Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0025040.1

Orthogroup ID

OG0004069

Physical Location & Seq

Genomic Coordinates Forward (+)

27781 .. 34695

Gene Structure 6915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0025040.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2783 bp

atgcatcacgctccggcgacggtcgaggaacagttgctgctgaaagcaatcaaggaagaatgcccctgggagagtctaccgaaacggctccaagcgacgttgtcttcgaaagaagaatggcacagatgggtgattgagcattgcataaagaaaagactgcaatggagcagttgctttgctcgaaaaatgtgcaaggaaagtgaatattatgaagacatgatgcggtacttgcgaaggaatctagcgctgtttccctatcaccttgcagagtatgtttgtcgtgtaatgagggtatcacctttccgatactactgcgatatgattttcgaagttatgaaaaatgagcaaccgtatgatagcatccccaattttagtgctgcagatgccttgagactgacagggatcggaagaaatgaatttattgatataatgaacaagtgcagatctaagaaaattatgtggaagctgaacaagtcaattgcaaaggaacttttacctacacaacctgtggattttgctattgaaccgtggtggggaatttgtctagtgaattttacactggaagaatttaagaaactttcagaggaagaaatggctacgatagataaagtatgtaaagaggaagcaaattcttatatcctattcgatcctgatattattaagggtcttcatcaacgaggattaatatactttgatgttcctgtgtatcccgatgatcgttttaaagtttccaggcttgaaggatttgtttccaacagagagcaatcttatgaagatcctatagaggagatactatatgcagtatttgttgtttcaagtgagaatgcaactgtcgctgagctggcatcaacattacaggctgaccttgcacagctgcaggctgctgcatcttttgcatgtcgattgggatgggccgtaaaagtatttgacccagcatctgttcttcaagatgcaggtttaccaggatctcctagaaacagtcttagtgatgaagatccatctcatcgtagtacgggctcaaggaatatgtttgctgatggtgatgctactatacaaggtgatgcttcagggagagaaaactatgggccagtttcttcgcaggatcgtgttgcatttgttgttgatgctaacataacatcttatcttatgatggggtctgtttcaccaggtctgaaatctcatgctgtgacgctatacgaagcgggaaagttgggtcatgctagcattacagatctttgcaaggatcttagtacgctagagggcaccaaatttgaaggagaactgcaggaatttgcaaatcatgcatttagcctccgttgtgttttggaatgccttcaatcaggaggagttgcaactgatgtgaaagctgatgaagtttgcaatatgaaggatatgataaatttcaatgatgatgaggctgcgatcatacctaacatccctctgactaaccaatcaggagaccttagtacgcatgaagacgcaattgatgctgatggttctaagaaatcagggatgccccaggacagttccgttttggtcgaacatgttaataatattacaagtgaggaagtaatgattggtacttcatcagaagatacaacttgcttaaatgaagtctctaaatcagattctaatcttcaaagttgtgagaaactgatgcctgatgaaggttcagatgttggaggagaactgtttaagaggaaaaagaaattccgagtggatatccttcgctgtgaaagcttggcgtcccttgcaccagccactttagatcggttgcttcgtcgtgactatgatattgttgtgtctatggttcctcttccgccgtcgtcagtacttcctggacctacaggtcctattaattttggtcctccctcttattcatcaatgactccttggatgaaaatagtattgtactcaactttgggctgtggacctctatcggttattctgatgaagggacaatgcttacgcttacttcctgcaccactagctggttgtgaaaaagcccttttatggtcttgggatggttctacagttggagggttgggaggcaagtttgaaggaaatctagtaaagggaaatatacttctacattgcttaaattcaattcttaaattctctgctgtactagtgcagcccctcagtaggtatgacctcgatgaatcaggaaaaattgttactatggatattccattaccgctgaagaactctgatggttcaattgaatgtatggggaaggaattgggactgtctgaaaaggaagcttcagaactggattctatgttgactgctttggcaaacaagatagaattgtggacagttggctatattcgcgtattgaaacttttcagagaaagagattcagaccactttgcacctgatgatgagaagtatgaatgggtcccgttaagtgtggaatttgggatgccactatttaatccaaaattgtgcaataatatttgcaaaagagtggtatcatcacaattacttcaaaatgatttatttaccaagcatcatgatgcaatgcaaggcttacggaaaatgttacgtgatgtttgtacagagtaccaagcaacaggtgctgccgcaaaacttctttaccagaaagagcaaccaaaggacttctcacggcatctcatgaattatgcgagcggaaggtggaatcctcttatagacccttcttctccgatttcaggagcctcgagtgatcatcagagactaaaactagttagtcgacatcgttcccgaactgaagttttgagctttgatggaagcattctaag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAM91_C FAM91_N

Protein Analysis

927

Amino Acids

103.57

Weight (kDa)

5.34

Isoelectric Point (pI)

53.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35220 AT1G35220 AT1G35220 AT1G35220 AT1G35220 AT1G35220 AT1G35220
fragaria_vesca	FvH4_5g36450 FvH4_5g36450 FvH4_5g36450 FvH4_5g36450 FvH4_5g36450 FvH4_5g36450 FvH4_5g36450
malus_domestica	MD08G1188800.v1.1 MD15G1376600.v1.1 MD15G1376700.v1.1
prunus_persica	Prupe.1G523400_v2.0.a1
pyrus_communis	pycom08g16250
rosa_chinensis	RchiOBHm_Chr7g0238491
rosa_laevigata	RLG00000000910
rosa_multiflora	Rmu_sc0001536.1_g000012 Rmu_sc0025040.1_g000006
rosa_roxburghii	Rroxscaffold_3G00223010 Rroxscaffold_3G00223110
rosa_rugosa	Rorug07G0312600 Rorug07G0312700 Rorug07G0312800
rosa_samantha	Rh7AG467600 Rh7BG438300 Rh7CG485600 Rh7DG454100
rosa_wichuraiana	Rw7G038830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1848
Acc36I	ACCTGC	1 cut(s)	944
AccB1I	GGYRCC	1 cut(s)	1262
AccB7I	CCANNNNNTGG	1 cut(s)	1991
AccBSI	CCGCTC	1 cut(s)	2652
AccI	GTMKAC	2 cut(s)	76, 2734
AccII	CGCG	1 cut(s)	2334
AciI	CCGC	6 cut(s)	223, 1202, 1820, 2198, 2586, 2652
AclWI	GGATC	7 cut(s)	410, 641, 770, 973, 989, 1110, 1251
AcuI	CTGAAG	4 cut(s)	1050, 2222, 2250, 2772
AcyI	GRCGYC	1 cut(s)	1745
AfeI	AGCGCT	1 cut(s)	246
AfiI	CCNNNNNNNGG	6 cut(s)	533, 1667, 1991, 2013, 2145, 2693
AflIII	ACRYGT	1 cut(s)	1543
AhlI	ACTAGT	2 cut(s)	2128, 2725
AjnI	CCWGG	6 cut(s)	65, 731, 961, 1165, 1518, 1837
AjuI	GAANNNNNNNTTGG	2 cut(s)	1560, 1592
AluBI	AGCT	8 cut(s)	466, 841, 874, 1367, 1740, 1991, 2264, 2763
AluI	AGCT	8 cut(s)	466, 841, 874, 1367, 1740, 1991, 2264, 2763
Alw26I	GTCTC	4 cut(s)	385, 1452, 1621, 2710
AlwI	GGATC	7 cut(s)	410, 641, 770, 973, 989, 1110, 1251
AlwNI	CAGNNNCTG	3 cut(s)	37, 938, 2582
Ama87I	CYCGRG	1 cut(s)	2701
Aor51HI	AGCGCT	1 cut(s)	246
AoxI	GGCC	2 cut(s)	912, 1085
ApeKI	GCWGC	8 cut(s)	37, 377, 874, 881, 884, 1418, 2134, 2582
ArsI	GACNNNNNNTTYG	2 cut(s)	88, 120
AseI	ATTAAT	2 cut(s)	683, 1857
Asp700I	GAANNNNTTC	2 cut(s)	1332, 2345
AspLEI	GCGC	1 cut(s)	247
AspS9I	GGNCC	7 cut(s)	912, 1085, 1841, 1850, 1865, 1931, 2401
AsuHPI	GGTGA	6 cut(s)	142, 251, 288, 1052, 1070, 1155
AsuII	TTCGAA	2 cut(s)	107, 327
AsuNHI	GCTAGC	1 cut(s)	1220
AvaI	CYCGRG	1 cut(s)	2701
AvaII	GGWCC	5 cut(s)	1841, 1850, 1865, 1931, 2401
BaeGI	GKGCMC	1 cut(s)	1265
BanI	GGYRCC	1 cut(s)	1262
BanII	GRGCYC	1 cut(s)	1019
BbsI	GAAGAC	4 cut(s)	96, 219, 659, 1482
BbvI	GCAGC	8 cut(s)	24, 364, 861, 868, 871, 1405, 2146, 2569
BccI	CCATC	9 cut(s)	120, 903, 1006, 1031, 1144, 1487, 2018, 2207, 2762
BceAI	ACGGC	4 cut(s)	101, 899, 1807, 2645
BcgI	CGANNNNNNTGC	4 cut(s)	171, 205, 294, 328
BciT130I	CCWGG	6 cut(s)	67, 733, 963, 1167, 1520, 1839
BciVI	GTATCC	1 cut(s)	717
BclI	TGATCA	1 cut(s)	2707
BcoDI	GTCTC	4 cut(s)	385, 1452, 1621, 2710
BcuI	ACTAGT	2 cut(s)	2128, 2725
BfaI	CTAG	9 cut(s)	242, 545, 972, 1221, 1256, 1988, 2069, 2129, 2726
BfmI	CTRYAG	6 cut(s)	378, 780, 875, 1283, 1845, 2031
BfoI	RGCGCY	1 cut(s)	248
BfuAI	ACCTGC	1 cut(s)	944
BfuI	GTATCC	1 cut(s)	717
BglII	AGATCT	2 cut(s)	443, 1231
BisI	GCNGC	9 cut(s)	38, 378, 875, 882, 885, 1419, 2135, 2583, 2586
BlpI	GCTNAGC	1 cut(s)	837
BlsI	GCNGC	9 cut(s)	39, 379, 876, 883, 886, 1420, 2136, 2584, 2587
BmcAI	AGTACT	1 cut(s)	1833
Bme1390I	CCNGG	6 cut(s)	67, 733, 963, 1167, 1520, 1839
Bme18I	GGWCC	5 cut(s)	1841, 1850, 1865, 1931, 2401
BmeT110I	CYCGRG	1 cut(s)	2701
BmgT120I	GGNCC	7 cut(s)	912, 1085, 1841, 1850, 1865, 1931, 2401
BmiI	GGNNCC	6 cut(s)	89, 1264, 1812, 2402, 2403, 2698
BmrFI	CCNGG	6 cut(s)	67, 733, 963, 1167, 1520, 1839
BmtI	GCTAGC	1 cut(s)	1224
BpiI	GAAGAC	4 cut(s)	96, 219, 659, 1482
Bpu1102I	GCTNAGC	1 cut(s)	837
Bpu14I	TTCGAA	2 cut(s)	107, 327
BpuEI	CTTGAG	2 cut(s)	409, 1003
BsaAI	YACGTR	1 cut(s)	2549
BsaBI	GATNNNNATC	2 cut(s)	993, 1632
BsaHI	GRCGYC	1 cut(s)	1745
BsaI	GGTCTC	1 cut(s)	1452
BsaJI	CCNNGG	5 cut(s)	65, 66, 527, 1518, 1892
Bsc4I	CCNNNNNNNGG	6 cut(s)	533, 1667, 1991, 2013, 2145, 2693
Bse1I	ACTGG	3 cut(s)	564, 1088, 2277
Bse3DI	GCAATG	4 cut(s)	139, 167, 2092, 2529
Bse8I	GATNNNNATC	2 cut(s)	993, 1632
BseBI	CCWGG	6 cut(s)	67, 733, 963, 1167, 1520, 1839
BseDI	CCNNGG	5 cut(s)	65, 66, 527, 1518, 1892
BseGI	GGATG	7 cut(s)	360, 914, 1434, 1518, 1902, 2029, 2430
BseJI	GATNNNNATC	2 cut(s)	993, 1632
BseLI	CCNNNNNNNGG	6 cut(s)	533, 1667, 1991, 2013, 2145, 2693
BseMI	GCAATG	4 cut(s)	139, 167, 2092, 2529
BseMII	CTCAG	2 cut(s)	828, 2155
BseNI	ACTGG	3 cut(s)	564, 1088, 2277
BseRI	GAGGAG	3 cut(s)	800, 1359, 1698
BseSI	GKGCMC	1 cut(s)	1265
BseXI	GCAGC	8 cut(s)	24, 364, 861, 868, 871, 1405, 2146, 2569
BseYI	CCCAGC	1 cut(s)	931
BsgI	GTGCAG	3 cut(s)	460, 1965, 2153
Bsh1236I	CGCG	1 cut(s)	2334
Bsh1285I	CGRYCG	1 cut(s)	24
BshFI	GGCC	2 cut(s)	914, 1087
BshNI	GGYRCC	1 cut(s)	1262
BsiEI	CGRYCG	1 cut(s)	24
BsiHKCI	CYCGRG	1 cut(s)	2701
BsiSI	CCGG	1 cut(s)	14
BslFI	GGGAC	4 cut(s)	1732, 1971, 2259, 2387
BslI	CCNNNNNNNGG	6 cut(s)	533, 1667, 1991, 2013, 2145, 2693
BsmAI	GTCTC	4 cut(s)	385, 1452, 1621, 2710
BsmFI	GGGAC	4 cut(s)	1732, 1971, 2259, 2387
BsmI	GAATGC	4 cut(s)	65, 829, 1334, 2775
BsnI	GGCC	2 cut(s)	914, 1087
Bso31I	GGTCTC	1 cut(s)	1452
BsoBI	CYCGRG	1 cut(s)	2701
Bsp119I	TTCGAA	2 cut(s)	107, 327
Bsp1286I	GDGCHC	2 cut(s)	1019, 1265
Bsp1407I	TGTACA	1 cut(s)	2558
Bsp1720I	GCTNAGC	1 cut(s)	837
BspACI	CCGC	6 cut(s)	223, 1202, 1820, 2198, 2586, 2652
BspANI	GGCC	2 cut(s)	914, 1087
BspCNI	CTCAG	2 cut(s)	829, 2154
BspFNI	CGCG	1 cut(s)	2334
BspHI	TCATGA	2 cut(s)	2515, 2637
BspLI	GGNNCC	6 cut(s)	89, 1264, 1812, 2402, 2403, 2698
BspMAI	CTGCAG	3 cut(s)	382, 879, 1287
BspMI	ACCTGC	1 cut(s)	944
BspOI	GCTAGC	1 cut(s)	1224
BspPI	GGATC	7 cut(s)	410, 641, 770, 973, 989, 1110, 1251
BspT104I	TTCGAA	2 cut(s)	107, 327
BspT107I	GGYRCC	1 cut(s)	1262
BspTNI	GGTCTC	1 cut(s)	1452
BsrBI	CCGCTC	1 cut(s)	2652
BsrDI	GCAATG	4 cut(s)	139, 167, 2092, 2529
BsrGI	TGTACA	1 cut(s)	2558
BsrI	ACTGG	3 cut(s)	564, 1088, 2277
BssECI	CCNNGG	5 cut(s)	65, 66, 527, 1518, 1892
BssNI	GRCGYC	1 cut(s)	1745
BssT1I	CCWWGG	1 cut(s)	1892
Bst2UI	CCWGG	6 cut(s)	67, 733, 963, 1167, 1520, 1839
Bst6I	CTCTTC	1 cut(s)	1821
BstACI	GRCGYC	1 cut(s)	1745
BstAPI	GCANNNNNTGC	4 cut(s)	893, 1301, 1487, 2579
BstAUI	TGTACA	1 cut(s)	2558
BstBAI	YACGTR	1 cut(s)	2549
BstBI	TTCGAA	2 cut(s)	107, 327
BstC8I	GCNNGC	4 cut(s)	843, 879, 1222, 2650
BstDEI	CTNAG	8 cut(s)	447, 837, 983, 1247, 1463, 1500, 2141, 2780
BstDSI	CCRYGG	1 cut(s)	527
BstENI	CCTNNNNNAGG	1 cut(s)	1665
BstF5I	GGATG	7 cut(s)	360, 914, 1434, 1518, 1902, 2029, 2430
BstFNI	CGCG	1 cut(s)	2334
BstH2I	RGCGCY	1 cut(s)	248
BstHHI	GCGC	1 cut(s)	247
BstMAI	GTCTC	4 cut(s)	385, 1452, 1621, 2710
BstMCI	CGRYCG	1 cut(s)	24
BstNI	CCWGG	6 cut(s)	67, 733, 963, 1167, 1520, 1839
BstNSI	RCATGY	2 cut(s)	900, 1547
BstSCI	CCNGG	6 cut(s)	65, 731, 961, 1165, 1518, 1837
BstSFI	CTRYAG	6 cut(s)	378, 780, 875, 1283, 1845, 2031
BstSLI	GKGCMC	1 cut(s)	1265
BstUI	CGCG	1 cut(s)	2334
BstV1I	GCAGC	8 cut(s)	24, 364, 861, 868, 871, 1405, 2146, 2569
BstV2I	GAAGAC	4 cut(s)	96, 219, 659, 1482
BstX2I	RGATCY	6 cut(s)	443, 775, 965, 994, 1231, 1243
BstYI	RGATCY	6 cut(s)	443, 775, 965, 994, 1231, 1243
BsuI	GTATCC	1 cut(s)	717
BsuRI	GGCC	2 cut(s)	914, 1087
BtgI	CCRYGG	1 cut(s)	527
BtsCI	GGATG	7 cut(s)	360, 914, 1434, 1518, 1902, 2029, 2430
BtsIMutI	CAGTG	1 cut(s)	557
BveI	ACCTGC	1 cut(s)	944
Cac8I	GCNNGC	4 cut(s)	843, 879, 1222, 2650
CaiI	CAGNNNCTG	3 cut(s)	37, 938, 2582
CciI	TCATGA	2 cut(s)	2515, 2637
CfoI	GCGC	1 cut(s)	247
Cfr13I	GGNCC	7 cut(s)	912, 1085, 1841, 1850, 1865, 1931, 2401
CseI	GACGC	3 cut(s)	1198, 1487, 1734
CsiI	ACCWGGT	1 cut(s)	1165
CviAII	CATG	9 cut(s)	217, 897, 1181, 1217, 1301, 1472, 1544, 2516, 2638
DdeI	CTNAG	8 cut(s)	447, 837, 983, 1247, 1463, 1500, 2141, 2780
DraI	TTTAAA	1 cut(s)	724
DrdI	GACNNNNNNGTC	1 cut(s)	1848
DseDI	GACNNNNNNGTC	1 cut(s)	1848
Eam1104I	CTCTTC	1 cut(s)	1821
EarI	CTCTTC	1 cut(s)	1821
EciI	GGCGGA	1 cut(s)	1809
Eco130I	CCWWGG	1 cut(s)	1892
Eco24I	GRGCYC	1 cut(s)	1019
Eco31I	GGTCTC	1 cut(s)	1452
Eco32I	GATATC	1 cut(s)	1723
Eco47I	GGWCC	5 cut(s)	1841, 1850, 1865, 1931, 2401
Eco47III	AGCGCT	1 cut(s)	246
Eco57I	CTGAAG	4 cut(s)	1050, 2222, 2250, 2772
Eco88I	CYCGRG	1 cut(s)	2701
EcoNI	CCTNNNNNAGG	1 cut(s)	1665
EcoO109I	RGGNCCY	2 cut(s)	1850, 2401
EcoRII	CCWGG	6 cut(s)	65, 731, 961, 1165, 1518, 1837
EcoRV	GATATC	1 cut(s)	1723
EcoT14I	CCWWGG	1 cut(s)	1892
EcoT22I	ATGCAT	2 cut(s)	6, 1306
EcoT38I	GRGCYC	1 cut(s)	1019
ErhI	CCWWGG	1 cut(s)	1892
FaeI	CATG	9 cut(s)	220, 900, 1184, 1220, 1304, 1475, 1547, 2519, 2641
FaqI	GGGAC	4 cut(s)	1732, 1971, 2259, 2387
FatI	CATG	9 cut(s)	216, 896, 1180, 1216, 1300, 1471, 1543, 2515, 2637
FauI	CCCGC	1 cut(s)	1195
FbaI	TGATCA	1 cut(s)	2707
FblI	GTMKAC	2 cut(s)	76, 2734
Fnu4HI	GCNGC	9 cut(s)	38, 378, 875, 882, 885, 1419, 2135, 2583, 2586
FokI	GGATG	7 cut(s)	347, 921, 1421, 1525, 1909, 2036, 2437
FriOI	GRGCYC	1 cut(s)	1019
Fsp4HI	GCNGC	9 cut(s)	38, 378, 875, 882, 885, 1419, 2135, 2583, 2586
FspBI	CTAG	9 cut(s)	242, 545, 972, 1221, 1256, 1988, 2069, 2129, 2726
GlaI	GCGC	1 cut(s)	246
GluI	GCNGC	9 cut(s)	38, 378, 875, 882, 885, 1419, 2135, 2583, 2586
GsaI	CCCAGC	1 cut(s)	935
HaeII	RGCGCY	1 cut(s)	248
HaeIII	GGCC	2 cut(s)	914, 1087
HapII	CCGG	1 cut(s)	14
HgaI	GACGC	3 cut(s)	1198, 1487, 1734
HhaI	GCGC	1 cut(s)	247
Hin1I	GRCGYC	1 cut(s)	1745
Hin1II	CATG	9 cut(s)	220, 900, 1184, 1220, 1304, 1475, 1547, 2519, 2641
Hin6I	GCGC	1 cut(s)	245
HinP1I	GCGC	1 cut(s)	245
HincII	GTYRAC	2 cut(s)	2286, 2735
HindII	GTYRAC	2 cut(s)	2286, 2735
HindIII	AAGCTT	2 cut(s)	1738, 2262
HinfI	GANTC	8 cut(s)	73, 238, 1628, 1888, 2162, 2276, 2360, 2662
HpaII	CCGG	1 cut(s)	14
HphI	GGTGA	6 cut(s)	142, 251, 288, 1052, 1070, 1155
Hpy166II	GTNNAC	6 cut(s)	77, 959, 1931, 2286, 2316, 2735
Hpy8I	GTNNAC	6 cut(s)	77, 959, 1931, 2286, 2316, 2735
Hpy99I	CGWCG	4 cut(s)	22, 100, 1785, 1828
HpyCH4IV	ACGT	2 cut(s)	98, 2548
HpyF3I	CTNAG	8 cut(s)	447, 837, 983, 1247, 1463, 1500, 2141, 2780
HpySE526I	ACGT	2 cut(s)	98, 2548
Hsp92I	GRCGYC	1 cut(s)	1745
Hsp92II	CATG	9 cut(s)	220, 900, 1184, 1220, 1304, 1475, 1547, 2519, 2641
HspAI	GCGC	1 cut(s)	245
KflI	GGGWCCC	1 cut(s)	2401
Ksp22I	TGATCA	1 cut(s)	2707
LmnI	GCTCC	4 cut(s)	16, 93, 165, 2696
Lsp1109I	GCAGC	8 cut(s)	24, 364, 861, 868, 871, 1405, 2146, 2569
MabI	ACCWGGT	1 cut(s)	1165
MaeI	CTAG	9 cut(s)	242, 545, 972, 1221, 1256, 1988, 2069, 2129, 2726
MaeII	ACGT	2 cut(s)	98, 2548
MaeIII	GTNAC	4 cut(s)	1186, 1784, 2176, 2544
MbiI	CCGCTC	1 cut(s)	2652
MfeI	CAATTG	3 cut(s)	477, 1482, 2220
MflI	RGATCY	6 cut(s)	443, 775, 965, 994, 1231, 1243
MhlI	GDGCHC	2 cut(s)	1019, 1265
MlyI	GAGTC	2 cut(s)	82, 1882
MmeI	TCCRAC	3 cut(s)	777, 1660, 2017
Mph1103I	ATGCAT	2 cut(s)	6, 1306
MroXI	GAANNNNTTC	2 cut(s)	1332, 2345
MslI	CAYNNNNRTG	1 cut(s)	2517
MspA1I	CMGCKG	2 cut(s)	874, 2200
MspI	CCGG	1 cut(s)	14
MspR9I	CCNGG	6 cut(s)	67, 733, 963, 1167, 1520, 1839
MunI	CAATTG	3 cut(s)	477, 1482, 2220
Mva1269I	GAATGC	4 cut(s)	65, 829, 1334, 2775
MvaI	CCWGG	6 cut(s)	67, 733, 963, 1167, 1520, 1839
MvnI	CGCG	1 cut(s)	2334
NheI	GCTAGC	1 cut(s)	1220
NlaIII	CATG	9 cut(s)	220, 900, 1184, 1220, 1304, 1475, 1547, 2519, 2641
NlaIV	GGNNCC	6 cut(s)	89, 1264, 1812, 2402, 2403, 2698
NmuCI	GTSAC	2 cut(s)	1186, 1784
NsiI	ATGCAT	2 cut(s)	6, 1306
NspI	RCATGY	2 cut(s)	900, 1547
NspV	TTCGAA	2 cut(s)	107, 327
PaeR7I	CTCGAG	1 cut(s)	2701
PagI	TCATGA	2 cut(s)	2515, 2637
PasI	CCCWGGG	1 cut(s)	66
PciI	ACATGT	1 cut(s)	1543
PcsI	WCGNNNNNNNCGW	2 cut(s)	104, 1777
PctI	GAATGC	4 cut(s)	65, 829, 1334, 2775
PdmI	GAANNNNTTC	2 cut(s)	1332, 2345
PfeI	GAWTC	6 cut(s)	238, 1628, 2162, 2276, 2360, 2662
PflFI	GACNNNGTC	1 cut(s)	100
PflMI	CCANNNNNTGG	1 cut(s)	1991
PfoI	TCCNGGA	1 cut(s)	1837
PkrI	GCNGC	9 cut(s)	39, 379, 876, 883, 886, 1420, 2136, 2584, 2587
PleI	GAGTC	2 cut(s)	81, 1882
PpsI	GAGTC	2 cut(s)	81, 1882
Ppu21I	YACGTR	1 cut(s)	2549
PpuMI	RGGWCCY	2 cut(s)	1850, 2401
PscI	ACATGT	1 cut(s)	1543
PshBI	ATTAAT	2 cut(s)	683, 1857
Psp5II	RGGWCCY	2 cut(s)	1850, 2401
Psp6I	CCWGG	6 cut(s)	65, 731, 961, 1165, 1518, 1837
PspFI	CCCAGC	1 cut(s)	931
PspGI	CCWGG	6 cut(s)	65, 731, 961, 1165, 1518, 1837
PspN4I	GGNNCC	6 cut(s)	89, 1264, 1812, 2402, 2403, 2698
PspPI	GGNCC	7 cut(s)	912, 1085, 1841, 1850, 1865, 1931, 2401
PspPPI	RGGWCCY	2 cut(s)	1850, 2401
PspXI	VCTCGAGB	1 cut(s)	2701
PstI	CTGCAG	3 cut(s)	382, 879, 1287
PstNI	CAGNNNCTG	3 cut(s)	37, 938, 2582
PsuI	RGATCY	6 cut(s)	443, 775, 965, 994, 1231, 1243
PsyI	GACNNNGTC	1 cut(s)	100
PvuII	CAGCTG	1 cut(s)	874
RseI	CAYNNNNRTG	1 cut(s)	2517
SalI	GTCGAC	1 cut(s)	2733
SatI	GCNGC	9 cut(s)	38, 378, 875, 882, 885, 1419, 2135, 2583, 2586
Sau96I	GGNCC	7 cut(s)	912, 1085, 1841, 1850, 1865, 1931, 2401
ScaI	AGTACT	1 cut(s)	1833
SchI	GAGTC	2 cut(s)	82, 1882
ScrFI	CCNGG	6 cut(s)	67, 733, 963, 1167, 1520, 1839
SduI	GDGCHC	2 cut(s)	1019, 1265
SexAI	ACCWGGT	1 cut(s)	1165
SfcI	CTRYAG	6 cut(s)	378, 780, 875, 1283, 1845, 2031
Sfr274I	CTCGAG	1 cut(s)	2701
SfuI	TTCGAA	2 cut(s)	107, 327
SinI	GGWCC	5 cut(s)	1841, 1850, 1865, 1931, 2401
SlaI	CTCGAG	1 cut(s)	2701
SmiMI	CAYNNNNRTG	1 cut(s)	2517
SmlI	CTYRAG	3 cut(s)	388, 1018, 2701
SmoI	CTYRAG	3 cut(s)	388, 1018, 2701
SpeI	ACTAGT	2 cut(s)	2128, 2725
SsiI	CCGC	6 cut(s)	223, 1202, 1820, 2198, 2586, 2652
SspI	AATATT	3 cut(s)	206, 1555, 2458
SspMI	CTAG	9 cut(s)	242, 545, 972, 1221, 1256, 1988, 2069, 2129, 2726
StyD4I	CCNGG	6 cut(s)	65, 731, 961, 1165, 1518, 1837
StyI	CCWWGG	1 cut(s)	1892
TaiI	ACGT	2 cut(s)	101, 2551
TatI	WGTACW	4 cut(s)	1831, 1911, 2125, 2558
TauI	GCSGC	1 cut(s)	2588
TfiI	GAWTC	6 cut(s)	238, 1628, 2162, 2276, 2360, 2662
TscAI	CASTG	1 cut(s)	564
TseFI	GTSAC	2 cut(s)	1186, 1784
TseI	GCWGC	8 cut(s)	37, 377, 874, 881, 884, 1418, 2134, 2582
Tsp45I	GTSAC	2 cut(s)	1186, 1784
TspGWI	ACGGA	3 cut(s)	1304, 1519, 2551
TspRI	CASTG	1 cut(s)	564
Tth111I	GACNNNGTC	1 cut(s)	100
Van91I	CCANNNNNTGG	1 cut(s)	1991
VpaK11BI	GGWCC	5 cut(s)	1841, 1850, 1865, 1931, 2401
VspI	ATTAAT	2 cut(s)	683, 1857
XagI	CCTNNNNNAGG	1 cut(s)	1665
XceI	RCATGY	2 cut(s)	900, 1547
XhoI	CTCGAG	1 cut(s)	2701
XmiI	GTMKAC	2 cut(s)	76, 2734
XmnI	GAANNNNTTC	2 cut(s)	1332, 2345
XspI	CTAG	9 cut(s)	242, 545, 972, 1221, 1256, 1988, 2069, 2129, 2726
ZrmI	AGTACT	1 cut(s)	1833
Zsp2I	ATGCAT	2 cut(s)	6, 1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.