Rh1AG448000

Phosphatidylinositol 4-kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
66785131 .. 66787023
1893 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG448000.1

Sequence Viewer

Length: 1731 bp
ATGTCTATTGCCAGTGTAGCTCTTAGTCCCGTATATGAAGAATCTTTGAACTTCCCTTGCAATTTCGCCGGTGGATATGGGCTGTCATCGGGTAACTCCATTATGATATACCTCAGTGTTGGTGGGTCTGTGATTCCAATGTGTGTGACTGAGTCAGATTCCATTGCCTCGGTAAAACTGAGAATCCAGGCCTCGAAAGGGTTTTTTGTGAAGAAACAGAAGCTGGTTTTTGAAGGTAGGGAATTGGCTAGGAACAATTCTCAGGTAAGGGACTATGGGGTAACTGATGGGAACCTATTGCACTTGGTACTTAGGCTTTCGGATCTCCAGGCTATTACTGTTAGGACTGTGTGTGGCAAGGAGTTTGAGTTGCATGTTGAGAGGAGTAGAAATGTTGGTTATGTGAAGCAGCAGATTGCTAAGAAAGGGTCTGTTGATCTCAAAGATCAGGAACTTGTATGTGATGGTCAAGAGCTTGAAGATCAGAGACTCATTAATGAAATATGCAGAAGTAACGATGCTGTTATTCATTTGCTGGTCCGGAAATCTGCTAAGGTTAGAGCTAAACCTATAGAAAAGGATTTTGTAGTGTCAATTGAGGCATTAAATTTGAATGAGAAGAAGCCTGCTTTTGCCAGAGAAGTTGTGGGATGTCAAGTTTTAGAGAGGAAAGCAATTGGAAGAGAACTCGTTTTGGAACCTCTAATTGTAAATCCTAAGATTGAATTTTCATTAGGGATTAAAAAGCTGATTTACTCTACTTTGGACGGGCTAGAGAGAGGCTGTGAGCCAGTTCGCTCTTCAGAGGGATCTGGTGGAGCTTATTTCATGCAAGACTCTTCTGGTCTGAAGTATGTTTCTGTTTTTAAGCCAATAGATGAGGAACCGATGGCAATGAATAACCCTCGGGGATTGCCCTTGTCAGTGGATGGTGAAGGTTTGAAGAAGGGTACAAGGGTTGGAGAAGGGGCATTGAGGGAAGTTGCAGCATACATTTTGGATCATCCAAGGACTGGGCCTCGTACATTTTATAATGAGGAGAATGGCTTTGCCGGGGTGCCACCCACAGTTATGGTCAAGTGCTTGCACAAAAGATTTAATCATCCAGAAGGTTATGATTCTGCTGCTAAGAACATGAAGATCGGATCGCTTCAGATGTACATGAAAAACAATGGAAGTTGTGAAGATATTGGTCCTCGCGCTTTTCCAGTGCAGGAGGTACATAAAATTTCTGTGCTGGACATGAGGTTGGCAAATGCAGACAGGCATGCTGGAAACATACTGATTAGTAGAGAGAGTGAAGACAGTGAGATTGTGCTTATTCCCATTGATCATGGGTATTGTTTGCCTGAGAATTTTGAAGATTGCACATTTGATTGGCTTTACTGGCCTCAAGCTCAGCAACCTTATTCCTCTGACACTCTTAACTACATCAAATCATTAGATGCCGAACAAGATATTGAACTTTTGAAGTTTCATGGATGGAACCTACCACCTGAATGTGCCCGCACTCTCCGCATTGCCACCTTGCTTCTAAAGAAAGGTGCAAAGAGAGGACTCACTCCCTTTGCCATCGGAAGCATCATGTGTAGGGAGACTTTGAAGAGAAAATCTGTTATTGAACATATCATTCAAGAAGCAAAAGAAGCTCAACTCCCAGGAACAAGTGAAGCTTCATTTCTCGAATCTGTGTCATCAATCATGGATCAACACCTTGATGAGCTTTACTAA

Protein Analysis

576

Amino Acids

64.07

Weight (kDa)

6.13

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ubiquitin PF00240 39 - 106 6.5e-14 Ubiquitin family
ubiquitin PF00240 112 - 182 5.6e-10 Ubiquitin family
PI3_PI4_kinase PF00454 271 - 524 2.5e-52 Phosphatidylinositol 3- and 4-kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1032
AccB1I GGYRCC 1 cut(s) 1057
AccB7I CCANNNNNTGG 1 cut(s) 1013
AccII CGCG 1 cut(s) 1200
AccIII TCCGGA 1 cut(s) 540
AciI CCGC 2 cut(s) 1507, 1516
AclWI GGATC 5 cut(s) 330, 817, 1008, 1153, 1713
AcsI RAATTY 4 cut(s) 607, 725, 1227, 1354
AcuI CTGAAG 3 cut(s) 786, 869, 1136
AfaI GTAC 5 cut(s) 309, 952, 1024, 1160, 1221
AfiI CCNNNNNNNGG 2 cut(s) 198, 1013
AjnI CCWGG 3 cut(s) 186, 327, 1657
Alw26I GTCTC 2 cut(s) 481, 1589
AlwI GGATC 5 cut(s) 330, 817, 1008, 1153, 1713
AlwNI CAGNNNCTG 1 cut(s) 223
Ama87I CYCGRG 1 cut(s) 906
Aor13HI TCCGGA 1 cut(s) 540
AoxI GGCC 3 cut(s) 189, 1016, 1388
ApeKI GCWGC 3 cut(s) 409, 986, 1124
ApoI RAATTY 4 cut(s) 607, 725, 1227, 1354
AseI ATTAAT 1 cut(s) 495
AspLEI GCGC 1 cut(s) 1202
AspS9I GGNCC 3 cut(s) 538, 1016, 1193
AsuC2I CCSGG 1 cut(s) 1054
AsuHPI GGTGA 1 cut(s) 944
AvaI CYCGRG 1 cut(s) 906
AvaII GGWCC 2 cut(s) 538, 1193
BaeGI GKGCMC 1 cut(s) 1507
BaeI ACNNNNGTAYC 2 cut(s) 942, 975
BanI GGYRCC 1 cut(s) 1057
BbsI GAAGAC 1 cut(s) 1308
BbvI GCAGC 3 cut(s) 421, 998, 1111
BccI CCATC 6 cut(s) 281, 458, 883, 923, 1476, 1580
BciT130I CCWGG 3 cut(s) 188, 329, 1659
BclI TGATCA 1 cut(s) 1330
BcnI CCSGG 1 cut(s) 1054
BcoDI GTCTC 2 cut(s) 481, 1589
BfaI CTAG 2 cut(s) 249, 773
BfmI CTRYAG 1 cut(s) 570
BisI GCNGC 3 cut(s) 410, 987, 1125
BlpI GCTNAGC 1 cut(s) 1398
BlsI GCNGC 3 cut(s) 411, 988, 1126
Bme1390I CCNGG 4 cut(s) 188, 329, 1054, 1659
Bme18I GGWCC 2 cut(s) 538, 1193
BmeT110I CYCGRG 1 cut(s) 906
BmgT120I GGNCC 3 cut(s) 538, 1016, 1193
BmiI GGNNCC 5 cut(s) 293, 699, 885, 1059, 1487
BmrFI CCNGG 4 cut(s) 188, 329, 1054, 1659
BmrI ACTGGG 1 cut(s) 1023
BmsI GCATC 3 cut(s) 508, 1435, 1590
BmuI ACTGGG 1 cut(s) 1023
BpiI GAAGAC 1 cut(s) 1308
BpmI CTGGAG 1 cut(s) 311
Bpu10I CCTNAGC 1 cut(s) 552
Bpu1102I GCTNAGC 1 cut(s) 1398
BpuEI CTTGAG 1 cut(s) 1377
BpuMI CCSGG 1 cut(s) 1054
BsaJI CCNNGG 5 cut(s) 168, 905, 1007, 1053, 1657
BsaWI WCCGGW 1 cut(s) 540
BsaXI ACNNNNNCTCC 2 cut(s) 353, 383
Bsc4I CCNNNNNNNGG 2 cut(s) 198, 1013
Bse118I RCCGGY 1 cut(s) 68
Bse1I ACTGG 5 cut(s) 12, 791, 1018, 1208, 1391
Bse3DI GCAATG 3 cut(s) 162, 900, 1518
BseAI TCCGGA 1 cut(s) 540
BseBI CCWGG 3 cut(s) 188, 329, 1659
BseDI CCNNGG 5 cut(s) 168, 905, 1007, 1053, 1657
BseGI GGATG 5 cut(s) 656, 934, 1003, 1102, 1487
BseLI CCNNNNNNNGG 2 cut(s) 198, 1013
BseMI GCAATG 3 cut(s) 162, 900, 1518
BseMII CTCAG 6 cut(s) 127, 141, 170, 275, 1341, 1412
BseNI ACTGG 5 cut(s) 12, 791, 1018, 1208, 1391
BseRI GAGGAG 2 cut(s) 397, 1052
BseSI GKGCMC 1 cut(s) 1507
BseXI GCAGC 3 cut(s) 421, 998, 1111
BsgI GTGCAG 1 cut(s) 1232
Bsh1236I CGCG 1 cut(s) 1200
BshFI GGCC 3 cut(s) 191, 1018, 1390
BshNI GGYRCC 1 cut(s) 1057
BsiHKCI CYCGRG 1 cut(s) 906
BsiSI CCGG 3 cut(s) 69, 541, 1053
BslFI GGGAC 2 cut(s) 12, 284
BslI CCNNNNNNNGG 2 cut(s) 198, 1013
BsmAI GTCTC 2 cut(s) 481, 1589
BsmFI GGGAC 2 cut(s) 12, 284
BsnI GGCC 3 cut(s) 191, 1018, 1390
BsoBI CYCGRG 1 cut(s) 906
Bsp1286I GDGCHC 1 cut(s) 1507
Bsp13I TCCGGA 1 cut(s) 540
Bsp1407I TGTACA 1 cut(s) 1158
Bsp1720I GCTNAGC 1 cut(s) 1398
BspACI CCGC 2 cut(s) 1507, 1516
BspANI GGCC 3 cut(s) 191, 1018, 1390
BspCNI CTCAG 6 cut(s) 126, 142, 171, 274, 1342, 1411
BspEI TCCGGA 1 cut(s) 540
BspFNI CGCG 1 cut(s) 1200
BspLI GGNNCC 5 cut(s) 293, 699, 885, 1059, 1487
BspPI GGATC 5 cut(s) 330, 817, 1008, 1153, 1713
BspQI GCTCTTC 1 cut(s) 805
BspT107I GGYRCC 1 cut(s) 1057
BsrDI GCAATG 3 cut(s) 162, 900, 1518
BsrFI RCCGGY 1 cut(s) 68
BsrGI TGTACA 1 cut(s) 1158
BsrI ACTGG 5 cut(s) 12, 791, 1018, 1208, 1391
BssAI RCCGGY 1 cut(s) 68
BssECI CCNNGG 5 cut(s) 168, 905, 1007, 1053, 1657
BssT1I CCWWGG 1 cut(s) 1007
Bst2UI CCWGG 3 cut(s) 188, 329, 1659
Bst4CI ACNGT 4 cut(s) 340, 349, 1069, 1307
Bst6I CTCTTC 4 cut(s) 676, 805, 844, 1598
BstAUI TGTACA 1 cut(s) 1158
BstC8I GCNNGC 4 cut(s) 627, 1085, 1269, 1507
BstF5I GGATG 5 cut(s) 656, 934, 1003, 1102, 1487
BstFNI CGCG 1 cut(s) 1200
BstHHI GCGC 1 cut(s) 1202
BstMAI GTCTC 2 cut(s) 481, 1589
BstMWI GCNNNNNNNGC 4 cut(s) 17, 1387, 1515, 1646
BstNI CCWGG 3 cut(s) 188, 329, 1659
BstNSI RCATGY 2 cut(s) 377, 1271
BstSCI CCNGG 4 cut(s) 186, 327, 1052, 1657
BstSFI CTRYAG 1 cut(s) 570
BstSLI GKGCMC 1 cut(s) 1507
BstUI CGCG 1 cut(s) 1200
BstV1I GCAGC 3 cut(s) 421, 998, 1111
BstV2I GAAGAC 1 cut(s) 1308
BstX2I RGATCY 2 cut(s) 322, 809
BstXI CCANNNNNNTGG 1 cut(s) 1072
BstYI RGATCY 2 cut(s) 322, 809
BsuRI GGCC 3 cut(s) 191, 1018, 1390
BtsCI GGATG 5 cut(s) 656, 934, 1003, 1102, 1487
BtsIMutI CAGTG 5 cut(s) 19, 121, 930, 1215, 1312
Cac8I GCNNGC 4 cut(s) 627, 1085, 1269, 1507
CaiI CAGNNNCTG 1 cut(s) 223
CfoI GCGC 1 cut(s) 1202
Cfr10I RCCGGY 1 cut(s) 68
Cfr13I GGNCC 3 cut(s) 538, 1016, 1193
Csp6I GTAC 5 cut(s) 308, 951, 1023, 1159, 1220
CviQI GTAC 5 cut(s) 308, 951, 1023, 1159, 1220
Eam1104I CTCTTC 4 cut(s) 676, 805, 844, 1598
EarI CTCTTC 4 cut(s) 676, 805, 844, 1598
Eco130I CCWWGG 1 cut(s) 1007
Eco147I AGGCCT 1 cut(s) 191
Eco47I GGWCC 2 cut(s) 538, 1193
Eco57I CTGAAG 3 cut(s) 786, 869, 1136
Eco88I CYCGRG 1 cut(s) 906
EcoRII CCWGG 3 cut(s) 186, 327, 1657
EcoT14I CCWWGG 1 cut(s) 1007
ErhI CCWWGG 1 cut(s) 1007
FalI AAGNNNNNCTT 2 cut(s) 1657, 1689
FaqI GGGAC 2 cut(s) 12, 284
FauI CCCGC 1 cut(s) 1514
FbaI TGATCA 1 cut(s) 1330
Fnu4HI GCNGC 3 cut(s) 410, 987, 1125
FokI GGATG 5 cut(s) 663, 941, 990, 1089, 1494
Fsp4HI GCNGC 3 cut(s) 410, 987, 1125
FspBI CTAG 2 cut(s) 249, 773
GlaI GCGC 1 cut(s) 1201
GluI GCNGC 3 cut(s) 410, 987, 1125
GsuI CTGGAG 1 cut(s) 311
HaeIII GGCC 3 cut(s) 191, 1018, 1390
HapII CCGG 3 cut(s) 69, 541, 1053
HhaI GCGC 1 cut(s) 1202
Hin6I GCGC 1 cut(s) 1200
HinP1I GCGC 1 cut(s) 1200
HindIII AAGCTT 1 cut(s) 1671
HpaII CCGG 3 cut(s) 69, 541, 1053
HphI GGTGA 1 cut(s) 944
Hpy188I TCNGA 9 cut(s) 157, 322, 486, 805, 849, 1145, 1155, 1417, 1577
Hpy188III TCNNGA 6 cut(s) 449, 470, 541, 1106, 1634, 1682
HpyAV CCTTC 5 cut(s) 227, 929, 940, 959, 1103
HpyCH4III ACNGT 4 cut(s) 340, 349, 1069, 1307
HpyF10VI GCNNNNNNNGC 4 cut(s) 17, 1387, 1515, 1646
HspAI GCGC 1 cut(s) 1200
Kpn2I TCCGGA 1 cut(s) 540
Ksp22I TGATCA 1 cut(s) 1330
LguI GCTCTTC 1 cut(s) 805
LmnI GCTCC 1 cut(s) 818
Lsp1109I GCAGC 3 cut(s) 421, 998, 1111
LweI GCATC 3 cut(s) 508, 1435, 1590
MaeI CTAG 2 cut(s) 249, 773
MaeIII GTNAC 4 cut(s) 92, 145, 280, 512
MfeI CAATTG 2 cut(s) 594, 675
MflI RGATCY 2 cut(s) 322, 809
MhlI GDGCHC 1 cut(s) 1507
MlyI GAGTC 4 cut(s) 161, 483, 830, 1551
MmeI TCCRAC 1 cut(s) 940
MroI TCCGGA 1 cut(s) 540
MseI TTAA 6 cut(s) 495, 605, 741, 867, 1098, 1425
MslI CAYNNNNRTG 3 cut(s) 1070, 1498, 1716
MspI CCGG 3 cut(s) 69, 541, 1053
MspR9I CCNGG 4 cut(s) 188, 329, 1054, 1659
MunI CAATTG 2 cut(s) 594, 675
MvaI CCWGG 3 cut(s) 188, 329, 1659
MvnI CGCG 1 cut(s) 1200
MwoI GCNNNNNNNGC 4 cut(s) 17, 1387, 1515, 1646
NciI CCSGG 1 cut(s) 1054
NlaIV GGNNCC 5 cut(s) 293, 699, 885, 1059, 1487
NmuCI GTSAC 1 cut(s) 145
NspI RCATGY 2 cut(s) 377, 1271
PaeI GCATGC 1 cut(s) 1271
PceI AGGCCT 1 cut(s) 191
PciSI GCTCTTC 1 cut(s) 805
PfeI GAWTC 6 cut(s) 41, 133, 158, 183, 1118, 1685
PflFI GACNNNGTC 1 cut(s) 151
PflMI CCANNNNNTGG 1 cut(s) 1013
PkrI GCNGC 3 cut(s) 411, 988, 1126
PleI GAGTC 4 cut(s) 160, 483, 830, 1551
PpsI GAGTC 4 cut(s) 160, 483, 830, 1551
PshBI ATTAAT 1 cut(s) 495
PsiI TTATAA 1 cut(s) 1032
Psp6I CCWGG 3 cut(s) 186, 327, 1657
PspGI CCWGG 3 cut(s) 186, 327, 1657
PspN4I GGNNCC 5 cut(s) 293, 699, 885, 1059, 1487
PspPI GGNCC 3 cut(s) 538, 1016, 1193
PstNI CAGNNNCTG 1 cut(s) 223
PsuI RGATCY 2 cut(s) 322, 809
PsyI GACNNNGTC 1 cut(s) 151
RsaI GTAC 5 cut(s) 309, 952, 1024, 1160, 1221
RsaNI GTAC 5 cut(s) 308, 951, 1023, 1159, 1220
RseI CAYNNNNRTG 3 cut(s) 1070, 1498, 1716
SapI GCTCTTC 1 cut(s) 805
SaqAI TTAA 6 cut(s) 495, 605, 741, 867, 1098, 1425
SatI GCNGC 3 cut(s) 410, 987, 1125
Sau96I GGNCC 3 cut(s) 538, 1016, 1193
SchI GAGTC 4 cut(s) 161, 483, 830, 1551
ScrFI CCNGG 4 cut(s) 188, 329, 1054, 1659
SduI GDGCHC 1 cut(s) 1507
SfaNI GCATC 3 cut(s) 508, 1435, 1590
SfcI CTRYAG 1 cut(s) 570
SgrAI CRCCGGYG 1 cut(s) 68
SinI GGWCC 2 cut(s) 538, 1193
SmiMI CAYNNNNRTG 3 cut(s) 1070, 1498, 1716
SmlI CTYRAG 1 cut(s) 1392
SmoI CTYRAG 1 cut(s) 1392
SphI GCATGC 1 cut(s) 1271
SseBI AGGCCT 1 cut(s) 191
SsiI CCGC 2 cut(s) 1507, 1516
SspMI CTAG 2 cut(s) 249, 773
StuI AGGCCT 1 cut(s) 191
StyD4I CCNGG 4 cut(s) 186, 327, 1052, 1657
StyI CCWWGG 1 cut(s) 1007
TaaI ACNGT 4 cut(s) 340, 349, 1069, 1307
TaqI TCGA 2 cut(s) 194, 1683
TatI WGTACW 1 cut(s) 1158
TfiI GAWTC 6 cut(s) 41, 133, 158, 183, 1118, 1685
Tru1I TTAA 6 cut(s) 495, 605, 741, 867, 1098, 1425
Tru9I TTAA 6 cut(s) 495, 605, 741, 867, 1098, 1425
TscAI CASTG 5 cut(s) 19, 121, 930, 1215, 1312
TseFI GTSAC 1 cut(s) 145
TseI GCWGC 3 cut(s) 409, 986, 1124
Tsp45I GTSAC 1 cut(s) 145
TspRI CASTG 5 cut(s) 19, 121, 930, 1215, 1312
Tth111I GACNNNGTC 1 cut(s) 151
Van91I CCANNNNNTGG 1 cut(s) 1013
VpaK11BI GGWCC 2 cut(s) 538, 1193
VspI ATTAAT 1 cut(s) 495
XapI RAATTY 4 cut(s) 607, 725, 1227, 1354
XceI RCATGY 2 cut(s) 377, 1271
XcmI CCANNNNNNNNNTGG 1 cut(s) 643
XspI CTAG 2 cut(s) 249, 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.