Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000116.1

Orthogroup ID

OG0006649

Physical Location & Seq

Genomic Coordinates Forward (+)

85034 .. 89770

Gene Structure 4737 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

atgatgaccatgagtgcaactgtactagatgcaaccttggggatttatcagctagggtttgaaggttgggtacactttcactggaaattattctatgcaccgacggagaattcgctctcactaatgcgaatgcttattgatagccttagggtattctgggcagcgggtggcggcggctcgattgccgactgtgtagcatcggcgactcatcgtcgtggttctcggcggcgaaatttattgcgctgtcggatcgagatagatcggtggctgttcagggaggcaaagcttcagggaggccattctggtggttcagggtgtcgaagaggtttcgtaacggcttgggtttcttggtttcaggctttggctgagcggtgcatcaggtgtttcaggccgccggggattctgctcgaagttctggttccaagcttttccaatcaatcttctgtgcaggtgattaaggctcgccagagagaggtagcggagataattgctcccaatcagattcatctgattttggtgttcattgttagaggaaaaatggtgtggcggaaaggcaagccaccagctgatctgttgccggcgacggtggtgatgaccaggcaacttgattggacttctttttatttagctcagatttgggcttgggcagttaggccagggctcaattcgagtcaacagatttcaaagagcaagaagaccaacatgttgtcgagtttaatggataatgatcaaccttgtgcgaattccattattgacgatagccaaaagaagatgatgcatagagatattgaaaggaaaagaagacaagaaatggccgcgctttatgcatcactcagatccacactccctcctcagtctatcaagggaaagcgttcattggcagatcatatgaacgacgctgtgaatcatataaaacacctgcaaacgaggatcaaagaactcggtgcccagagagatgacctaaagatacaaacgtcgtcgccggatttgagttgtactagtgctcttggcctagctgggaatcttagtggatcaactggtagctcttcatcattgttagcaggcaacttttcaagaagccgtgttgcagtcaacccttgcttaggtggcgttgagattataataatcagctatgttactggtggttctgcagagccacaaggtgtggtcttatcaagattgctgcaaatactgcttgaacaaggacttactgtaattaattgtgctactacccaggttaacaaaaggcttgtatacaccatacaatccgaggttagcaatccatcatatatagactttcctgggctggagcagactctcgctaaagtcgtctcatcatcgaccggattttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090575 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

450

Amino Acids

49.77

Weight (kDa)

9.86

Isoelectric Point (pI)

55.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	256 - 308	5.2e-11	Helix-loop-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006649)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25400 AT4G25400 AT4G25410 AT5G51780 AT5G51780 AT5G51790 AT5G51790 AT5G51790 AT5G51790
fragaria_vesca	FvH4_7g28600 FvH4_7g28600 FvH4_7g28600
malus_domestica	MD01G1191600.v1.1
prunus_persica	Prupe.2G286000_v2.0.a1 Prupe.2G286000_v2.0.a1
pyrus_communis	pycom01g20280 pycom07g23850
rosa_chinensis	RchiOBHm_Chr1g0376011
rosa_laevigata	RLG00000026635
rosa_multiflora	Rmu_ssc0000116.1_g000014
rosa_roxburghii	Rroxscaffold_4G00282420
rosa_rugosa	Rorug01G0393700
rosa_samantha	Rh1BG368500 Rh1CG381400 Rh1DG398400
rosa_wichuraiana	Rw1G035920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1121
AarI	CACCTGC	2 cut(s)	439, 927
Acc36I	ACCTGC	2 cut(s)	439, 927
AccB1I	GGYRCC	1 cut(s)	944
AccBSI	CCGCTC	1 cut(s)	370
AccI	GTMKAC	1 cut(s)	1254
AccII	CGCG	1 cut(s)	818
AciI	CCGC	9 cut(s)	164, 171, 174, 226, 370, 392, 479, 547, 816
AclWI	GGATC	4 cut(s)	257, 831, 938, 1039
AcoI	YGGCCR	1 cut(s)	813
AcsI	RAATTY	3 cut(s)	109, 232, 742
AcuI	CTGAAG	1 cut(s)	272
AdeI	CACNNNGTG	1 cut(s)	1163
AfaI	GTAC	3 cut(s)	24, 72, 997
AfiI	CCNNNNNNNGG	2 cut(s)	472, 1103
AflIII	ACRYGT	1 cut(s)	702
AgsI	TTSAA	5 cut(s)	62, 684, 791, 1074, 1199
AhdI	GACNNNNNGTC	1 cut(s)	210
AhlI	ACTAGT	1 cut(s)	998
AjnI	CCWGG	4 cut(s)	596, 655, 1233, 1300
AluBI	AGCT	8 cut(s)	52, 286, 426, 566, 629, 1016, 1044, 1131
AluI	AGCT	8 cut(s)	52, 286, 426, 566, 629, 1016, 1044, 1131
Alw21I	GWGCWC	1 cut(s)	1006
Alw26I	GTCTC	1 cut(s)	1336
AlwI	GGATC	4 cut(s)	257, 831, 938, 1039
AoxI	GGCC	5 cut(s)	295, 389, 653, 813, 1009
ApeKI	GCWGC	2 cut(s)	161, 1183
ApoI	RAATTY	3 cut(s)	109, 232, 742
ArsI	GACNNNNNNTTYG	2 cut(s)	94, 126
AseI	ATTAAT	1 cut(s)	1218
Asp700I	GAANNNNTTC	2 cut(s)	89, 871
AspLEI	GCGC	2 cut(s)	243, 820
AsuC2I	CCSGG	1 cut(s)	396
AsuHPI	GGTGA	2 cut(s)	463, 601
AxyI	CCTNAGG	1 cut(s)	146
BaeGI	GKGCMC	1 cut(s)	949
BaeI	ACNNNNGTAYC	2 cut(s)	959, 992
BanI	GGYRCC	1 cut(s)	944
BanII	GRGCYC	1 cut(s)	663
BarI	GAAGNNNNNNTAC	2 cut(s)	54, 86
BbsI	GAAGAC	2 cut(s)	701, 808
Bbv12I	GWGCWC	1 cut(s)	1006
BbvI	GCAGC	2 cut(s)	173, 1170
BccI	CCATC	1 cut(s)	1291
BceAI	ACGGC	2 cut(s)	351, 1065
BciT130I	CCWGG	4 cut(s)	598, 657, 1235, 1302
BclI	TGATCA	1 cut(s)	727
BcnI	CCSGG	1 cut(s)	396
BcoDI	GTCTC	1 cut(s)	1336
BcuI	ACTAGT	1 cut(s)	998
BfaI	CTAG	4 cut(s)	26, 53, 999, 1013
BfmI	CTRYAG	1 cut(s)	1149
BfuAI	ACCTGC	2 cut(s)	439, 927
BisI	GCNGC	7 cut(s)	162, 172, 175, 227, 392, 816, 1184
BlpI	GCTNAGC	1 cut(s)	366
BlsI	GCNGC	7 cut(s)	163, 173, 176, 228, 393, 817, 1185
Bme1390I	CCNGG	5 cut(s)	396, 598, 657, 1235, 1302
BmeRI	GACNNNNNGTC	1 cut(s)	210
BmiI	GGNNCC	2 cut(s)	420, 946
BmrFI	CCNGG	5 cut(s)	396, 598, 657, 1235, 1302
BmsI	GCATC	5 cut(s)	19, 206, 384, 765, 836
BpiI	GAAGAC	2 cut(s)	701, 808
BpmI	CTGGAG	1 cut(s)	1328
Bpu10I	CCTNAGC	1 cut(s)	1102
Bpu1102I	GCTNAGC	1 cut(s)	366
BpuMI	CCSGG	1 cut(s)	396
BsaBI	GATNNNNATC	1 cut(s)	726
BsaJI	CCNNGG	6 cut(s)	36, 395, 656, 1233, 1269, 1301
BsaWI	WCCGGW	1 cut(s)	1343
BsaXI	ACNNNNNCTCC	2 cut(s)	832, 862
Bsc4I	CCNNNNNNNGG	2 cut(s)	472, 1103
Bse118I	RCCGGY	1 cut(s)	577
Bse1I	ACTGG	3 cut(s)	86, 1042, 1144
Bse21I	CCTNAGG	1 cut(s)	146
Bse8I	GATNNNNATC	1 cut(s)	726
BseBI	CCWGG	4 cut(s)	598, 657, 1235, 1302
BseDI	CCNNGG	6 cut(s)	36, 395, 656, 1233, 1269, 1301
BseJI	GATNNNNATC	1 cut(s)	726
BseLI	CCNNNNNNNGG	2 cut(s)	472, 1103
BseMII	CTCAG	4 cut(s)	357, 644, 847, 866
BseNI	ACTGG	3 cut(s)	86, 1042, 1144
BseRI	GAGGAG	1 cut(s)	840
BseSI	GKGCMC	1 cut(s)	949
BseXI	GCAGC	2 cut(s)	173, 1170
BseYI	CCCAGC	1 cut(s)	1016
BsgI	GTGCAG	1 cut(s)	467
Bsh1236I	CGCG	1 cut(s)	818
Bsh1285I	CGRYCG	1 cut(s)	1344
BshFI	GGCC	5 cut(s)	297, 391, 655, 815, 1011
BshNI	GGYRCC	1 cut(s)	944
BsiEI	CGRYCG	1 cut(s)	1344
BsiHKAI	GWGCWC	1 cut(s)	1006
BsiSI	CCGG	4 cut(s)	395, 578, 983, 1344
BslI	CCNNNNNNNGG	2 cut(s)	472, 1103
BsmAI	GTCTC	1 cut(s)	1336
BsmBI	CGTCTC	1 cut(s)	1336
BsmI	GAATGC	1 cut(s)	135
BsnI	GGCC	5 cut(s)	297, 391, 655, 815, 1011
Bsp1286I	GDGCHC	3 cut(s)	663, 949, 1006
Bsp143I	GATC	8 cut(s)	249, 259, 568, 727, 836, 883, 930, 1031
Bsp1720I	GCTNAGC	1 cut(s)	366
BspACI	CCGC	9 cut(s)	164, 171, 174, 226, 370, 392, 479, 547, 816
BspANI	GGCC	5 cut(s)	297, 391, 655, 815, 1011
BspCNI	CTCAG	4 cut(s)	358, 643, 846, 865
BspFNI	CGCG	1 cut(s)	818
BspLI	GGNNCC	2 cut(s)	420, 946
BspMAI	CTGCAG	1 cut(s)	1153
BspMI	ACCTGC	2 cut(s)	439, 927
BspPI	GGATC	4 cut(s)	257, 831, 938, 1039
BspQI	GCTCTTC	1 cut(s)	1051
BspT107I	GGYRCC	1 cut(s)	944
BsrBI	CCGCTC	1 cut(s)	370
BsrFI	RCCGGY	1 cut(s)	577
BsrI	ACTGG	3 cut(s)	86, 1042, 1144
BssAI	RCCGGY	1 cut(s)	577
BssECI	CCNNGG	6 cut(s)	36, 395, 656, 1233, 1269, 1301
BssMI	GATC	8 cut(s)	249, 259, 568, 727, 836, 883, 930, 1031
BssNAI	GTATAC	1 cut(s)	1255
BssT1I	CCWWGG	1 cut(s)	36
Bst1107I	GTATAC	1 cut(s)	1255
Bst2UI	CCWGG	4 cut(s)	598, 657, 1235, 1302
Bst4CI	ACNGT	4 cut(s)	22, 191, 586, 1213
Bst6I	CTCTTC	2 cut(s)	316, 1051
BstAPI	GCANNNNNTGC	1 cut(s)	1192
BstC8I	GCNNGC	4 cut(s)	463, 557, 579, 1063
BstDEI	CTNAG	7 cut(s)	146, 366, 630, 833, 852, 1025, 1102
BstENI	CCTNNNNNAGG	1 cut(s)	1101
BstFNI	CGCG	1 cut(s)	818
BstHHI	GCGC	2 cut(s)	243, 820
BstKTI	GATC	8 cut(s)	252, 262, 571, 730, 839, 886, 933, 1034
BstMAI	GTCTC	1 cut(s)	1336
BstMBI	GATC	8 cut(s)	249, 259, 568, 727, 836, 883, 930, 1031
BstMCI	CGRYCG	1 cut(s)	1344
BstMWI	GCNNNNNNNGC	3 cut(s)	824, 1107, 1192
BstNI	CCWGG	4 cut(s)	598, 657, 1235, 1302
BstNSI	RCATGY	1 cut(s)	706
BstSCI	CCNGG	5 cut(s)	394, 596, 655, 1233, 1300
BstSFI	CTRYAG	1 cut(s)	1149
BstSLI	GKGCMC	1 cut(s)	949
BstUI	CGCG	1 cut(s)	818
BstV1I	GCAGC	2 cut(s)	173, 1170
BstV2I	GAAGAC	2 cut(s)	701, 808
BstX2I	RGATCY	1 cut(s)	836
BstXI	CCANNNNNNTGG	1 cut(s)	305
BstYI	RGATCY	1 cut(s)	836
BstZ17I	GTATAC	1 cut(s)	1255
Bsu36I	CCTNAGG	1 cut(s)	146
BsuRI	GGCC	5 cut(s)	297, 391, 655, 815, 1011
BtsIMutI	CAGTG	1 cut(s)	79
BveI	ACCTGC	2 cut(s)	439, 927
Cac8I	GCNNGC	4 cut(s)	463, 557, 579, 1063
CfoI	GCGC	2 cut(s)	243, 820
Cfr10I	RCCGGY	1 cut(s)	577
CseI	GACGC	1 cut(s)	905
Csp6I	GTAC	3 cut(s)	23, 71, 996
CviAII	CATG	2 cut(s)	10, 703
CviQI	GTAC	3 cut(s)	23, 71, 996
DdeI	CTNAG	7 cut(s)	146, 366, 630, 833, 852, 1025, 1102
DpnI	GATC	8 cut(s)	251, 261, 570, 729, 838, 885, 932, 1033
DpnII	GATC	8 cut(s)	249, 259, 568, 727, 836, 883, 930, 1031
DraIII	CACNNNGTG	1 cut(s)	1163
DriI	GACNNNNNGTC	1 cut(s)	210
EaeI	YGGCCR	1 cut(s)	813
Eam1104I	CTCTTC	2 cut(s)	316, 1051
Eam1105I	GACNNNNNGTC	1 cut(s)	210
EarI	CTCTTC	2 cut(s)	316, 1051
EciI	GGCGGA	1 cut(s)	562
Eco130I	CCWWGG	1 cut(s)	36
Eco24I	GRGCYC	1 cut(s)	663
Eco57I	CTGAAG	1 cut(s)	272
Eco81I	CCTNAGG	1 cut(s)	146
EcoNI	CCTNNNNNAGG	1 cut(s)	1101
EcoRI	GAATTC	2 cut(s)	109, 742
EcoRII	CCWGG	4 cut(s)	596, 655, 1233, 1300
EcoT14I	CCWWGG	1 cut(s)	36
EcoT22I	ATGCAT	2 cut(s)	780, 829
EcoT38I	GRGCYC	1 cut(s)	663
ErhI	CCWWGG	1 cut(s)	36
Esp3I	CGTCTC	1 cut(s)	1336
FaeI	CATG	2 cut(s)	13, 706
FatI	CATG	2 cut(s)	9, 702
FauI	CCCGC	1 cut(s)	157
FauNDI	CATATG	1 cut(s)	888
FbaI	TGATCA	1 cut(s)	727
FblI	GTMKAC	1 cut(s)	1254
Fnu4HI	GCNGC	7 cut(s)	162, 172, 175, 227, 392, 816, 1184
FriOI	GRGCYC	1 cut(s)	663
Fsp4HI	GCNGC	7 cut(s)	162, 172, 175, 227, 392, 816, 1184
FspBI	CTAG	4 cut(s)	26, 53, 999, 1013
GlaI	GCGC	2 cut(s)	242, 819
GluI	GCNGC	7 cut(s)	162, 172, 175, 227, 392, 816, 1184
GsaI	CCCAGC	1 cut(s)	1020
GsuI	CTGGAG	1 cut(s)	1328
HaeIII	GGCC	5 cut(s)	297, 391, 655, 815, 1011
HapII	CCGG	4 cut(s)	395, 578, 983, 1344
HgaI	GACGC	1 cut(s)	905
HhaI	GCGC	2 cut(s)	243, 820
Hin1II	CATG	2 cut(s)	13, 706
Hin6I	GCGC	2 cut(s)	241, 818
HinP1I	GCGC	2 cut(s)	241, 818
HincII	GTYRAC	3 cut(s)	674, 1093, 1240
HindII	GTYRAC	3 cut(s)	674, 1093, 1240
HindIII	AAGCTT	2 cut(s)	284, 424
HinfI	GANTC	7 cut(s)	205, 400, 502, 670, 904, 1021, 1315
HpaI	GTTAAC	1 cut(s)	1240
HpaII	CCGG	4 cut(s)	395, 578, 983, 1344
HphI	GGTGA	2 cut(s)	463, 601
Hpy166II	GTNNAC	5 cut(s)	73, 674, 1093, 1240, 1255
Hpy188I	TCNGA	6 cut(s)	249, 501, 510, 633, 836, 1270
Hpy188III	TCNNGA	3 cut(s)	253, 1074, 1176
Hpy8I	GTNNAC	5 cut(s)	73, 674, 1093, 1240, 1255
Hpy99I	CGWCG	6 cut(s)	106, 216, 586, 899, 979, 982
HpyAV	CCTTC	1 cut(s)	56
HpyCH4III	ACNGT	4 cut(s)	22, 191, 586, 1213
HpyCH4IV	ACGT	1 cut(s)	974
HpyF10VI	GCNNNNNNNGC	3 cut(s)	824, 1107, 1192
HpyF3I	CTNAG	7 cut(s)	146, 366, 630, 833, 852, 1025, 1102
HpySE526I	ACGT	1 cut(s)	974
Hsp92II	CATG	2 cut(s)	13, 706
HspAI	GCGC	2 cut(s)	241, 818
KroI	GCCGGC	1 cut(s)	577
KroNI	GCCGGC	1 cut(s)	579
Ksp22I	TGATCA	1 cut(s)	727
KspAI	GTTAAC	1 cut(s)	1240
Kzo9I	GATC	8 cut(s)	249, 259, 568, 727, 836, 883, 930, 1031
LguI	GCTCTTC	1 cut(s)	1051
LmnI	GCTCC	2 cut(s)	496, 1309
Lsp1109I	GCAGC	2 cut(s)	173, 1170
LweI	GCATC	5 cut(s)	19, 206, 384, 765, 836
MaeI	CTAG	4 cut(s)	26, 53, 999, 1013
MaeII	ACGT	1 cut(s)	974
MaeIII	GTNAC	2 cut(s)	331, 1135
MalI	GATC	8 cut(s)	251, 261, 570, 729, 838, 885, 932, 1033
MbiI	CCGCTC	1 cut(s)	370
MboI	GATC	8 cut(s)	249, 259, 568, 727, 836, 883, 930, 1031
MboII	GAAGA	6 cut(s)	333, 432, 706, 781, 813, 1038
MflI	RGATCY	1 cut(s)	836
MhlI	GDGCHC	3 cut(s)	663, 949, 1006
MluCI	AATT	8 cut(s)	86, 109, 232, 486, 664, 742, 1215, 1219
MlyI	GAGTC	3 cut(s)	199, 679, 1309
MmeI	TCCRAC	1 cut(s)	227
MnlI	CCTC	9 cut(s)	271, 287, 317, 466, 524, 858, 861, 921, 1264
Mph1103I	ATGCAT	2 cut(s)	780, 829
MroNI	GCCGGC	1 cut(s)	577
MroXI	GAANNNNTTC	2 cut(s)	89, 871
MseI	TTAA	4 cut(s)	456, 716, 1218, 1239
MslI	CAYNNNNRTG	2 cut(s)	213, 303
MspA1I	CMGCKG	2 cut(s)	164, 566
MspI	CCGG	4 cut(s)	395, 578, 983, 1344
MspR9I	CCNGG	5 cut(s)	396, 598, 657, 1235, 1302
Mva1269I	GAATGC	1 cut(s)	135
MvaI	CCWGG	4 cut(s)	598, 657, 1235, 1302
MvnI	CGCG	1 cut(s)	818
MwoI	GCNNNNNNNGC	3 cut(s)	824, 1107, 1192
NaeI	GCCGGC	1 cut(s)	579
NciI	CCSGG	1 cut(s)	396
NdeI	CATATG	1 cut(s)	888
NdeII	GATC	8 cut(s)	249, 259, 568, 727, 836, 883, 930, 1031
NgoMIV	GCCGGC	1 cut(s)	577
NlaIII	CATG	2 cut(s)	13, 706
NlaIV	GGNNCC	2 cut(s)	420, 946
NmeAIII	GCCGAG	1 cut(s)	202
NsiI	ATGCAT	2 cut(s)	780, 829
NspI	RCATGY	1 cut(s)	706
PaqCI	CACCTGC	2 cut(s)	439, 927
PciI	ACATGT	1 cut(s)	702
PciSI	GCTCTTC	1 cut(s)	1051
PcsI	WCGNNNNNNNCGW	1 cut(s)	1326
PctI	GAATGC	1 cut(s)	135
PdiI	GCCGGC	1 cut(s)	579
PdmI	GAANNNNTTC	2 cut(s)	89, 871
PfeI	GAWTC	4 cut(s)	400, 502, 904, 1021
PkrI	GCNGC	7 cut(s)	163, 173, 176, 228, 393, 817, 1185
PleI	GAGTC	3 cut(s)	199, 678, 1309
PpsI	GAGTC	3 cut(s)	199, 678, 1309
PscI	ACATGT	1 cut(s)	702
PshBI	ATTAAT	1 cut(s)	1218
PsiI	TTATAA	1 cut(s)	1121
Psp6I	CCWGG	4 cut(s)	596, 655, 1233, 1300
PspFI	CCCAGC	1 cut(s)	1016
PspGI	CCWGG	4 cut(s)	596, 655, 1233, 1300
PspN4I	GGNNCC	2 cut(s)	420, 946
PstI	CTGCAG	1 cut(s)	1153
PsuI	RGATCY	1 cut(s)	836
PvuII	CAGCTG	1 cut(s)	566
RsaI	GTAC	3 cut(s)	24, 72, 997
RsaNI	GTAC	3 cut(s)	23, 71, 996
RseI	CAYNNNNRTG	2 cut(s)	213, 303
SapI	GCTCTTC	1 cut(s)	1051
SaqAI	TTAA	4 cut(s)	456, 716, 1218, 1239
SatI	GCNGC	7 cut(s)	162, 172, 175, 227, 392, 816, 1184
Sau3AI	GATC	8 cut(s)	249, 259, 568, 727, 836, 883, 930, 1031
SchI	GAGTC	3 cut(s)	199, 679, 1309
ScrFI	CCNGG	5 cut(s)	396, 598, 657, 1235, 1302
SduI	GDGCHC	3 cut(s)	663, 949, 1006
SfaNI	GCATC	5 cut(s)	19, 206, 384, 765, 836
SfcI	CTRYAG	1 cut(s)	1149
SmiMI	CAYNNNNRTG	2 cut(s)	213, 303
SpeI	ACTAGT	1 cut(s)	998
Sse9I	AATT	8 cut(s)	86, 109, 232, 486, 664, 742, 1215, 1219
SsiI	CCGC	9 cut(s)	164, 171, 174, 226, 370, 392, 479, 547, 816
SspMI	CTAG	4 cut(s)	26, 53, 999, 1013
StyD4I	CCNGG	5 cut(s)	394, 596, 655, 1233, 1300
StyI	CCWWGG	1 cut(s)	36
TaaI	ACNGT	4 cut(s)	22, 191, 586, 1213
TaiI	ACGT	1 cut(s)	977
TaqI	TCGA	7 cut(s)	179, 252, 319, 408, 668, 710, 1340
TasI	AATT	8 cut(s)	86, 109, 232, 486, 664, 742, 1215, 1219
TatI	WGTACW	2 cut(s)	22, 995
TauI	GCSGC	5 cut(s)	174, 177, 229, 394, 818
TfiI	GAWTC	4 cut(s)	400, 502, 904, 1021
Tru1I	TTAA	4 cut(s)	456, 716, 1218, 1239
Tru9I	TTAA	4 cut(s)	456, 716, 1218, 1239
TscAI	CASTG	1 cut(s)	86
TseI	GCWGC	2 cut(s)	161, 1183
TspDTI	ATGAA	5 cut(s)	494, 511, 864, 905, 1038
TspGWI	ACGGA	1 cut(s)	119
TspRI	CASTG	1 cut(s)	86
VspI	ATTAAT	1 cut(s)	1218
XagI	CCTNNNNNAGG	1 cut(s)	1101
XapI	RAATTY	3 cut(s)	109, 232, 742
XceI	RCATGY	1 cut(s)	706
XmiI	GTMKAC	1 cut(s)	1254
XmnI	GAANNNNTTC	2 cut(s)	89, 871
XspI	CTAG	4 cut(s)	26, 53, 999, 1013
Zsp2I	ATGCAT	2 cut(s)	780, 829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.