Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000396.1

Orthogroup ID

OG0005757

Physical Location & Seq

Genomic Coordinates Forward (+)

23396 .. 31187

Gene Structure 7792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000396.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

atgactactaagcgcgcttacaaattacaggaattcgtagcacatacttccgccgtcaattgcctcaagattggcaggaaaacttccagggttcttgttactggcggagaagatcacaaggtcaatctttgggccattggcaaacccaatgccttactcagtttgtctggacacaccagtggcattgattcagtaagctttgattcttcagaggtcttagtagctgcaggtgctgcaagtggtacaattaagctttgggatttggaggaggcaaaaattgttcgcacccttactggtcacagatccaattgtatatctgtcgacttccatccttttggagagttctttgcatctggctccctggacacaaatttaaaaatatgggatatcaggaagaaggggtgtattcacacatacaaaggccacacacgaggagtcaatgctatcaggtttaccccagatggacgttgggttgtttctggtggagaggacaacactgtgaagttgtgggatctgactgctggaaagctcctgcatgattttaaatgtcatgagggccagatacaatgcatagactttcatccccatgaattcctgctagcaacaggttcggcagataggacagttaaattttgggatcttgaaacctttgagctaattggctccgctggacctgagacaactggagtgcgttctttgacttttagtccggatgggagggccctactctgtggattgcatgaaagtttgaaggtattctcgtgggaaccaataagatgccatgatgccgtggatgtgggatggtcgcgattatcagatcttaatgttcatgaggggaagcttcttggatgctcctacaatcagagttgtgttggagtgtgggttgtagacatctcgcgcattgagccatatgcaatcggtaatgctagcagattgaatgggcactcagaatcaaaaccattgtctggtggtaatctgtcagtactcaatgagaacgctgctagatccagtttgggccggctctctgtttcccaaagttcagattctctagtgaaggaaacaaaatctcttggaaggttatcagtttcccaaaattcagatcccgccaaggagccaaaatttttgacatccactggaagtgttcctggtactcctcaaaggatcagtctgaactccagtccaaaaactattgtcgctagttcagtgtcagttcctagtgcaacaaccctgaaaaggaattccgtcaagaccagtgttccgacctttaacaagtcggatgtcatacctgtaattgtgcctagaactagtgtcaggtcagagctggcagccgagtctagaaaagaagccagtgttgctggaagaacaatgccattctcttcgcagtcaaagacgaatgatttccgaaagttttccaataccagagaagaagtggataagccaactgtctctatagtgtctgaatcgacgacttctaaggctactgagttaagcagtgctgtagatgggagtggtttttcaacagttataagctcaagccaaggaatcgataccgaaaaaaacatgaaggatgacagatgcattggacctgggaaacaggaaacaagttcactgatggagccaactgctagctaccagcatgaaagttctgaaactcgagggcataaggtgatgagagatgcatactctgctgaaggtcaaagaggaggtagaatgaggtcaattgctgtaaattttgagagaagagatagatattctaactacgagggacctacctccgattctaccatggtaacagcatctggaatgaaccctttgaatgcgtttaagcagagaggctatcctacatctactgaaaaagaaacggtatctgctagtgatgaggatgctattgcagatcttttggaaaaacatgaccaatttgttagctccatgcaatctcgttcagccaagttacaggcagtctatagatattggcagagaaatgatgttaagggggtaattggtgcgatggagaagatgtcggatcatgctgtcattgctgatgtaattagcattatggcggacaaaattgacattgtcaccctggatgtatgcacttgtcttctgccactcctcactggccttctagaaagcaacatggacaggcatttaggcatttctttagaaatgctgctcaagctggttagaatatttggttctgttatctattcaacattatcagcatcatcatctgttggtgtagatattgaagccgagcaaaggctggagcgttgcaacatgtgtttcatggagcttgaaaaggtcaaatgctgtttgcctgctcttaccagaagaggaggatcaattgcaaagtctgcacaagagttgaatttagctcttcaagaagtttcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0031461 GO:0032991 GO:0044424 GO:0044464 GO:0080008 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Katanin_con80 WD40

Protein Analysis

797

Amino Acids

86.76

Weight (kDa)

7.56

Isoelectric Point (pI)

34.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005757)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08390 AT5G23430 AT5G23430 AT5G23430
fragaria_vesca	FvH4_4g37370 FvH4_4g37370 FvH4_4g37370
malus_domestica	MD13G1000300.v1.1 MD16G1005500.v1.1
prunus_persica	Prupe.1G352400_v2.0.a1 Prupe.1G352400_v2.0.a1 Prupe.1G352400_v2.0.a1 Prupe.1G352400_v2.0.a1
pyrus_communis	pycom13g00030 pycom2749g00060
rosa_chinensis	RchiOBHm_Chr4g0447261
rosa_laevigata	RLG00000005592
rosa_multiflora	Rmu_ssc0000396.1_g000004
rosa_roxburghii	Rroxscaffold_5G00387620
rosa_rugosa	Rorug04G0379100 Rorug04G0379200 Rorug04G0379300 Rorug04G0379400
rosa_samantha	Rh4AG440700 Rh4BG449700 Rh4CG466900 Rh4DG448200
rosa_wichuraiana	Rw4G037710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1526
AarI	CACCTGC	1 cut(s)	218
Acc36I	ACCTGC	1 cut(s)	218
AccB7I	CCANNNNNTGG	1 cut(s)	965
AccI	GTMKAC	2 cut(s)	321, 888
AccII	CGCG	3 cut(s)	15, 808, 898
AccIII	TCCGGA	1 cut(s)	709
AciI	CCGC	5 cut(s)	51, 105, 666, 1104, 2060
AclWI	GGATC	8 cut(s)	297, 519, 645, 999, 1094, 1169, 2031, 2347
AcsI	RAATTY	9 cut(s)	32, 370, 590, 629, 1093, 1118, 1237, 1729, 2368
AcuI	CTGAAG	2 cut(s)	192, 1710
AfaI	GTAC	3 cut(s)	244, 984, 1150
AfiI	CCNNNNNNNGG	3 cut(s)	965, 1233, 2259
AflIII	ACRYGT	1 cut(s)	2277
AhdI	GACNNNNNGTC	1 cut(s)	705
AhlI	ACTAGT	1 cut(s)	1304
AjnI	CCWGG	5 cut(s)	86, 360, 1144, 1585, 2082
AleI	CACNNNNGTG	1 cut(s)	177
Alw26I	GTCTC	2 cut(s)	671, 1450
AlwI	GGATC	8 cut(s)	297, 519, 645, 999, 1094, 1169, 2031, 2347
AlwNI	CAGNNNCTG	2 cut(s)	233, 1799
Ama87I	CYCGRG	1 cut(s)	1653
Aor13HI	TCCGGA	1 cut(s)	709
AoxI	GGCC	6 cut(s)	132, 421, 556, 720, 1015, 2119
ApaI	GGGCCC	1 cut(s)	724
ApeKI	GCWGC	5 cut(s)	224, 233, 998, 1325, 2170
ApoI	RAATTY	9 cut(s)	32, 370, 590, 629, 1093, 1118, 1237, 1729, 2368
ArsI	GACNNNNNNTTYG	4 cut(s)	947, 979, 1150, 1182
Asp700I	GAANNNNTTC	3 cut(s)	755, 1397, 1408
AspLEI	GCGC	3 cut(s)	15, 17, 900
AspS9I	GGNCC	8 cut(s)	132, 556, 671, 720, 721, 1015, 1583, 1766
AsuHPI	GGTGA	2 cut(s)	1678, 2071
AsuNHI	GCTAGC	3 cut(s)	598, 926, 1625
AvaI	CYCGRG	1 cut(s)	1653
AvaII	GGWCC	3 cut(s)	671, 1583, 1766
BaeGI	GKGCMC	2 cut(s)	724, 945
BanII	GRGCYC	1 cut(s)	724
BauI	CACGAG	2 cut(s)	429, 760
BbsI	GAAGAC	1 cut(s)	2093
BbvI	GCAGC	5 cut(s)	211, 220, 985, 1337, 2157
BccI	CCATC	7 cut(s)	336, 455, 707, 795, 1496, 1606, 2002
BceAI	ACGGC	2 cut(s)	38, 773
BcgI	CGANNNNNNTGC	2 cut(s)	591, 625
BciT130I	CCWGG	5 cut(s)	88, 362, 1146, 1587, 2084
BcoDI	GTCTC	2 cut(s)	671, 1450
BcuI	ACTAGT	1 cut(s)	1304
BfmI	CTRYAG	4 cut(s)	225, 1449, 1497, 1963
BfuAI	ACCTGC	1 cut(s)	218
BglII	AGATCT	2 cut(s)	817, 1894
BisI	GCNGC	5 cut(s)	225, 234, 999, 1326, 2171
BlsI	GCNGC	5 cut(s)	226, 235, 1000, 1327, 2172
BmcAI	AGTACT	1 cut(s)	984
Bme1390I	CCNGG	5 cut(s)	88, 362, 1146, 1587, 2084
Bme18I	GGWCC	3 cut(s)	671, 1583, 1766
BmeRI	GACNNNNNGTC	1 cut(s)	705
BmeT110I	CYCGRG	1 cut(s)	1653
BmgT120I	GGNCC	8 cut(s)	132, 556, 671, 720, 721, 1015, 1583, 1766
BmiI	GGNNCC	7 cut(s)	358, 664, 722, 768, 1113, 1617, 1767
BmrFI	CCNGG	5 cut(s)	88, 362, 1146, 1587, 2084
BmsI	GCATC	9 cut(s)	359, 767, 775, 839, 1565, 1666, 1805, 1873, 2231
BmtI	GCTAGC	3 cut(s)	602, 930, 1629
BpiI	GAAGAC	1 cut(s)	2093
BpmI	CTGGAG	3 cut(s)	705, 1159, 2285
BpuEI	CTTGAG	3 cut(s)	50, 1516, 2159
Bsa29I	ATCGAT	1 cut(s)	1545
BsaJI	CCNNGG	8 cut(s)	87, 360, 789, 1107, 1537, 1586, 1785, 2082
BsaWI	WCCGGW	1 cut(s)	709
BsaXI	ACNNNNNCTCC	4 cut(s)	867, 897, 2003, 2033
Bsc4I	CCNNNNNNNGG	3 cut(s)	965, 1233, 2259
Bse118I	RCCGGY	1 cut(s)	1017
Bse3DI	GCAATG	1 cut(s)	2034
BseAI	TCCGGA	1 cut(s)	709
BseBI	CCWGG	5 cut(s)	88, 362, 1146, 1587, 2084
BseCI	ATCGAT	1 cut(s)	1545
BseDI	CCNNGG	8 cut(s)	87, 360, 789, 1107, 1537, 1586, 1785, 2082
BseLI	CCNNNNNNNGG	3 cut(s)	965, 1233, 2259
BseMI	GCAATG	1 cut(s)	2034
BseMII	CTCAG	4 cut(s)	172, 666, 960, 1473
BsePI	GCGCGC	1 cut(s)	13
BseRI	GAGGAG	6 cut(s)	281, 447, 1143, 1716, 2102, 2349
BseSI	GKGCMC	2 cut(s)	724, 945
BseXI	GCAGC	5 cut(s)	211, 220, 985, 1337, 2157
BsgI	GTGCAG	1 cut(s)	2340
Bsh1236I	CGCG	3 cut(s)	15, 808, 898
BshFI	GGCC	6 cut(s)	134, 423, 558, 722, 1017, 2121
BshVI	ATCGAT	1 cut(s)	1545
BsiHKCI	CYCGRG	1 cut(s)	1653
BsiSI	CCGG	2 cut(s)	710, 1018
BslFI	GGGAC	1 cut(s)	1779
BslI	CCNNNNNNNGG	3 cut(s)	965, 1233, 2259
BsmAI	GTCTC	2 cut(s)	671, 1450
BsmFI	GGGAC	1 cut(s)	1779
BsmI	GAATGC	1 cut(s)	1822
BsnI	GGCC	6 cut(s)	134, 423, 558, 722, 1017, 2121
BsoBI	CYCGRG	1 cut(s)	1653
Bsp120I	GGGCCC	1 cut(s)	720
Bsp1286I	GDGCHC	2 cut(s)	724, 945
Bsp13I	TCCGGA	1 cut(s)	709
Bsp19I	CCATGG	1 cut(s)	1785
Bsp68I	TCGCGA	1 cut(s)	808
BspACI	CCGC	5 cut(s)	51, 105, 666, 1104, 2060
BspANI	GGCC	6 cut(s)	134, 423, 558, 722, 1017, 2121
BspCNI	CTCAG	4 cut(s)	171, 667, 959, 1474
BspDI	ATCGAT	1 cut(s)	1545
BspEI	TCCGGA	1 cut(s)	709
BspFNI	CGCG	3 cut(s)	15, 808, 898
BspHI	TCATGA	3 cut(s)	550, 829, 2390
BspLI	GGNNCC	7 cut(s)	358, 664, 722, 768, 1113, 1617, 1767
BspMAI	CTGCAG	1 cut(s)	229
BspMI	ACCTGC	1 cut(s)	218
BspOI	GCTAGC	3 cut(s)	602, 930, 1629
BspPI	GGATC	8 cut(s)	297, 519, 645, 999, 1094, 1169, 2031, 2347
BspQI	GCTCTTC	1 cut(s)	2382
BsrDI	GCAATG	1 cut(s)	2034
BsrFI	RCCGGY	1 cut(s)	1017
BssAI	RCCGGY	1 cut(s)	1017
BssECI	CCNNGG	8 cut(s)	87, 360, 789, 1107, 1537, 1586, 1785, 2082
BssHII	GCGCGC	1 cut(s)	13
BssSI	CACGAG	2 cut(s)	429, 760
BssT1I	CCWWGG	3 cut(s)	1107, 1537, 1785
Bst2BI	CACGAG	2 cut(s)	429, 760
Bst2UI	CCWGG	5 cut(s)	88, 362, 1146, 1587, 2084
Bst4CI	ACNGT	5 cut(s)	499, 625, 1444, 1522, 1864
Bst6I	CTCTTC	4 cut(s)	1381, 1735, 2326, 2382
BstAPI	GCANNNNNTGC	3 cut(s)	233, 1685, 2354
BstC8I	GCNNGC	7 cut(s)	15, 600, 928, 1019, 1323, 1627, 2319
BstDEI	CTNAG	7 cut(s)	9, 158, 217, 675, 946, 1473, 1482
BstDSI	CCRYGG	2 cut(s)	789, 1785
BstFNI	CGCG	3 cut(s)	15, 808, 898
BstHHI	GCGC	3 cut(s)	15, 17, 900
BstMAI	GTCTC	2 cut(s)	671, 1450
BstMWI	GCNNNNNNNGC	8 cut(s)	230, 233, 904, 1352, 1685, 2036, 2176, 2354
BstNI	CCWGG	5 cut(s)	88, 362, 1146, 1587, 2084
BstNSI	RCATGY	1 cut(s)	2281
BstSCI	CCNGG	5 cut(s)	86, 360, 1144, 1585, 2082
BstSFI	CTRYAG	4 cut(s)	225, 1449, 1497, 1963
BstSLI	GKGCMC	2 cut(s)	724, 945
BstUI	CGCG	3 cut(s)	15, 808, 898
BstV1I	GCAGC	5 cut(s)	211, 220, 985, 1337, 2157
BstV2I	GAAGAC	1 cut(s)	2093
BstX2I	RGATCY	7 cut(s)	302, 511, 637, 817, 1004, 1099, 1894
BstXI	CCANNNNNNTGG	1 cut(s)	335
BstYI	RGATCY	7 cut(s)	302, 511, 637, 817, 1004, 1099, 1894
Bsu15I	ATCGAT	1 cut(s)	1545
BsuRI	GGCC	6 cut(s)	134, 423, 558, 722, 1017, 2121
BsuTUI	ATCGAT	1 cut(s)	1545
BtgI	CCRYGG	2 cut(s)	789, 1785
BtgZI	GCGATG	1 cut(s)	2021
BtsI	GCAGTG	1 cut(s)	1498
BtsIMutI	CAGTG	9 cut(s)	184, 495, 1131, 1209, 1258, 1354, 1498, 1607, 2115
BtuMI	TCGCGA	1 cut(s)	808
BveI	ACCTGC	1 cut(s)	218
Cac8I	GCNNGC	7 cut(s)	15, 600, 928, 1019, 1323, 1627, 2319
CaiI	CAGNNNCTG	2 cut(s)	233, 1799
CciI	TCATGA	3 cut(s)	550, 829, 2390
CfoI	GCGC	3 cut(s)	15, 17, 900
Cfr10I	RCCGGY	1 cut(s)	1017
Cfr13I	GGNCC	8 cut(s)	132, 556, 671, 720, 721, 1015, 1583, 1766
ClaI	ATCGAT	1 cut(s)	1545
Csp6I	GTAC	3 cut(s)	243, 983, 1149
CviQI	GTAC	3 cut(s)	243, 983, 1149
DdeI	CTNAG	7 cut(s)	9, 158, 217, 675, 946, 1473, 1482
DraI	TTTAAA	2 cut(s)	375, 544
DriI	GACNNNNNGTC	1 cut(s)	705
Eam1104I	CTCTTC	4 cut(s)	1381, 1735, 2326, 2382
Eam1105I	GACNNNNNGTC	1 cut(s)	705
EarI	CTCTTC	4 cut(s)	1381, 1735, 2326, 2382
EciI	GGCGGA	3 cut(s)	40, 120, 2075
Eco130I	CCWWGG	3 cut(s)	1107, 1537, 1785
Eco24I	GRGCYC	1 cut(s)	724
Eco32I	GATATC	1 cut(s)	388
Eco47I	GGWCC	3 cut(s)	671, 1583, 1766
Eco57I	CTGAAG	2 cut(s)	192, 1710
Eco88I	CYCGRG	1 cut(s)	1653
EcoO109I	RGGNCCY	3 cut(s)	720, 721, 1766
EcoRI	GAATTC	3 cut(s)	32, 590, 1237
EcoRII	CCWGG	5 cut(s)	86, 360, 1144, 1585, 2082
EcoRV	GATATC	1 cut(s)	388
EcoT14I	CCWWGG	3 cut(s)	1107, 1537, 1785
EcoT22I	ATGCAT	3 cut(s)	572, 1580, 1681
EcoT38I	GRGCYC	1 cut(s)	724
ErhI	CCWWGG	3 cut(s)	1107, 1537, 1785
FaqI	GGGAC	1 cut(s)	1779
FauI	CCCGC	1 cut(s)	1111
FauNDI	CATATG	1 cut(s)	910
FblI	GTMKAC	2 cut(s)	321, 888
Fnu4HI	GCNGC	5 cut(s)	225, 234, 999, 1326, 2171
FriOI	GRGCYC	1 cut(s)	724
Fsp4HI	GCNGC	5 cut(s)	225, 234, 999, 1326, 2171
GlaI	GCGC	3 cut(s)	14, 16, 899
GluI	GCNGC	5 cut(s)	225, 234, 999, 1326, 2171
GsuI	CTGGAG	3 cut(s)	705, 1159, 2285
HaeIII	GGCC	6 cut(s)	134, 423, 558, 722, 1017, 2121
HapII	CCGG	2 cut(s)	710, 1018
HhaI	GCGC	3 cut(s)	15, 17, 900
Hin6I	GCGC	3 cut(s)	13, 15, 898
HinP1I	GCGC	3 cut(s)	13, 15, 898
HincII	GTYRAC	1 cut(s)	322
HindII	GTYRAC	1 cut(s)	322
HindIII	AAGCTT	3 cut(s)	196, 251, 839
HinfI	GANTC	9 cut(s)	188, 203, 435, 950, 1043, 1331, 1460, 1542, 1778
HpaII	CCGG	2 cut(s)	710, 1018
HphI	GGTGA	2 cut(s)	1678, 2071
Hpy166II	GTNNAC	4 cut(s)	322, 453, 889, 1607
Hpy8I	GTNNAC	4 cut(s)	322, 453, 889, 1607
Hpy99I	CGWCG	1 cut(s)	1468
HpyAV	CCTTC	7 cut(s)	391, 745, 1048, 1068, 1558, 1685, 2132
HpyCH4III	ACNGT	5 cut(s)	499, 625, 1444, 1522, 1864
HpyCH4IV	ACGT	1 cut(s)	466
HpyF10VI	GCNNNNNNNGC	8 cut(s)	230, 233, 904, 1352, 1685, 2036, 2176, 2354
HpyF3I	CTNAG	7 cut(s)	9, 158, 217, 675, 946, 1473, 1482
HpySE526I	ACGT	1 cut(s)	466
HspAI	GCGC	3 cut(s)	13, 15, 898
Kpn2I	TCCGGA	1 cut(s)	709
KroI	GCCGGC	1 cut(s)	1017
KroNI	GCCGGC	1 cut(s)	1019
LguI	GCTCTTC	1 cut(s)	2382
LmnI	GCTCC	9 cut(s)	362, 534, 668, 857, 1111, 1615, 1931, 2266, 2290
Lsp1109I	GCAGC	5 cut(s)	211, 220, 985, 1337, 2157
LweI	GCATC	9 cut(s)	359, 767, 775, 839, 1565, 1666, 1805, 1873, 2231
MaeII	ACGT	1 cut(s)	466
MaeIII	GTNAC	5 cut(s)	97, 296, 1789, 1950, 2077
MfeI	CAATTG	4 cut(s)	58, 307, 1719, 2343
MflI	RGATCY	7 cut(s)	302, 511, 637, 817, 1004, 1099, 1894
MhlI	GDGCHC	2 cut(s)	724, 945
MlyI	GAGTC	2 cut(s)	444, 1340
MmeI	TCCRAC	4 cut(s)	853, 1254, 1283, 2001
Mph1103I	ATGCAT	3 cut(s)	572, 1580, 1681
MroI	TCCGGA	1 cut(s)	709
MroNI	GCCGGC	1 cut(s)	1017
MroXI	GAANNNNTTC	3 cut(s)	755, 1397, 1408
MseI	TTAA	9 cut(s)	249, 374, 543, 627, 822, 1266, 1487, 1824, 1989
MslI	CAYNNNNRTG	2 cut(s)	177, 585
MspA1I	CMGCKG	1 cut(s)	668
MspI	CCGG	2 cut(s)	710, 1018
MspR9I	CCNGG	5 cut(s)	88, 362, 1146, 1587, 2084
MunI	CAATTG	4 cut(s)	58, 307, 1719, 2343
Mva1269I	GAATGC	1 cut(s)	1822
MvaI	CCWGG	5 cut(s)	88, 362, 1146, 1587, 2084
MvnI	CGCG	3 cut(s)	15, 808, 898
MwoI	GCNNNNNNNGC	8 cut(s)	230, 233, 904, 1352, 1685, 2036, 2176, 2354
NaeI	GCCGGC	1 cut(s)	1019
NcoI	CCATGG	1 cut(s)	1785
NdeI	CATATG	1 cut(s)	910
NgoMIV	GCCGGC	1 cut(s)	1017
NheI	GCTAGC	3 cut(s)	598, 926, 1625
NlaIV	GGNNCC	7 cut(s)	358, 664, 722, 768, 1113, 1617, 1767
NmeAIII	GCCGAG	2 cut(s)	1354, 2278
NmuCI	GTSAC	2 cut(s)	296, 2077
NruI	TCGCGA	1 cut(s)	808
NsiI	ATGCAT	3 cut(s)	572, 1580, 1681
NspI	RCATGY	1 cut(s)	2281
OliI	CACNNNNGTG	1 cut(s)	177
PaeR7I	CTCGAG	1 cut(s)	1653
PagI	TCATGA	3 cut(s)	550, 829, 2390
PaqCI	CACCTGC	1 cut(s)	218
PauI	GCGCGC	1 cut(s)	13
PciI	ACATGT	1 cut(s)	2277
PciSI	GCTCTTC	1 cut(s)	2382
PctI	GAATGC	1 cut(s)	1822
PdiI	GCCGGC	1 cut(s)	1019
PdmI	GAANNNNTTC	3 cut(s)	755, 1397, 1408
PfeI	GAWTC	7 cut(s)	188, 203, 950, 1043, 1460, 1542, 1778
PflFI	GACNNNGTC	1 cut(s)	2075
PflMI	CCANNNNNTGG	1 cut(s)	965
PkrI	GCNGC	5 cut(s)	226, 235, 1000, 1327, 2172
PleI	GAGTC	2 cut(s)	443, 1339
PpsI	GAGTC	2 cut(s)	443, 1339
PpuMI	RGGWCCY	1 cut(s)	1766
PscI	ACATGT	1 cut(s)	2277
PsiI	TTATAA	1 cut(s)	1526
Psp5II	RGGWCCY	1 cut(s)	1766
Psp6I	CCWGG	5 cut(s)	86, 360, 1144, 1585, 2082
PspGI	CCWGG	5 cut(s)	86, 360, 1144, 1585, 2082
PspN4I	GGNNCC	7 cut(s)	358, 664, 722, 768, 1113, 1617, 1767
PspOMI	GGGCCC	1 cut(s)	720
PspPI	GGNCC	8 cut(s)	132, 556, 671, 720, 721, 1015, 1583, 1766
PspPPI	RGGWCCY	1 cut(s)	1766
PspXI	VCTCGAGB	1 cut(s)	1653
PstI	CTGCAG	1 cut(s)	229
PstNI	CAGNNNCTG	2 cut(s)	233, 1799
PsuI	RGATCY	7 cut(s)	302, 511, 637, 817, 1004, 1099, 1894
PsyI	GACNNNGTC	1 cut(s)	2075
PteI	GCGCGC	1 cut(s)	13
RruI	TCGCGA	1 cut(s)	808
RsaI	GTAC	3 cut(s)	244, 984, 1150
RsaNI	GTAC	3 cut(s)	243, 983, 1149
RseI	CAYNNNNRTG	2 cut(s)	177, 585
SalI	GTCGAC	1 cut(s)	320
SapI	GCTCTTC	1 cut(s)	2382
SaqAI	TTAA	9 cut(s)	249, 374, 543, 627, 822, 1266, 1487, 1824, 1989
SatI	GCNGC	5 cut(s)	225, 234, 999, 1326, 2171
Sau96I	GGNCC	8 cut(s)	132, 556, 671, 720, 721, 1015, 1583, 1766
ScaI	AGTACT	1 cut(s)	984
SchI	GAGTC	2 cut(s)	444, 1340
ScrFI	CCNGG	5 cut(s)	88, 362, 1146, 1587, 2084
SduI	GDGCHC	2 cut(s)	724, 945
SfaNI	GCATC	9 cut(s)	359, 767, 775, 839, 1565, 1666, 1805, 1873, 2231
SfcI	CTRYAG	4 cut(s)	225, 1449, 1497, 1963
Sfr274I	CTCGAG	1 cut(s)	1653
SinI	GGWCC	3 cut(s)	671, 1583, 1766
SlaI	CTCGAG	1 cut(s)	1653
SmiMI	CAYNNNNRTG	2 cut(s)	177, 585
SmlI	CTYRAG	4 cut(s)	65, 1531, 1653, 2174
SmoI	CTYRAG	4 cut(s)	65, 1531, 1653, 2174
SpeI	ACTAGT	1 cut(s)	1304
SsiI	CCGC	5 cut(s)	51, 105, 666, 1104, 2060
SspI	AATATT	1 cut(s)	2190
StyD4I	CCNGG	5 cut(s)	86, 360, 1144, 1585, 2082
StyI	CCWWGG	3 cut(s)	1107, 1537, 1785
TaaI	ACNGT	5 cut(s)	499, 625, 1444, 1522, 1864
TaiI	ACGT	1 cut(s)	469
TaqI	TCGA	4 cut(s)	321, 1463, 1545, 1654
TatI	WGTACW	1 cut(s)	982
TfiI	GAWTC	7 cut(s)	188, 203, 950, 1043, 1460, 1542, 1778
Tru1I	TTAA	9 cut(s)	249, 374, 543, 627, 822, 1266, 1487, 1824, 1989
Tru9I	TTAA	9 cut(s)	249, 374, 543, 627, 822, 1266, 1487, 1824, 1989
TscAI	CASTG	9 cut(s)	184, 502, 1138, 1209, 1258, 1354, 1498, 1614, 2122
TseFI	GTSAC	2 cut(s)	296, 2077
TseI	GCWGC	5 cut(s)	224, 233, 998, 1325, 2170
Tsp45I	GTSAC	2 cut(s)	296, 2077
TspDTI	ATGAA	9 cut(s)	569, 603, 756, 818, 1577, 1653, 1820, 2275, 2379
TspGWI	ACGGA	1 cut(s)	1231
TspRI	CASTG	9 cut(s)	184, 502, 1138, 1209, 1258, 1354, 1498, 1614, 2122
Tth111I	GACNNNGTC	1 cut(s)	2075
Van91I	CCANNNNNTGG	1 cut(s)	965
VpaK11BI	GGWCC	3 cut(s)	671, 1583, 1766
XapI	RAATTY	9 cut(s)	32, 370, 590, 629, 1093, 1118, 1237, 1729, 2368
XbaI	TCTAGA	2 cut(s)	1334, 2125
XceI	RCATGY	1 cut(s)	2281
XcmI	CCANNNNNNNNNTGG	2 cut(s)	465, 1426
XhoI	CTCGAG	1 cut(s)	1653
XmiI	GTMKAC	2 cut(s)	321, 888
XmnI	GAANNNNTTC	3 cut(s)	755, 1397, 1408
ZrmI	AGTACT	1 cut(s)	984
Zsp2I	ATGCAT	3 cut(s)	572, 1580, 1681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.