Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0006681

Physical Location & Seq

Genomic Coordinates Reverse (-)

60605479 .. 60611167

Gene Structure 5689 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG425200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGCACTTGCTTATGTCGACATGTCGAGGGACGCAATGGCATTGTCCCCACCGGATTTTATTCAGGGTTGTGAAGTGCTCGAGAGGGCTCTGAAGCTCTTGCAGGAGGAAGGTGCTAGCAGCCTTGCACCTGATCTTCAAGCACAAATTGACGAGACACTGGAGGAGATCACCCCACGTTGCATTTTGGAACTTCTAGGTTTACCCCTTGATGAGGAGTACCAATCAAGAAGGGAAGAGGGCCTCCGTGGTGTCCGCAACATATTGTGGTCTGTTGGAGGAGGCGGAGCAGTTGCTCTTGCTGGGGGATTCACCCGCGACAGTTTCCTGAACGAGGTCTTTTTACGAATGACTGCAGCTGAACAGGTGGAACTATACGTATCAACACCAAAAAACATCCCAGCCGAAAGCTTTGAAGTTTATGGAGTGGCGCTTGCGCTTGTTGCTCAAGCCTTTGTTGGTAAAAAACCTAATCACATTCAAGATGCCGATAACCTGTTCTGGGAACTTCAGCAGAATAAGGTATCAGCTGTAGGACACTCTGTTAACACCTATATAACCAATGAAAATAGTGAGATAGACTTTGCTTTGGAGAGGGGACTCTGTTCACTTCTTCTGGGGCATCTTGATGAGTGTCGCTCATGGTTGGGCCTAGACAATAATAATTCACCGTATAGAAATCCATCTGTAGTCGATTTTGTCTTGGAGAATGCTAAGGATGATGATGACAATGATCTTCCCGGACTTTGTAAGCTGTTGGAGACATGGTTGATGGAGGTGGTATTCCCCAGATTTAGAGACACCAAAGATATTGAGTTCAGCCTTGGTGATTATTATGATGATCCTACAGTCTTGAGATACTTAGAAAGGCTGGATGGAACTAATGGCTCACCCTTAGCTGCAGCAGCAGCCATAGTAAGGATCGGTGCTGAAGCTACTGCAGTTCTTGATAATGTCAAGGCCAGTGCAATTCAGGCCCTGTGGAAGGTGTTTCCTCTGGGTCAAAGAGATAAGAATATGACACCTCAAGAAGATCATGAGGTGAATTATTCTCTTCTTCCTGAAGACAGTGGAGACCCTTTGGAAGAATCCTATGAAGATGATTCTATTCGTGTTGCTGAGGTTTCTGGAAGAGATGGTTCTGTTGATACACTTAAAGAAGAATCAATTACTGAGCAAATCAAAGATGCAAGTGTGAAGATTATGTGTGCTGGTGTGGTAATTGGACTACTGACTTTTGTTGGATTGAAGTATTTACCCGGCAGGAATAGCTCATCCAATCTACGTAAAGAACTTAGTTCAGTGACTGCATCTGATGTCACTAGTTCAGGGTTACCAGTAGATGTTAAGTCTGCAGAGGAATTACCCAAAATGGACGCACAAATTGCCGAAGGTCTAGTTCGGAAATGGCAGAACATAAAATCTCAGGCTTTTGGACCTGGGCATTCCGTGGATAAATTGTCAGAGGTATTGGATGGTGAGATGTTGAAGATATGGACAGATCGTGCAACTGAAATTGCACAGTTAAATTGGTCCTATGATTACACCCTTTTGAACTTGAGCATTGACAGTGTAACAGTGTCGCTAGATGGGCAGCGTGCTGTGGTGGAAGCAACTCTTGAAGAATTAGCCCAATTAACTGATGTGCTCCATCCAGAGCACGATGCCTCGAATAGCAGAACATACACTACAAGATATGAGATGTCTTGTTCAAGCTCAGGATGGAAAATCACTGAAGGAGCTGTCCTCCAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009706 GO:0009941 GO:0009987 GO:0010020 GO:0016020 GO:0016021 GO:0016043 GO:0019866 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031352 GO:0031353 GO:0031356 GO:0031357 GO:0031967 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4101

Protein Analysis

585

Amino Acids

64.4

Weight (kDa)

4.43

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arm_PDR	PF25515	1 - 96	2e-30	Plastid division regulator ARM repeat
ARC6	PF23468	116 - 310	1.1e-89	Plastid division regulator alpha solenoid domain
ARC6-like_IMS	PF13355	463 - 578	8.5e-34	ARC6-like, IMS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006681)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42480 AT5G42480
fragaria_vesca	FvH4_2g39070 FvH4_2g39070 FvH4_2g39070 FvH4_2g39070
malus_domestica	MD15G1016900.v1.1
prunus_persica	Prupe.1G370400_v2.0.a1
pyrus_communis	pycom15g01470 pycom15g01490 pycom15g01500
rosa_chinensis	RchiOBHm_Chr6g0302171
rosa_laevigata	RLG00000011189
rosa_multiflora	Rmu_sc0015826.1_g000001 Rmu_sc0025484.1_g000001 Rmu_sc0031609.1_g000001 Rmu_sc0041248.1_g000001 Rmu_ssc0000160.1_g000018
rosa_roxburghii	Rroxscaffold_7G00166020
rosa_rugosa	Rorug06G0312800 Rorug06G0312900
rosa_samantha	Rh6AG425400 Rh6BG477100 Rh6CG438200 Rh6DG425200
rosa_wichuraiana	Rw6G036840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	18
AccII	CGCG	1 cut(s)	318
AciI	CCGC	3 cut(s)	256, 285, 316
AclWI	GGATC	2 cut(s)	836, 929
AcuI	CTGAAG	5 cut(s)	113, 494, 951, 1083, 1755
AfaI	GTAC	1 cut(s)	221
AfiI	CCNNNNNNNGG	5 cut(s)	214, 334, 502, 918, 985
AflIII	ACRYGT	1 cut(s)	21
AgsI	TTSAA	8 cut(s)	140, 416, 482, 1249, 1489, 1555, 1622, 1713
AhlI	ACTAGT	1 cut(s)	1322
AjnI	CCWGG	1 cut(s)	1438
Alw21I	GWGCWC	3 cut(s)	81, 1650, 1662
Alw26I	GTCTC	4 cut(s)	149, 755, 792, 1068
AlwI	GGATC	2 cut(s)	836, 929
AlwNI	CAGNNNCTG	2 cut(s)	979, 1307
Ama87I	CYCGRG	1 cut(s)	80
AoxI	GGCC	4 cut(s)	241, 649, 960, 975
ApeKI	GCWGC	7 cut(s)	120, 356, 899, 902, 905, 908, 1594
AspLEI	GCGC	2 cut(s)	433, 439
AspS9I	GGNCC	5 cut(s)	241, 649, 976, 1436, 1533
AsuC2I	CCSGG	2 cut(s)	741, 1260
AsuHPI	GGTGA	7 cut(s)	163, 304, 660, 839, 882, 1054, 1490
AsuNHI	GCTAGC	1 cut(s)	116
AvaI	CYCGRG	1 cut(s)	80
AvaII	GGWCC	2 cut(s)	1436, 1533
BanII	GRGCYC	1 cut(s)	91
BbsI	GAAGAC	1 cut(s)	1071
Bbv12I	GWGCWC	3 cut(s)	81, 1650, 1662
BbvCI	CCTCAGC	1 cut(s)	1119
BbvI	GCAGC	7 cut(s)	132, 368, 886, 914, 917, 920, 1606
BccI	CCATC	8 cut(s)	691, 766, 869, 1130, 1469, 1583, 1659, 1716
BciT130I	CCWGG	1 cut(s)	1440
BcnI	CCSGG	2 cut(s)	741, 1260
BcoDI	GTCTC	4 cut(s)	149, 755, 792, 1068
BcuI	ACTAGT	1 cut(s)	1322
BfaI	CTAG	6 cut(s)	117, 197, 653, 1323, 1397, 1586
BfmI	CTRYAG	7 cut(s)	354, 531, 687, 846, 900, 939, 1353
BfoI	RGCGCY	1 cut(s)	434
BisI	GCNGC	7 cut(s)	121, 357, 900, 903, 906, 909, 1595
BlsI	GCNGC	7 cut(s)	122, 358, 901, 904, 907, 910, 1596
Bme1390I	CCNGG	3 cut(s)	741, 1260, 1440
Bme18I	GGWCC	2 cut(s)	1436, 1533
BmeT110I	CYCGRG	1 cut(s)	80
BmgT120I	GGNCC	5 cut(s)	241, 649, 976, 1436, 1533
BmrFI	CCNGG	3 cut(s)	741, 1260, 1440
BmsI	GCATC	5 cut(s)	475, 631, 1177, 1319, 1654
BmtI	GCTAGC	1 cut(s)	120
BpiI	GAAGAC	1 cut(s)	1071
BplI	GAGNNNNNCTC	3 cut(s)	623, 655, 1731
BpmI	CTGGAG	1 cut(s)	182
Bpu10I	CCTNAGC	4 cut(s)	714, 895, 1119, 1717
BpuEI	CTTGAG	4 cut(s)	432, 874, 1011, 1579
BpuMI	CCSGG	2 cut(s)	741, 1260
BsaAI	YACGTR	2 cut(s)	379, 1286
BsaI	GGTCTC	1 cut(s)	1068
BsaJI	CCNNGG	4 cut(s)	247, 823, 1439, 1449
BsaWI	WCCGGW	1 cut(s)	52
BsaXI	ACNNNNNCTCC	2 cut(s)	752, 782
Bsc4I	CCNNNNNNNGG	5 cut(s)	214, 334, 502, 918, 985
Bse1I	ACTGG	3 cut(s)	165, 963, 1337
Bse3DI	GCAATG	1 cut(s)	42
BseBI	CCWGG	1 cut(s)	1440
BseDI	CCNNGG	4 cut(s)	247, 823, 1439, 1449
BseGI	GGATG	7 cut(s)	396, 724, 880, 1274, 1480, 1651, 1727
BseLI	CCNNNNNNNGG	5 cut(s)	214, 334, 502, 918, 985
BseMI	GCAATG	1 cut(s)	42
BseMII	CTCAG	4 cut(s)	1110, 1164, 1439, 1731
BseNI	ACTGG	3 cut(s)	165, 963, 1337
BseRI	GAGGAG	3 cut(s)	179, 230, 294
BseXI	GCAGC	7 cut(s)	132, 368, 886, 914, 917, 920, 1606
BseYI	CCCAGC	2 cut(s)	302, 400
Bsh1236I	CGCG	1 cut(s)	318
BshFI	GGCC	4 cut(s)	243, 651, 962, 977
BsiHKAI	GWGCWC	3 cut(s)	81, 1650, 1662
BsiHKCI	CYCGRG	1 cut(s)	80
BsiSI	CCGG	3 cut(s)	53, 741, 1260
BslFI	GGGAC	3 cut(s)	31, 44, 612
BslI	CCNNNNNNNGG	5 cut(s)	214, 334, 502, 918, 985
BsmAI	GTCTC	4 cut(s)	149, 755, 792, 1068
BsmFI	GGGAC	3 cut(s)	31, 44, 612
BsmI	GAATGC	2 cut(s)	715, 1444
BsnI	GGCC	4 cut(s)	243, 651, 962, 977
Bso31I	GGTCTC	1 cut(s)	1068
BsoBI	CYCGRG	1 cut(s)	80
Bsp1286I	GDGCHC	4 cut(s)	81, 91, 1650, 1662
Bsp143I	GATC	7 cut(s)	133, 168, 733, 841, 921, 1033, 1501
BspACI	CCGC	3 cut(s)	256, 285, 316
BspANI	GGCC	4 cut(s)	243, 651, 962, 977
BspCNI	CTCAG	4 cut(s)	1111, 1165, 1438, 1730
BspFNI	CGCG	1 cut(s)	318
BspHI	TCATGA	2 cut(s)	1036, 1754
BspMAI	CTGCAG	4 cut(s)	358, 904, 943, 1357
BspOI	GCTAGC	1 cut(s)	120
BspPI	GGATC	2 cut(s)	836, 929
BspTNI	GGTCTC	1 cut(s)	1068
BsrDI	GCAATG	1 cut(s)	42
BsrI	ACTGG	3 cut(s)	165, 963, 1337
BssECI	CCNNGG	4 cut(s)	247, 823, 1439, 1449
BssMI	GATC	7 cut(s)	133, 168, 733, 841, 921, 1033, 1501
BssT1I	CCWWGG	1 cut(s)	823
Bst2UI	CCWGG	1 cut(s)	1440
Bst4CI	ACNGT	7 cut(s)	323, 672, 850, 1070, 1524, 1571, 1579
Bst6I	CTCTTC	3 cut(s)	231, 1059, 1126
BstAPI	GCANNNNNTGC	1 cut(s)	1385
BstBAI	YACGTR	2 cut(s)	379, 1286
BstC8I	GCNNGC	3 cut(s)	118, 435, 1599
BstDEI	CTNAG	8 cut(s)	714, 862, 895, 1119, 1173, 1295, 1425, 1717
BstDSI	CCRYGG	2 cut(s)	247, 1449
BstEII	GGTNACC	1 cut(s)	1332
BstENI	CCTNNNNNAGG	3 cut(s)	212, 332, 983
BstF5I	GGATG	7 cut(s)	396, 724, 880, 1274, 1480, 1651, 1727
BstFNI	CGCG	1 cut(s)	318
BstH2I	RGCGCY	1 cut(s)	434
BstHHI	GCGC	2 cut(s)	433, 439
BstKTI	GATC	7 cut(s)	136, 171, 736, 844, 924, 1036, 1504
BstMAI	GTCTC	4 cut(s)	149, 755, 792, 1068
BstMBI	GATC	7 cut(s)	133, 168, 733, 841, 921, 1033, 1501
BstMWI	GCNNNNNNNGC	7 cut(s)	443, 905, 908, 974, 1269, 1385, 1591
BstNI	CCWGG	1 cut(s)	1440
BstNSI	RCATGY	1 cut(s)	25
BstPI	GGTNACC	1 cut(s)	1332
BstSCI	CCNGG	3 cut(s)	739, 1258, 1438
BstSFI	CTRYAG	7 cut(s)	354, 531, 687, 846, 900, 939, 1353
BstSNI	TACGTA	2 cut(s)	379, 1286
BstUI	CGCG	1 cut(s)	318
BstV1I	GCAGC	7 cut(s)	132, 368, 886, 914, 917, 920, 1606
BstV2I	GAAGAC	1 cut(s)	1071
BsuRI	GGCC	4 cut(s)	243, 651, 962, 977
BtgI	CCRYGG	2 cut(s)	247, 1449
BtsCI	GGATG	7 cut(s)	396, 724, 880, 1274, 1480, 1651, 1727
BtsIMutI	CAGTG	7 cut(s)	158, 970, 1075, 1308, 1576, 1584, 1731
Cac8I	GCNNGC	3 cut(s)	118, 435, 1599
CaiI	CAGNNNCTG	2 cut(s)	979, 1307
CciI	TCATGA	2 cut(s)	1036, 1754
CfoI	GCGC	2 cut(s)	433, 439
Cfr13I	GGNCC	5 cut(s)	241, 649, 976, 1436, 1533
CseI	GACGC	2 cut(s)	41, 1385
Csp6I	GTAC	1 cut(s)	220
CviAII	CATG	5 cut(s)	22, 642, 765, 1037, 1755
CviQI	GTAC	1 cut(s)	220
DdeI	CTNAG	8 cut(s)	714, 862, 895, 1119, 1173, 1295, 1425, 1717
DpnI	GATC	7 cut(s)	135, 170, 735, 843, 923, 1035, 1503
DpnII	GATC	7 cut(s)	133, 168, 733, 841, 921, 1033, 1501
Eam1104I	CTCTTC	3 cut(s)	231, 1059, 1126
EarI	CTCTTC	3 cut(s)	231, 1059, 1126
EciI	GGCGGA	1 cut(s)	300
Eco105I	TACGTA	2 cut(s)	379, 1286
Eco130I	CCWWGG	1 cut(s)	823
Eco24I	GRGCYC	1 cut(s)	91
Eco31I	GGTCTC	1 cut(s)	1068
Eco47I	GGWCC	2 cut(s)	1436, 1533
Eco57I	CTGAAG	5 cut(s)	113, 494, 951, 1083, 1755
Eco88I	CYCGRG	1 cut(s)	80
Eco91I	GGTNACC	1 cut(s)	1332
EcoNI	CCTNNNNNAGG	3 cut(s)	212, 332, 983
EcoO109I	RGGNCCY	2 cut(s)	241, 976
EcoO65I	GGTNACC	1 cut(s)	1332
EcoRII	CCWGG	1 cut(s)	1438
EcoT14I	CCWWGG	1 cut(s)	823
EcoT38I	GRGCYC	1 cut(s)	91
ErhI	CCWWGG	1 cut(s)	823
FaeI	CATG	5 cut(s)	25, 645, 768, 1040, 1758
FalI	AAGNNNNNCTT	2 cut(s)	1602, 1634
FaqI	GGGAC	3 cut(s)	31, 44, 612
FatI	CATG	5 cut(s)	21, 641, 764, 1036, 1754
FauI	CCCGC	1 cut(s)	323
FblI	GTMKAC	1 cut(s)	18
Fnu4HI	GCNGC	7 cut(s)	121, 357, 900, 903, 906, 909, 1595
FokI	GGATG	7 cut(s)	383, 731, 887, 1261, 1487, 1638, 1734
FriOI	GRGCYC	1 cut(s)	91
Fsp4HI	GCNGC	7 cut(s)	121, 357, 900, 903, 906, 909, 1595
FspBI	CTAG	6 cut(s)	117, 197, 653, 1323, 1397, 1586
GlaI	GCGC	2 cut(s)	432, 438
GluI	GCNGC	7 cut(s)	121, 357, 900, 903, 906, 909, 1595
GsaI	CCCAGC	2 cut(s)	306, 404
GsuI	CTGGAG	1 cut(s)	182
HaeII	RGCGCY	1 cut(s)	434
HaeIII	GGCC	4 cut(s)	243, 651, 962, 977
HapII	CCGG	3 cut(s)	53, 741, 1260
HgaI	GACGC	2 cut(s)	41, 1385
HhaI	GCGC	2 cut(s)	433, 439
Hin1II	CATG	5 cut(s)	25, 645, 768, 1040, 1758
Hin6I	GCGC	2 cut(s)	431, 437
HinP1I	GCGC	2 cut(s)	431, 437
HincII	GTYRAC	2 cut(s)	19, 547
HindII	GTYRAC	2 cut(s)	19, 547
HindIII	AAGCTT	1 cut(s)	409
HinfI	GANTC	5 cut(s)	309, 600, 1088, 1103, 1163
HpaI	GTTAAC	1 cut(s)	547
HpaII	CCGG	3 cut(s)	53, 741, 1260
HphI	GGTGA	7 cut(s)	163, 304, 660, 839, 882, 1054, 1490
Hpy166II	GTNNAC	4 cut(s)	19, 203, 547, 608
Hpy188I	TCNGA	4 cut(s)	93, 1315, 1404, 1465
Hpy8I	GTNNAC	4 cut(s)	19, 203, 547, 608
HpyAV	CCTTC	5 cut(s)	104, 225, 979, 1385, 1730
HpyCH4III	ACNGT	7 cut(s)	323, 672, 850, 1070, 1524, 1571, 1579
HpyCH4IV	ACGT	3 cut(s)	178, 378, 1285
HpyF10VI	GCNNNNNNNGC	7 cut(s)	443, 905, 908, 974, 1269, 1385, 1591
HpyF3I	CTNAG	8 cut(s)	714, 862, 895, 1119, 1173, 1295, 1425, 1717
HpySE526I	ACGT	3 cut(s)	178, 378, 1285
Hsp92II	CATG	5 cut(s)	25, 645, 768, 1040, 1758
HspAI	GCGC	2 cut(s)	431, 437
KspAI	GTTAAC	1 cut(s)	547
Kzo9I	GATC	7 cut(s)	133, 168, 733, 841, 921, 1033, 1501
LmnI	GCTCC	3 cut(s)	287, 1653, 1739
Lsp1109I	GCAGC	7 cut(s)	132, 368, 886, 914, 917, 920, 1606
LweI	GCATC	5 cut(s)	475, 631, 1177, 1319, 1654
MaeI	CTAG	6 cut(s)	117, 197, 653, 1323, 1397, 1586
MaeII	ACGT	3 cut(s)	178, 378, 1285
MaeIII	GTNAC	4 cut(s)	1303, 1318, 1332, 1573
MalI	GATC	7 cut(s)	135, 170, 735, 843, 923, 1035, 1503
MboI	GATC	7 cut(s)	133, 168, 733, 841, 921, 1033, 1501
MhlI	GDGCHC	4 cut(s)	81, 91, 1650, 1662
MlyI	GAGTC	1 cut(s)	594
MmeI	TCCRAC	3 cut(s)	256, 738, 1222
MseI	TTAA	5 cut(s)	546, 1155, 1347, 1526, 1637
MslI	CAYNNNNRTG	1 cut(s)	627
MspA1I	CMGCKG	2 cut(s)	359, 530
MspI	CCGG	3 cut(s)	53, 741, 1260
MspR9I	CCNGG	3 cut(s)	741, 1260, 1440
Mva1269I	GAATGC	2 cut(s)	715, 1444
MvaI	CCWGG	1 cut(s)	1440
MvnI	CGCG	1 cut(s)	318
MwoI	GCNNNNNNNGC	7 cut(s)	443, 905, 908, 974, 1269, 1385, 1591
NciI	CCSGG	2 cut(s)	741, 1260
NdeII	GATC	7 cut(s)	133, 168, 733, 841, 921, 1033, 1501
NheI	GCTAGC	1 cut(s)	116
NlaIII	CATG	5 cut(s)	25, 645, 768, 1040, 1758
NmuCI	GTSAC	2 cut(s)	1303, 1318
NspI	RCATGY	1 cut(s)	25
PaeR7I	CTCGAG	1 cut(s)	80
PagI	TCATGA	2 cut(s)	1036, 1754
PciI	ACATGT	1 cut(s)	21
PctI	GAATGC	2 cut(s)	715, 1444
PfeI	GAWTC	4 cut(s)	309, 1088, 1103, 1163
PfoI	TCCNGGA	1 cut(s)	739
PkrI	GCNGC	7 cut(s)	122, 358, 901, 904, 907, 910, 1596
PleI	GAGTC	1 cut(s)	594
PpsI	GAGTC	1 cut(s)	594
Ppu21I	YACGTR	2 cut(s)	379, 1286
PscI	ACATGT	1 cut(s)	21
Psp6I	CCWGG	1 cut(s)	1438
PspEI	GGTNACC	1 cut(s)	1332
PspFI	CCCAGC	2 cut(s)	302, 400
PspGI	CCWGG	1 cut(s)	1438
PspPI	GGNCC	5 cut(s)	241, 649, 976, 1436, 1533
PsrI	GAACNNNNNNTAC	2 cut(s)	1672, 1704
PstI	CTGCAG	4 cut(s)	358, 904, 943, 1357
PstNI	CAGNNNCTG	2 cut(s)	979, 1307
PvuII	CAGCTG	2 cut(s)	359, 530
RsaI	GTAC	1 cut(s)	221
RsaNI	GTAC	1 cut(s)	220
RseI	CAYNNNNRTG	1 cut(s)	627
SalI	GTCGAC	1 cut(s)	17
SaqAI	TTAA	5 cut(s)	546, 1155, 1347, 1526, 1637
SatI	GCNGC	7 cut(s)	121, 357, 900, 903, 906, 909, 1595
Sau3AI	GATC	7 cut(s)	133, 168, 733, 841, 921, 1033, 1501
Sau96I	GGNCC	5 cut(s)	241, 649, 976, 1436, 1533
SchI	GAGTC	1 cut(s)	594
ScrFI	CCNGG	3 cut(s)	741, 1260, 1440
SduI	GDGCHC	4 cut(s)	81, 91, 1650, 1662
SfaNI	GCATC	5 cut(s)	475, 631, 1177, 1319, 1654
SfcI	CTRYAG	7 cut(s)	354, 531, 687, 846, 900, 939, 1353
Sfr274I	CTCGAG	1 cut(s)	80
SinI	GGWCC	2 cut(s)	1436, 1533
SlaI	CTCGAG	1 cut(s)	80
SmiMI	CAYNNNNRTG	1 cut(s)	627
SmlI	CTYRAG	5 cut(s)	80, 447, 853, 1026, 1558
SmoI	CTYRAG	5 cut(s)	80, 447, 853, 1026, 1558
SnaBI	TACGTA	2 cut(s)	379, 1286
SpeI	ACTAGT	1 cut(s)	1322
SsiI	CCGC	3 cut(s)	256, 285, 316
SspMI	CTAG	6 cut(s)	117, 197, 653, 1323, 1397, 1586
StyD4I	CCNGG	3 cut(s)	739, 1258, 1438
StyI	CCWWGG	1 cut(s)	823
TaaI	ACNGT	7 cut(s)	323, 672, 850, 1070, 1524, 1571, 1579
TaiI	ACGT	3 cut(s)	181, 381, 1288
TaqI	TCGA	5 cut(s)	18, 26, 81, 693, 1670
TfiI	GAWTC	4 cut(s)	309, 1088, 1103, 1163
Tru1I	TTAA	5 cut(s)	546, 1155, 1347, 1526, 1637
Tru9I	TTAA	5 cut(s)	546, 1155, 1347, 1526, 1637
TscAI	CASTG	7 cut(s)	165, 970, 1075, 1308, 1576, 1584, 1738
TseFI	GTSAC	2 cut(s)	1303, 1318
TseI	GCWGC	7 cut(s)	120, 356, 899, 902, 905, 908, 1594
Tsp45I	GTSAC	2 cut(s)	1303, 1318
TspDTI	ATGAA	2 cut(s)	579, 1110
TspGWI	ACGGA	2 cut(s)	236, 1438
TspRI	CASTG	7 cut(s)	165, 970, 1075, 1308, 1576, 1584, 1738
VpaK11BI	GGWCC	2 cut(s)	1436, 1533
XagI	CCTNNNNNAGG	3 cut(s)	212, 332, 983
XceI	RCATGY	1 cut(s)	25
XhoI	CTCGAG	1 cut(s)	80
XmiI	GTMKAC	1 cut(s)	18
XspI	CTAG	6 cut(s)	117, 197, 653, 1323, 1397, 1586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.