Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000119.1

Orthogroup ID

OG0011200

Physical Location & Seq

Genomic Coordinates Forward (+)

137222 .. 141854

Gene Structure 4633 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000119.1_g000034.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2838 bp

atggtggacttcgtctggaagaagcggagtgctttaatggcgaggtcgttggttttgccggtggagagtttcagggccacggtgtttccgattgtgtatgccgttaaggctgtggcctccggttccgtcgaggtcataaggaagctatccaagtcttctggtagttctaatgcgactattgtggatagtaatgccgagaggttcgtcggagtttcggatgtggtgacgcatttggtgccctttttggcctcgtctttggatccagctttgatttttgaggtggggattgacatgttgtacttggctgatgttcctggtgggaagcctgagtgggcttcgcaatcgattattgcaattctcacactttgggataggcaagagtttgcttctgctagggaaagtattgttagagctgttgttaccaaccttcatcttctcgatcttcatatgcaggtttcattgtttaagaggctgcttcttatggtgagaaacttgagggcagaatcagatcgcatgcatgcgttagcatgtatttgtcgaacagcgctttgtgttgatctatttgcaaaggaaagtgtccgaagaggccagaaacctcttgctggaactgatatagcctcactttttgaggatgcaagaataaaagatgatcttaatagtgtgaccagcaagaccttatttagggaggagttagtagcatcattggtagagagttgctttcagttgtctctacctttgcctgaacaaaagaactcagggatggagagcagagttattggagccttggcatatggaactggttatggtgcactaaattggacagagcctgctctggaagtcgtggaggtttgcagaccatgtgtcaaatgggattgtgatggccggacttatgcaattgattgctatttgaagttacttgttaggctttgccatatctacgatacaaggggaggtgtaaaaagagtaaaagacggggcttcacaggaccaaattttaaatgagacaaggttgcagaacttgcaacgtgaacttgtgaaaggtctacgtgaggtgaataccccaagaatatgtgctcgcgtaatttgggctatctcagagcacatagacttagaagggttggatccgctgctggctgatgatcctgaggatccactgaacattattattttgaatatccacaaggttttgttcgacatagattcatcttcagattcgacaaataggcttctggatgttcaggcagttttattatgtgctcagcggttgggatcacgcaacgctagggctggacagatactgactaaagaactcgaagagttcaggagcagtagtatggctgattcagtaaacaagcatcagtgccgtatgatattgcagagactcaagtatgcttcaagccatccagaacgcaggtggccaggagttacggaagccagaggtgattacccattcagccaccataaactaactgttcagttctacgaagtagctgcagctcaggatagaaaattagaaggattggttcataatgctatattagagctttggaggccagaacctagtgaactaactcttctgttgacaaaaggagttgagtctactttactcaaggttcctcctactgcaactactttgaccggtagcagtgatccctgctacattgaagcatatcatttggcagattctagtgatggaaggatatctttgcatttgaaggtcttaaacttaactgagcttgaactcaatcgggttgatattcgagttgggttatctggttcactgtattttatggatgggtctccacaagcagttcggcaattgcgtaaccttgtttcgcaggatccagtactctgcagtgtaactgtgggtgtctcccattttgaaagatgcgccctttgggttcaagtcttatactaccccttctatggaagtggtgcagcttcagattatgaaggtgactactctgaagaagatccacaaatcatgagacagaagagaagtttaaggcctgaactgggagagcctgtcattttgaggtgtcagccatacaagattccgttgaccgagctactaaccccacataaaatctcaccagttgaatttttccggctgtggcccagtttaccagccattgttgagtacactggtacatatacctatgaaggaagtggcttcaaggctactgctgctcagcagtatggagcatctcctttcctaagtgggctgaaatccttgtcatcaaaaccattccacagagtttgttcacatgttattcggacagtagcaggatttcagctttgttttgccgcaaaaacttggtatggtggcttcttgggcatgatgatctttggagctagtgaagtgagccggaatgtcgaccttggtgatgagactacgaccatgatttgcaaatttgttgttcgagcttctgatgcatcaattacgaaggagattggatcagatctacagggctggttggatgatctcactgatgggggtgttgagtacatgcctgaagatgaagtgaaggtggctgctgctgagaggcttaggatctcaatggaacgaatagcattgctaaaggcagccgaacctaaaaagactcccaaatctgatgacgaggacgaagaagaagaagacagtgatgatgaagatgactttatgacaaagaaaaagaaggaaaagaaaaaagatggtgaggaggaagatggcaagaaaaagggacctacaaccttgtccaaattgactgcagaggaggctgaacaccgtgctcttcaacaagcagtgctccaagagtggtatacattgtgtaaagatagagctgcaaaagtaaattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006897 GO:0007275 GO:0008150 GO:0009504 GO:0009506 GO:0009524 GO:0009555 GO:0016020 GO:0016192 GO:0030054 GO:0032501 GO:0032502 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0055044 GO:0071944 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

945

Amino Acids

105.45

Weight (kDa)

5.68

Isoelectric Point (pI)

44.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01780 AT3G01780
fragaria_vesca	FvH4_5g15940
malus_domestica	MD06G1184100.v1.1 MD14G1190000.v1.1
prunus_persica	Prupe.5G183000_v2.0.a1
pyrus_communis	pycom06g16320 pycom06g16330 pycom14g15780
rosa_chinensis	RchiOBHm_Chr7g0180111
rosa_laevigata	RLG00000005292
rosa_multiflora	Rmu_sc0017616.1_g000007 Rmu_ssc0000119.1_g000034
rosa_roxburghii	Rroxscaffold_3G00273120
rosa_rugosa	Rorug06G0430700
rosa_samantha	Rh7AG031100 Rh7BG031000 Rh7CG033000 Rh7DG031600
rosa_wichuraiana	Rw7G002580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1401
Acc36I	ACCTGC	2 cut(s)	442, 1401
AccB1I	GGYRCC	1 cut(s)	235
AccI	GTMKAC	4 cut(s)	1042, 1598, 2376, 2801
AccII	CGCG	1 cut(s)	1077
AciI	CCGC	4 cut(s)	25, 1124, 1261, 2307
AcoI	YGGCCR	2 cut(s)	880, 1415
AcsI	RAATTY	3 cut(s)	990, 2099, 2411
AcuI	CTGAAG	4 cut(s)	1191, 1926, 1986, 2535
AfaI	GTAC	5 cut(s)	299, 1848, 2141, 2149, 2507
AfeI	AGCGCT	1 cut(s)	546
AfiI	CCNNNNNNNGG	4 cut(s)	602, 681, 1925, 2015
AflIII	ACRYGT	2 cut(s)	291, 2266
AgeI	ACCGGT	1 cut(s)	1637
AhdI	GACNNNNNGTC	1 cut(s)	860
AjnI	CCWGG	2 cut(s)	313, 1417
Alw21I	GWGCWC	6 cut(s)	811, 1075, 1101, 1258, 2773, 2790
Alw26I	GTCTC	7 cut(s)	732, 995, 1372, 1803, 1876, 1981, 2384
Alw44I	GTGCAC	1 cut(s)	807
AlwNI	CAGNNNCTG	2 cut(s)	827, 1297
Aor51HI	AGCGCT	1 cut(s)	546
AoxI	GGCC	9 cut(s)	75, 114, 246, 586, 880, 1415, 1550, 2006, 2114
ApaLI	GTGCAC	1 cut(s)	807
ApoI	RAATTY	3 cut(s)	990, 2099, 2411
AsiGI	ACCGGT	1 cut(s)	1637
AspLEI	GCGC	2 cut(s)	547, 1892
AspS9I	GGNCC	4 cut(s)	75, 985, 2115, 2723
AsuHPI	GGTGA	8 cut(s)	235, 496, 1063, 1451, 1967, 2082, 2396, 2708
AvaII	GGWCC	2 cut(s)	985, 2723
AxyI	CCTNAGG	1 cut(s)	1143
BaeGI	GKGCMC	2 cut(s)	240, 811
BalI	TGGCCA	1 cut(s)	1417
BamHI	GGATCC	4 cut(s)	259, 1120, 1147, 1840
BanI	GGYRCC	1 cut(s)	235
BarI	GAAGNNNNNNTAC	2 cut(s)	2312, 2344
BbsI	GAAGAC	2 cut(s)	147, 2643
Bbv12I	GWGCWC	6 cut(s)	811, 1075, 1101, 1258, 2773, 2790
BccI	CCATC	8 cut(s)	754, 872, 1407, 1685, 1787, 2486, 2687, 2702
BceAI	ACGGC	2 cut(s)	86, 1347
BcgI	CGANNNNNNTGC	2 cut(s)	1472, 1506
BciT130I	CCWGG	2 cut(s)	315, 1419
BcoDI	GTCTC	7 cut(s)	732, 995, 1372, 1803, 1876, 1981, 2384
BfaI	CTAG	5 cut(s)	393, 1281, 1560, 1686, 2355
BfmI	CTRYAG	4 cut(s)	1491, 1852, 2465, 2748
BfoI	RGCGCY	1 cut(s)	548
BfuAI	ACCTGC	2 cut(s)	442, 1401
BglI	GCCNNNNNGGC	1 cut(s)	107
BglII	AGATCT	1 cut(s)	2461
BlpI	GCTNAGC	2 cut(s)	1257, 2190
BmcAI	AGTACT	1 cut(s)	1848
Bme1390I	CCNGG	2 cut(s)	315, 1419
Bme18I	GGWCC	2 cut(s)	985, 2723
BmeRI	GACNNNNNGTC	1 cut(s)	860
BmgT120I	GGNCC	4 cut(s)	75, 985, 2115, 2723
BmiI	GGNNCC	9 cut(s)	124, 237, 261, 781, 1122, 1149, 1614, 1842, 2724
BmrFI	CCNGG	2 cut(s)	315, 1419
BmrI	ACTGGG	2 cut(s)	2024, 2112
BmsI	GCATC	7 cut(s)	622, 707, 1363, 1877, 2213, 2422, 2444
BmuI	ACTGGG	2 cut(s)	2024, 2112
BpiI	GAAGAC	2 cut(s)	147, 2643
Bpu10I	CCTNAGC	2 cut(s)	1497, 2549
Bpu1102I	GCTNAGC	2 cut(s)	1257, 2190
BpuEI	CTTGAG	3 cut(s)	514, 1367, 1592
Bsa29I	ATCGAT	1 cut(s)	344
BsaAI	YACGTR	1 cut(s)	1046
BsaI	GGTCTC	1 cut(s)	1803
BsaJI	CCNNGG	3 cut(s)	78, 783, 2380
BsaWI	WCCGGW	2 cut(s)	119, 1637
BsaXI	ACNNNNNCTCC	4 cut(s)	1315, 1345, 2010, 2040
Bsc4I	CCNNNNNNNGG	4 cut(s)	602, 681, 1925, 2015
Bse118I	RCCGGY	2 cut(s)	58, 1637
Bse1I	ACTGG	6 cut(s)	802, 1844, 2019, 2093, 2118, 2149
Bse21I	CCTNAGG	1 cut(s)	1143
Bse3DI	GCAATG	1 cut(s)	2573
BseBI	CCWGG	2 cut(s)	315, 1419
BseCI	ATCGAT	1 cut(s)	344
BseDI	CCNNGG	3 cut(s)	78, 783, 2380
BseGI	GGATG	7 cut(s)	223, 637, 765, 1237, 1399, 1798, 2485
BseLI	CCNNNNNNNGG	4 cut(s)	602, 681, 1925, 2015
BseMI	GCAATG	1 cut(s)	2573
BseMII	CTCAG	9 cut(s)	318, 768, 1107, 1134, 1271, 1511, 1722, 2204, 2532
BseNI	ACTGG	6 cut(s)	802, 1844, 2019, 2093, 2118, 2149
BseRI	GAGGAG	3 cut(s)	701, 2714, 2768
BseSI	GKGCMC	2 cut(s)	240, 811
BsgI	GTGCAG	1 cut(s)	1956
Bsh1236I	CGCG	1 cut(s)	1077
BshFI	GGCC	9 cut(s)	77, 116, 248, 588, 882, 1417, 1552, 2008, 2116
BshNI	GGYRCC	1 cut(s)	235
BshTI	ACCGGT	1 cut(s)	1637
BshVI	ATCGAT	1 cut(s)	344
BsiHKAI	GWGCWC	6 cut(s)	811, 1075, 1101, 1258, 2773, 2790
BsiSI	CCGG	6 cut(s)	59, 120, 883, 1638, 2107, 2368
BslFI	GGGAC	1 cut(s)	2736
BslI	CCNNNNNNNGG	4 cut(s)	602, 681, 1925, 2015
BsmAI	GTCTC	7 cut(s)	732, 995, 1372, 1803, 1876, 1981, 2384
BsmFI	GGGAC	1 cut(s)	2736
BsnI	GGCC	9 cut(s)	77, 116, 248, 588, 882, 1417, 1552, 2008, 2116
Bso31I	GGTCTC	1 cut(s)	1803
Bsp1286I	GDGCHC	7 cut(s)	240, 811, 1075, 1101, 1258, 2773, 2790
Bsp1720I	GCTNAGC	2 cut(s)	1257, 2190
BspACI	CCGC	4 cut(s)	25, 1124, 1261, 2307
BspANI	GGCC	9 cut(s)	77, 116, 248, 588, 882, 1417, 1552, 2008, 2116
BspCNI	CTCAG	9 cut(s)	319, 767, 1106, 1135, 1270, 1510, 1723, 2203, 2533
BspDI	ATCGAT	1 cut(s)	344
BspFNI	CGCG	1 cut(s)	1077
BspHI	TCATGA	1 cut(s)	1983
BspLI	GGNNCC	9 cut(s)	124, 237, 261, 781, 1122, 1149, 1614, 1842, 2724
BspMAI	CTGCAG	3 cut(s)	1495, 1856, 2752
BspMI	ACCTGC	2 cut(s)	442, 1401
BspQI	GCTCTTC	1 cut(s)	2778
BspT107I	GGYRCC	1 cut(s)	235
BspTNI	GGTCTC	1 cut(s)	1803
BsrDI	GCAATG	1 cut(s)	2573
BsrFI	RCCGGY	2 cut(s)	58, 1637
BsrI	ACTGG	6 cut(s)	802, 1844, 2019, 2093, 2118, 2149
BssAI	RCCGGY	2 cut(s)	58, 1637
BssECI	CCNNGG	3 cut(s)	78, 783, 2380
BssNAI	GTATAC	1 cut(s)	2802
BssT1I	CCWWGG	2 cut(s)	783, 2380
Bst1107I	GTATAC	1 cut(s)	2802
Bst2UI	CCWGG	2 cut(s)	315, 1419
Bst4CI	ACNGT	7 cut(s)	82, 1471, 1782, 1864, 2281, 2642, 2768
Bst6I	CTCTTC	5 cut(s)	577, 1308, 1578, 1988, 2778
BstAPI	GCANNNNNTGC	2 cut(s)	235, 1018
BstBAI	YACGTR	1 cut(s)	1046
BstC8I	GCNNGC	5 cut(s)	515, 519, 828, 1075, 1131
BstDSI	CCRYGG	1 cut(s)	78
BstENI	CCTNNNNNAGG	1 cut(s)	679
BstF5I	GGATG	7 cut(s)	223, 637, 765, 1237, 1399, 1798, 2485
BstFNI	CGCG	1 cut(s)	1077
BstH2I	RGCGCY	1 cut(s)	548
BstHHI	GCGC	2 cut(s)	547, 1892
BstMAI	GTCTC	7 cut(s)	732, 995, 1372, 1803, 1876, 1981, 2384
BstMWI	GCNNNNNNNGC	9 cut(s)	38, 107, 235, 1018, 1549, 2186, 2334, 2432, 2756
BstNI	CCWGG	2 cut(s)	315, 1419
BstNSI	RCATGY	6 cut(s)	295, 517, 521, 531, 2270, 2512
BstSCI	CCNGG	2 cut(s)	313, 1417
BstSFI	CTRYAG	4 cut(s)	1491, 1852, 2465, 2748
BstSLI	GKGCMC	2 cut(s)	240, 811
BstUI	CGCG	1 cut(s)	1077
BstV2I	GAAGAC	2 cut(s)	147, 2643
BstX2I	RGATCY	7 cut(s)	259, 1120, 1147, 1840, 1972, 2461, 2553
BstYI	RGATCY	7 cut(s)	259, 1120, 1147, 1840, 1972, 2461, 2553
BstZ17I	GTATAC	1 cut(s)	2802
Bsu15I	ATCGAT	1 cut(s)	344
Bsu36I	CCTNAGG	1 cut(s)	1143
BsuRI	GGCC	9 cut(s)	77, 116, 248, 588, 882, 1417, 1552, 2008, 2116
BsuTUI	ATCGAT	1 cut(s)	344
BtgI	CCRYGG	1 cut(s)	78
BtsCI	GGATG	7 cut(s)	223, 637, 765, 1237, 1399, 1798, 2485
BtsI	GCAGTG	3 cut(s)	1651, 1861, 2790
BtsIMutI	CAGTG	9 cut(s)	1151, 1364, 1651, 1778, 1861, 2142, 2487, 2647, 2790
BveI	ACCTGC	2 cut(s)	442, 1401
Cac8I	GCNNGC	5 cut(s)	515, 519, 828, 1075, 1131
CaiI	CAGNNNCTG	2 cut(s)	827, 1297
CciI	TCATGA	1 cut(s)	1983
CfoI	GCGC	2 cut(s)	547, 1892
Cfr10I	RCCGGY	2 cut(s)	58, 1637
Cfr13I	GGNCC	4 cut(s)	75, 985, 2115, 2723
ClaI	ATCGAT	1 cut(s)	344
CseI	GACGC	1 cut(s)	235
Csp6I	GTAC	5 cut(s)	298, 1847, 2140, 2148, 2506
CspAI	ACCGGT	1 cut(s)	1637
CspCI	CAANNNNNGTGG	2 cut(s)	2240, 2275
CviQI	GTAC	5 cut(s)	298, 1847, 2140, 2148, 2506
DraI	TTTAAA	1 cut(s)	996
DriI	GACNNNNNGTC	1 cut(s)	860
EaeI	YGGCCR	2 cut(s)	880, 1415
Eam1104I	CTCTTC	5 cut(s)	577, 1308, 1578, 1988, 2778
Eam1105I	GACNNNNNGTC	1 cut(s)	860
EarI	CTCTTC	5 cut(s)	577, 1308, 1578, 1988, 2778
Eco130I	CCWWGG	2 cut(s)	783, 2380
Eco147I	AGGCCT	1 cut(s)	2008
Eco31I	GGTCTC	1 cut(s)	1803
Eco32I	GATATC	1 cut(s)	1701
Eco47I	GGWCC	2 cut(s)	985, 2723
Eco47III	AGCGCT	1 cut(s)	546
Eco57I	CTGAAG	4 cut(s)	1191, 1926, 1986, 2535
Eco81I	CCTNAGG	1 cut(s)	1143
EcoNI	CCTNNNNNAGG	1 cut(s)	679
EcoO109I	RGGNCCY	1 cut(s)	2723
EcoRII	CCWGG	2 cut(s)	313, 1417
EcoRV	GATATC	1 cut(s)	1701
EcoT14I	CCWWGG	2 cut(s)	783, 2380
EcoT22I	ATGCAT	2 cut(s)	519, 2437
ErhI	CCWWGG	2 cut(s)	783, 2380
FalI	AAGNNNNNCTT	4 cut(s)	636, 668, 1687, 1719
FaqI	GGGAC	1 cut(s)	2736
FauNDI	CATATG	2 cut(s)	447, 790
FblI	GTMKAC	4 cut(s)	1042, 1598, 2376, 2801
FokI	GGATG	7 cut(s)	230, 644, 772, 1244, 1386, 1805, 2492
FspBI	CTAG	5 cut(s)	393, 1281, 1560, 1686, 2355
GlaI	GCGC	2 cut(s)	546, 1891
HaeII	RGCGCY	1 cut(s)	548
HaeIII	GGCC	9 cut(s)	77, 116, 248, 588, 882, 1417, 1552, 2008, 2116
HapII	CCGG	6 cut(s)	59, 120, 883, 1638, 2107, 2368
HgaI	GACGC	1 cut(s)	235
HhaI	GCGC	2 cut(s)	547, 1892
Hin6I	GCGC	2 cut(s)	545, 1890
HinP1I	GCGC	2 cut(s)	545, 1890
HincII	GTYRAC	3 cut(s)	1581, 2061, 2377
HindII	GTYRAC	3 cut(s)	1581, 2061, 2377
HinfI	GANTC	9 cut(s)	503, 1199, 1211, 1340, 1380, 1595, 1682, 2053, 2602
HpaII	CCGG	6 cut(s)	59, 120, 883, 1638, 2107, 2368
HphI	GGTGA	8 cut(s)	235, 496, 1063, 1451, 1967, 2082, 2396, 2708
Hpy188III	TCNNGA	9 cut(s)	16, 437, 833, 1142, 1229, 1321, 1403, 1499, 1984
Hpy99I	CGWCG	2 cut(s)	131, 209
HpyCH4III	ACNGT	7 cut(s)	82, 1471, 1782, 1864, 2281, 2642, 2768
HpyCH4IV	ACGT	2 cut(s)	1024, 1045
HpyF10VI	GCNNNNNNNGC	9 cut(s)	38, 107, 235, 1018, 1549, 2186, 2334, 2432, 2756
HpySE526I	ACGT	2 cut(s)	1024, 1045
HspAI	GCGC	2 cut(s)	545, 1890
LguI	GCTCTTC	1 cut(s)	2778
LmnI	GCTCC	5 cut(s)	779, 1323, 2201, 2351, 2793
LweI	GCATC	7 cut(s)	622, 707, 1363, 1877, 2213, 2422, 2444
MaeI	CTAG	5 cut(s)	393, 1281, 1560, 1686, 2355
MaeII	ACGT	2 cut(s)	1024, 1045
MaeIII	GTNAC	8 cut(s)	223, 418, 661, 912, 1423, 1823, 1858, 1955
MfeI	CAATTG	2 cut(s)	894, 1817
MflI	RGATCY	7 cut(s)	259, 1120, 1147, 1840, 1972, 2461, 2553
MhlI	GDGCHC	7 cut(s)	240, 811, 1075, 1101, 1258, 2773, 2790
MlsI	TGGCCA	1 cut(s)	1417
MluNI	TGGCCA	1 cut(s)	1417
MlyI	GAGTC	3 cut(s)	1374, 1604, 2596
MmeI	TCCRAC	3 cut(s)	187, 1098, 2457
Mox20I	TGGCCA	1 cut(s)	1417
Mph1103I	ATGCAT	2 cut(s)	519, 2437
MscI	TGGCCA	1 cut(s)	1417
MseI	TTAA	8 cut(s)	35, 105, 465, 654, 995, 1721, 1727, 2003
Msp20I	TGGCCA	1 cut(s)	1417
MspA1I	CMGCKG	2 cut(s)	1126, 1261
MspI	CCGG	6 cut(s)	59, 120, 883, 1638, 2107, 2368
MspR9I	CCNGG	2 cut(s)	315, 1419
MunI	CAATTG	2 cut(s)	894, 1817
MvaI	CCWGG	2 cut(s)	315, 1419
MvnI	CGCG	1 cut(s)	1077
MwoI	GCNNNNNNNGC	9 cut(s)	38, 107, 235, 1018, 1549, 2186, 2334, 2432, 2756
NdeI	CATATG	2 cut(s)	447, 790
NlaIV	GGNNCC	9 cut(s)	124, 237, 261, 781, 1122, 1149, 1614, 1842, 2724
NmeAIII	GCCGAG	1 cut(s)	220
NmuCI	GTSAC	3 cut(s)	223, 661, 1955
NsiI	ATGCAT	2 cut(s)	519, 2437
NspI	RCATGY	6 cut(s)	295, 517, 521, 531, 2270, 2512
PaeI	GCATGC	2 cut(s)	517, 521
PagI	TCATGA	1 cut(s)	1983
PaqCI	CACCTGC	1 cut(s)	1401
PceI	AGGCCT	1 cut(s)	2008
PciI	ACATGT	2 cut(s)	291, 2266
PciSI	GCTCTTC	1 cut(s)	2778
PcsI	WCGNNNNNNNCGW	2 cut(s)	86, 1819
PfeI	GAWTC	6 cut(s)	503, 1199, 1211, 1340, 1682, 2053
PflFI	GACNNNGTC	1 cut(s)	11
PinAI	ACCGGT	1 cut(s)	1637
PleI	GAGTC	3 cut(s)	1374, 1603, 2596
PpsI	GAGTC	3 cut(s)	1374, 1603, 2596
Ppu21I	YACGTR	1 cut(s)	1046
PpuMI	RGGWCCY	1 cut(s)	2723
PscI	ACATGT	2 cut(s)	291, 2266
Psp5II	RGGWCCY	1 cut(s)	2723
Psp6I	CCWGG	2 cut(s)	313, 1417
PspGI	CCWGG	2 cut(s)	313, 1417
PspN4I	GGNNCC	9 cut(s)	124, 237, 261, 781, 1122, 1149, 1614, 1842, 2724
PspPI	GGNCC	4 cut(s)	75, 985, 2115, 2723
PspPPI	RGGWCCY	1 cut(s)	2723
PstI	CTGCAG	3 cut(s)	1495, 1856, 2752
PstNI	CAGNNNCTG	2 cut(s)	827, 1297
PsuI	RGATCY	7 cut(s)	259, 1120, 1147, 1840, 1972, 2461, 2553
PsyI	GACNNNGTC	1 cut(s)	11
RsaI	GTAC	5 cut(s)	299, 1848, 2141, 2149, 2507
RsaNI	GTAC	5 cut(s)	298, 1847, 2140, 2148, 2506
SalI	GTCGAC	1 cut(s)	2375
SapI	GCTCTTC	1 cut(s)	2778
SaqAI	TTAA	8 cut(s)	35, 105, 465, 654, 995, 1721, 1727, 2003
Sau96I	GGNCC	4 cut(s)	75, 985, 2115, 2723
ScaI	AGTACT	1 cut(s)	1848
SchI	GAGTC	3 cut(s)	1374, 1604, 2596
ScrFI	CCNGG	2 cut(s)	315, 1419
SduI	GDGCHC	7 cut(s)	240, 811, 1075, 1101, 1258, 2773, 2790
SfaNI	GCATC	7 cut(s)	622, 707, 1363, 1877, 2213, 2422, 2444
SfcI	CTRYAG	4 cut(s)	1491, 1852, 2465, 2748
SinI	GGWCC	2 cut(s)	985, 2723
SmlI	CTYRAG	3 cut(s)	493, 1382, 1607
SmoI	CTYRAG	3 cut(s)	493, 1382, 1607
SphI	GCATGC	2 cut(s)	517, 521
SseBI	AGGCCT	1 cut(s)	2008
SsiI	CCGC	4 cut(s)	25, 1124, 1261, 2307
SspMI	CTAG	5 cut(s)	393, 1281, 1560, 1686, 2355
StuI	AGGCCT	1 cut(s)	2008
StyD4I	CCNGG	2 cut(s)	313, 1417
StyI	CCWWGG	2 cut(s)	783, 2380
TaaI	ACNGT	7 cut(s)	82, 1471, 1782, 1864, 2281, 2642, 2768
TaiI	ACGT	2 cut(s)	1027, 1048
TaqII	GACCGA	1 cut(s)	2078
TatI	WGTACW	4 cut(s)	297, 1846, 2139, 2505
TauI	GCSGC	1 cut(s)	2309
TfiI	GAWTC	6 cut(s)	503, 1199, 1211, 1340, 1682, 2053
Tru1I	TTAA	8 cut(s)	35, 105, 465, 654, 995, 1721, 1727, 2003
Tru9I	TTAA	8 cut(s)	35, 105, 465, 654, 995, 1721, 1727, 2003
TscAI	CASTG	9 cut(s)	1158, 1364, 1651, 1785, 1861, 2149, 2494, 2647, 2790
TseFI	GTSAC	3 cut(s)	223, 661, 1955
Tsp45I	GTSAC	3 cut(s)	223, 661, 1955
TspDTI	ATGAA	9 cut(s)	419, 434, 447, 1191, 1514, 1965, 2175, 2535, 2664
TspGWI	ACGGA	3 cut(s)	115, 1442, 2046
TspRI	CASTG	9 cut(s)	1158, 1364, 1651, 1785, 1861, 2149, 2494, 2647, 2790
Tth111I	GACNNNGTC	1 cut(s)	11
VneI	GTGCAC	1 cut(s)	807
VpaK11BI	GGWCC	2 cut(s)	985, 2723
XagI	CCTNNNNNAGG	1 cut(s)	679
XapI	RAATTY	3 cut(s)	990, 2099, 2411
XceI	RCATGY	6 cut(s)	295, 517, 521, 531, 2270, 2512
XcmI	CCANNNNNNNNNTGG	2 cut(s)	864, 1410
XmiI	GTMKAC	4 cut(s)	1042, 1598, 2376, 2801
XspI	CTAG	5 cut(s)	393, 1281, 1560, 1686, 2355
ZrmI	AGTACT	1 cut(s)	1848
Zsp2I	ATGCAT	2 cut(s)	519, 2437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.