Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0006681

Physical Location & Seq

Genomic Coordinates Reverse (-)

61727233 .. 61731167

Gene Structure 3935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG425400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGGAGACCTTGACACACTTGGCCATTGGCTTCTACACCCCAAGACTCTCCGCCCCTTTCCCACACTCAAGAAAACCCCAAAAGCTCAGGCCCGCATTATGCTCCGCCAGCAAATGGGCCGACCGCCTCCTCGCCGACTTCCAATTCCTCGGCGACTCCTCCTCCTCAGACCACCATTCCACCACCGCCACTCTCGCTCCTCCTCCTCCCAATCTGCCTCCCCCACTCGCTCCTCCCGAGCGCCACGTGTCCGTCCCCCTCGACTTCTACCAGGTACTCGGCACCCAGTCGCATTTCCTGGGCGACGGGATTAGGCGAGCTTACGAGGCTAGGGCTTCGAAGCCGCCTCAGTACGGCTTCACCCAAGACGCTTTGGTCAGCCGGAGACAGATTCTCCAGGCCGCCTGCGAAACCCTAGCCGACCCTACCTCCAGAAGAGAGTACAATCAGTCCCTCGTTGAAGACGAAGACGGAACAATTCTCACCGACGTTCCTTTTGATAAGGTTCCTGGAGCTCTTTGTGTGCTGCAAGAAGCTGGAAAGACGGAGCTGGTTCTTCAAATTGGGCACAGTTTGCTGAGAGAGAGGCTGCCCAAATCGTTCAAGCAAGATGTGGTTTTGGTGATGGCACTTGCTTATGTTGACATGTCGAGGGATGCAATGGCATTGTCCCCACCGGATTTTATTCAGGGTTGTGAAGTGCTCGAGAGGGCTTTGAAGCTCTTGCAGGAGGAAGGTGCTAGCAGCCTTGCACCTGATCTTCAGTCACAAATTGACGAAACACTGGAAGAGATCACCCCACGTTGCATTTTGGAACTTCTAGGTTTACCCCTTGATGAGGACTACCAATCAAGAAGGGAAGAGGGCCTCCGTGGTGTCCGAAACATATTGTGGTCTGTTGGAGGAGGCGGAGCAGTTGCTCTTGCTGGGGGATTCACCCGTGACAGTTTCCTGAACGAGGTCTTTTTACGAATGACTGCAGCTGAACAGGTGGAACTATATGTATCAACACCAAAAAACATCCCAGCCGAAAGCTTTGAAGTTTATGGAGTGGCGCTTGCGCTTGTTGCTCAAGCCTTTGTTGGTAAAAAACCTAATCACATTCAAGATGCTGATAACCTGTTCTGGGAACTTCAGCAGAATAAGGTGTCAGCTGTAGGACACTCTGTTAACACCTATATAACCAATGAAAATAGTGAGATAGACTTTGCTTTGGAGAGGGGACTCTGTTCACTTCTTCTGGGGGATCTTGATGAGTGTCGCTCATGGTTGGGCCTAGACAATAATAATTCACCGTATAGAAATCCATCTGTAGTCGATTTTGTCTTGGAGAATGCTAAGGATGATGATGACAATGATCTTCCCGGACTTTGTAAGCTGTTGGAGACATGGTTGATGGAGGTGGTATTACCCAGATTTAGAGACACCAAAGATATTGAGTTCAGCCTTGGTGATTATTATGATGATCCTACAGTCTTGAGATACTTAGAAAGGCTGGATGGAACTAATGGCTCACCCTTAGCTGCAGCAGCAGCCATAGTAAGGATCGGTGCTGAAGCTACTGCAGTTCTTGATAATGTCAAGGCCAGTGCAATTCAGGCCCTGTGGAAGGTGTTTCCTCTGGGTCAAAGAGATAAGAATATGACACCTCAAGAAGATCATGAGATGAATTATTCTCTTCTTCCTGAAGACAGTGGAGACCCTTTGGAAGAATCCTATGAAGATGATTCTATTCGTGTTGCTGAGGTTTCTGGAAGAGATGGTTCTGTTGACACACTTAAAGAAGAATCAATTACTGAGCAAATCAAAGATGCAAGTGTGAAAATTATGTGTGCTGGTGTGGTAATTGGACTACTGACTTTTGTTGGATTGAAGTATTTACCCGGCAGGAATAGCTCATCCAATCTACGTAAAGAACTTAGTTCAGTGACTGCATCTGATGTCACTAGTTCAGGGTTACCAGTAGATGTTAAGTCTGCAGAGGATTTACCCAAAATGGACGCACAAATTGCCGAAGGTCTAGTTCGGAAATGGCAGAACATGAAATCTCAGGCTTTTGGACCTGGGCATTCCGTGGATAAATTGTCAGAGGTATTGGATGGTGAGATGTTGAAGATATGGACAGATCGTGCAACTGAAATTGCACAGCTAAATTGGTCCTATGATTACTCCCTTTTGAACTTGAGCATTGACAGTGTAACAGTGTCGCTAGATGGGCAGCGTGCTGTGGTGGAAGCAACTCTTGAAGAATTAGCCCAATTAACTGATGTGCTCCATCCAGAGCATGATGCCTCGAATAGCAGAACATACACTACAAGATATGAGATGTCTTGTTCAAGCTCAGGATGGAAAATCACTGAAGGAGCTGTCCTCCAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009706 GO:0009941 GO:0009987 GO:0010020 GO:0016020 GO:0016021 GO:0016043 GO:0019866 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031352 GO:0031353 GO:0031356 GO:0031357 GO:0031967 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4101

Protein Analysis

793

Amino Acids

87.35

Weight (kDa)

4.64

Isoelectric Point (pI)

46.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arm_PDR	PF25515	163 - 304	1.2e-51	Plastid division regulator ARM repeat
ARC6	PF23468	324 - 518	1.3e-89	Plastid division regulator alpha solenoid domain
ARC6-like_IMS	PF13355	671 - 786	3.9e-33	ARC6-like, IMS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42480 AT5G42480
fragaria_vesca	FvH4_2g39070 FvH4_2g39070 FvH4_2g39070 FvH4_2g39070
malus_domestica	MD15G1016900.v1.1
prunus_persica	Prupe.1G370400_v2.0.a1
pyrus_communis	pycom15g01470 pycom15g01490 pycom15g01500
rosa_chinensis	RchiOBHm_Chr6g0302171
rosa_laevigata	RLG00000011189
rosa_multiflora	Rmu_sc0015826.1_g000001 Rmu_sc0025484.1_g000001 Rmu_sc0031609.1_g000001 Rmu_sc0041248.1_g000001 Rmu_ssc0000160.1_g000018
rosa_roxburghii	Rroxscaffold_7G00166020
rosa_rugosa	Rorug06G0312800 Rorug06G0312900
rosa_samantha	Rh6AG425400 Rh6BG477100 Rh6CG438200 Rh6DG425200
rosa_wichuraiana	Rw6G036840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	374
AccB1I	GGYRCC	1 cut(s)	281
AccB7I	CCANNNNNTGG	1 cut(s)	114
AciI	CCGC	8 cut(s)	51, 93, 105, 124, 186, 344, 402, 909
AclWI	GGATC	3 cut(s)	1254, 1460, 1553
AcoI	YGGCCR	1 cut(s)	21
AcuI	CTGAAG	5 cut(s)	746, 1118, 1575, 1707, 2379
AcvI	CACGTG	1 cut(s)	247
AfaI	GTAC	3 cut(s)	276, 353, 443
AfiI	CCNNNNNNNGG	7 cut(s)	114, 353, 838, 958, 1126, 1542, 1609
AflIII	ACRYGT	2 cut(s)	246, 645
AhlI	ACTAGT	1 cut(s)	1946
AjnI	CCWGG	5 cut(s)	270, 297, 396, 508, 2062
Alw21I	GWGCWC	3 cut(s)	517, 705, 2274
Alw26I	GTCTC	4 cut(s)	379, 1379, 1416, 1692
AlwI	GGATC	3 cut(s)	1254, 1460, 1553
AlwNI	CAGNNNCTG	2 cut(s)	1603, 1931
Ama87I	CYCGRG	2 cut(s)	236, 704
AoxI	GGCC	8 cut(s)	21, 89, 117, 399, 865, 1273, 1584, 1599
ApeKI	GCWGC	9 cut(s)	526, 589, 744, 980, 1523, 1526, 1529, 1532, 2218
ArsI	GACNNNNNNTTYG	2 cut(s)	479, 511
AspLEI	GCGC	3 cut(s)	243, 1057, 1063
AspS9I	GGNCC	7 cut(s)	90, 117, 865, 1273, 1600, 2060, 2157
AsuC2I	CCSGG	2 cut(s)	1365, 1884
AsuHPI	GGTGA	9 cut(s)	352, 475, 634, 787, 928, 1284, 1463, 1506, 2114
AsuII	TTCGAA	1 cut(s)	338
AsuNHI	GCTAGC	1 cut(s)	740
AvaI	CYCGRG	2 cut(s)	236, 704
AvaII	GGWCC	2 cut(s)	2060, 2157
BaeGI	GKGCMC	1 cut(s)	570
BalI	TGGCCA	1 cut(s)	23
BanI	GGYRCC	1 cut(s)	281
BanII	GRGCYC	1 cut(s)	517
BbrPI	CACGTG	1 cut(s)	247
BbsI	GAAGAC	3 cut(s)	468, 474, 1695
Bbv12I	GWGCWC	3 cut(s)	517, 705, 2274
BbvCI	CCTCAGC	1 cut(s)	1743
BbvI	GCAGC	9 cut(s)	513, 576, 756, 992, 1510, 1538, 1541, 1544, 2230
BccI	CCATC	9 cut(s)	619, 1315, 1390, 1493, 1754, 2093, 2207, 2283, 2340
BceAI	ACGGC	1 cut(s)	370
BciT130I	CCWGG	5 cut(s)	272, 299, 398, 510, 2064
BcnI	CCSGG	2 cut(s)	1365, 1884
BcoDI	GTCTC	4 cut(s)	379, 1379, 1416, 1692
BcuI	ACTAGT	1 cut(s)	1946
BfaI	CTAG	8 cut(s)	330, 416, 741, 821, 1277, 1947, 2021, 2210
BfmI	CTRYAG	7 cut(s)	978, 1155, 1311, 1470, 1524, 1563, 1977
BfoI	RGCGCY	2 cut(s)	244, 1058
Bme1390I	CCNGG	7 cut(s)	272, 299, 398, 510, 1365, 1884, 2064
Bme18I	GGWCC	2 cut(s)	2060, 2157
BmeT110I	CYCGRG	2 cut(s)	236, 704
BmgT120I	GGNCC	7 cut(s)	90, 117, 865, 1273, 1600, 2060, 2157
BmiI	GGNNCC	2 cut(s)	283, 507
BmrFI	CCNGG	7 cut(s)	272, 299, 398, 510, 1365, 1884, 2064
BmrI	ACTGGG	1 cut(s)	280
BmsI	GCATC	5 cut(s)	646, 1099, 1801, 1943, 2278
BmtI	GCTAGC	1 cut(s)	744
BmuI	ACTGGG	1 cut(s)	280
BpiI	GAAGAC	3 cut(s)	468, 474, 1695
BplI	GAGNNNNNCTC	3 cut(s)	1247, 1279, 2355
BpmI	CTGGAG	3 cut(s)	380, 415, 531
Bpu10I	CCTNAGC	5 cut(s)	86, 1338, 1519, 1743, 2341
Bpu14I	TTCGAA	1 cut(s)	338
BpuEI	CTTGAG	5 cut(s)	52, 1056, 1498, 1635, 2203
BpuMI	CCSGG	2 cut(s)	1365, 1884
BsaAI	YACGTR	2 cut(s)	247, 1910
BsaI	GGTCTC	1 cut(s)	1692
BsaJI	CCNNGG	6 cut(s)	148, 298, 871, 1447, 2063, 2073
BsaWI	WCCGGW	1 cut(s)	676
Bsc4I	CCNNNNNNNGG	7 cut(s)	114, 353, 838, 958, 1126, 1542, 1609
Bse1I	ACTGG	4 cut(s)	286, 789, 1587, 1961
Bse3DI	GCAATG	1 cut(s)	666
BseBI	CCWGG	5 cut(s)	272, 299, 398, 510, 2064
BseDI	CCNNGG	6 cut(s)	148, 298, 871, 1447, 2063, 2073
BseGI	GGATG	8 cut(s)	661, 1020, 1348, 1504, 1898, 2104, 2275, 2351
BseLI	CCNNNNNNNGG	7 cut(s)	114, 353, 838, 958, 1126, 1542, 1609
BseMI	GCAATG	1 cut(s)	666
BseMII	CTCAG	8 cut(s)	100, 180, 362, 569, 1734, 1788, 2063, 2355
BseNI	ACTGG	4 cut(s)	286, 789, 1587, 1961
BseRI	GAGGAG	9 cut(s)	119, 148, 151, 154, 189, 192, 195, 222, 918
BseSI	GKGCMC	1 cut(s)	570
BseXI	GCAGC	9 cut(s)	513, 576, 756, 992, 1510, 1538, 1541, 1544, 2230
BseYI	CCCAGC	2 cut(s)	926, 1024
Bsh1285I	CGRYCG	1 cut(s)	124
BshFI	GGCC	8 cut(s)	23, 91, 119, 401, 867, 1275, 1586, 1601
BshNI	GGYRCC	1 cut(s)	281
BsiEI	CGRYCG	1 cut(s)	124
BsiHKAI	GWGCWC	3 cut(s)	517, 705, 2274
BsiHKCI	CYCGRG	2 cut(s)	236, 704
BsiSI	CCGG	4 cut(s)	382, 677, 1365, 1884
BslFI	GGGAC	4 cut(s)	239, 436, 655, 1236
BslI	CCNNNNNNNGG	7 cut(s)	114, 353, 838, 958, 1126, 1542, 1609
BsmAI	GTCTC	4 cut(s)	379, 1379, 1416, 1692
BsmFI	GGGAC	4 cut(s)	239, 436, 655, 1236
BsmI	GAATGC	2 cut(s)	1339, 2068
BsnI	GGCC	8 cut(s)	23, 91, 119, 401, 867, 1275, 1586, 1601
Bso31I	GGTCTC	1 cut(s)	1692
BsoBI	CYCGRG	2 cut(s)	236, 704
Bsp119I	TTCGAA	1 cut(s)	338
Bsp1286I	GDGCHC	4 cut(s)	517, 570, 705, 2274
Bsp143I	GATC	8 cut(s)	757, 792, 1246, 1357, 1465, 1545, 1657, 2125
BspACI	CCGC	8 cut(s)	51, 93, 105, 124, 186, 344, 402, 909
BspANI	GGCC	8 cut(s)	23, 91, 119, 401, 867, 1275, 1586, 1601
BspCNI	CTCAG	8 cut(s)	99, 179, 361, 570, 1735, 1789, 2062, 2354
BspHI	TCATGA	2 cut(s)	1660, 2378
BspLI	GGNNCC	2 cut(s)	283, 507
BspMAI	CTGCAG	4 cut(s)	982, 1528, 1567, 1981
BspOI	GCTAGC	1 cut(s)	744
BspPI	GGATC	3 cut(s)	1254, 1460, 1553
BspT104I	TTCGAA	1 cut(s)	338
BspT107I	GGYRCC	1 cut(s)	281
BspTNI	GGTCTC	1 cut(s)	1692
BsrDI	GCAATG	1 cut(s)	666
BsrI	ACTGG	4 cut(s)	286, 789, 1587, 1961
BssECI	CCNNGG	6 cut(s)	148, 298, 871, 1447, 2063, 2073
BssMI	GATC	8 cut(s)	757, 792, 1246, 1357, 1465, 1545, 1657, 2125
BssT1I	CCWWGG	1 cut(s)	1447
Bst2UI	CCWGG	5 cut(s)	272, 299, 398, 510, 2064
Bst4CI	ACNGT	7 cut(s)	572, 947, 1296, 1474, 1694, 2195, 2203
Bst6I	CTCTTC	5 cut(s)	430, 783, 855, 1683, 1750
BstAPI	GCANNNNNTGC	2 cut(s)	574, 2009
BstBAI	YACGTR	2 cut(s)	247, 1910
BstBI	TTCGAA	1 cut(s)	338
BstC8I	GCNNGC	7 cut(s)	93, 109, 318, 406, 742, 1059, 2223
BstDSI	CCRYGG	2 cut(s)	871, 2073
BstEII	GGTNACC	1 cut(s)	1956
BstENI	CCTNNNNNAGG	3 cut(s)	836, 956, 1607
BstF5I	GGATG	8 cut(s)	661, 1020, 1348, 1504, 1898, 2104, 2275, 2351
BstH2I	RGCGCY	2 cut(s)	244, 1058
BstHHI	GCGC	3 cut(s)	243, 1057, 1063
BstKTI	GATC	8 cut(s)	760, 795, 1249, 1360, 1468, 1548, 1660, 2128
BstMAI	GTCTC	4 cut(s)	379, 1379, 1416, 1692
BstMBI	GATC	8 cut(s)	757, 792, 1246, 1357, 1465, 1545, 1657, 2125
BstMCI	CGRYCG	1 cut(s)	124
BstNI	CCWGG	5 cut(s)	272, 299, 398, 510, 2064
BstNSI	RCATGY	1 cut(s)	649
BstPI	GGTNACC	1 cut(s)	1956
BstSCI	CCNGG	7 cut(s)	270, 297, 396, 508, 1363, 1882, 2062
BstSFI	CTRYAG	7 cut(s)	978, 1155, 1311, 1470, 1524, 1563, 1977
BstSLI	GKGCMC	1 cut(s)	570
BstSNI	TACGTA	1 cut(s)	1910
BstV1I	GCAGC	9 cut(s)	513, 576, 756, 992, 1510, 1538, 1541, 1544, 2230
BstV2I	GAAGAC	3 cut(s)	468, 474, 1695
BstX2I	RGATCY	1 cut(s)	1246
BstYI	RGATCY	1 cut(s)	1246
BsuRI	GGCC	8 cut(s)	23, 91, 119, 401, 867, 1275, 1586, 1601
BtgI	CCRYGG	2 cut(s)	871, 2073
BtsCI	GGATG	8 cut(s)	661, 1020, 1348, 1504, 1898, 2104, 2275, 2351
BtsIMutI	CAGTG	7 cut(s)	782, 1594, 1699, 1932, 2200, 2208, 2355
Cac8I	GCNNGC	7 cut(s)	93, 109, 318, 406, 742, 1059, 2223
CaiI	CAGNNNCTG	2 cut(s)	1603, 1931
CciI	TCATGA	2 cut(s)	1660, 2378
CfoI	GCGC	3 cut(s)	243, 1057, 1063
Cfr13I	GGNCC	7 cut(s)	90, 117, 865, 1273, 1600, 2060, 2157
CseI	GACGC	2 cut(s)	377, 2009
CsiI	ACCWGGT	1 cut(s)	270
Csp6I	GTAC	3 cut(s)	275, 352, 442
CviAII	CATG	7 cut(s)	646, 1266, 1389, 1661, 2041, 2285, 2379
CviQI	GTAC	3 cut(s)	275, 352, 442
DpnI	GATC	8 cut(s)	759, 794, 1248, 1359, 1467, 1547, 1659, 2127
DpnII	GATC	8 cut(s)	757, 792, 1246, 1357, 1465, 1545, 1657, 2125
DrdI	GACNNNNNNGTC	1 cut(s)	374
DseDI	GACNNNNNNGTC	1 cut(s)	374
EaeI	YGGCCR	1 cut(s)	21
Eam1104I	CTCTTC	5 cut(s)	430, 783, 855, 1683, 1750
EarI	CTCTTC	5 cut(s)	430, 783, 855, 1683, 1750
EciI	GGCGGA	3 cut(s)	40, 94, 924
Ecl136II	GAGCTC	1 cut(s)	515
Eco105I	TACGTA	1 cut(s)	1910
Eco130I	CCWWGG	1 cut(s)	1447
Eco24I	GRGCYC	1 cut(s)	517
Eco31I	GGTCTC	1 cut(s)	1692
Eco47I	GGWCC	2 cut(s)	2060, 2157
Eco53kI	GAGCTC	1 cut(s)	515
Eco57I	CTGAAG	5 cut(s)	746, 1118, 1575, 1707, 2379
Eco72I	CACGTG	1 cut(s)	247
Eco88I	CYCGRG	2 cut(s)	236, 704
Eco91I	GGTNACC	1 cut(s)	1956
EcoICRI	GAGCTC	1 cut(s)	515
EcoNI	CCTNNNNNAGG	3 cut(s)	836, 956, 1607
EcoO109I	RGGNCCY	2 cut(s)	865, 1600
EcoO65I	GGTNACC	1 cut(s)	1956
EcoRII	CCWGG	5 cut(s)	270, 297, 396, 508, 2062
EcoT14I	CCWWGG	1 cut(s)	1447
EcoT38I	GRGCYC	1 cut(s)	517
ErhI	CCWWGG	1 cut(s)	1447
FaeI	CATG	7 cut(s)	649, 1269, 1392, 1664, 2044, 2288, 2382
FalI	AAGNNNNNCTT	2 cut(s)	2226, 2258
FaqI	GGGAC	4 cut(s)	239, 436, 655, 1236
FatI	CATG	7 cut(s)	645, 1265, 1388, 1660, 2040, 2284, 2378
FauI	CCCGC	1 cut(s)	100
FokI	GGATG	8 cut(s)	668, 1007, 1355, 1511, 1885, 2111, 2262, 2358
FriOI	GRGCYC	1 cut(s)	517
FspBI	CTAG	8 cut(s)	330, 416, 741, 821, 1277, 1947, 2021, 2210
GlaI	GCGC	3 cut(s)	242, 1056, 1062
GsaI	CCCAGC	2 cut(s)	930, 1028
GsuI	CTGGAG	3 cut(s)	380, 415, 531
HaeII	RGCGCY	2 cut(s)	244, 1058
HaeIII	GGCC	8 cut(s)	23, 91, 119, 401, 867, 1275, 1586, 1601
HapII	CCGG	4 cut(s)	382, 677, 1365, 1884
HgaI	GACGC	2 cut(s)	377, 2009
HhaI	GCGC	3 cut(s)	243, 1057, 1063
Hin1II	CATG	7 cut(s)	649, 1269, 1392, 1664, 2044, 2288, 2382
Hin6I	GCGC	3 cut(s)	241, 1055, 1061
HinP1I	GCGC	3 cut(s)	241, 1055, 1061
HincII	GTYRAC	3 cut(s)	643, 1171, 1771
HindII	GTYRAC	3 cut(s)	643, 1171, 1771
HindIII	AAGCTT	1 cut(s)	1033
HinfI	GANTC	8 cut(s)	45, 155, 391, 933, 1224, 1712, 1727, 1787
HpaI	GTTAAC	1 cut(s)	1171
HpaII	CCGG	4 cut(s)	382, 677, 1365, 1884
HphI	GGTGA	9 cut(s)	352, 475, 634, 787, 928, 1284, 1463, 1506, 2114
Hpy166II	GTNNAC	5 cut(s)	643, 827, 1171, 1232, 1771
Hpy188I	TCNGA	5 cut(s)	169, 881, 1939, 2028, 2089
Hpy8I	GTNNAC	5 cut(s)	643, 827, 1171, 1232, 1771
Hpy99I	CGWCG	2 cut(s)	308, 491
HpyAV	CCTTC	5 cut(s)	728, 849, 1603, 2009, 2354
HpyCH4III	ACNGT	7 cut(s)	572, 947, 1296, 1474, 1694, 2195, 2203
HpyCH4IV	ACGT	4 cut(s)	246, 489, 802, 1909
HpySE526I	ACGT	4 cut(s)	246, 489, 802, 1909
Hsp92II	CATG	7 cut(s)	649, 1269, 1392, 1664, 2044, 2288, 2382
HspAI	GCGC	3 cut(s)	241, 1055, 1061
KspAI	GTTAAC	1 cut(s)	1171
Kzo9I	GATC	8 cut(s)	757, 792, 1246, 1357, 1465, 1545, 1657, 2125
LmnI	GCTCC	8 cut(s)	107, 202, 235, 512, 547, 911, 2277, 2363
Lsp1109I	GCAGC	9 cut(s)	513, 576, 756, 992, 1510, 1538, 1541, 1544, 2230
LweI	GCATC	5 cut(s)	646, 1099, 1801, 1943, 2278
MabI	ACCWGGT	1 cut(s)	270
MaeI	CTAG	8 cut(s)	330, 416, 741, 821, 1277, 1947, 2021, 2210
MaeII	ACGT	4 cut(s)	246, 489, 802, 1909
MaeIII	GTNAC	6 cut(s)	765, 941, 1927, 1942, 1956, 2197
MalI	GATC	8 cut(s)	759, 794, 1248, 1359, 1467, 1547, 1659, 2127
MboI	GATC	8 cut(s)	757, 792, 1246, 1357, 1465, 1545, 1657, 2125
MflI	RGATCY	1 cut(s)	1246
MhlI	GDGCHC	4 cut(s)	517, 570, 705, 2274
MlsI	TGGCCA	1 cut(s)	23
MluNI	TGGCCA	1 cut(s)	23
MlyI	GAGTC	3 cut(s)	39, 149, 1218
MmeI	TCCRAC	3 cut(s)	880, 1362, 1846
Mox20I	TGGCCA	1 cut(s)	23
MscI	TGGCCA	1 cut(s)	23
MseI	TTAA	4 cut(s)	1170, 1779, 1971, 2261
Msp20I	TGGCCA	1 cut(s)	23
MspA1I	CMGCKG	2 cut(s)	983, 1154
MspI	CCGG	4 cut(s)	382, 677, 1365, 1884
MspR9I	CCNGG	7 cut(s)	272, 299, 398, 510, 1365, 1884, 2064
Mva1269I	GAATGC	2 cut(s)	1339, 2068
MvaI	CCWGG	5 cut(s)	272, 299, 398, 510, 2064
NciI	CCSGG	2 cut(s)	1365, 1884
NdeII	GATC	8 cut(s)	757, 792, 1246, 1357, 1465, 1545, 1657, 2125
NheI	GCTAGC	1 cut(s)	740
NlaIII	CATG	7 cut(s)	649, 1269, 1392, 1664, 2044, 2288, 2382
NlaIV	GGNNCC	2 cut(s)	283, 507
NmeAIII	GCCGAG	2 cut(s)	129, 258
NmuCI	GTSAC	4 cut(s)	765, 941, 1927, 1942
NspI	RCATGY	1 cut(s)	649
NspV	TTCGAA	1 cut(s)	338
PaeR7I	CTCGAG	1 cut(s)	704
PagI	TCATGA	2 cut(s)	1660, 2378
PciI	ACATGT	1 cut(s)	645
PcsI	WCGNNNNNNNCGW	2 cut(s)	234, 462
PctI	GAATGC	2 cut(s)	1339, 2068
PfeI	GAWTC	5 cut(s)	391, 933, 1712, 1727, 1787
PflMI	CCANNNNNTGG	1 cut(s)	114
PfoI	TCCNGGA	2 cut(s)	508, 1363
PleI	GAGTC	3 cut(s)	39, 149, 1218
PmaCI	CACGTG	1 cut(s)	247
PmlI	CACGTG	1 cut(s)	247
PpsI	GAGTC	3 cut(s)	39, 149, 1218
Ppu21I	YACGTR	2 cut(s)	247, 1910
PscI	ACATGT	1 cut(s)	645
Psp124BI	GAGCTC	1 cut(s)	517
Psp6I	CCWGG	5 cut(s)	270, 297, 396, 508, 2062
PspCI	CACGTG	1 cut(s)	247
PspEI	GGTNACC	1 cut(s)	1956
PspFI	CCCAGC	2 cut(s)	926, 1024
PspGI	CCWGG	5 cut(s)	270, 297, 396, 508, 2062
PspN4I	GGNNCC	2 cut(s)	283, 507
PspPI	GGNCC	7 cut(s)	90, 117, 865, 1273, 1600, 2060, 2157
PsrI	GAACNNNNNNTAC	2 cut(s)	2296, 2328
PstI	CTGCAG	4 cut(s)	982, 1528, 1567, 1981
PstNI	CAGNNNCTG	2 cut(s)	1603, 1931
PsuI	RGATCY	1 cut(s)	1246
PvuII	CAGCTG	2 cut(s)	983, 1154
RsaI	GTAC	3 cut(s)	276, 353, 443
RsaNI	GTAC	3 cut(s)	275, 352, 442
SacI	GAGCTC	1 cut(s)	517
SaqAI	TTAA	4 cut(s)	1170, 1779, 1971, 2261
Sau3AI	GATC	8 cut(s)	757, 792, 1246, 1357, 1465, 1545, 1657, 2125
Sau96I	GGNCC	7 cut(s)	90, 117, 865, 1273, 1600, 2060, 2157
SchI	GAGTC	3 cut(s)	39, 149, 1218
ScrFI	CCNGG	7 cut(s)	272, 299, 398, 510, 1365, 1884, 2064
SduI	GDGCHC	4 cut(s)	517, 570, 705, 2274
SexAI	ACCWGGT	1 cut(s)	270
SfaNI	GCATC	5 cut(s)	646, 1099, 1801, 1943, 2278
SfcI	CTRYAG	7 cut(s)	978, 1155, 1311, 1470, 1524, 1563, 1977
Sfr274I	CTCGAG	1 cut(s)	704
SfuI	TTCGAA	1 cut(s)	338
SinI	GGWCC	2 cut(s)	2060, 2157
SlaI	CTCGAG	1 cut(s)	704
SmlI	CTYRAG	6 cut(s)	67, 704, 1071, 1477, 1650, 2182
SmoI	CTYRAG	6 cut(s)	67, 704, 1071, 1477, 1650, 2182
SnaBI	TACGTA	1 cut(s)	1910
SpeI	ACTAGT	1 cut(s)	1946
SsiI	CCGC	8 cut(s)	51, 93, 105, 124, 186, 344, 402, 909
SspMI	CTAG	8 cut(s)	330, 416, 741, 821, 1277, 1947, 2021, 2210
SstI	GAGCTC	1 cut(s)	517
StyD4I	CCNGG	7 cut(s)	270, 297, 396, 508, 1363, 1882, 2062
StyI	CCWWGG	1 cut(s)	1447
TaaI	ACNGT	7 cut(s)	572, 947, 1296, 1474, 1694, 2195, 2203
TaiI	ACGT	4 cut(s)	249, 492, 805, 1912
TaqI	TCGA	6 cut(s)	261, 338, 650, 705, 1317, 2294
TatI	WGTACW	1 cut(s)	441
TauI	GCSGC	2 cut(s)	346, 404
TfiI	GAWTC	5 cut(s)	391, 933, 1712, 1727, 1787
Tru1I	TTAA	4 cut(s)	1170, 1779, 1971, 2261
Tru9I	TTAA	4 cut(s)	1170, 1779, 1971, 2261
TscAI	CASTG	7 cut(s)	789, 1594, 1699, 1932, 2200, 2208, 2362
TseFI	GTSAC	4 cut(s)	765, 941, 1927, 1942
TseI	GCWGC	9 cut(s)	526, 589, 744, 980, 1523, 1526, 1529, 1532, 2218
Tsp45I	GTSAC	4 cut(s)	765, 941, 1927, 1942
TspDTI	ATGAA	4 cut(s)	1203, 1682, 1734, 2057
TspGWI	ACGGA	5 cut(s)	241, 486, 560, 860, 2062
TspRI	CASTG	7 cut(s)	789, 1594, 1699, 1932, 2200, 2208, 2362
Van91I	CCANNNNNTGG	1 cut(s)	114
VpaK11BI	GGWCC	2 cut(s)	2060, 2157
XagI	CCTNNNNNAGG	3 cut(s)	836, 956, 1607
XceI	RCATGY	1 cut(s)	649
XhoI	CTCGAG	1 cut(s)	704
XspI	CTAG	8 cut(s)	330, 416, 741, 821, 1277, 1947, 2021, 2210

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.