Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0002728

Physical Location & Seq

Genomic Coordinates Reverse (-)

64400039 .. 64402636

Gene Structure 2598 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG431300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGGGTTTTGAATCATCGCTTCCACCGCCATTCGCCTCTTCCTTGGCATCTGGGCCGAATAGAAAGCTTTCGGATCTCCAGGCTATTACTGTTAGGACTGTGTGTGGTAAGGAGTTTGAGTTCCATGTTGAGAGGAGTACGAATGTGGGTTATCTGAAGCAGCAGATTGCTAAGAAAGGGAAGGGGTCTGTTGATGTCGAAGATCAGGAACTCATATTTGATGGTGAAGAGCTTGAAGATCAGAGACTGATTAATGATATATGTACAAGTAACGATGCTGTTATTCATTTGCTGGTCCGGAAATCTGCTGAGGTTGGAGCTAAACCTATAGAGAAGGATTTTCCAGAGTCATTTGAGGCTTTAAATTTGAATGAGAAGAAGCCTGCCTTAGCCAGAGAAATTGTGGGATGTCAAGCTTTAGAGAGGAAAGCAATTGGAAGAGAACTCGTTTTGGAACCTCTAATTGGAAATCCTGACATTGAATTTTCGTTAGGGATTAAGAAGTTGATTTCCTCCACTTTGGATGGGCTAGAGAGAGGCTGTCAGCCAGTTAGCTCTTCGGAGGGAACTGGTGGAACTTATTTCATGCCAGACTCTTCTGGTCTCAAGTATGTTTCTGTCTTTAAGCCAATCGACGAGGAACCGATGGCAATGAATAACCCTCGGGGATTGACCTTGTCATTGGATGGTGAAGGTTTGAAGAAAGGTACAAGGGTCGGAGAAGGGGCATTGAGGGAAGTTGCAGCTTACATTTTGGATCATCCAAGGACCGGACCTCGTACATTCTATAATGAGGAGAAGGGCTTCGCCGGGGTGCCACCCACAATTATGGTCAAGTGCTTGCACAAAGGATTTAATCATCCAGAAGGTTATGATTCTGCTGCCAAGAACATGAAGATCGGATCACTTCAGATGTTCATGAAAAACAATGGAAGTTGTGAGGATATTGGTCCTGGTGCTTTTCCAGTGCACGAGGTACATAAAATTTCTATGCTGGACATGAGGTTGGCAAATGCAGACAGGCATGCTGGAAACATACTGATGAGCAGACAGAGTGAAGACAGTCAGATTGTGCTTATTCCGATTGATCATGGCTATTGTTTGCCTGAGAATTTTGGAGAGTGCACATTCGACTGGCTTTCCTGGCCTCAAGCTAAGCAACATTATCAGTCCGAATCTCTGAACTACATCCAATCACTAGATGCAGAAAAAGATATTGACCTTTTAAGGTTCTTTGGATGGAACCTACCACCTGAATGTGCCCGCACTCTCCGCATTGCCACCATGCTACTAAAAAAAGGTGCAGAGAGAGGACTCACTCCCTTTGACATCGGAAGCATCATGTGTTTGGAGACTTCGAAGAAAGAACCCGCTATCGAACTGATCATTAAAGAAGCAAAAGAACTTCCGGGAACAAGTGAAGCTTCATTTCTAGAATCTTTGTCATCAATCATGGATCGACACCTGGATGAGCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005777 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008289 GO:0009719 GO:0009725 GO:0009737 GO:0009909 GO:0009987 GO:0010033 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0033993 GO:0035091 GO:0042221 GO:0042579 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0097305 GO:1901700 GO:1902074 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03320 map03320

Pfam Domains

Protein Families

PI3_PI4_kinase ubiquitin

Protein Analysis

492

Amino Acids

54.35

Weight (kDa)

5.21

Isoelectric Point (pI)

45.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ubiquitin	PF00240	29 - 101	2e-13	Ubiquitin family
Rad60-SLD	PF11976	29 - 99	1.6e-08	Ubiquitin-2 like Rad60 SUMO-like
PI3_PI4_kinase	PF00454	190 - 443	4.4e-48	Phosphatidylinositol 3- and 4-kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24240 AT5G24240
fragaria_vesca	FvH4_5g04790 FvH4_7g31640 FvH4_7g31640
malus_domestica	MD06G1109000.v1.1 MD14G1129900.v1.1
prunus_persica	Prupe.2G310500_v2.0.a1 Prupe.2G310500_v2.0.a1 Prupe.5G121800_v2.0.a1
pyrus_communis	pycom06g10230
rosa_chinensis	RchiOBHm_Chr1g0380721 RchiOBHm_Chr7g0194461
rosa_laevigata	RLG00000004199 RLG00000026274
rosa_multiflora	Rmu_co8342205.1_g000001 Rmu_co8403341.1_g000001 Rmu_sc0001637.1_g000011 Rmu_sc0006267.1_g000003 Rmu_sc0034746.1_g000002 Rmu_ssc0000261.1_g000026
rosa_roxburghii	Rroxscaffold_3G00261340 Rroxscaffold_4G00279080
rosa_rugosa	Rorug01G0423900 Rorug07G0015800
rosa_samantha	Rh1AG448000 Rh1BG401100 Rh1BG403500 Rh1CG415500 Rh1CG417800 Rh1DG431300 Rh1DG433800 Rh7AG143100 Rh7BG143600 Rh7CG147400 Rh7DG145000
rosa_wichuraiana	Rw0G005880 Rw1G039000 Rw7G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	814
AccIII	TCCGGA	1 cut(s)	297
AciI	CCGC	4 cut(s)	26, 1264, 1273, 1371
AclWI	GGATC	4 cut(s)	81, 765, 910, 1464
AcsI	RAATTY	4 cut(s)	364, 482, 984, 1111
AcuI	CTGAAG	2 cut(s)	176, 893
AfaI	GTAC	5 cut(s)	139, 265, 709, 781, 978
AfiI	CCNNNNNNNGG	2 cut(s)	464, 770
AgsI	TTSAA	5 cut(s)	11, 236, 370, 482, 700
AjnI	CCWGG	4 cut(s)	78, 952, 1142, 1464
AjuI	GAANNNNNNNTTGG	2 cut(s)	447, 479
AloI	GAACNNNNNNTCC	2 cut(s)	104, 136
AluBI	AGCT	9 cut(s)	67, 232, 320, 416, 555, 746, 1154, 1424, 1474
AluI	AGCT	9 cut(s)	67, 232, 320, 416, 555, 746, 1154, 1424, 1474
Alw21I	GWGCWC	2 cut(s)	972, 1127
Alw26I	GTCTC	3 cut(s)	238, 608, 1346
Alw44I	GTGCAC	2 cut(s)	968, 1123
AlwI	GGATC	4 cut(s)	81, 765, 910, 1464
AlwNI	CAGNNNCTG	1 cut(s)	247
Ama87I	CYCGRG	1 cut(s)	663
Aor13HI	TCCGGA	1 cut(s)	297
AoxI	GGCC	2 cut(s)	53, 1145
ApaLI	GTGCAC	2 cut(s)	968, 1123
ApeKI	GCWGC	3 cut(s)	160, 743, 881
ApoI	RAATTY	4 cut(s)	364, 482, 984, 1111
AseI	ATTAAT	1 cut(s)	252
Asp700I	GAANNNNTTC	2 cut(s)	67, 803
AspS9I	GGNCC	5 cut(s)	53, 295, 768, 773, 950
AsuC2I	CCSGG	2 cut(s)	811, 1410
AsuHPI	GGTGA	2 cut(s)	236, 701
AsuII	TTCGAA	1 cut(s)	1358
AvaI	CYCGRG	1 cut(s)	663
AvaII	GGWCC	4 cut(s)	295, 768, 773, 950
BaeGI	GKGCMC	3 cut(s)	972, 1127, 1264
BaeI	ACNNNNGTAYC	2 cut(s)	699, 732
BanI	GGYRCC	1 cut(s)	814
BauI	CACGAG	1 cut(s)	971
BbsI	GAAGAC	1 cut(s)	1065
Bbv12I	GWGCWC	2 cut(s)	972, 1127
BbvCI	CCTCAGC	1 cut(s)	309
BbvI	GCAGC	3 cut(s)	172, 755, 868
BccI	CCATC	5 cut(s)	215, 518, 640, 680, 1233
BciT130I	CCWGG	4 cut(s)	80, 954, 1144, 1466
BclI	TGATCA	2 cut(s)	1087, 1383
BcnI	CCSGG	2 cut(s)	811, 1410
BcoDI	GTCTC	3 cut(s)	238, 608, 1346
BfaI	CTAG	3 cut(s)	530, 1199, 1433
BfmI	CTRYAG	1 cut(s)	327
BisI	GCNGC	3 cut(s)	161, 744, 882
BlpI	GCTNAGC	1 cut(s)	1155
BlsI	GCNGC	3 cut(s)	162, 745, 883
Bme1390I	CCNGG	6 cut(s)	80, 811, 954, 1144, 1410, 1466
Bme18I	GGWCC	4 cut(s)	295, 768, 773, 950
BmeT110I	CYCGRG	1 cut(s)	663
BmgT120I	GGNCC	5 cut(s)	53, 295, 768, 773, 950
BmiI	GGNNCC	4 cut(s)	456, 642, 816, 1244
BmrFI	CCNGG	6 cut(s)	80, 811, 954, 1144, 1410, 1466
BmsI	GCATC	4 cut(s)	56, 265, 1192, 1347
BpiI	GAAGAC	1 cut(s)	1065
BpmI	CTGGAG	1 cut(s)	62
Bpu10I	CCTNAGC	2 cut(s)	309, 388
Bpu1102I	GCTNAGC	1 cut(s)	1155
Bpu14I	TTCGAA	1 cut(s)	1358
BpuEI	CTTGAG	2 cut(s)	590, 1134
BpuMI	CCSGG	2 cut(s)	811, 1410
BsaI	GGTCTC	1 cut(s)	608
BsaJI	CCNNGG	4 cut(s)	42, 662, 764, 810
BsaWI	WCCGGW	2 cut(s)	297, 770
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	2 cut(s)	464, 770
Bse1I	ACTGG	4 cut(s)	548, 574, 965, 1139
Bse3DI	GCAATG	2 cut(s)	657, 1275
BseAI	TCCGGA	1 cut(s)	297
BseBI	CCWGG	4 cut(s)	80, 954, 1144, 1466
BseDI	CCNNGG	4 cut(s)	42, 662, 764, 810
BseGI	GGATG	8 cut(s)	413, 529, 691, 760, 859, 1188, 1244, 1474
BseLI	CCNNNNNNNGG	2 cut(s)	464, 770
BseMI	GCAATG	2 cut(s)	657, 1275
BseMII	CTCAG	2 cut(s)	300, 1098
BseNI	ACTGG	4 cut(s)	548, 574, 965, 1139
BseRI	GAGGAG	2 cut(s)	148, 809
BseSI	GKGCMC	3 cut(s)	972, 1127, 1264
BseXI	GCAGC	3 cut(s)	172, 755, 868
BsgI	GTGCAG	1 cut(s)	1323
BshFI	GGCC	2 cut(s)	55, 1147
BshNI	GGYRCC	1 cut(s)	814
BsiHKAI	GWGCWC	2 cut(s)	972, 1127
BsiHKCI	CYCGRG	1 cut(s)	663
BsiSI	CCGG	4 cut(s)	298, 771, 810, 1409
BslI	CCNNNNNNNGG	2 cut(s)	464, 770
BsmAI	GTCTC	3 cut(s)	238, 608, 1346
BsnI	GGCC	2 cut(s)	55, 1147
Bso31I	GGTCTC	1 cut(s)	608
BsoBI	CYCGRG	1 cut(s)	663
Bsp119I	TTCGAA	1 cut(s)	1358
Bsp1286I	GDGCHC	3 cut(s)	972, 1127, 1264
Bsp13I	TCCGGA	1 cut(s)	297
Bsp1407I	TGTACA	1 cut(s)	263
Bsp143I	GATC	9 cut(s)	73, 202, 238, 757, 897, 902, 1087, 1383, 1456
Bsp1720I	GCTNAGC	1 cut(s)	1155
BspACI	CCGC	4 cut(s)	26, 1264, 1273, 1371
BspANI	GGCC	2 cut(s)	55, 1147
BspCNI	CTCAG	2 cut(s)	301, 1099
BspEI	TCCGGA	1 cut(s)	297
BspHI	TCATGA	1 cut(s)	918
BspLI	GGNNCC	4 cut(s)	456, 642, 816, 1244
BspPI	GGATC	4 cut(s)	81, 765, 910, 1464
BspQI	GCTCTTC	2 cut(s)	222, 562
BspT104I	TTCGAA	1 cut(s)	1358
BspT107I	GGYRCC	1 cut(s)	814
BspTNI	GGTCTC	1 cut(s)	608
BsrDI	GCAATG	2 cut(s)	657, 1275
BsrGI	TGTACA	1 cut(s)	263
BsrI	ACTGG	4 cut(s)	548, 574, 965, 1139
BssECI	CCNNGG	4 cut(s)	42, 662, 764, 810
BssMI	GATC	9 cut(s)	73, 202, 238, 757, 897, 902, 1087, 1383, 1456
BssSI	CACGAG	1 cut(s)	971
BssT1I	CCWWGG	2 cut(s)	42, 764
Bst2BI	CACGAG	1 cut(s)	971
Bst2UI	CCWGG	4 cut(s)	80, 954, 1144, 1466
Bst4CI	ACNGT	3 cut(s)	91, 100, 1064
Bst6I	CTCTTC	5 cut(s)	43, 222, 433, 562, 601
BstAUI	TGTACA	1 cut(s)	263
BstBI	TTCGAA	1 cut(s)	1358
BstC8I	GCNNGC	4 cut(s)	384, 842, 1026, 1264
BstDEI	CTNAG	5 cut(s)	171, 309, 388, 1107, 1155
BstF5I	GGATG	8 cut(s)	413, 529, 691, 760, 859, 1188, 1244, 1474
BstKTI	GATC	9 cut(s)	76, 205, 241, 760, 900, 905, 1090, 1386, 1459
BstMAI	GTCTC	3 cut(s)	238, 608, 1346
BstMBI	GATC	9 cut(s)	73, 202, 238, 757, 897, 902, 1087, 1383, 1456
BstMWI	GCNNNNNNNGC	3 cut(s)	25, 1144, 1272
BstNI	CCWGG	4 cut(s)	80, 954, 1144, 1466
BstNSI	RCATGY	1 cut(s)	1028
BstSCI	CCNGG	6 cut(s)	78, 809, 952, 1142, 1408, 1464
BstSFI	CTRYAG	1 cut(s)	327
BstSLI	GKGCMC	3 cut(s)	972, 1127, 1264
BstV1I	GCAGC	3 cut(s)	172, 755, 868
BstV2I	GAAGAC	1 cut(s)	1065
BstX2I	RGATCY	1 cut(s)	73
BstXI	CCANNNNNNTGG	1 cut(s)	829
BstYI	RGATCY	1 cut(s)	73
BsuRI	GGCC	2 cut(s)	55, 1147
BtsCI	GGATG	8 cut(s)	413, 529, 691, 760, 859, 1188, 1244, 1474
BtsIMutI	CAGTG	1 cut(s)	972
Cac8I	GCNNGC	4 cut(s)	384, 842, 1026, 1264
CaiI	CAGNNNCTG	1 cut(s)	247
CciI	TCATGA	1 cut(s)	918
Cfr13I	GGNCC	5 cut(s)	53, 295, 768, 773, 950
Csp6I	GTAC	5 cut(s)	138, 264, 708, 780, 977
CviQI	GTAC	5 cut(s)	138, 264, 708, 780, 977
DdeI	CTNAG	5 cut(s)	171, 309, 388, 1107, 1155
DpnI	GATC	9 cut(s)	75, 204, 240, 759, 899, 904, 1089, 1385, 1458
DpnII	GATC	9 cut(s)	73, 202, 238, 757, 897, 902, 1087, 1383, 1456
DraI	TTTAAA	1 cut(s)	363
Eam1104I	CTCTTC	5 cut(s)	43, 222, 433, 562, 601
EarI	CTCTTC	5 cut(s)	43, 222, 433, 562, 601
Eco130I	CCWWGG	2 cut(s)	42, 764
Eco31I	GGTCTC	1 cut(s)	608
Eco47I	GGWCC	4 cut(s)	295, 768, 773, 950
Eco57I	CTGAAG	2 cut(s)	176, 893
Eco88I	CYCGRG	1 cut(s)	663
EcoRII	CCWGG	4 cut(s)	78, 952, 1142, 1464
EcoT14I	CCWWGG	2 cut(s)	42, 764
ErhI	CCWWGG	2 cut(s)	42, 764
FalI	AAGNNNNNCTT	4 cut(s)	371, 403, 1408, 1440
FauI	CCCGC	2 cut(s)	1271, 1378
FbaI	TGATCA	2 cut(s)	1087, 1383
Fnu4HI	GCNGC	3 cut(s)	161, 744, 882
FokI	GGATG	7 cut(s)	420, 536, 698, 747, 846, 1175, 1251
Fsp4HI	GCNGC	3 cut(s)	161, 744, 882
FspBI	CTAG	3 cut(s)	530, 1199, 1433
GluI	GCNGC	3 cut(s)	161, 744, 882
GsuI	CTGGAG	1 cut(s)	62
HaeIII	GGCC	2 cut(s)	55, 1147
HapII	CCGG	4 cut(s)	298, 771, 810, 1409
HindIII	AAGCTT	3 cut(s)	65, 414, 1422
HinfI	GANTC	7 cut(s)	11, 347, 593, 875, 1175, 1314, 1436
HpaII	CCGG	4 cut(s)	298, 771, 810, 1409
HphI	GGTGA	2 cut(s)	236, 701
Hpy166II	GTNNAC	2 cut(s)	970, 1125
Hpy188III	TCNNGA	7 cut(s)	206, 298, 344, 473, 863, 919, 1433
Hpy8I	GTNNAC	2 cut(s)	970, 1125
Hpy99I	CGWCG	1 cut(s)	638
HpyAV	CCTTC	6 cut(s)	175, 328, 686, 716, 793, 860
HpyCH4III	ACNGT	3 cut(s)	91, 100, 1064
HpyCH4V	TGCA	7 cut(s)	743, 844, 970, 1016, 1125, 1205, 1304
HpyF10VI	GCNNNNNNNGC	3 cut(s)	25, 1144, 1272
HpyF3I	CTNAG	5 cut(s)	171, 309, 388, 1107, 1155
Kpn2I	TCCGGA	1 cut(s)	297
Ksp22I	TGATCA	2 cut(s)	1087, 1383
Kzo9I	GATC	9 cut(s)	73, 202, 238, 757, 897, 902, 1087, 1383, 1456
LguI	GCTCTTC	2 cut(s)	222, 562
LmnI	GCTCC	1 cut(s)	317
Lsp1109I	GCAGC	3 cut(s)	172, 755, 868
LweI	GCATC	4 cut(s)	56, 265, 1192, 1347
MaeI	CTAG	3 cut(s)	530, 1199, 1433
MaeIII	GTNAC	1 cut(s)	269
MalI	GATC	9 cut(s)	75, 204, 240, 759, 899, 904, 1089, 1385, 1458
MboI	GATC	9 cut(s)	73, 202, 238, 757, 897, 902, 1087, 1383, 1456
MfeI	CAATTG	1 cut(s)	432
MflI	RGATCY	1 cut(s)	73
MhlI	GDGCHC	3 cut(s)	972, 1127, 1264
MluCI	AATT	8 cut(s)	364, 399, 432, 462, 482, 825, 984, 1111
MlyI	GAGTC	3 cut(s)	356, 587, 1308
MmeI	TCCRAC	2 cut(s)	295, 697
MroI	TCCGGA	1 cut(s)	297
MroXI	GAANNNNTTC	2 cut(s)	67, 803
MseI	TTAA	8 cut(s)	252, 362, 498, 624, 855, 1226, 1389, 1477
MslI	CAYNNNNRTG	4 cut(s)	827, 1040, 1255, 1467
MspI	CCGG	4 cut(s)	298, 771, 810, 1409
MspR9I	CCNGG	6 cut(s)	80, 811, 954, 1144, 1410, 1466
MunI	CAATTG	1 cut(s)	432
MvaI	CCWGG	4 cut(s)	80, 954, 1144, 1466
MwoI	GCNNNNNNNGC	3 cut(s)	25, 1144, 1272
NciI	CCSGG	2 cut(s)	811, 1410
NdeII	GATC	9 cut(s)	73, 202, 238, 757, 897, 902, 1087, 1383, 1456
NlaIV	GGNNCC	4 cut(s)	456, 642, 816, 1244
NspI	RCATGY	1 cut(s)	1028
NspV	TTCGAA	1 cut(s)	1358
PaeI	GCATGC	1 cut(s)	1028
PagI	TCATGA	1 cut(s)	918
PciSI	GCTCTTC	2 cut(s)	222, 562
PdmI	GAANNNNTTC	2 cut(s)	67, 803
PfeI	GAWTC	4 cut(s)	11, 875, 1175, 1436
PflFI	GACNNNGTC	1 cut(s)	676
PfoI	TCCNGGA	1 cut(s)	1408
PkrI	GCNGC	3 cut(s)	162, 745, 883
PleI	GAGTC	3 cut(s)	355, 587, 1308
PpsI	GAGTC	3 cut(s)	355, 587, 1308
PshBI	ATTAAT	1 cut(s)	252
Psp6I	CCWGG	4 cut(s)	78, 952, 1142, 1464
PspGI	CCWGG	4 cut(s)	78, 952, 1142, 1464
PspN4I	GGNNCC	4 cut(s)	456, 642, 816, 1244
PspPI	GGNCC	5 cut(s)	53, 295, 768, 773, 950
PstNI	CAGNNNCTG	1 cut(s)	247
PsuI	RGATCY	1 cut(s)	73
PsyI	GACNNNGTC	1 cut(s)	676
RsaI	GTAC	5 cut(s)	139, 265, 709, 781, 978
RsaNI	GTAC	5 cut(s)	138, 264, 708, 780, 977
RseI	CAYNNNNRTG	4 cut(s)	827, 1040, 1255, 1467
SapI	GCTCTTC	2 cut(s)	222, 562
SaqAI	TTAA	8 cut(s)	252, 362, 498, 624, 855, 1226, 1389, 1477
SatI	GCNGC	3 cut(s)	161, 744, 882
Sau3AI	GATC	9 cut(s)	73, 202, 238, 757, 897, 902, 1087, 1383, 1456
Sau96I	GGNCC	5 cut(s)	53, 295, 768, 773, 950
SchI	GAGTC	3 cut(s)	356, 587, 1308
ScrFI	CCNGG	6 cut(s)	80, 811, 954, 1144, 1410, 1466
SduI	GDGCHC	3 cut(s)	972, 1127, 1264
SfaNI	GCATC	4 cut(s)	56, 265, 1192, 1347
SfcI	CTRYAG	1 cut(s)	327
SfuI	TTCGAA	1 cut(s)	1358
SinI	GGWCC	4 cut(s)	295, 768, 773, 950
SmiMI	CAYNNNNRTG	4 cut(s)	827, 1040, 1255, 1467
SmlI	CTYRAG	2 cut(s)	605, 1149
SmoI	CTYRAG	2 cut(s)	605, 1149
SphI	GCATGC	1 cut(s)	1028
Sse9I	AATT	8 cut(s)	364, 399, 432, 462, 482, 825, 984, 1111
SsiI	CCGC	4 cut(s)	26, 1264, 1273, 1371
SspMI	CTAG	3 cut(s)	530, 1199, 1433
StyD4I	CCNGG	6 cut(s)	78, 809, 952, 1142, 1408, 1464
StyI	CCWWGG	2 cut(s)	42, 764
TaaI	ACNGT	3 cut(s)	91, 100, 1064
TaqI	TCGA	6 cut(s)	198, 633, 1131, 1358, 1377, 1459
TasI	AATT	8 cut(s)	364, 399, 432, 462, 482, 825, 984, 1111
TatI	WGTACW	1 cut(s)	263
TfiI	GAWTC	4 cut(s)	11, 875, 1175, 1436
Tru1I	TTAA	8 cut(s)	252, 362, 498, 624, 855, 1226, 1389, 1477
Tru9I	TTAA	8 cut(s)	252, 362, 498, 624, 855, 1226, 1389, 1477
TscAI	CASTG	1 cut(s)	972
TseI	GCWGC	3 cut(s)	160, 743, 881
TspDTI	ATGAA	7 cut(s)	275, 574, 668, 907, 908, 935, 1416
TspRI	CASTG	1 cut(s)	972
Tth111I	GACNNNGTC	1 cut(s)	676
VneI	GTGCAC	2 cut(s)	968, 1123
VpaK11BI	GGWCC	4 cut(s)	295, 768, 773, 950
VspI	ATTAAT	1 cut(s)	252
XapI	RAATTY	4 cut(s)	364, 482, 984, 1111
XbaI	TCTAGA	1 cut(s)	1432
XceI	RCATGY	1 cut(s)	1028
XcmI	CCANNNNNNNNNTGG	1 cut(s)	400
XmnI	GAANNNNTTC	2 cut(s)	67, 803
XspI	CTAG	3 cut(s)	530, 1199, 1433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.