Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000160.1

Orthogroup ID

OG0006681

Physical Location & Seq

Genomic Coordinates Reverse (-)

83016 .. 86672

Gene Structure 3657 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000160.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

atggggttttggtatttgtgtggtggtggaaacagaggtggggttttctggaagaaggagagaagaccggaacgaggagcggttagagagaaacgacgccgcgggtgggcgacccaagtactcggcacccagtcgcatttcctcggcgacgggattaggcgagcttacgaggctagggcttcgaagccgcctcagtacggcttcacccaagacgctttggtcagccggagacagattctccaggccgcctgcgaaaccctagccgaccctgcctccagaagagagtacaatcagtccctcgttgaagacgaagacggaacaattctcaccgacgttccttttgataaggttcctggagctctttgtgtgctgcaagaagctggaaagacggagctggttcttcaaattgggcacagtttgctgagagagaggctgcccaaatcgttcaagcaagatgtggttttggtgatggcacttgcttatgttgacatgtcgagggacgcaatggcattgtccccaccggattttattcagggttgtgaagtgctcgagagggctttgaagctcttgcaggaggaaggtgctagcagccttgcacctgatcttcagtcacaaattgacgagacactggaagagatcaccccacgttgcattttggaacttctaggtttaccccttgatgaggactaccaatcaagaagggaagagggcctccgtggtgtccgaaacatattgtggtctgttggaggaggcggagcagttgctcttgctgggggattcacccgtgacagtttcctgaatgaggtctttttacgaatgactgcagctgaacaggtggaactatatgtattaacaccaaaaaacatcccagccgaaagctttgaagtttatggagtggcgcttgcgcttgttgctcaagcctttgttggtaaaaaacctaatcacattcaagatgctgataacctgttctgggaacttcagcagaataaggtgtcagctgtaggacactctgttaacacctatataaccaatgaaaatagtgagatagactttgctttggagaggggactctgttcacttcttctgggggatcttgatgagtgtcgctcatggttgggcctagacaataataattcaccgtatagaaatccatctgtagtcgattttgtcttggagaatgctaaggatgatgatgacaatgatcttcccggactttgtaagctgttggagacatggttgatggaggtggtattccccagatttagagacaccaaagatattgagttcagccttggtgattattatgatgatcctacagtcttgagatacttagaaaggttggatggaactaatggctcacccttagctgcagcagcagccatagtaaggatcggtgctgaagctactgcagttcttgataatgtcaaggccagtgcaattcaggccctgtggaaggtgtttcctctgggtcaaagagataagaatatgacaactcaagaagatcatgagatgaattattctcttcttcctgaagacagtggagaccctttggaagaatcctatgaagatgattctattcgtgttgctgaggtttctggaagagatggttctgttgacacacttaaagaagaatcaattactgagcaaatcaaagatgcaagtgtgaaaattatgtgtgctggtgtggtaattggactactgacttttgttggattgaagtatttacccggcaggaatagctcatccaatctacgtaaagaacttagttcagtgactgcatctgatgtcattagttcagggttaccagtagatgttaagtctgcagaggatttacccaaaatggacgcacaaattgccgaaggtctagttcggaaatggcagaacataaaatctcaggcttttggacctgggcattccgtggataaattgtcagaggtattggatggtgagatgttgaagatatggacagatcgagcaactgaaattgcacagctaaattggtcctatgattactcccttttgaacttgagcattgacagtgtaacagtgtcgctagatgggcagcgtgctgtggtggaagcaactcttgaagaattagcccaattaactgatgtgctccatccagagcatgatgcctcgaatagcagaacatacactacaagatatgagatgtcttgttcaagctcaggatggaaaatcactgaaggagctgtcctccaatcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009706 GO:0009941 GO:0009987 GO:0010020 GO:0016020 GO:0016021 GO:0016043 GO:0019866 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031352 GO:0031353 GO:0031356 GO:0031357 GO:0031967 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4101

Protein Analysis

741

Amino Acids

81.98

Weight (kDa)

4.67

Isoelectric Point (pI)

46.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42480 AT5G42480
fragaria_vesca	FvH4_2g39070 FvH4_2g39070 FvH4_2g39070 FvH4_2g39070
malus_domestica	MD15G1016900.v1.1
prunus_persica	Prupe.1G370400_v2.0.a1
pyrus_communis	pycom15g01470 pycom15g01490 pycom15g01500
rosa_chinensis	RchiOBHm_Chr6g0302171
rosa_laevigata	RLG00000011189
rosa_multiflora	Rmu_sc0015826.1_g000001 Rmu_sc0025484.1_g000001 Rmu_sc0031609.1_g000001 Rmu_sc0041248.1_g000001 Rmu_ssc0000160.1_g000018
rosa_roxburghii	Rroxscaffold_7G00166020
rosa_rugosa	Rorug06G0312800 Rorug06G0312900
rosa_samantha	Rh6AG425400 Rh6BG477100 Rh6CG438200 Rh6DG425200
rosa_wichuraiana	Rw6G036840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	218
AccB1I	GGYRCC	1 cut(s)	125
AccBSI	CCGCTC	1 cut(s)	80
AccII	CGCG	1 cut(s)	102
AciI	CCGC	6 cut(s)	80, 100, 102, 188, 246, 753
AclWI	GGATC	3 cut(s)	1098, 1304, 1397
AcuI	CTGAAG	5 cut(s)	590, 962, 1419, 1551, 2223
AcyI	GRCGYC	1 cut(s)	97
AfaI	GTAC	3 cut(s)	120, 197, 287
AfiI	CCNNNNNNNGG	8 cut(s)	74, 106, 197, 682, 802, 970, 1386, 1453
AflIII	ACRYGT	1 cut(s)	489
AjnI	CCWGG	3 cut(s)	240, 352, 1906
Alw21I	GWGCWC	3 cut(s)	361, 549, 2118
Alw26I	GTCTC	5 cut(s)	223, 617, 1223, 1260, 1536
AlwI	GGATC	3 cut(s)	1098, 1304, 1397
AlwNI	CAGNNNCTG	2 cut(s)	1447, 1775
Ama87I	CYCGRG	1 cut(s)	548
AoxI	GGCC	5 cut(s)	243, 709, 1117, 1428, 1443
ApeKI	GCWGC	9 cut(s)	370, 433, 588, 824, 1367, 1370, 1373, 1376, 2062
ArsI	GACNNNNNNTTYG	2 cut(s)	323, 355
AspLEI	GCGC	2 cut(s)	901, 907
AspS9I	GGNCC	5 cut(s)	709, 1117, 1444, 1904, 2001
AsuC2I	CCSGG	2 cut(s)	1209, 1728
AsuHPI	GGTGA	9 cut(s)	196, 319, 478, 631, 772, 1128, 1307, 1350, 1958
AsuII	TTCGAA	1 cut(s)	182
AsuNHI	GCTAGC	1 cut(s)	584
AvaI	CYCGRG	1 cut(s)	548
AvaII	GGWCC	2 cut(s)	1904, 2001
BaeGI	GKGCMC	1 cut(s)	414
BanI	GGYRCC	1 cut(s)	125
BanII	GRGCYC	1 cut(s)	361
BbsI	GAAGAC	4 cut(s)	70, 312, 318, 1539
Bbv12I	GWGCWC	3 cut(s)	361, 549, 2118
BbvCI	CCTCAGC	1 cut(s)	1587
BbvI	GCAGC	9 cut(s)	357, 420, 600, 836, 1354, 1382, 1385, 1388, 2074
BccI	CCATC	9 cut(s)	463, 1159, 1234, 1337, 1598, 1937, 2051, 2127, 2184
BceAI	ACGGC	1 cut(s)	214
BciT130I	CCWGG	3 cut(s)	242, 354, 1908
BcnI	CCSGG	2 cut(s)	1209, 1728
BcoDI	GTCTC	5 cut(s)	223, 617, 1223, 1260, 1536
BfaI	CTAG	7 cut(s)	174, 260, 585, 665, 1121, 1865, 2054
BfmI	CTRYAG	7 cut(s)	822, 999, 1155, 1314, 1368, 1407, 1821
BfoI	RGCGCY	1 cut(s)	902
BmcAI	AGTACT	1 cut(s)	120
Bme1390I	CCNGG	5 cut(s)	242, 354, 1209, 1728, 1908
Bme18I	GGWCC	2 cut(s)	1904, 2001
BmeT110I	CYCGRG	1 cut(s)	548
BmgT120I	GGNCC	5 cut(s)	709, 1117, 1444, 1904, 2001
BmiI	GGNNCC	2 cut(s)	127, 351
BmrFI	CCNGG	5 cut(s)	242, 354, 1209, 1728, 1908
BmrI	ACTGGG	1 cut(s)	124
BmsI	GCATC	4 cut(s)	943, 1645, 1787, 2122
BmtI	GCTAGC	1 cut(s)	588
BmuI	ACTGGG	1 cut(s)	124
BpiI	GAAGAC	4 cut(s)	70, 312, 318, 1539
BplI	GAGNNNNNCTC	3 cut(s)	1091, 1123, 2199
BpmI	CTGGAG	3 cut(s)	224, 259, 375
Bpu10I	CCTNAGC	4 cut(s)	1182, 1363, 1587, 2185
Bpu14I	TTCGAA	1 cut(s)	182
BpuEI	CTTGAG	4 cut(s)	900, 1342, 1479, 2047
BpuMI	CCSGG	2 cut(s)	1209, 1728
BsaAI	YACGTR	1 cut(s)	1754
BsaHI	GRCGYC	1 cut(s)	97
BsaI	GGTCTC	1 cut(s)	1536
BsaJI	CCNNGG	6 cut(s)	100, 142, 715, 1291, 1907, 1917
BsaWI	WCCGGW	2 cut(s)	67, 520
BsaXI	ACNNNNNCTCC	6 cut(s)	222, 252, 257, 287, 1220, 1250
Bsc4I	CCNNNNNNNGG	8 cut(s)	74, 106, 197, 682, 802, 970, 1386, 1453
Bse1I	ACTGG	4 cut(s)	130, 633, 1431, 1805
Bse3DI	GCAATG	1 cut(s)	510
BseBI	CCWGG	3 cut(s)	242, 354, 1908
BseDI	CCNNGG	6 cut(s)	100, 142, 715, 1291, 1907, 1917
BseGI	GGATG	7 cut(s)	864, 1192, 1348, 1742, 1948, 2119, 2195
BseLI	CCNNNNNNNGG	8 cut(s)	74, 106, 197, 682, 802, 970, 1386, 1453
BseMI	GCAATG	1 cut(s)	510
BseMII	CTCAG	6 cut(s)	206, 413, 1578, 1632, 1907, 2199
BseNI	ACTGG	4 cut(s)	130, 633, 1431, 1805
BseRI	GAGGAG	2 cut(s)	90, 762
BseSI	GKGCMC	1 cut(s)	414
BseXI	GCAGC	9 cut(s)	357, 420, 600, 836, 1354, 1382, 1385, 1388, 2074
BseYI	CCCAGC	2 cut(s)	770, 868
Bsh1236I	CGCG	1 cut(s)	102
BshFI	GGCC	5 cut(s)	245, 711, 1119, 1430, 1445
BshNI	GGYRCC	1 cut(s)	125
BsiHKAI	GWGCWC	3 cut(s)	361, 549, 2118
BsiHKCI	CYCGRG	1 cut(s)	548
BsiSI	CCGG	5 cut(s)	68, 226, 521, 1209, 1728
BslFI	GGGAC	4 cut(s)	280, 499, 512, 1080
BslI	CCNNNNNNNGG	8 cut(s)	74, 106, 197, 682, 802, 970, 1386, 1453
BsmAI	GTCTC	5 cut(s)	223, 617, 1223, 1260, 1536
BsmFI	GGGAC	4 cut(s)	280, 499, 512, 1080
BsmI	GAATGC	2 cut(s)	1183, 1912
BsnI	GGCC	5 cut(s)	245, 711, 1119, 1430, 1445
Bso31I	GGTCTC	1 cut(s)	1536
BsoBI	CYCGRG	1 cut(s)	548
Bsp119I	TTCGAA	1 cut(s)	182
Bsp1286I	GDGCHC	4 cut(s)	361, 414, 549, 2118
Bsp143I	GATC	8 cut(s)	601, 636, 1090, 1201, 1309, 1389, 1501, 1969
BspACI	CCGC	6 cut(s)	80, 100, 102, 188, 246, 753
BspANI	GGCC	5 cut(s)	245, 711, 1119, 1430, 1445
BspCNI	CTCAG	6 cut(s)	205, 414, 1579, 1633, 1906, 2198
BspFNI	CGCG	1 cut(s)	102
BspHI	TCATGA	2 cut(s)	1504, 2222
BspLI	GGNNCC	2 cut(s)	127, 351
BspMAI	CTGCAG	4 cut(s)	826, 1372, 1411, 1825
BspOI	GCTAGC	1 cut(s)	588
BspPI	GGATC	3 cut(s)	1098, 1304, 1397
BspT104I	TTCGAA	1 cut(s)	182
BspT107I	GGYRCC	1 cut(s)	125
BspTNI	GGTCTC	1 cut(s)	1536
BsrBI	CCGCTC	1 cut(s)	80
BsrDI	GCAATG	1 cut(s)	510
BsrI	ACTGG	4 cut(s)	130, 633, 1431, 1805
BssECI	CCNNGG	6 cut(s)	100, 142, 715, 1291, 1907, 1917
BssMI	GATC	8 cut(s)	601, 636, 1090, 1201, 1309, 1389, 1501, 1969
BssNI	GRCGYC	1 cut(s)	97
BssT1I	CCWWGG	1 cut(s)	1291
Bst2UI	CCWGG	3 cut(s)	242, 354, 1908
Bst4CI	ACNGT	7 cut(s)	416, 791, 1140, 1318, 1538, 2039, 2047
Bst6I	CTCTTC	5 cut(s)	274, 627, 699, 1527, 1594
BstACI	GRCGYC	1 cut(s)	97
BstAPI	GCANNNNNTGC	2 cut(s)	418, 1853
BstBAI	YACGTR	1 cut(s)	1754
BstBI	TTCGAA	1 cut(s)	182
BstC8I	GCNNGC	5 cut(s)	162, 250, 586, 903, 2067
BstDSI	CCRYGG	3 cut(s)	100, 715, 1917
BstEII	GGTNACC	1 cut(s)	1800
BstENI	CCTNNNNNAGG	3 cut(s)	680, 800, 1451
BstF5I	GGATG	7 cut(s)	864, 1192, 1348, 1742, 1948, 2119, 2195
BstFNI	CGCG	1 cut(s)	102
BstH2I	RGCGCY	1 cut(s)	902
BstHHI	GCGC	2 cut(s)	901, 907
BstKTI	GATC	8 cut(s)	604, 639, 1093, 1204, 1312, 1392, 1504, 1972
BstMAI	GTCTC	5 cut(s)	223, 617, 1223, 1260, 1536
BstMBI	GATC	8 cut(s)	601, 636, 1090, 1201, 1309, 1389, 1501, 1969
BstNI	CCWGG	3 cut(s)	242, 354, 1908
BstNSI	RCATGY	1 cut(s)	493
BstPI	GGTNACC	1 cut(s)	1800
BstSCI	CCNGG	5 cut(s)	240, 352, 1207, 1726, 1906
BstSFI	CTRYAG	7 cut(s)	822, 999, 1155, 1314, 1368, 1407, 1821
BstSLI	GKGCMC	1 cut(s)	414
BstSNI	TACGTA	1 cut(s)	1754
BstUI	CGCG	1 cut(s)	102
BstV1I	GCAGC	9 cut(s)	357, 420, 600, 836, 1354, 1382, 1385, 1388, 2074
BstV2I	GAAGAC	4 cut(s)	70, 312, 318, 1539
BstX2I	RGATCY	1 cut(s)	1090
BstYI	RGATCY	1 cut(s)	1090
BsuRI	GGCC	5 cut(s)	245, 711, 1119, 1430, 1445
BtgI	CCRYGG	3 cut(s)	100, 715, 1917
BtsCI	GGATG	7 cut(s)	864, 1192, 1348, 1742, 1948, 2119, 2195
BtsIMutI	CAGTG	7 cut(s)	626, 1438, 1543, 1776, 2044, 2052, 2199
Cac8I	GCNNGC	5 cut(s)	162, 250, 586, 903, 2067
CaiI	CAGNNNCTG	2 cut(s)	1447, 1775
CciI	TCATGA	2 cut(s)	1504, 2222
CfoI	GCGC	2 cut(s)	901, 907
Cfr13I	GGNCC	5 cut(s)	709, 1117, 1444, 1904, 2001
Cfr42I	CCGCGG	1 cut(s)	103
CseI	GACGC	4 cut(s)	105, 221, 509, 1853
Csp6I	GTAC	3 cut(s)	119, 196, 286
CviAII	CATG	6 cut(s)	490, 1110, 1233, 1505, 2129, 2223
CviQI	GTAC	3 cut(s)	119, 196, 286
DpnI	GATC	8 cut(s)	603, 638, 1092, 1203, 1311, 1391, 1503, 1971
DpnII	GATC	8 cut(s)	601, 636, 1090, 1201, 1309, 1389, 1501, 1969
DrdI	GACNNNNNNGTC	1 cut(s)	218
DseDI	GACNNNNNNGTC	1 cut(s)	218
Eam1104I	CTCTTC	5 cut(s)	274, 627, 699, 1527, 1594
EarI	CTCTTC	5 cut(s)	274, 627, 699, 1527, 1594
EciI	GGCGGA	1 cut(s)	768
Ecl136II	GAGCTC	1 cut(s)	359
Eco105I	TACGTA	1 cut(s)	1754
Eco130I	CCWWGG	1 cut(s)	1291
Eco24I	GRGCYC	1 cut(s)	361
Eco31I	GGTCTC	1 cut(s)	1536
Eco47I	GGWCC	2 cut(s)	1904, 2001
Eco53kI	GAGCTC	1 cut(s)	359
Eco57I	CTGAAG	5 cut(s)	590, 962, 1419, 1551, 2223
Eco88I	CYCGRG	1 cut(s)	548
Eco91I	GGTNACC	1 cut(s)	1800
EcoICRI	GAGCTC	1 cut(s)	359
EcoNI	CCTNNNNNAGG	3 cut(s)	680, 800, 1451
EcoO109I	RGGNCCY	2 cut(s)	709, 1444
EcoO65I	GGTNACC	1 cut(s)	1800
EcoRII	CCWGG	3 cut(s)	240, 352, 1906
EcoT14I	CCWWGG	1 cut(s)	1291
EcoT38I	GRGCYC	1 cut(s)	361
ErhI	CCWWGG	1 cut(s)	1291
FaeI	CATG	6 cut(s)	493, 1113, 1236, 1508, 2132, 2226
FalI	AAGNNNNNCTT	2 cut(s)	2070, 2102
FaqI	GGGAC	4 cut(s)	280, 499, 512, 1080
FatI	CATG	6 cut(s)	489, 1109, 1232, 1504, 2128, 2222
FauI	CCCGC	1 cut(s)	95
FokI	GGATG	7 cut(s)	851, 1199, 1355, 1729, 1955, 2106, 2202
FriOI	GRGCYC	1 cut(s)	361
FspBI	CTAG	7 cut(s)	174, 260, 585, 665, 1121, 1865, 2054
GlaI	GCGC	2 cut(s)	900, 906
GsaI	CCCAGC	2 cut(s)	774, 872
GsuI	CTGGAG	3 cut(s)	224, 259, 375
HaeII	RGCGCY	1 cut(s)	902
HaeIII	GGCC	5 cut(s)	245, 711, 1119, 1430, 1445
HapII	CCGG	5 cut(s)	68, 226, 521, 1209, 1728
HgaI	GACGC	4 cut(s)	105, 221, 509, 1853
HhaI	GCGC	2 cut(s)	901, 907
Hin1I	GRCGYC	1 cut(s)	97
Hin1II	CATG	6 cut(s)	493, 1113, 1236, 1508, 2132, 2226
Hin6I	GCGC	2 cut(s)	899, 905
HinP1I	GCGC	2 cut(s)	899, 905
HincII	GTYRAC	3 cut(s)	487, 1015, 1615
HindII	GTYRAC	3 cut(s)	487, 1015, 1615
HindIII	AAGCTT	1 cut(s)	877
HinfI	GANTC	6 cut(s)	235, 777, 1068, 1556, 1571, 1631
HpaI	GTTAAC	1 cut(s)	1015
HpaII	CCGG	5 cut(s)	68, 226, 521, 1209, 1728
HphI	GGTGA	9 cut(s)	196, 319, 478, 631, 772, 1128, 1307, 1350, 1958
Hpy166II	GTNNAC	5 cut(s)	487, 671, 1015, 1076, 1615
Hpy188I	TCNGA	4 cut(s)	725, 1783, 1872, 1933
Hpy8I	GTNNAC	5 cut(s)	487, 671, 1015, 1076, 1615
Hpy99I	CGWCG	3 cut(s)	99, 152, 335
HpyAV	CCTTC	6 cut(s)	49, 572, 693, 1447, 1853, 2198
HpyCH4III	ACNGT	7 cut(s)	416, 791, 1140, 1318, 1538, 2039, 2047
HpyCH4IV	ACGT	3 cut(s)	333, 646, 1753
HpySE526I	ACGT	3 cut(s)	333, 646, 1753
Hsp92I	GRCGYC	1 cut(s)	97
Hsp92II	CATG	6 cut(s)	493, 1113, 1236, 1508, 2132, 2226
HspAI	GCGC	2 cut(s)	899, 905
KspAI	GTTAAC	1 cut(s)	1015
KspI	CCGCGG	1 cut(s)	103
Kzo9I	GATC	8 cut(s)	601, 636, 1090, 1201, 1309, 1389, 1501, 1969
LmnI	GCTCC	6 cut(s)	77, 356, 391, 755, 2121, 2207
Lsp1109I	GCAGC	9 cut(s)	357, 420, 600, 836, 1354, 1382, 1385, 1388, 2074
LweI	GCATC	4 cut(s)	943, 1645, 1787, 2122
MaeI	CTAG	7 cut(s)	174, 260, 585, 665, 1121, 1865, 2054
MaeII	ACGT	3 cut(s)	333, 646, 1753
MaeIII	GTNAC	5 cut(s)	609, 785, 1771, 1800, 2041
MalI	GATC	8 cut(s)	603, 638, 1092, 1203, 1311, 1391, 1503, 1971
MbiI	CCGCTC	1 cut(s)	80
MboI	GATC	8 cut(s)	601, 636, 1090, 1201, 1309, 1389, 1501, 1969
MflI	RGATCY	1 cut(s)	1090
MhlI	GDGCHC	4 cut(s)	361, 414, 549, 2118
MlyI	GAGTC	1 cut(s)	1062
MmeI	TCCRAC	4 cut(s)	724, 1206, 1320, 1690
MseI	TTAA	5 cut(s)	851, 1014, 1623, 1815, 2105
MspA1I	CMGCKG	3 cut(s)	102, 827, 998
MspI	CCGG	5 cut(s)	68, 226, 521, 1209, 1728
MspR9I	CCNGG	5 cut(s)	242, 354, 1209, 1728, 1908
Mva1269I	GAATGC	2 cut(s)	1183, 1912
MvaI	CCWGG	3 cut(s)	242, 354, 1908
MvnI	CGCG	1 cut(s)	102
NciI	CCSGG	2 cut(s)	1209, 1728
NdeII	GATC	8 cut(s)	601, 636, 1090, 1201, 1309, 1389, 1501, 1969
NheI	GCTAGC	1 cut(s)	584
NlaIII	CATG	6 cut(s)	493, 1113, 1236, 1508, 2132, 2226
NlaIV	GGNNCC	2 cut(s)	127, 351
NmeAIII	GCCGAG	2 cut(s)	102, 123
NmuCI	GTSAC	3 cut(s)	609, 785, 1771
NspI	RCATGY	1 cut(s)	493
NspV	TTCGAA	1 cut(s)	182
PaeR7I	CTCGAG	1 cut(s)	548
PagI	TCATGA	2 cut(s)	1504, 2222
PciI	ACATGT	1 cut(s)	489
PcsI	WCGNNNNNNNCGW	1 cut(s)	306
PctI	GAATGC	2 cut(s)	1183, 1912
PfeI	GAWTC	5 cut(s)	235, 777, 1556, 1571, 1631
PfoI	TCCNGGA	2 cut(s)	352, 1207
PleI	GAGTC	1 cut(s)	1062
PpsI	GAGTC	1 cut(s)	1062
Ppu21I	YACGTR	1 cut(s)	1754
PscI	ACATGT	1 cut(s)	489
Psp124BI	GAGCTC	1 cut(s)	361
Psp6I	CCWGG	3 cut(s)	240, 352, 1906
PspEI	GGTNACC	1 cut(s)	1800
PspFI	CCCAGC	2 cut(s)	770, 868
PspGI	CCWGG	3 cut(s)	240, 352, 1906
PspN4I	GGNNCC	2 cut(s)	127, 351
PspPI	GGNCC	5 cut(s)	709, 1117, 1444, 1904, 2001
PsrI	GAACNNNNNNTAC	2 cut(s)	2140, 2172
PstI	CTGCAG	4 cut(s)	826, 1372, 1411, 1825
PstNI	CAGNNNCTG	2 cut(s)	1447, 1775
PsuI	RGATCY	1 cut(s)	1090
PvuII	CAGCTG	2 cut(s)	827, 998
RsaI	GTAC	3 cut(s)	120, 197, 287
RsaNI	GTAC	3 cut(s)	119, 196, 286
SacI	GAGCTC	1 cut(s)	361
SacII	CCGCGG	1 cut(s)	103
SaqAI	TTAA	5 cut(s)	851, 1014, 1623, 1815, 2105
Sau3AI	GATC	8 cut(s)	601, 636, 1090, 1201, 1309, 1389, 1501, 1969
Sau96I	GGNCC	5 cut(s)	709, 1117, 1444, 1904, 2001
ScaI	AGTACT	1 cut(s)	120
SchI	GAGTC	1 cut(s)	1062
ScrFI	CCNGG	5 cut(s)	242, 354, 1209, 1728, 1908
SduI	GDGCHC	4 cut(s)	361, 414, 549, 2118
SfaNI	GCATC	4 cut(s)	943, 1645, 1787, 2122
SfcI	CTRYAG	7 cut(s)	822, 999, 1155, 1314, 1368, 1407, 1821
Sfr274I	CTCGAG	1 cut(s)	548
Sfr303I	CCGCGG	1 cut(s)	103
SfuI	TTCGAA	1 cut(s)	182
SgrBI	CCGCGG	1 cut(s)	103
SinI	GGWCC	2 cut(s)	1904, 2001
SlaI	CTCGAG	1 cut(s)	548
SmlI	CTYRAG	5 cut(s)	548, 915, 1321, 1494, 2026
SmoI	CTYRAG	5 cut(s)	548, 915, 1321, 1494, 2026
SnaBI	TACGTA	1 cut(s)	1754
SsiI	CCGC	6 cut(s)	80, 100, 102, 188, 246, 753
SspMI	CTAG	7 cut(s)	174, 260, 585, 665, 1121, 1865, 2054
SstI	GAGCTC	1 cut(s)	361
StyD4I	CCNGG	5 cut(s)	240, 352, 1207, 1726, 1906
StyI	CCWWGG	1 cut(s)	1291
TaaI	ACNGT	7 cut(s)	416, 791, 1140, 1318, 1538, 2039, 2047
TaiI	ACGT	3 cut(s)	336, 649, 1756
TaqI	TCGA	6 cut(s)	182, 494, 549, 1161, 1972, 2138
TatI	WGTACW	2 cut(s)	118, 285
TauI	GCSGC	3 cut(s)	102, 190, 248
TfiI	GAWTC	5 cut(s)	235, 777, 1556, 1571, 1631
Tru1I	TTAA	5 cut(s)	851, 1014, 1623, 1815, 2105
Tru9I	TTAA	5 cut(s)	851, 1014, 1623, 1815, 2105
TscAI	CASTG	7 cut(s)	633, 1438, 1543, 1776, 2044, 2052, 2206
TseFI	GTSAC	3 cut(s)	609, 785, 1771
TseI	GCWGC	9 cut(s)	370, 433, 588, 824, 1367, 1370, 1373, 1376, 2062
Tsp45I	GTSAC	3 cut(s)	609, 785, 1771
TspDTI	ATGAA	3 cut(s)	1047, 1526, 1578
TspGWI	ACGGA	4 cut(s)	330, 404, 704, 1906
TspRI	CASTG	7 cut(s)	633, 1438, 1543, 1776, 2044, 2052, 2206
VpaK11BI	GGWCC	2 cut(s)	1904, 2001
XagI	CCTNNNNNAGG	3 cut(s)	680, 800, 1451
XceI	RCATGY	1 cut(s)	493
XhoI	CTCGAG	1 cut(s)	548
XspI	CTAG	7 cut(s)	174, 260, 585, 665, 1121, 1865, 2054
ZrmI	AGTACT	1 cut(s)	120

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.