshFI	GGCC	3 cut(s)	179, 506, 710
BsiHKAI	GWGCWC	1 cut(s)	704
BsiSI	CCGG	1 cut(s)	750
BslFI	GGGAC	2 cut(s)	785, 1399
BslI	CCNNNNNNNGG	4 cut(s)	186, 913, 1142, 1423
BsmAI	GTCTC	4 cut(s)	765, 1119, 1317, 1322
BsmBI	CGTCTC	1 cut(s)	1322
BsmFI	GGGAC	2 cut(s)	785, 1399
BsmI	GAATGC	1 cut(s)	763
BsnI	GGCC	3 cut(s)	179, 506, 710
Bso31I	GGTCTC	1 cut(s)	765
Bsp119I	TTCGAA	1 cut(s)	225
Bsp1286I	GDGCHC	3 cut(s)	704, 737, 1058
Bsp1407I	TGTACA	1 cut(s)	678
Bsp143I	GATC	5 cut(s)	246, 559, 1391, 1399, 1756
Bsp19I	CCATGG	1 cut(s)	507
BspACI	CCGC	9 cut(s)	239, 366, 435, 471, 817, 898, 1095, 1618, 1976
BspANI	GGCC	3 cut(s)	179, 506, 710
BspCNI	CTCAG	2 cut(s)	802, 1761
BspHI	TCATGA	2 cut(s)	718, 1954
BspLI	GGNNCC	3 cut(s)	370, 570, 1622
BspMAI	CTGCAG	1 cut(s)	1570
BspMI	ACCTGC	2 cut(s)	1189, 1573
BspPI	GGATC	2 cut(s)	1394, 1399
BspT104I	TTCGAA	1 cut(s)	225
BspTNI	GGTCTC	1 cut(s)	765
BsrDI	GCAATG	1 cut(s)	629
BsrGI	TGTACA	1 cut(s)	678
BsrI	ACTGG	4 cut(s)	728, 928, 977, 1444
BssMI	GATC	5 cut(s)	246, 559, 1391, 1399, 1756
BssSI	CACGAG	1 cut(s)	1227
BssT1I	CCWWGG	4 cut(s)	270, 507, 776, 1013
Bst2BI	CACGAG	1 cut(s)	1227
Bst2UI	CCWGG	5 cut(s)	706, 877, 1197, 1461, 1662
Bst4CI	ACNGT	3 cut(s)	74, 353, 1640
Bst6I	CTCTTC	5 cut(s)	147, 222, 379, 960, 1135
BstAUI	TGTACA	1 cut(s)	678
BstBI	TTCGAA	1 cut(s)	225
BstC8I	GCNNGC	5 cut(s)	181, 364, 1030, 1205, 1425
BstDEI	CTNAG	4 cut(s)	15, 810, 1137, 1769
BstDSI	CCRYGG	3 cut(s)	507, 990, 1639
BstENI	CCTNNNNNAGG	1 cut(s)	911
BstF5I	GGATG	7 cut(s)	883, 932, 1309, 1328, 1508, 1520, 1657
BstH2I	RGCGCY	2 cut(s)	1035, 1227
BstHHI	GCGC	3 cut(s)	975, 1034, 1226
BstKTI	GATC	5 cut(s)	249, 562, 1394, 1402, 1759
BstMAI	GTCTC	4 cut(s)	765, 1119, 1317, 1322
BstMBI	GATC	5 cut(s)	246, 559, 1391, 1399, 1756
BstMWI	GCNNNNNNNGC	4 cut(s)	1223, 1574, 1577, 1610
BstNI	CCWGG	5 cut(s)	706, 877, 1197, 1461, 1662
BstSCI	CCNGG	6 cut(s)	704, 748, 875, 1195, 1459, 1660
BstSFI	CTRYAG	1 cut(s)	1566
BstSLI	GKGCMC	1 cut(s)	737
BstV1I	GCAGC	9 cut(s)	90, 238, 1136, 1201, 1580, 1589, 1591, 1592, 1663
BstV2I	GAAGAC	1 cut(s)	1695
BsuI	GTATCC	1 cut(s)	795
BsuRI	GGCC	3 cut(s)	179, 506, 710
BtgI	CCRYGG	3 cut(s)	507, 990, 1639
BtsCI	GGATG	7 cut(s)	883, 932, 1309, 1328, 1508, 1520, 1657
BtsI	GCAGTG	1 cut(s)	357
BtsIMutI	CAGTG	3 cut(s)	349, 357, 984
BveI	ACCTGC	2 cut(s)	1189, 1573
Cac8I	GCNNGC	5 cut(s)	181, 364, 1030, 1205, 1425
CciI	TCATGA	2 cut(s)	718, 1954
CfoI	GCGC	3 cut(s)	975, 1034, 1226
Cfr13I	GGNCC	4 cut(s)	318, 708, 726, 1899
Csp6I	GTAC	1 cut(s)	679
CspCI	CAANNNNNGTGG	2 cut(s)	1167, 1202
CviQI	GTAC	1 cut(s)	679
DdeI	CTNAG	4 cut(s)	15, 810, 1137, 1769
DpnI	GATC	5 cut(s)	248, 561, 1393, 1401, 1758
DpnII	GATC	5 cut(s)	246, 559, 1391, 1399, 1756
DraIII	CACNNNGTG	1 cut(s)	1724
Eam1104I	CTCTTC	5 cut(s)	147, 222, 379, 960, 1135
EarI	CTCTTC	5 cut(s)	147, 222, 379, 960, 1135
EciI	GGCGGA	1 cut(s)	1991
Eco130I	CCWWGG	4 cut(s)	270, 507, 776, 1013
Eco24I	GRGCYC	1 cut(s)	1058
Eco31I	GGTCTC	1 cut(s)	765
Eco32I	GATATC	1 cut(s)	640
Eco47I	GGWCC	3 cut(s)	318, 726, 1899
Eco47III	AGCGCT	2 cut(s)	1033, 1225
Eco57I	CTGAAG	3 cut(s)	563, 984, 1451
EcoNI	CCTNNNNNAGG	1 cut(s)	911
EcoO109I	RGGNCCY	2 cut(s)	318, 708
EcoRI	GAATTC	2 cut(s)	1591, 1743
EcoRII	CCWGG	5 cut(s)	704, 875, 1195, 1459, 1660
EcoRV	GATATC	1 cut(s)	640
EcoT14I	CCWWGG	4 cut(s)	270, 507, 776, 1013
EcoT22I	ATGCAT	1 cut(s)	412
EcoT38I	GRGCYC	1 cut(s)	1058
ErhI	CCWWGG	4 cut(s)	270, 507, 776, 1013
Esp3I	CGTCTC	1 cut(s)	1322
FalI	AAGNNNNNCTT	2 cut(s)	929, 961
FaqI	GGGAC	2 cut(s)	785, 1399
FauI	CCCGC	1 cut(s)	478
FauNDI	CATATG	1 cut(s)	1296
FbaI	TGATCA	1 cut(s)	559
Fnu4HI	GCNGC	9 cut(s)	79, 252, 1125, 1190, 1569, 1578, 1581, 1605, 1677
FokI	GGATG	7 cut(s)	870, 939, 1315, 1316, 1495, 1507, 1644
FriOI	GRGCYC	1 cut(s)	1058
Fsp4HI	GCNGC	9 cut(s)	79, 252, 1125, 1190, 1569, 1578, 1581, 1605, 1677
FspBI	CTAG	3 cut(s)	1014, 1256, 1722
GlaI	GCGC	3 cut(s)	974, 1033, 1225
GluI	GCNGC	9 cut(s)	79, 252, 1125, 1190, 1569, 1578, 1581, 1605, 1677
GsuI	CTGGAG	2 cut(s)	688, 1056
HaeII	RGCGCY	2 cut(s)	1035, 1227
HaeIII	GGCC	3 cut(s)	179, 506, 710
HapII	CCGG	1 cut(s)	750
HhaI	GCGC	3 cut(s)	975, 1034, 1226
Hin6I	GCGC	3 cut(s)	973, 1032, 1224
HinP1I	GCGC	3 cut(s)	973, 1032, 1224
HincII	GTYRAC	2 cut(s)	457, 1168
HindII	GTYRAC	2 cut(s)	457, 1168
HinfI	GANTC	5 cut(s)	64, 293, 872, 1471, 1559
HpaI	GTTAAC	1 cut(s)	1168
HpaII	CCGG	1 cut(s)	750
Hpy166II	GTNNAC	6 cut(s)	457, 681, 745, 1073, 1168, 1668
Hpy188III	TCNNGA	8 cut(s)	128, 139, 495, 563, 719, 1229, 1841, 1955
Hpy8I	GTNNAC	6 cut(s)	457, 681, 745, 1073, 1168, 1668
HpyAV	CCTTC	7 cut(s)	356, 517, 587, 829, 931, 1017, 1413
HpyCH4III	ACNGT	3 cut(s)	74, 353, 1640
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1223, 1574, 1577, 1610
HpyF3I	CTNAG	4 cut(s)	15, 810, 1137, 1769
HspAI	GCGC	3 cut(s)	973, 1032, 1224
Ksp22I	TGATCA	1 cut(s)	559
KspAI	GTTAAC	1 cut(s)	1168
Kzo9I	GATC	5 cut(s)	246, 559, 1391, 1399, 1756
LmnI	GCTCC	5 cut(s)	707, 1620, 1643, 1978, 1999
Lsp1109I	GCAGC	9 cut(s)	90, 238, 1136, 1201, 1580, 1589, 1591, 1592, 1663
LweI	GCATC	7 cut(s)	121, 397, 409, 419, 917, 1106, 1818
MaeI	CTAG	3 cut(s)	1014, 1256, 1722
MaeIII	GTNAC	7 cut(s)	337, 430, 480, 534, 1446, 1502, 1648
MalI	GATC	5 cut(s)	248, 561, 1393, 1401, 1758
MboI	GATC	5 cut(s)	246, 559, 1391, 1399, 1756
MfeI	CAATTG	2 cut(s)	1119, 1418
MhlI	GDGCHC	3 cut(s)	704, 737, 1058
MlyI	GAGTC	4 cut(s)	287, 881, 1480, 1553
MmeI	TCCRAC	1 cut(s)	1536
Mph1103I	ATGCAT	1 cut(s)	412
MroXI	GAANNNNTTC	2 cut(s)	161, 1962
MseI	TTAA	1 cut(s)	1167
MslI	CAYNNNNRTG	4 cut(s)	171, 512, 750, 1694
MspA1I	CMGCKG	1 cut(s)	795
MspI	CCGG	1 cut(s)	750
MspR9I	CCNGG	6 cut(s)	706, 750, 877, 1197, 1461, 1662
MunI	CAATTG	2 cut(s)	1119, 1418
Mva1269I	GAATGC	1 cut(s)	763
MvaI	CCWGG	5 cut(s)	706, 877, 1197, 1461, 1662
MwoI	GCNNNNNNNGC	4 cut(s)	1223, 1574, 1577, 1610
NciI	CCSGG	1 cut(s)	750
NcoI	CCATGG	1 cut(s)	507
NdeI	CATATG	1 cut(s)	1296
NdeII	GATC	5 cut(s)	246, 559, 1391, 1399, 1756
NlaIV	GGNNCC	3 cut(s)	370, 570, 1622
NmuCI	GTSAC	3 cut(s)	430, 480, 534
NsiI	ATGCAT	1 cut(s)	412
NspV	TTCGAA	1 cut(s)	225
OliI	CACNNNNGTG	1 cut(s)	750
PagI	TCATGA	2 cut(s)	718, 1954
PaqCI	CACCTGC	2 cut(s)	1189, 1573
PctI	GAATGC	1 cut(s)	763
PdmI	GAANNNNTTC	2 cut(s)	161, 1962
PfeI	GAWTC	1 cut(s)	64
PflMI	CCANNNNNTGG	1 cut(s)	186
PkrI	GCNGC	9 cut(s)	80, 253, 1126, 1191, 1570, 1579, 1582, 1606, 1678
PleI	GAGTC	4 cut(s)	287, 880, 1479, 1553
PpsI	GAGTC	4 cut(s)	287, 880, 1479, 1553
PpuMI	RGGWCCY	1 cut(s)	318
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	5 cut(s)	704, 875, 1195, 1459, 1660
PspGI	CCWGG	5 cut(s)	704, 875, 1195, 1459, 1660
PspN4I	GGNNCC	3 cut(s)	370, 570, 1622
PspPI	GGNCC	4 cut(s)	318, 708, 726, 1899
PspPPI	RGGWCCY	1 cut(s)	318
PstI	CTGCAG	1 cut(s)	1570
PvuII	CAGCTG	1 cut(s)	795
RsaI	GTAC	1 cut(s)	680
RsaNI	GTAC	1 cut(s)	679
RseI	CAYNNNNRTG	4 cut(s)	171, 512, 750, 1694
SaqAI	TTAA	1 cut(s)	1167
SatI	GCNGC	9 cut(s)	79, 252, 1125, 1190, 1569, 1578, 1581, 1605, 1677
Sau3AI	GATC	5 cut(s)	246, 559, 1391, 1399, 1756
Sau96I	GGNCC	4 cut(s)	318, 708, 726, 1899
SchI	GAGTC	4 cut(s)	287, 881, 1480, 1553
ScrFI	CCNGG	6 cut(s)	706, 750, 877, 1197, 1461, 1662
SduI	GDGCHC	3 cut(s)	704, 737, 1058
SfaNI	GCATC	7 cut(s)	121, 397, 409, 419, 917, 1106, 1818
SfcI	CTRYAG	1 cut(s)	1566
SfuI	TTCGAA	1 cut(s)	225
SinI	GGWCC	3 cut(s)	318, 726, 1899
SmiMI	CAYNNNNRTG	4 cut(s)	171, 512, 750, 1694
SmlI	CTYRAG	2 cut(s)	383, 493
SmoI	CTYRAG	2 cut(s)	383, 493
SsiI	CCGC	9 cut(s)	239, 366, 435, 471, 817, 898, 1095, 1618, 1976
SspMI	CTAG	3 cut(s)	1014, 1256, 1722
StyD4I	CCNGG	6 cut(s)	704, 748, 875, 1195, 1459, 1660
StyI	CCWWGG	4 cut(s)	270, 507, 776, 1013
TaaI	ACNGT	3 cut(s)	74, 353, 1640
TaqI	TCGA	3 cut(s)	129, 225, 870
TaqII	GACCGA	1 cut(s)	743
TatI	WGTACW	1 cut(s)	678
TfiI	GAWTC	1 cut(s)	64
Tru1I	TTAA	1 cut(s)	1167
Tru9I	TTAA	1 cut(s)	1167
TscAI	CASTG	3 cut(s)	356, 364, 984
TseFI	GTSAC	3 cut(s)	430, 480, 534
TseI	GCWGC	9 cut(s)	78, 251, 1124, 1189, 1568, 1577, 1580, 1604, 1676
Tsp45I	GTSAC	3 cut(s)	430, 480, 534
TspDTI	ATGAA	8 cut(s)	31, 69, 872, 1499, 1604, 1621, 1943, 1971
TspGWI	ACGGA	2 cut(s)	1484, 1956
TspRI	CASTG	3 cut(s)	356, 364, 984
Van91I	CCANNNNNTGG	1 cut(s)	186
VpaK11BI	GGWCC	3 cut(s)	318, 726, 1899
XagI	CCTNNNNNAGG	1 cut(s)	911
XapI	RAATTY	5 cut(s)	37, 56, 1250, 1591, 1743
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1857
XmaJI	CCTAGG	1 cut(s)	1013
XmnI	GAANNNNTTC	2 cut(s)	161, 1962
XspI	CTAG	3 cut(s)	1014, 1256, 1722
Zsp2I	ATGCAT	1 cut(s)	412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.