Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002728

Physical Location & Seq

Genomic Coordinates Forward (+)

52438333 .. 52441062

Gene Structure 2730 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0423900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGAGCTGGCTCAGGAGAATCGACCTCATCGAGCCCTACTACTACTGCCCCCCGCCGCCGGCGGTTCTCGTCCGCGAGACCTCCATTTTCGCCGCCGCGCCGAAACTCCCTTCGTTTTTCGAAGAGCTGGTGGAGGAGGATTTCGAGCTCGGATACGCATTGGACCTGCTGTGCCCTAGCCCCGTCAAAGCGCCGTCGCTTTTGTCCTACAAGCTGATTCAGCGGGTGGAGAGGCTCGGAGGCGAGCTCTACTTGCAGAGCCTGAGCGACCGAGTCACTGAGCTGGAGTCGCGATTCGATCGCCTCGCGAAGATCAAGGCCGCTGCCGTCGCCGGCCTTGGCGATCGGAAGTACACGTACACGGCGGAGATCAAGGCGCCGGAGAAGAAGTACATGTGGACGACGGAGATCAAGGAGGGGAAGCATAAGAAGAGTGAGAGGAAGTACAAGTGGACGGCGGAGGTTGAAGGCAAGGGAGAGATCTCGAGGAAGTACACGTTTACTGCTTCGAGTGGCGATGCAGAGGATCACAGTGAGAAGAAGGAGAAGGAGAAGAAGAAGAAGCATCATAAGGTGAAGAAGGAAGAGAGTGGCTCTCGTGTGGTGGAGATTGAAGAGCTTGCAGCTGATCATGGGGCTGTGGTTCTAAGACAGGCTTTTGCTAAGAGAACTGGAGGTAGTAAAATTGCTAAGGGGAAGAACAAGGAACTGTCTCCTCAGGATGCAGCCATGATGATACAAGGGAATTTCAGAGCTTATCTGATCCGTAGATCACAGGCTCTTCGGGCCCTTAGAGACCTGGCTGTTGCCAAGTCCAAGCTGAAGGAGCTGAGGGCATTGTTTAATAACTTCTCTTACCGCCGCCGTGTAGCCCATGATACAGCTGAGCGTCAAAGGTTCACTGAAAAGATAATTGTTCTGCTCCTCACTGTGGATGCCATTGAGGGTGCTGATGTAATGGTGCGATCTGCAAAGAGGTCGATGGTGGATGAGCTGGAAGCTATGCTTGAAGTGGTTGACCCCCAACCAGCTGGACAATCATTGTCCATGAGGAGGAGGACCTTTGATATGCCAGATGGTGTCATTCAAAGGGAGATTGCTGAAGGTGTGGCACAGGTTGTCCAAATGCTTGATCGTGAAGAGAACAGTTCTACCTTTGAGGCATGTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005777 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008289 GO:0009719 GO:0009725 GO:0009737 GO:0009909 GO:0009987 GO:0010033 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0033993 GO:0035091 GO:0042221 GO:0042579 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0097305 GO:1901700 GO:1902074 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko03320 map03320

Pfam Domains

Protein Families

PI3_PI4_kinase ubiquitin

Protein Analysis

390

Amino Acids

44.32

Weight (kDa)

9.15

Isoelectric Point (pI)

58.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24240 AT5G24240
fragaria_vesca	FvH4_5g04790 FvH4_7g31640 FvH4_7g31640
malus_domestica	MD06G1109000.v1.1 MD14G1129900.v1.1
prunus_persica	Prupe.2G310500_v2.0.a1 Prupe.2G310500_v2.0.a1 Prupe.5G121800_v2.0.a1
pyrus_communis	pycom06g10230
rosa_chinensis	RchiOBHm_Chr1g0380721 RchiOBHm_Chr7g0194461
rosa_laevigata	RLG00000004199 RLG00000026274
rosa_multiflora	Rmu_co8342205.1_g000001 Rmu_co8403341.1_g000001 Rmu_sc0001637.1_g000011 Rmu_sc0006267.1_g000003 Rmu_sc0034746.1_g000002 Rmu_ssc0000261.1_g000026
rosa_roxburghii	Rroxscaffold_3G00261340 Rroxscaffold_4G00279080
rosa_rugosa	Rorug01G0423900 Rorug07G0015800
rosa_samantha	Rh1AG448000 Rh1BG401100 Rh1BG403500 Rh1CG415500 Rh1CG417800 Rh1DG431300 Rh1DG433800 Rh7AG143100 Rh7BG143600 Rh7CG147400 Rh7DG145000
rosa_wichuraiana	Rw0G005880 Rw1G039000 Rw7G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	174
AccB1I	GGYRCC	1 cut(s)	376
AccII	CGCG	4 cut(s)	75, 98, 292, 308
AclWI	GGATC	2 cut(s)	534, 757
AcsI	RAATTY	1 cut(s)	745
AcuI	CTGAAG	2 cut(s)	842, 1122
AcyI	GRCGYC	1 cut(s)	377
AfaI	GTAC	5 cut(s)	353, 359, 392, 446, 494
AfiI	CCNNNNNNNGG	3 cut(s)	58, 931, 1053
AflIII	ACRYGT	3 cut(s)	354, 393, 495
AgsI	TTSAA	4 cut(s)	467, 614, 1010, 1088
AjnI	CCWGG	1 cut(s)	798
Alw21I	GWGCWC	2 cut(s)	150, 249
Alw26I	GTCTC	3 cut(s)	71, 717, 789
AlwI	GGATC	2 cut(s)	534, 757
AlwNI	CAGNNNCTG	1 cut(s)	262
Ama87I	CYCGRG	1 cut(s)	484
AoxI	GGCC	3 cut(s)	318, 334, 786
ApaI	GGGCCC	1 cut(s)	790
ApeKI	GCWGC	3 cut(s)	323, 623, 725
ApoI	RAATTY	1 cut(s)	745
AspLEI	GCGC	3 cut(s)	100, 193, 379
AspS9I	GGNCC	4 cut(s)	163, 786, 787, 1059
AsuHPI	GGTGA	1 cut(s)	586
AsuII	TTCGAA	1 cut(s)	120
AvaI	CYCGRG	1 cut(s)	484
AvaII	GGWCC	2 cut(s)	163, 1059
AxyI	CCTNAGG	1 cut(s)	717
BaeGI	GKGCMC	2 cut(s)	176, 790
BanI	GGYRCC	1 cut(s)	376
BanII	GRGCYC	4 cut(s)	36, 150, 249, 790
BarI	GAAGNNNNNNTAC	2 cut(s)	341, 373
BauI	CACGAG	1 cut(s)	597
Bbv12I	GWGCWC	2 cut(s)	150, 249
BbvCI	CCTCAGC	1 cut(s)	830
BbvI	GCAGC	3 cut(s)	310, 635, 737
BccI	CCATC	2 cut(s)	976, 1070
BceAI	ACGGC	5 cut(s)	178, 311, 378, 471, 849
BcgI	CGANNNNNNTGC	2 cut(s)	960, 994
BciT130I	CCWGG	1 cut(s)	800
BciVI	GTATCC	1 cut(s)	146
BclI	TGATCA	1 cut(s)	628
BcoDI	GTCTC	3 cut(s)	71, 717, 789
BfaI	CTAG	1 cut(s)	177
BfoI	RGCGCY	2 cut(s)	194, 380
BfuAI	ACCTGC	1 cut(s)	174
BfuI	GTATCC	1 cut(s)	146
BglII	AGATCT	1 cut(s)	480
BisI	GCNGC	8 cut(s)	56, 93, 96, 321, 324, 624, 726, 862
BlpI	GCTNAGC	1 cut(s)	885
BlsI	GCNGC	8 cut(s)	57, 94, 97, 322, 325, 625, 727, 863
Bme1390I	CCNGG	1 cut(s)	800
Bme18I	GGWCC	2 cut(s)	163, 1059
BmeT110I	CYCGRG	1 cut(s)	484
BmgT120I	GGNCC	4 cut(s)	163, 786, 787, 1059
BmiI	GGNNCC	2 cut(s)	378, 788
BmrFI	CCNGG	1 cut(s)	800
BmsI	GCATC	4 cut(s)	508, 574, 712, 925
BplI	GAGNNNNNCTC	6 cut(s)	231, 263, 578, 610, 580, 612
BpmI	CTGGAG	2 cut(s)	305, 693
Bpu10I	CCTNAGC	4 cut(s)	11, 263, 690, 830
Bpu1102I	GCTNAGC	1 cut(s)	885
Bpu14I	TTCGAA	1 cut(s)	120
BsaAI	YACGTR	1 cut(s)	357
BsaHI	GRCGYC	1 cut(s)	377
BsaI	GGTCTC	2 cut(s)	71, 789
BsaJI	CCNNGG	1 cut(s)	337
BsaXI	ACNNNNNCTCC	2 cut(s)	374, 404
Bsc4I	CCNNNNNNNGG	3 cut(s)	58, 931, 1053
Bse118I	RCCGGY	2 cut(s)	58, 332
Bse1I	ACTGG	1 cut(s)	676
Bse21I	CCTNAGG	1 cut(s)	717
BseBI	CCWGG	1 cut(s)	800
BseDI	CCNNGG	1 cut(s)	337
BseGI	GGATG	3 cut(s)	727, 940, 994
BseLI	CCNNNNNNNGG	3 cut(s)	58, 931, 1053
BseMII	CTCAG	6 cut(s)	25, 254, 270, 731, 821, 876
BseNI	ACTGG	1 cut(s)	676
BseRI	GAGGAG	5 cut(s)	149, 705, 914, 1066, 1069
BseSI	GKGCMC	2 cut(s)	176, 790
BseXI	GCAGC	3 cut(s)	310, 635, 737
Bsh1236I	CGCG	4 cut(s)	75, 98, 292, 308
Bsh1285I	CGRYCG	3 cut(s)	271, 301, 346
BshFI	GGCC	3 cut(s)	320, 336, 788
BshNI	GGYRCC	1 cut(s)	376
BsiEI	CGRYCG	3 cut(s)	271, 301, 346
BsiHKAI	GWGCWC	2 cut(s)	150, 249
BsiHKCI	CYCGRG	1 cut(s)	484
BsiSI	CCGG	3 cut(s)	59, 333, 380
BslI	CCNNNNNNNGG	3 cut(s)	58, 931, 1053
BsmAI	GTCTC	3 cut(s)	71, 717, 789
BsnI	GGCC	3 cut(s)	320, 336, 788
Bso31I	GGTCTC	2 cut(s)	71, 789
BsoBI	CYCGRG	1 cut(s)	484
Bsp119I	TTCGAA	1 cut(s)	120
Bsp120I	GGGCCC	1 cut(s)	786
Bsp1286I	GDGCHC	5 cut(s)	36, 150, 176, 249, 790
Bsp1720I	GCTNAGC	1 cut(s)	885
Bsp68I	TCGCGA	2 cut(s)	292, 308
BspANI	GGCC	3 cut(s)	320, 336, 788
BspCNI	CTCAG	6 cut(s)	24, 255, 271, 730, 822, 877
BspFNI	CGCG	4 cut(s)	75, 98, 292, 308
BspLI	GGNNCC	2 cut(s)	378, 788
BspMI	ACCTGC	1 cut(s)	174
BspPI	GGATC	2 cut(s)	534, 757
BspQI	GCTCTTC	3 cut(s)	117, 609, 786
BspT104I	TTCGAA	1 cut(s)	120
BspT107I	GGYRCC	1 cut(s)	376
BspTNI	GGTCTC	2 cut(s)	71, 789
BsrFI	RCCGGY	2 cut(s)	58, 332
BsrI	ACTGG	1 cut(s)	676
BssAI	RCCGGY	2 cut(s)	58, 332
BssECI	CCNNGG	1 cut(s)	337
BssNI	GRCGYC	1 cut(s)	377
BssSI	CACGAG	1 cut(s)	597
BssT1I	CCWWGG	1 cut(s)	337
Bst2BI	CACGAG	1 cut(s)	597
Bst2UI	CCWGG	1 cut(s)	800
Bst4CI	ACNGT	4 cut(s)	533, 711, 931, 1148
Bst6I	CTCTTC	6 cut(s)	117, 425, 579, 609, 786, 1134
BstACI	GRCGYC	1 cut(s)	377
BstBAI	YACGTR	1 cut(s)	357
BstBI	TTCGAA	1 cut(s)	120
BstC8I	GCNNGC	5 cut(s)	8, 60, 245, 334, 621
BstF5I	GGATG	3 cut(s)	727, 940, 994
BstFNI	CGCG	4 cut(s)	75, 98, 292, 308
BstH2I	RGCGCY	2 cut(s)	194, 380
BstHHI	GCGC	3 cut(s)	100, 193, 379
BstMAI	GTCTC	3 cut(s)	71, 717, 789
BstMCI	CGRYCG	3 cut(s)	271, 301, 346
BstMWI	GCNNNNNNNGC	6 cut(s)	220, 253, 289, 329, 785, 826
BstNI	CCWGG	1 cut(s)	800
BstNSI	RCATGY	2 cut(s)	397, 1167
BstSCI	CCNGG	1 cut(s)	798
BstSLI	GKGCMC	2 cut(s)	176, 790
BstUI	CGCG	4 cut(s)	75, 98, 292, 308
BstV1I	GCAGC	3 cut(s)	310, 635, 737
BstX2I	RGATCY	1 cut(s)	480
BstXI	CCANNNNNNTGG	1 cut(s)	1031
BstYI	RGATCY	1 cut(s)	480
Bsu36I	CCTNAGG	1 cut(s)	717
BsuI	GTATCC	1 cut(s)	146
BsuRI	GGCC	3 cut(s)	320, 336, 788
BtgZI	GCGATG	1 cut(s)	531
BtsCI	GGATG	3 cut(s)	727, 940, 994
BtsIMutI	CAGTG	4 cut(s)	276, 538, 900, 927
BtuMI	TCGCGA	2 cut(s)	292, 308
BveI	ACCTGC	1 cut(s)	174
Cac8I	GCNNGC	5 cut(s)	8, 60, 245, 334, 621
CaiI	CAGNNNCTG	1 cut(s)	262
CfoI	GCGC	3 cut(s)	100, 193, 379
Cfr10I	RCCGGY	2 cut(s)	58, 332
Cfr13I	GGNCC	4 cut(s)	163, 786, 787, 1059
CseI	GACGC	1 cut(s)	878
Csp6I	GTAC	5 cut(s)	352, 358, 391, 445, 493
CviAII	CATG	6 cut(s)	394, 632, 730, 875, 1048, 1164
CviQI	GTAC	5 cut(s)	352, 358, 391, 445, 493
DinI	GGCGCC	1 cut(s)	378
Eam1104I	CTCTTC	6 cut(s)	117, 425, 579, 609, 786, 1134
EarI	CTCTTC	6 cut(s)	117, 425, 579, 609, 786, 1134
EciI	GGCGGA	2 cut(s)	380, 473
Ecl136II	GAGCTC	2 cut(s)	148, 247
Eco130I	CCWWGG	1 cut(s)	337
Eco24I	GRGCYC	4 cut(s)	36, 150, 249, 790
Eco31I	GGTCTC	2 cut(s)	71, 789
Eco47I	GGWCC	2 cut(s)	163, 1059
Eco53kI	GAGCTC	2 cut(s)	148, 247
Eco57I	CTGAAG	2 cut(s)	842, 1122
Eco81I	CCTNAGG	1 cut(s)	717
Eco88I	CYCGRG	1 cut(s)	484
EcoICRI	GAGCTC	2 cut(s)	148, 247
EcoO109I	RGGNCCY	2 cut(s)	787, 1059
EcoRII	CCWGG	1 cut(s)	798
EcoT14I	CCWWGG	1 cut(s)	337
EcoT38I	GRGCYC	4 cut(s)	36, 150, 249, 790
EgeI	GGCGCC	1 cut(s)	378
EheI	GGCGCC	1 cut(s)	378
ErhI	CCWWGG	1 cut(s)	337
FaeI	CATG	6 cut(s)	397, 635, 733, 878, 1051, 1167
FalI	AAGNNNNNCTT	4 cut(s)	640, 672, 990, 1022
FatI	CATG	6 cut(s)	393, 631, 729, 874, 1047, 1163
FauI	CCCGC	2 cut(s)	60, 216
FbaI	TGATCA	1 cut(s)	628
Fnu4HI	GCNGC	8 cut(s)	56, 93, 96, 321, 324, 624, 726, 862
FokI	GGATG	3 cut(s)	734, 947, 1001
FriOI	GRGCYC	4 cut(s)	36, 150, 249, 790
Fsp4HI	GCNGC	8 cut(s)	56, 93, 96, 321, 324, 624, 726, 862
FspBI	CTAG	1 cut(s)	177
GlaI	GCGC	3 cut(s)	99, 192, 378
GluI	GCNGC	8 cut(s)	56, 93, 96, 321, 324, 624, 726, 862
GsuI	CTGGAG	2 cut(s)	305, 693
HaeII	RGCGCY	2 cut(s)	194, 380
HaeIII	GGCC	3 cut(s)	320, 336, 788
HapII	CCGG	3 cut(s)	59, 333, 380
HgaI	GACGC	1 cut(s)	878
HhaI	GCGC	3 cut(s)	100, 193, 379
Hin1I	GRCGYC	1 cut(s)	377
Hin1II	CATG	6 cut(s)	397, 635, 733, 878, 1051, 1167
Hin6I	GCGC	3 cut(s)	98, 191, 377
HinP1I	GCGC	3 cut(s)	98, 191, 377
HincII	GTYRAC	1 cut(s)	1018
HindII	GTYRAC	1 cut(s)	1018
HinfI	GANTC	5 cut(s)	18, 217, 273, 287, 294
HpaII	CCGG	3 cut(s)	59, 333, 380
HphI	GGTGA	1 cut(s)	586
Hpy166II	GTNNAC	8 cut(s)	354, 360, 399, 453, 495, 501, 900, 1018
Hpy188I	TCNGA	5 cut(s)	152, 239, 348, 752, 762
Hpy188III	TCNNGA	6 cut(s)	13, 291, 307, 484, 719, 1136
Hpy8I	GTNNAC	8 cut(s)	354, 360, 399, 453, 495, 501, 900, 1018
Hpy99I	CGWCG	3 cut(s)	199, 332, 406
HpyAV	CCTTC	7 cut(s)	120, 461, 535, 541, 574, 817, 1097
HpyCH4III	ACNGT	4 cut(s)	533, 711, 931, 1148
HpyCH4IV	ACGT	2 cut(s)	356, 497
HpyCH4V	TGCA	5 cut(s)	256, 521, 623, 725, 971
HpyF10VI	GCNNNNNNNGC	6 cut(s)	220, 253, 289, 329, 785, 826
HpySE526I	ACGT	2 cut(s)	356, 497
Hsp92I	GRCGYC	1 cut(s)	377
Hsp92II	CATG	6 cut(s)	397, 635, 733, 878, 1051, 1167
HspAI	GCGC	3 cut(s)	98, 191, 377
KasI	GGCGCC	1 cut(s)	376
KroI	GCCGGC	2 cut(s)	58, 332
KroNI	GCCGGC	2 cut(s)	60, 334
Ksp22I	TGATCA	1 cut(s)	628
LguI	GCTCTTC	3 cut(s)	117, 609, 786
LmnI	GCTCC	2 cut(s)	826, 927
Lsp1109I	GCAGC	3 cut(s)	310, 635, 737
LweI	GCATC	4 cut(s)	508, 574, 712, 925
MaeI	CTAG	1 cut(s)	177
MaeII	ACGT	2 cut(s)	356, 497
MaeIII	GTNAC	1 cut(s)	274
MflI	RGATCY	1 cut(s)	480
MhlI	GDGCHC	5 cut(s)	36, 150, 176, 249, 790
MluCI	AATT	3 cut(s)	684, 745, 912
Mly113I	GGCGCC	1 cut(s)	377
MlyI	GAGTC	2 cut(s)	282, 296
MreI	CGCCGGCG	1 cut(s)	58
MroNI	GCCGGC	2 cut(s)	58, 332
MseI	TTAA	1 cut(s)	843
MslI	CAYNNNNRTG	1 cut(s)	1168
MspA1I	CMGCKG	5 cut(s)	223, 323, 626, 884, 1031
MspI	CCGG	3 cut(s)	59, 333, 380
MspR9I	CCNGG	1 cut(s)	800
MvaI	CCWGG	1 cut(s)	800
MvnI	CGCG	4 cut(s)	75, 98, 292, 308
MwoI	GCNNNNNNNGC	6 cut(s)	220, 253, 289, 329, 785, 826
NaeI	GCCGGC	2 cut(s)	60, 334
NarI	GGCGCC	1 cut(s)	377
NgoMIV	GCCGGC	2 cut(s)	58, 332
NlaIII	CATG	6 cut(s)	397, 635, 733, 878, 1051, 1167
NlaIV	GGNNCC	2 cut(s)	378, 788
NmuCI	GTSAC	1 cut(s)	274
NruI	TCGCGA	2 cut(s)	292, 308
NspI	RCATGY	2 cut(s)	397, 1167
NspV	TTCGAA	1 cut(s)	120
PaeR7I	CTCGAG	1 cut(s)	484
PciI	ACATGT	1 cut(s)	393
PciSI	GCTCTTC	3 cut(s)	117, 609, 786
PcsI	WCGNNNNNNNCGW	1 cut(s)	27
PdiI	GCCGGC	2 cut(s)	60, 334
PfeI	GAWTC	3 cut(s)	18, 217, 294
PflFI	GACNNNGTC	1 cut(s)	272
PkrI	GCNGC	8 cut(s)	57, 94, 97, 322, 325, 625, 727, 863
Ple19I	CGATCG	2 cut(s)	301, 346
PleI	GAGTC	2 cut(s)	281, 295
PluTI	GGCGCC	1 cut(s)	380
PpsI	GAGTC	2 cut(s)	281, 295
Ppu21I	YACGTR	1 cut(s)	357
PpuMI	RGGWCCY	1 cut(s)	1059
PscI	ACATGT	1 cut(s)	393
Psp124BI	GAGCTC	2 cut(s)	150, 249
Psp5II	RGGWCCY	1 cut(s)	1059
Psp6I	CCWGG	1 cut(s)	798
PspGI	CCWGG	1 cut(s)	798
PspN4I	GGNNCC	2 cut(s)	378, 788
PspOMI	GGGCCC	1 cut(s)	786
PspPI	GGNCC	4 cut(s)	163, 786, 787, 1059
PspPPI	RGGWCCY	1 cut(s)	1059
PstNI	CAGNNNCTG	1 cut(s)	262
PsuI	RGATCY	1 cut(s)	480
PsyI	GACNNNGTC	1 cut(s)	272
PvuI	CGATCG	2 cut(s)	301, 346
PvuII	CAGCTG	3 cut(s)	626, 884, 1031
RruI	TCGCGA	2 cut(s)	292, 308
RsaI	GTAC	5 cut(s)	353, 359, 392, 446, 494
RsaNI	GTAC	5 cut(s)	352, 358, 391, 445, 493
RseI	CAYNNNNRTG	1 cut(s)	1168
SacI	GAGCTC	2 cut(s)	150, 249
SapI	GCTCTTC	3 cut(s)	117, 609, 786
SaqAI	TTAA	1 cut(s)	843
SatI	GCNGC	8 cut(s)	56, 93, 96, 321, 324, 624, 726, 862
Sau96I	GGNCC	4 cut(s)	163, 786, 787, 1059
SchI	GAGTC	2 cut(s)	282, 296
ScrFI	CCNGG	1 cut(s)	800
SduI	GDGCHC	5 cut(s)	36, 150, 176, 249, 790
SfaNI	GCATC	4 cut(s)	508, 574, 712, 925
SfoI	GGCGCC	1 cut(s)	378
Sfr274I	CTCGAG	1 cut(s)	484
SfuI	TTCGAA	1 cut(s)	120
SgrAI	CRCCGGYG	1 cut(s)	58
SinI	GGWCC	2 cut(s)	163, 1059
SlaI	CTCGAG	1 cut(s)	484
SmiMI	CAYNNNNRTG	1 cut(s)	1168
SmlI	CTYRAG	1 cut(s)	484
SmoI	CTYRAG	1 cut(s)	484
Sse9I	AATT	3 cut(s)	684, 745, 912
SspDI	GGCGCC	1 cut(s)	376
SspMI	CTAG	1 cut(s)	177
SstI	GAGCTC	2 cut(s)	150, 249
StyD4I	CCNGG	1 cut(s)	798
StyI	CCWWGG	1 cut(s)	337
TaaI	ACNGT	4 cut(s)	533, 711, 931, 1148
TaiI	ACGT	2 cut(s)	359, 500
TaqI	TCGA	8 cut(s)	21, 30, 120, 144, 297, 485, 509, 980
TaqII	GACCGA	1 cut(s)	285
TasI	AATT	3 cut(s)	684, 745, 912
TatI	WGTACW	4 cut(s)	351, 390, 444, 492
TauI	GCSGC	5 cut(s)	58, 95, 98, 323, 864
TfiI	GAWTC	3 cut(s)	18, 217, 294
Tru1I	TTAA	1 cut(s)	843
Tru9I	TTAA	1 cut(s)	843
TscAI	CASTG	4 cut(s)	283, 538, 907, 934
TseFI	GTSAC	1 cut(s)	274
TseI	GCWGC	3 cut(s)	323, 623, 725
Tsp45I	GTSAC	1 cut(s)	274
TspGWI	ACGGA	2 cut(s)	419, 755
TspRI	CASTG	4 cut(s)	283, 538, 907, 934
Tth111I	GACNNNGTC	1 cut(s)	272
VpaK11BI	GGWCC	2 cut(s)	163, 1059
XapI	RAATTY	1 cut(s)	745
XceI	RCATGY	2 cut(s)	397, 1167
XhoI	CTCGAG	1 cut(s)	484
XspI	CTAG	1 cut(s)	177

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.