Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002728

Physical Location & Seq

Genomic Coordinates Forward (+)

1234708 .. 1242782

Gene Structure 8075 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0015800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGGGAGTGGAGCAACCTTGGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGTACCTCTTCCTCTTCCAAACCTATTAATCCTGCTACTAGTACTAACACTAATCCATACCCGAATTCTAATCCGAATAATAACAACCATGATTATAATGCGAGCGATTTAAGCGCGCAATCGTCCGCTGGTCTCCAAAAAGAGGAGGACGACCATCTTCTTCAGTTTCAGATTGAGGACGAGTTCGACATTTCTGGTTTGAAGCTCATCCAAGTTCCCAAGCGGGCCCACCACTTCAGAGCTACCCATAATCCACCACCACCACCACCCATTATGGAAAAGAAGAGCAATCTAGAGTCAGAATTCTTCACAGAATATGGAGAGGCAAGCCGGTACCAAGTTCAGGAGGTCATTGGGAAAGGAAGTTATGGTGTTGTGGGTTCTGCGGTTGACACCCACACTGGAGAAAAGGTTGCAATCAAGAAGATTAATGATGTGTTTGAGCATGTCTCAGATGCTACAAGGATCCTGAGAGAAATCAAGCTTCTTCGTTTGCTTCGTCATCCTGATATTGTTGAAATAAAGCACATTATGCTTCCTCCTTCACGACGAGAGTTCAGAGATATCTATGTTGTGTTTGAGTTGATGGAATCAGACCTCCACCAGGTTATCAAGGCAAATGATGATCTTACCCCTGAGCATTATCAGTTTTTCCTGTACCAGCTTCTTCGTGGTTTAAAGTATATTCATACAGCAAATGTATTTCATCGAGATTTAAAGCCAAAAAATATCCTTGCGAATGCTGACTGCAAATTAAAGATATGTGACTTTGGGCTTGCTCGAGTATCTTTCAATGATGCCCCATCTGCTATTTTTTGGACTGATTATGTTGCAACTCGATGGTACCGAGCCCCTGAACTTTGTGGCTCATTTTTCTCAAAATATACTCCTGCAATTGATATCTGGAGCATAGGATGCATATTTGCAGAAATACTCACTGGAAAACCCCTGTTTCCTGGGAAAAACGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGCACGCCTTCTTCAGAATCCATTGCAAGGATTCGGAATGAAAAAGCAAGAAGGTATCTTAGTAGCATGCGAAAAAAACAACCAGTTCCCTTCACACATAAGTTCCCTAATGCAGATCCGTTGGCTCTTCGCCTGTTGGAGCAACTTCTTGCATTTGATCCCAAAGATCGTCCGACAGCTGACGAGGCATTAGCTGATCCATACTTTCATGGTTTGGCAAATGTTGATCGTGAGCCGTCCACTCAACCCATTTCAAAACTTGAATTTGAGTTTGAGCGAAGGAAATTGACAAAAGATGATGTCAGAGAGTTGATTTACAGGGAGATTTTAGAGTATCATCCCCAGATGCTGCAGGAGTATCTTCGAGGGGGAGATCAAACGAGCAGCTTTATGTATCCTAGTGGTGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAACACTATGGTAAAGGTGAAAGGGGCACTCCTCCACTCCAAAGGCAGCATGCCTCCTTGCCCAGAGAGCGGGTTCCTGCACCCAAGGAGGATGCTGACCAAAGCAATGAATCGGAAAGGACTGCCGCTTCTGTTGCCACAACTCTTCACAGCCCTCCATCTGATGGCTCTGATAATCCAAATGCAAATGGACCTAGCAAGACACAGTACACTCCAGTATCTAGTCGCAGCCTGTTGAAGAGTGCCAGCATCAGTGCTTCCAAGTGTATAGGTGTAGTGAAAAAAGATTCGCAGGAGGATCCAATTGCTGAGGTCAACGATGAGTCAGTTGATGGTTTGGCCCAAAAGGTCGAAGCTCTTCGTGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PI3_PI4_kinase ubiquitin

Protein Analysis

620

Amino Acids

70.12

Weight (kDa)

6.51

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	129 - 420	5.8e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	130 - 339	3e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24240 AT5G24240
fragaria_vesca	FvH4_5g04790 FvH4_7g31640 FvH4_7g31640
malus_domestica	MD06G1109000.v1.1 MD14G1129900.v1.1
prunus_persica	Prupe.2G310500_v2.0.a1 Prupe.2G310500_v2.0.a1 Prupe.5G121800_v2.0.a1
pyrus_communis	pycom06g10230
rosa_chinensis	RchiOBHm_Chr1g0380721 RchiOBHm_Chr7g0194461
rosa_laevigata	RLG00000004199 RLG00000026274
rosa_multiflora	Rmu_co8342205.1_g000001 Rmu_co8403341.1_g000001 Rmu_sc0001637.1_g000011 Rmu_sc0006267.1_g000003 Rmu_sc0034746.1_g000002 Rmu_ssc0000261.1_g000026
rosa_roxburghii	Rroxscaffold_3G00261340 Rroxscaffold_4G00279080
rosa_rugosa	Rorug01G0423900 Rorug07G0015800
rosa_samantha	Rh1AG448000 Rh1BG401100 Rh1BG403500 Rh1CG415500 Rh1CG417800 Rh1DG431300 Rh1DG433800 Rh7AG143100 Rh7BG143600 Rh7CG147400 Rh7DG145000
rosa_wichuraiana	Rw0G005880 Rw1G039000 Rw7G012250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	147
Acc65I	GGTACC	2 cut(s)	384, 894
AccB1I	GGYRCC	2 cut(s)	384, 894
AccB7I	CCANNNNNTGG	1 cut(s)	1658
AccBSI	CCGCTC	1 cut(s)	1564
AccII	CGCG	1 cut(s)	167
AciI	CCGC	5 cut(s)	177, 274, 437, 1564, 1620
AclWI	GGATC	8 cut(s)	511, 524, 1041, 1163, 1205, 1244, 1787, 1800
AcsI	RAATTY	3 cut(s)	115, 353, 1316
AcuI	CTGAAG	3 cut(s)	197, 271, 1050
AfaI	GTAC	6 cut(s)	55, 94, 386, 710, 896, 1703
AfiI	CCNNNNNNNGG	6 cut(s)	193, 394, 655, 1080, 1563, 1658
AgsI	TTSAA	8 cut(s)	47, 253, 569, 844, 1308, 1316, 1471, 1732
AhlI	ACTAGT	1 cut(s)	89
AjnI	CCWGG	2 cut(s)	654, 1006
AluBI	AGCT	8 cut(s)	256, 293, 535, 715, 1232, 1247, 1440, 1850
AluI	AGCT	8 cut(s)	256, 293, 535, 715, 1232, 1247, 1440, 1850
Alw21I	GWGCWC	1 cut(s)	1026
Alw26I	GTCTC	2 cut(s)	188, 505
Alw44I	GTGCAC	1 cut(s)	1022
AlwI	GGATC	8 cut(s)	511, 524, 1041, 1163, 1205, 1244, 1787, 1800
AlwNI	CAGNNNCTG	1 cut(s)	1402
Ama87I	CYCGRG	1 cut(s)	831
AoxI	GGCC	2 cut(s)	276, 1833
ApaI	GGGCCC	1 cut(s)	280
ApaLI	GTGCAC	1 cut(s)	1022
ApeKI	GCWGC	4 cut(s)	1402, 1437, 1540, 1722
ApoI	RAATTY	3 cut(s)	115, 353, 1316
AseI	ATTAAT	2 cut(s)	78, 480
Asp700I	GAANNNNTTC	1 cut(s)	1851
Asp718I	GGTACC	2 cut(s)	384, 894
AspLEI	GCGC	2 cut(s)	167, 169
AspS9I	GGNCC	4 cut(s)	276, 277, 1685, 1834
AsuHPI	GGTGA	1 cut(s)	1523
AvaI	CYCGRG	1 cut(s)	831
AvaII	GGWCC	1 cut(s)	1685
BaeGI	GKGCMC	3 cut(s)	280, 1026, 1523
BaeI	ACNNNNGTAYC	2 cut(s)	1695, 1728
BamHI	GGATCC	2 cut(s)	516, 1792
BanI	GGYRCC	2 cut(s)	384, 894
BanII	GRGCYC	2 cut(s)	280, 904
Bbv12I	GWGCWC	1 cut(s)	1026
BbvCI	CCTCAGC	1 cut(s)	1803
BbvI	GCAGC	4 cut(s)	1389, 1449, 1552, 1734
BccI	CCATC	7 cut(s)	213, 631, 862, 885, 1652, 1660, 1820
BceAI	ACGGC	1 cut(s)	1273
BciT130I	CCWGG	2 cut(s)	656, 1008
BciVI	GTATCC	1 cut(s)	1458
BcoDI	GTCTC	2 cut(s)	188, 505
BcuI	ACTAGT	1 cut(s)	89
BfaI	CTAG	5 cut(s)	90, 344, 1452, 1689, 1716
BfmI	CTRYAG	1 cut(s)	1403
BfuI	GTATCC	1 cut(s)	1458
BisI	GCNGC	5 cut(s)	1403, 1438, 1541, 1620, 1723
BlsI	GCNGC	5 cut(s)	1404, 1439, 1542, 1621, 1724
BmcAI	AGTACT	1 cut(s)	94
Bme1390I	CCNGG	2 cut(s)	656, 1008
Bme18I	GGWCC	1 cut(s)	1685
BmeT110I	CYCGRG	1 cut(s)	831
BmgT120I	GGNCC	4 cut(s)	276, 277, 1685, 1834
BmiI	GGNNCC	6 cut(s)	278, 386, 518, 896, 1569, 1794
BmrFI	CCNGG	2 cut(s)	656, 1008
BmsI	GCATC	6 cut(s)	496, 838, 956, 1389, 1576, 1752
BplI	GAGNNNNNCTC	2 cut(s)	485, 517
BpmI	CTGGAG	3 cut(s)	474, 976, 1692
Bpu10I	CCTNAGC	2 cut(s)	687, 1803
BpuEI	CTTGAG	1 cut(s)	1511
Bsa29I	ATCGAT	1 cut(s)	1465
BsaI	GGTCTC	1 cut(s)	188
BsaJI	CCNNGG	3 cut(s)	18, 1007, 1578
BsaXI	ACNNNNNCTCC	2 cut(s)	447, 477
Bsc4I	CCNNNNNNNGG	6 cut(s)	193, 394, 655, 1080, 1563, 1658
Bse118I	RCCGGY	1 cut(s)	381
Bse1I	ACTGG	4 cut(s)	457, 994, 1136, 1709
Bse3DI	GCAATG	2 cut(s)	1074, 1606
BseBI	CCWGG	2 cut(s)	656, 1008
BseCI	ATCGAT	1 cut(s)	1465
BseDI	CCNNGG	3 cut(s)	18, 1007, 1578
BseGI	GGATG	5 cut(s)	258, 553, 971, 1390, 1591
BseLI	CCNNNNNNNGG	6 cut(s)	193, 394, 655, 1080, 1563, 1658
BseMI	GCAATG	2 cut(s)	1074, 1606
BseMII	CTCAG	4 cut(s)	512, 516, 678, 1794
BseNI	ACTGG	4 cut(s)	457, 994, 1136, 1709
BsePI	GCGCGC	1 cut(s)	165
BseRI	GAGGAG	2 cut(s)	209, 1515
BseSI	GKGCMC	3 cut(s)	280, 1026, 1523
BseXI	GCAGC	4 cut(s)	1389, 1449, 1552, 1734
BsgI	GTGCAG	1 cut(s)	1557
Bsh1236I	CGCG	1 cut(s)	167
BshFI	GGCC	2 cut(s)	278, 1835
BshNI	GGYRCC	2 cut(s)	384, 894
BshVI	ATCGAT	1 cut(s)	1465
BsiHKAI	GWGCWC	1 cut(s)	1026
BsiHKCI	CYCGRG	1 cut(s)	831
BsiSI	CCGG	1 cut(s)	382
BslI	CCNNNNNNNGG	6 cut(s)	193, 394, 655, 1080, 1563, 1658
BsmAI	GTCTC	2 cut(s)	188, 505
BsmI	GAATGC	1 cut(s)	796
BsnI	GGCC	2 cut(s)	278, 1835
Bso31I	GGTCTC	1 cut(s)	188
BsoBI	CYCGRG	1 cut(s)	831
Bsp120I	GGGCCC	1 cut(s)	276
Bsp1286I	GDGCHC	4 cut(s)	280, 904, 1026, 1523
BspACI	CCGC	5 cut(s)	177, 274, 437, 1564, 1620
BspANI	GGCC	2 cut(s)	278, 1835
BspCNI	CTCAG	4 cut(s)	513, 515, 679, 1795
BspDI	ATCGAT	1 cut(s)	1465
BspFNI	CGCG	1 cut(s)	167
BspHI	TCATGA	1 cut(s)	1038
BspLI	GGNNCC	6 cut(s)	278, 386, 518, 896, 1569, 1794
BspMAI	CTGCAG	1 cut(s)	1407
BspPI	GGATC	8 cut(s)	511, 524, 1041, 1163, 1205, 1244, 1787, 1800
BspQI	GCTCTTC	3 cut(s)	329, 1185, 1857
BspT107I	GGYRCC	2 cut(s)	384, 894
BspTNI	GGTCTC	1 cut(s)	188
BsrBI	CCGCTC	1 cut(s)	1564
BsrDI	GCAATG	2 cut(s)	1074, 1606
BsrFI	RCCGGY	1 cut(s)	381
BsrI	ACTGG	4 cut(s)	457, 994, 1136, 1709
BssAI	RCCGGY	1 cut(s)	381
BssECI	CCNNGG	3 cut(s)	18, 1007, 1578
BssHII	GCGCGC	1 cut(s)	165
BssT1I	CCWWGG	2 cut(s)	18, 1578
Bst2UI	CCWGG	2 cut(s)	656, 1008
Bst4CI	ACNGT	3 cut(s)	29, 1479, 1701
Bst6I	CTCTTC	7 cut(s)	64, 70, 329, 1185, 1644, 1727, 1857
BstAPI	GCANNNNNTGC	2 cut(s)	583, 966
BstC8I	GCNNGC	9 cut(s)	154, 167, 276, 379, 828, 1058, 1121, 1545, 1741
BstDEI	CTNAG	5 cut(s)	502, 521, 687, 1112, 1803
BstENI	CCTNNNNNAGG	1 cut(s)	653
BstF5I	GGATG	5 cut(s)	258, 553, 971, 1390, 1591
BstFNI	CGCG	1 cut(s)	167
BstHHI	GCGC	2 cut(s)	167, 169
BstMAI	GTCTC	2 cut(s)	188, 505
BstMWI	GCNNNNNNNGC	9 cut(s)	162, 583, 857, 966, 1057, 1238, 1561, 1628, 1856
BstNI	CCWGG	2 cut(s)	656, 1008
BstNSI	RCATGY	3 cut(s)	500, 1123, 1547
BstSCI	CCNGG	2 cut(s)	654, 1006
BstSFI	CTRYAG	1 cut(s)	1403
BstSLI	GKGCMC	3 cut(s)	280, 1026, 1523
BstUI	CGCG	1 cut(s)	167
BstV1I	GCAGC	4 cut(s)	1389, 1449, 1552, 1734
BstX2I	RGATCY	4 cut(s)	516, 1033, 1168, 1792
BstYI	RGATCY	4 cut(s)	516, 1033, 1168, 1792
Bsu15I	ATCGAT	1 cut(s)	1465
BsuI	GTATCC	1 cut(s)	1458
BsuRI	GGCC	2 cut(s)	278, 1835
BsuTUI	ATCGAT	1 cut(s)	1465
BtsCI	GGATG	5 cut(s)	258, 553, 971, 1390, 1591
BtsIMutI	CAGTG	3 cut(s)	450, 987, 1753
Cac8I	GCNNGC	9 cut(s)	154, 167, 276, 379, 828, 1058, 1121, 1545, 1741
CaiI	CAGNNNCTG	1 cut(s)	1402
CciI	TCATGA	1 cut(s)	1038
CfoI	GCGC	2 cut(s)	167, 169
Cfr10I	RCCGGY	1 cut(s)	381
Cfr13I	GGNCC	4 cut(s)	276, 277, 1685, 1834
ClaI	ATCGAT	1 cut(s)	1465
CsiI	ACCWGGT	1 cut(s)	654
Csp6I	GTAC	6 cut(s)	54, 93, 385, 709, 895, 1702
CspCI	CAANNNNNGTGG	1 cut(s)	38
CviAII	CATG	6 cut(s)	140, 497, 1039, 1120, 1262, 1544
CviQI	GTAC	6 cut(s)	54, 93, 385, 709, 895, 1702
DdeI	CTNAG	5 cut(s)	502, 521, 687, 1112, 1803
DraI	TTTAAA	2 cut(s)	729, 768
Eam1104I	CTCTTC	7 cut(s)	64, 70, 329, 1185, 1644, 1727, 1857
EarI	CTCTTC	7 cut(s)	64, 70, 329, 1185, 1644, 1727, 1857
Eco130I	CCWWGG	2 cut(s)	18, 1578
Eco24I	GRGCYC	2 cut(s)	280, 904
Eco31I	GGTCTC	1 cut(s)	188
Eco32I	GATATC	2 cut(s)	616, 952
Eco47I	GGWCC	1 cut(s)	1685
Eco57I	CTGAAG	3 cut(s)	197, 271, 1050
Eco88I	CYCGRG	1 cut(s)	831
EcoNI	CCTNNNNNAGG	1 cut(s)	653
EcoRI	GAATTC	2 cut(s)	115, 353
EcoRII	CCWGG	2 cut(s)	654, 1006
EcoRV	GATATC	2 cut(s)	616, 952
EcoT14I	CCWWGG	2 cut(s)	18, 1578
EcoT22I	ATGCAT	1 cut(s)	971
EcoT38I	GRGCYC	2 cut(s)	280, 904
ErhI	CCWWGG	2 cut(s)	18, 1578
FaeI	CATG	6 cut(s)	143, 500, 1042, 1123, 1265, 1547
FatI	CATG	6 cut(s)	139, 496, 1038, 1119, 1261, 1543
FauI	CCCGC	2 cut(s)	267, 1557
Fnu4HI	GCNGC	5 cut(s)	1403, 1438, 1541, 1620, 1723
FokI	GGATG	5 cut(s)	245, 540, 978, 1377, 1598
FriOI	GRGCYC	2 cut(s)	280, 904
Fsp4HI	GCNGC	5 cut(s)	1403, 1438, 1541, 1620, 1723
FspBI	CTAG	5 cut(s)	90, 344, 1452, 1689, 1716
GlaI	GCGC	2 cut(s)	166, 168
GluI	GCNGC	5 cut(s)	1403, 1438, 1541, 1620, 1723
GsuI	CTGGAG	3 cut(s)	474, 976, 1692
HaeIII	GGCC	2 cut(s)	278, 1835
HapII	CCGG	1 cut(s)	382
HhaI	GCGC	2 cut(s)	167, 169
Hin1II	CATG	6 cut(s)	143, 500, 1042, 1123, 1265, 1547
Hin6I	GCGC	2 cut(s)	165, 167
HinP1I	GCGC	2 cut(s)	165, 167
HincII	GTYRAC	2 cut(s)	442, 1810
HindII	GTYRAC	2 cut(s)	442, 1810
HindIII	AAGCTT	1 cut(s)	533
HinfI	GANTC	8 cut(s)	347, 641, 1070, 1084, 1467, 1604, 1781, 1817
HpaII	CCGG	1 cut(s)	382
HphI	GGTGA	1 cut(s)	1523
Hpy166II	GTNNAC	6 cut(s)	25, 442, 1024, 1293, 1704, 1810
Hpy8I	GTNNAC	6 cut(s)	25, 442, 1024, 1293, 1704, 1810
Hpy99I	CGWCG	3 cut(s)	39, 54, 603
HpyAV	CCTTC	5 cut(s)	603, 1071, 1098, 1153, 1326
HpyCH4III	ACNGT	3 cut(s)	29, 1479, 1701
HpyCH4IV	ACGT	2 cut(s)	49, 1017
HpyF10VI	GCNNNNNNNGC	9 cut(s)	162, 583, 857, 966, 1057, 1238, 1561, 1628, 1856
HpyF3I	CTNAG	5 cut(s)	502, 521, 687, 1112, 1803
HpySE526I	ACGT	2 cut(s)	49, 1017
Hsp92II	CATG	6 cut(s)	143, 500, 1042, 1123, 1265, 1547
HspAI	GCGC	2 cut(s)	165, 167
KpnI	GGTACC	2 cut(s)	388, 898
LguI	GCTCTTC	3 cut(s)	329, 1185, 1857
LmnI	GCTCC	3 cut(s)	11, 957, 1192
Lsp1109I	GCAGC	4 cut(s)	1389, 1449, 1552, 1734
LweI	GCATC	6 cut(s)	496, 838, 956, 1389, 1576, 1752
MabI	ACCWGGT	1 cut(s)	654
MaeI	CTAG	5 cut(s)	90, 344, 1452, 1689, 1716
MaeII	ACGT	2 cut(s)	49, 1017
MaeIII	GTNAC	1 cut(s)	815
MbiI	CCGCTC	1 cut(s)	1564
MfeI	CAATTG	3 cut(s)	945, 1028, 1797
MflI	RGATCY	4 cut(s)	516, 1033, 1168, 1792
MhlI	GDGCHC	4 cut(s)	280, 904, 1026, 1523
MluCI	AATT	8 cut(s)	115, 353, 803, 945, 1028, 1316, 1337, 1797
MlyI	GAGTC	2 cut(s)	356, 1826
MmeI	TCCRAC	2 cut(s)	1170, 1250
Mph1103I	ATGCAT	1 cut(s)	971
MroXI	GAANNNNTTC	1 cut(s)	1851
MseI	TTAA	6 cut(s)	78, 161, 480, 728, 767, 806
MspA1I	CMGCKG	2 cut(s)	179, 1232
MspI	CCGG	1 cut(s)	382
MspR9I	CCNGG	2 cut(s)	656, 1008
MunI	CAATTG	3 cut(s)	945, 1028, 1797
Mva1269I	GAATGC	1 cut(s)	796
MvaI	CCWGG	2 cut(s)	656, 1008
MvnI	CGCG	1 cut(s)	167
MwoI	GCNNNNNNNGC	9 cut(s)	162, 583, 857, 966, 1057, 1238, 1561, 1628, 1856
NlaIII	CATG	6 cut(s)	143, 500, 1042, 1123, 1265, 1547
NlaIV	GGNNCC	6 cut(s)	278, 386, 518, 896, 1569, 1794
NmuCI	GTSAC	1 cut(s)	815
NsiI	ATGCAT	1 cut(s)	971
NspI	RCATGY	3 cut(s)	500, 1123, 1547
PaeI	GCATGC	2 cut(s)	1123, 1547
PaeR7I	CTCGAG	1 cut(s)	831
PagI	TCATGA	1 cut(s)	1038
PauI	GCGCGC	1 cut(s)	165
PciSI	GCTCTTC	3 cut(s)	329, 1185, 1857
PcsI	WCGNNNNNNNCGW	3 cut(s)	547, 895, 1471
PctI	GAATGC	1 cut(s)	796
PdmI	GAANNNNTTC	1 cut(s)	1851
PfeI	GAWTC	6 cut(s)	641, 1070, 1084, 1467, 1604, 1781
PflMI	CCANNNNNTGG	1 cut(s)	1658
PkrI	GCNGC	5 cut(s)	1404, 1439, 1542, 1621, 1724
PleI	GAGTC	2 cut(s)	355, 1825
PpsI	GAGTC	2 cut(s)	355, 1825
PshBI	ATTAAT	2 cut(s)	78, 480
PsiI	TTATAA	1 cut(s)	147
Psp6I	CCWGG	2 cut(s)	654, 1006
PspGI	CCWGG	2 cut(s)	654, 1006
PspN4I	GGNNCC	6 cut(s)	278, 386, 518, 896, 1569, 1794
PspOMI	GGGCCC	1 cut(s)	276
PspPI	GGNCC	4 cut(s)	276, 277, 1685, 1834
PspXI	VCTCGAGB	1 cut(s)	831
PstI	CTGCAG	1 cut(s)	1407
PstNI	CAGNNNCTG	1 cut(s)	1402
PsuI	RGATCY	4 cut(s)	516, 1033, 1168, 1792
PteI	GCGCGC	1 cut(s)	165
PvuII	CAGCTG	1 cut(s)	1232
RsaI	GTAC	6 cut(s)	55, 94, 386, 710, 896, 1703
RsaNI	GTAC	6 cut(s)	54, 93, 385, 709, 895, 1702
SapI	GCTCTTC	3 cut(s)	329, 1185, 1857
SaqAI	TTAA	6 cut(s)	78, 161, 480, 728, 767, 806
SatI	GCNGC	5 cut(s)	1403, 1438, 1541, 1620, 1723
Sau96I	GGNCC	4 cut(s)	276, 277, 1685, 1834
ScaI	AGTACT	1 cut(s)	94
SchI	GAGTC	2 cut(s)	356, 1826
ScrFI	CCNGG	2 cut(s)	656, 1008
SduI	GDGCHC	4 cut(s)	280, 904, 1026, 1523
SexAI	ACCWGGT	1 cut(s)	654
SfaNI	GCATC	6 cut(s)	496, 838, 956, 1389, 1576, 1752
SfcI	CTRYAG	1 cut(s)	1403
Sfr274I	CTCGAG	1 cut(s)	831
SinI	GGWCC	1 cut(s)	1685
SlaI	CTCGAG	1 cut(s)	831
SmlI	CTYRAG	2 cut(s)	831, 1490
SmoI	CTYRAG	2 cut(s)	831, 1490
SpeI	ACTAGT	1 cut(s)	89
SphI	GCATGC	2 cut(s)	1123, 1547
Sse9I	AATT	8 cut(s)	115, 353, 803, 945, 1028, 1316, 1337, 1797
SsiI	CCGC	5 cut(s)	177, 274, 437, 1564, 1620
SspMI	CTAG	5 cut(s)	90, 344, 1452, 1689, 1716
StyD4I	CCNGG	2 cut(s)	654, 1006
StyI	CCWWGG	2 cut(s)	18, 1578
TaaI	ACNGT	3 cut(s)	29, 1479, 1701
TaiI	ACGT	2 cut(s)	52, 1020
TaqI	TCGA	7 cut(s)	237, 760, 832, 889, 1417, 1465, 1845
TasI	AATT	8 cut(s)	115, 353, 803, 945, 1028, 1316, 1337, 1797
TatI	WGTACW	2 cut(s)	92, 1701
TauI	GCSGC	1 cut(s)	1622
TfiI	GAWTC	6 cut(s)	641, 1070, 1084, 1467, 1604, 1781
Tru1I	TTAA	6 cut(s)	78, 161, 480, 728, 767, 806
Tru9I	TTAA	6 cut(s)	78, 161, 480, 728, 767, 806
TscAI	CASTG	3 cut(s)	457, 994, 1753
TseFI	GTSAC	1 cut(s)	815
TseI	GCWGC	4 cut(s)	1402, 1437, 1540, 1722
Tsp45I	GTSAC	1 cut(s)	815
TspDTI	ATGAA	5 cut(s)	728, 746, 1107, 1250, 1617
TspGWI	ACGGA	1 cut(s)	1161
TspRI	CASTG	3 cut(s)	457, 994, 1753
Van91I	CCANNNNNTGG	1 cut(s)	1658
VneI	GTGCAC	1 cut(s)	1022
VpaK11BI	GGWCC	1 cut(s)	1685
VspI	ATTAAT	2 cut(s)	78, 480
XagI	CCTNNNNNAGG	1 cut(s)	653
XapI	RAATTY	3 cut(s)	115, 353, 1316
XbaI	TCTAGA	1 cut(s)	343
XceI	RCATGY	3 cut(s)	500, 1123, 1547
XcmI	CCANNNNNNNNNTGG	1 cut(s)	719
XhoI	CTCGAG	1 cut(s)	831
XmnI	GAANNNNTTC	1 cut(s)	1851
XspI	CTAG	5 cut(s)	90, 344, 1452, 1689, 1716
ZrmI	AGTACT	1 cut(s)	94
Zsp2I	ATGCAT	1 cut(s)	971

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.