Rmu_sc0034746.1_g000002

Phosphatidylinositol 4-kinase gamma 2-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0034746.1
Physical Location & Seq
Reverse (-)
8509 .. 10944
2436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0034746.1_g000002.1.cds

Sequence Viewer

Length: 1746 bp
atgtctgttgctgatattgctttgagtccgattcgcaaagagtcggtgcgttctgccgggttttgtgctagccaggtggggcattgctccagcgaatcgattatactatatctcagggtcgccggctctgtgatccccatgcgtgtcttagagtccgactccatagcttcggtgaagctgaggatccaaacatgcaaagggtttgtggtgaagaagcagaagcttgtgtttggaggcagggaattggcccggaacgatactctcattaaggactacggcattactggtgagaatgttttgcatttggtgctgagactttccgatcttctgcacataactgttaggactatttgcggcaaagagtttgaattccgtgttgatagacaccgaaatgtcgggtatattaagcagcggatcgtcaagaaggggaaaggttatgatgatcctgaggaacaggagctcttctgcaacggcgaaaggctcgatgaccagaggctcattgatgatattagcaagagcaatgacgatgtcattcacttggtggttcagaagtctgcaaaggtcagagctaagcgtttcgcgaaagatttggagctctcggtggtggcaattgtctcgaatgaaagaggatttaacggagaagatgacaatcgaagcaatgggaatcacgccattgcatgggattcgcccggtagacttccagatttcttgttggaaccaatcattgtcaatcccaagattgaattgccgtcttatgtgtgggatatgatcaactctacgtacgatggtatggcgaagggcagtcagcccataaggtcctctgaggggacaggagggacttacttcatgcaagattcttctcaggagatcatttcggttttcaagcctatcgatgaggagcctaatgcagtcaacaatccccacggcttacctgtatcgccagatggggaagggttgaaaagaggaacgagggtaggagaaggagccatcagggaagtagctgcattcttgttagatcatcccagaagcgggcctcgcacattatctggcgagactatgggctttgctggggtgccacctacaatgttagttaggtgcttgcacaagggatttaatcatccccatggatttgatagcttatctaaacatgttaagattggatcattgcaaatgttcatgaagaatgatggaagttgcgaggacatgggtcctggtcgttttcccatggaggaggtgcacaagattagtgttttcgatatcagaatggctaatgcagataggcatgctggcaacattttgtttggaaaaggtgaagatggtcagactgtgctcattccaattgatcatggatactgcctgcctgagaattttgaagattgcaccttcgattggctttattggccacaagctcgccagccttattcagctgacatcattgagtacataaaatctttggatgctgagcaagatattgctcttctcaagttttatgggtgggatattcctattaagtgtgcccgcactcttcgtatctcaaccatgcttttgaagaaaggggtggagagaggtctcacgccctttgtcattggtagcctcatgtgtagggagaatattaacaagaaatcagtgatcgaggacattgtgagtgaagctcaggattctttgcttcccggcatgagtgaagccgcatttctcaaagctatttctgagatcatggattcccggcttgacaagcttgcaaagtaa
Functional Annotation

Protein Analysis

581

Amino Acids

64.68

Weight (kDa)

6.15

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1072
AccB7I CCANNNNNTGG 1 cut(s) 678
AccI GTMKAC 1 cut(s) 694
AccII CGCG 1 cut(s) 581
AciI CCGC 5 cut(s) 354, 412, 1029, 1519, 1686
AclWI GGATC 6 cut(s) 127, 178, 191, 422, 437, 1168
AcoI YGGCCR 1 cut(s) 1400
AcsI RAATTY 2 cut(s) 368, 1366
AdeI CACNNNGTG 1 cut(s) 541
AfaI GTAC 2 cut(s) 782, 1442
AfiI CCNNNNNNNGG 5 cut(s) 678, 825, 1028, 1029, 1389
AflIII ACRYGT 1 cut(s) 1147
AgsI TTSAA 6 cut(s) 368, 743, 883, 958, 1373, 1549
AjnI CCWGG 2 cut(s) 72, 1210
Alw21I GWGCWC 4 cut(s) 462, 597, 1239, 1332
Alw26I GTCTC 4 cut(s) 307, 619, 1046, 1574
Alw44I GTGCAC 1 cut(s) 1235
AlwI GGATC 6 cut(s) 127, 178, 191, 422, 437, 1168
AoxI GGCC 3 cut(s) 246, 1031, 1400
ApaLI GTGCAC 1 cut(s) 1235
ApeKI GCWGC 2 cut(s) 409, 1001
ApoI RAATTY 2 cut(s) 368, 1366
AspS9I GGNCC 4 cut(s) 247, 816, 1031, 1208
AsuC2I CCSGG 5 cut(s) 58, 250, 690, 1671, 1723
AsuHPI GGTGA 4 cut(s) 184, 220, 299, 1322
AsuNHI GCTAGC 1 cut(s) 68
AvaII GGWCC 2 cut(s) 816, 1208
AxyI CCTNAGG 1 cut(s) 447
BaeGI GKGCMC 2 cut(s) 1239, 1519
BalI TGGCCA 1 cut(s) 1402
BamHI GGATCC 1 cut(s) 183
BanI GGYRCC 1 cut(s) 1072
BanII GRGCYC 2 cut(s) 462, 597
Bbv12I GWGCWC 4 cut(s) 462, 597, 1239, 1332
BbvCI CCTCAGC 1 cut(s) 179
BbvI GCAGC 2 cut(s) 421, 988
BccI CCATC 5 cut(s) 779, 938, 995, 1181, 1310
BceAI ACGGC 4 cut(s) 292, 487, 733, 940
BcgI CGANNNNNNTGC 4 cut(s) 597, 631, 666, 700
BciT130I CCWGG 2 cut(s) 74, 1212
BciVI GTATCC 1 cut(s) 1343
BclI TGATCA 2 cut(s) 768, 1342
BcnI CCSGG 5 cut(s) 58, 250, 690, 1671, 1723
BcoDI GTCTC 4 cut(s) 307, 619, 1046, 1574
BfaI CTAG 1 cut(s) 69
BfuI GTATCC 1 cut(s) 1343
BisI GCNGC 4 cut(s) 355, 410, 1002, 1686
BlpI GCTNAGC 2 cut(s) 570, 1461
BlsI GCNGC 4 cut(s) 356, 411, 1003, 1687
Bme1390I CCNGG 7 cut(s) 58, 74, 250, 690, 1212, 1671, 1723
Bme18I GGWCC 2 cut(s) 816, 1208
BmgT120I GGNCC 4 cut(s) 247, 816, 1031, 1208
BmiI GGNNCC 6 cut(s) 185, 717, 900, 985, 1074, 1209
BmrFI CCNGG 7 cut(s) 58, 74, 250, 690, 1212, 1671, 1723
BmsI GCATC 1 cut(s) 1447
BmtI GCTAGC 1 cut(s) 72
BoxI GACNNNNGTC 1 cut(s) 1206
BplI GAGNNNNNCTC 4 cut(s) 143, 175, 1636, 1668
BpmI CTGGAG 1 cut(s) 73
Bpu10I CCTNAGC 2 cut(s) 179, 1653
Bpu1102I GCTNAGC 2 cut(s) 570, 1461
BpuEI CTTGAG 1 cut(s) 1466
BpuMI CCSGG 5 cut(s) 58, 250, 690, 1671, 1723
Bsa29I ATCGAT 2 cut(s) 98, 891
BsaAI YACGTR 1 cut(s) 780
BsaBI GATNNNNATC 1 cut(s) 648
BsaI GGTCTC 1 cut(s) 1574
BsaJI CCNNGG 3 cut(s) 922, 1123, 1224
Bsc4I CCNNNNNNNGG 5 cut(s) 678, 825, 1028, 1029, 1389
Bse118I RCCGGY 1 cut(s) 122
Bse1I ACTGG 1 cut(s) 289
Bse21I CCTNAGG 1 cut(s) 447
Bse3DI GCAATG 5 cut(s) 82, 526, 664, 672, 1163
Bse8I GATNNNNATC 1 cut(s) 648
BseBI CCWGG 2 cut(s) 74, 1212
BseCI ATCGAT 2 cut(s) 98, 891
BseDI CCNNGG 3 cut(s) 922, 1123, 1224
BseGI GGATG 3 cut(s) 1018, 1117, 1462
BseJI GATNNNNATC 1 cut(s) 648
BseLI CCNNNNNNNGG 5 cut(s) 678, 825, 1028, 1029, 1389
BseMI GCAATG 5 cut(s) 82, 526, 664, 672, 1163
BseNI ACTGG 1 cut(s) 289
BseRI GAGGAG 2 cut(s) 911, 1244
BseSI GKGCMC 2 cut(s) 1239, 1519
BseXI GCAGC 2 cut(s) 421, 988
BseYI CCCAGC 1 cut(s) 1067
BsgI GTGCAG 1 cut(s) 314
Bsh1236I CGCG 1 cut(s) 581
BshFI GGCC 3 cut(s) 248, 1033, 1402
BshNI GGYRCC 1 cut(s) 1072
BshVI ATCGAT 2 cut(s) 98, 891
BsiHKAI GWGCWC 4 cut(s) 462, 597, 1239, 1332
BsiSI CCGG 6 cut(s) 57, 123, 250, 690, 1671, 1723
BsiWI CGTACG 1 cut(s) 780
BslFI GGGAC 2 cut(s) 841, 850
BslI CCNNNNNNNGG 5 cut(s) 678, 825, 1028, 1029, 1389
BsmAI GTCTC 4 cut(s) 307, 619, 1046, 1574
BsmFI GGGAC 2 cut(s) 841, 850
BsmI GAATGC 1 cut(s) 1004
BsnI GGCC 3 cut(s) 248, 1033, 1402
Bso31I GGTCTC 1 cut(s) 1574
Bsp1286I GDGCHC 5 cut(s) 462, 597, 1239, 1332, 1519
Bsp1720I GCTNAGC 2 cut(s) 570, 1461
Bsp19I CCATGG 2 cut(s) 1123, 1224
Bsp68I TCGCGA 1 cut(s) 581
BspACI CCGC 5 cut(s) 354, 412, 1029, 1519, 1686
BspANI GGCC 3 cut(s) 248, 1033, 1402
BspDI ATCGAT 2 cut(s) 98, 891
BspFNI CGCG 1 cut(s) 581
BspHI TCATGA 1 cut(s) 1176
BspLI GGNNCC 6 cut(s) 185, 717, 900, 985, 1074, 1209
BspOI GCTAGC 1 cut(s) 72
BspPI GGATC 6 cut(s) 127, 178, 191, 422, 437, 1168
BspQI GCTCTTC 2 cut(s) 467, 1482
BspT107I GGYRCC 1 cut(s) 1072
BspTNI GGTCTC 1 cut(s) 1574
BsrDI GCAATG 5 cut(s) 82, 526, 664, 672, 1163
BsrFI RCCGGY 1 cut(s) 122
BsrI ACTGG 1 cut(s) 289
BssAI RCCGGY 1 cut(s) 122
BssECI CCNNGG 3 cut(s) 922, 1123, 1224
BssT1I CCWWGG 2 cut(s) 1123, 1224
Bst2UI CCWGG 2 cut(s) 74, 1212
Bst4CI ACNGT 2 cut(s) 340, 1327
Bst6I CTCTTC 3 cut(s) 467, 1482, 1530
BstAPI GCANNNNNTGC 1 cut(s) 307
BstBAI YACGTR 1 cut(s) 780
BstDSI CCRYGG 3 cut(s) 922, 1123, 1224
BstF5I GGATG 3 cut(s) 1018, 1117, 1462
BstFNI CGCG 1 cut(s) 581
BstMAI GTCTC 4 cut(s) 307, 619, 1046, 1574
BstMWI GCNNNNNNNGC 5 cut(s) 17, 307, 1035, 1399, 1732
BstNI CCWGG 2 cut(s) 74, 1212
BstNSI RCATGY 3 cut(s) 195, 1151, 1286
BstPAI GACNNNNGTC 1 cut(s) 1206
BstSCI CCNGG 7 cut(s) 56, 72, 248, 688, 1210, 1669, 1721
BstSLI GKGCMC 2 cut(s) 1239, 1519
BstSNI TACGTA 1 cut(s) 780
BstUI CGCG 1 cut(s) 581
BstV1I GCAGC 2 cut(s) 421, 988
BstX2I RGATCY 1 cut(s) 183
BstYI RGATCY 1 cut(s) 183
Bsu15I ATCGAT 2 cut(s) 98, 891
Bsu36I CCTNAGG 1 cut(s) 447
BsuI GTATCC 1 cut(s) 1343
BsuRI GGCC 3 cut(s) 248, 1033, 1402
BsuTUI ATCGAT 2 cut(s) 98, 891
BtgI CCRYGG 3 cut(s) 922, 1123, 1224
BtsCI GGATG 3 cut(s) 1018, 1117, 1462
BtsIMutI CAGTG 1 cut(s) 1632
BtuMI TCGCGA 1 cut(s) 581
CciI TCATGA 1 cut(s) 1176
Cfr10I RCCGGY 1 cut(s) 122
Cfr13I GGNCC 4 cut(s) 247, 816, 1031, 1208
ClaI ATCGAT 2 cut(s) 98, 891
Csp6I GTAC 2 cut(s) 781, 1441
CviQI GTAC 2 cut(s) 781, 1441
DraIII CACNNNGTG 1 cut(s) 541
EaeI YGGCCR 1 cut(s) 1400
Eam1104I CTCTTC 3 cut(s) 467, 1482, 1530
EarI CTCTTC 3 cut(s) 467, 1482, 1530
Ecl136II GAGCTC 2 cut(s) 460, 595
Eco105I TACGTA 1 cut(s) 780
Eco130I CCWWGG 2 cut(s) 1123, 1224
Eco24I GRGCYC 2 cut(s) 462, 597
Eco31I GGTCTC 1 cut(s) 1574
Eco32I GATATC 1 cut(s) 1258
Eco47I GGWCC 2 cut(s) 816, 1208
Eco53kI GAGCTC 2 cut(s) 460, 595
Eco81I CCTNAGG 1 cut(s) 447
EcoICRI GAGCTC 2 cut(s) 460, 595
EcoO109I RGGNCCY 2 cut(s) 816, 1208
EcoRI GAATTC 1 cut(s) 368
EcoRII CCWGG 2 cut(s) 72, 1210
EcoRV GATATC 1 cut(s) 1258
EcoT14I CCWWGG 2 cut(s) 1123, 1224
EcoT38I GRGCYC 2 cut(s) 462, 597
ErhI CCWWGG 2 cut(s) 1123, 1224
FaqI GGGAC 2 cut(s) 841, 850
FauI CCCGC 2 cut(s) 1022, 1526
FbaI TGATCA 2 cut(s) 768, 1342
FblI GTMKAC 1 cut(s) 694
Fnu4HI GCNGC 4 cut(s) 355, 410, 1002, 1686
FokI GGATG 3 cut(s) 1005, 1104, 1469
FriOI GRGCYC 2 cut(s) 462, 597
Fsp4HI GCNGC 4 cut(s) 355, 410, 1002, 1686
FspBI CTAG 1 cut(s) 69
GluI GCNGC 4 cut(s) 355, 410, 1002, 1686
GsaI CCCAGC 1 cut(s) 1071
GsuI CTGGAG 1 cut(s) 73
HaeIII GGCC 3 cut(s) 248, 1033, 1402
HapII CCGG 6 cut(s) 57, 123, 250, 690, 1671, 1723
HincII GTYRAC 1 cut(s) 913
HindII GTYRAC 1 cut(s) 913
HindIII AAGCTT 2 cut(s) 221, 1733
HpaII CCGG 6 cut(s) 57, 123, 250, 690, 1671, 1723
HphI GGTGA 4 cut(s) 184, 220, 299, 1322
Hpy166II GTNNAC 3 cut(s) 695, 913, 1237
Hpy188I TCNGA 9 cut(s) 30, 157, 322, 549, 566, 823, 1262, 1323, 1708
Hpy188III TCNNGA 8 cut(s) 421, 446, 580, 616, 701, 863, 1177, 1655
Hpy8I GTNNAC 3 cut(s) 695, 913, 1237
HpyAV CCTTC 5 cut(s) 418, 790, 944, 974, 1393
HpyCH4III ACNGT 2 cut(s) 340, 1327
HpyCH4IV ACGT 1 cut(s) 779
HpyF10VI GCNNNNNNNGC 5 cut(s) 17, 307, 1035, 1399, 1732
HpySE526I ACGT 1 cut(s) 779
KroI GCCGGC 1 cut(s) 122
KroNI GCCGGC 1 cut(s) 124
Ksp22I TGATCA 2 cut(s) 768, 1342
LguI GCTCTTC 2 cut(s) 467, 1482
LmnI GCTCC 5 cut(s) 92, 457, 592, 898, 983
Lsp1109I GCAGC 2 cut(s) 421, 988
LweI GCATC 1 cut(s) 1447
MaeI CTAG 1 cut(s) 69
MaeII ACGT 1 cut(s) 779
MfeI CAATTG 2 cut(s) 609, 1338
MflI RGATCY 1 cut(s) 183
MhlI GDGCHC 5 cut(s) 462, 597, 1239, 1332, 1519
MlsI TGGCCA 1 cut(s) 1402
MluCI AATT 6 cut(s) 242, 368, 609, 743, 1338, 1366
MluNI TGGCCA 1 cut(s) 1402
MlyI GAGTC 4 cut(s) 34, 50, 152, 161
MmeI TCCRAC 2 cut(s) 180, 693
Mox20I TGGCCA 1 cut(s) 1402
MroNI GCCGGC 1 cut(s) 122
MscI TGGCCA 1 cut(s) 1402
MseI TTAA 7 cut(s) 267, 405, 633, 1113, 1152, 1509, 1614
MslI CAYNNNNRTG 2 cut(s) 390, 1122
Msp20I TGGCCA 1 cut(s) 1402
MspA1I CMGCKG 2 cut(s) 412, 1427
MspI CCGG 6 cut(s) 57, 123, 250, 690, 1671, 1723
MspR9I CCNGG 7 cut(s) 58, 74, 250, 690, 1212, 1671, 1723
MunI CAATTG 2 cut(s) 609, 1338
Mva1269I GAATGC 1 cut(s) 1004
MvaI CCWGG 2 cut(s) 74, 1212
MvnI CGCG 1 cut(s) 581
MwoI GCNNNNNNNGC 5 cut(s) 17, 307, 1035, 1399, 1732
NaeI GCCGGC 1 cut(s) 124
NciI CCSGG 5 cut(s) 58, 250, 690, 1671, 1723
NcoI CCATGG 2 cut(s) 1123, 1224
NgoMIV GCCGGC 1 cut(s) 122
NheI GCTAGC 1 cut(s) 68
NlaIV GGNNCC 6 cut(s) 185, 717, 900, 985, 1074, 1209
NruI TCGCGA 1 cut(s) 581
NspI RCATGY 3 cut(s) 195, 1151, 1286
PaeI GCATGC 1 cut(s) 1286
PagI TCATGA 1 cut(s) 1176
PciI ACATGT 1 cut(s) 1147
PciSI GCTCTTC 2 cut(s) 467, 1482
PctI GAATGC 1 cut(s) 1004
PdiI GCCGGC 1 cut(s) 124
PfeI GAWTC 7 cut(s) 31, 95, 664, 683, 854, 1658, 1718
Pfl23II CGTACG 1 cut(s) 780
PflFI GACNNNGTC 1 cut(s) 527
PflMI CCANNNNNTGG 1 cut(s) 678
PkrI GCNGC 4 cut(s) 356, 411, 1003, 1687
PleI GAGTC 4 cut(s) 33, 49, 152, 160
PpsI GAGTC 4 cut(s) 33, 49, 152, 160
Ppu21I YACGTR 1 cut(s) 780
PpuMI RGGWCCY 2 cut(s) 816, 1208
PscI ACATGT 1 cut(s) 1147
PshAI GACNNNNGTC 1 cut(s) 1206
Psp124BI GAGCTC 2 cut(s) 462, 597
Psp5II RGGWCCY 2 cut(s) 816, 1208
Psp6I CCWGG 2 cut(s) 72, 1210
PspFI CCCAGC 1 cut(s) 1067
PspGI CCWGG 2 cut(s) 72, 1210
PspLI CGTACG 1 cut(s) 780
PspN4I GGNNCC 6 cut(s) 185, 717, 900, 985, 1074, 1209
PspPI GGNCC 4 cut(s) 247, 816, 1031, 1208
PspPPI RGGWCCY 2 cut(s) 816, 1208
PsuI RGATCY 1 cut(s) 183
PsyI GACNNNGTC 1 cut(s) 527
PvuII CAGCTG 1 cut(s) 1427
RruI TCGCGA 1 cut(s) 581
RsaI GTAC 2 cut(s) 782, 1442
RsaNI GTAC 2 cut(s) 781, 1441
RseI CAYNNNNRTG 2 cut(s) 390, 1122
SacI GAGCTC 2 cut(s) 462, 597
SapI GCTCTTC 2 cut(s) 467, 1482
SaqAI TTAA 7 cut(s) 267, 405, 633, 1113, 1152, 1509, 1614
SatI GCNGC 4 cut(s) 355, 410, 1002, 1686
Sau96I GGNCC 4 cut(s) 247, 816, 1031, 1208
SchI GAGTC 4 cut(s) 34, 50, 152, 161
ScrFI CCNGG 7 cut(s) 58, 74, 250, 690, 1212, 1671, 1723
SduI GDGCHC 5 cut(s) 462, 597, 1239, 1332, 1519
SfaNI GCATC 1 cut(s) 1447
SinI GGWCC 2 cut(s) 816, 1208
SmiMI CAYNNNNRTG 2 cut(s) 390, 1122
SmlI CTYRAG 1 cut(s) 1481
SmoI CTYRAG 1 cut(s) 1481
SnaBI TACGTA 1 cut(s) 780
SphI GCATGC 1 cut(s) 1286
Sse9I AATT 6 cut(s) 242, 368, 609, 743, 1338, 1366
SsiI CCGC 5 cut(s) 354, 412, 1029, 1519, 1686
SspI AATATT 1 cut(s) 1612
SspMI CTAG 1 cut(s) 69
SstI GAGCTC 2 cut(s) 462, 597
StyD4I CCNGG 7 cut(s) 56, 72, 248, 688, 1210, 1669, 1721
StyI CCWWGG 2 cut(s) 1123, 1224
TaaI ACNGT 2 cut(s) 340, 1327
TaiI ACGT 1 cut(s) 782
TaqI TCGA 8 cut(s) 98, 483, 617, 652, 891, 1254, 1386, 1632
TasI AATT 6 cut(s) 242, 368, 609, 743, 1338, 1366
TatI WGTACW 1 cut(s) 1440
TauI GCSGC 2 cut(s) 357, 1688
TfiI GAWTC 7 cut(s) 31, 95, 664, 683, 854, 1658, 1718
Tru1I TTAA 7 cut(s) 267, 405, 633, 1113, 1152, 1509, 1614
Tru9I TTAA 7 cut(s) 267, 405, 633, 1113, 1152, 1509, 1614
TscAI CASTG 1 cut(s) 1632
TseI GCWGC 2 cut(s) 409, 1001
TspDTI ATGAA 4 cut(s) 636, 835, 1165, 1193
TspGWI ACGGA 2 cut(s) 362, 651
TspRI CASTG 1 cut(s) 1632
Tth111I GACNNNGTC 1 cut(s) 527
Van91I CCANNNNNTGG 1 cut(s) 678
VneI GTGCAC 1 cut(s) 1235
VpaK11BI GGWCC 2 cut(s) 816, 1208
XapI RAATTY 2 cut(s) 368, 1366
XceI RCATGY 3 cut(s) 195, 1151, 1286
XmiI GTMKAC 1 cut(s) 694
XspI CTAG 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.