Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000412.1

Orthogroup ID

OG0010818

Physical Location & Seq

Genomic Coordinates Forward (+)

62068 .. 69599

Gene Structure 7532 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1236 bp

atgccacgtggcgcaatctggcatgttcgattggtgctcggccgcgtcacctggagactaacgatttcacatgtcggcgatcttgatccagacggcaccgtttttgctctctctggctcacaagcctcatccacctctgctcaattcgccggaaaaagatcaatcggtgcgggtctagggtttcagatctcgcactcttccaggtggggttatgttattgtggaggttcaatttgagaagctaaggttgggaacaatgcatgccaaggggacacaatcgtcttttcgggatcggacgcaggagttccacagtgtagcagagaggctaaagaagtcattctcgtcggcgccggggcccgggccgtcgcagaatggcccgactagtggatcgaaattccaggaacaacaatcggctgtggcgactcactccgagtttaataagagggcatccaaaattggattggggatacactccacgtcgcagaagcttggaaagctgacaaaattggcgaagaggacttctgtttttgatgatcctacaagggaaattcaggagctgacagcagttatcaagcaggatattaccgcactcaactctgcagtggtagaccttcagctcctatctcattccagaaatgaaagtgggaatatttctagtgacacgactagtcattcaaccacagttgtcgacgacctgaaaaatcggctcatgagcaccacaaaagagtttaaagaagtcctcaccatgcgaactgagaatttgaaggttcatgagaatagaagacaattgttttcgtctagtgcctccaaggaatccacaaatccttttgttcggcagcgcccactggctgctaggtcagctgctagttcttcaagtgcctctcctcctccatgggctaatggatcagcatcttcctcgcagttgttcccaaacggcgtcctcagcgtgttgctcggcggcggagccagcgacaggtcgccggcgaacaaccgcttcatgtattgggttttgctggaaatggtggagaggttgtctgagatggaaaaggaggagcgtttgcctggtaattactccaaggaggtgtggattaagaatgtgtttgaatcttgggagaagaagaatggtaagatgaaggcagagttagaagagtacagacatgctgttgaacttgagcgagtctcgctctcgcttgcaaaagggaatcttatggaggctgaagctggtgctttcgggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000149 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0006888 GO:0006906 GO:0006996 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016192 GO:0022406 GO:0031090 GO:0031201 GO:0031224 GO:0031984 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0048278 GO:0048284 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051649 GO:0061024 GO:0061025 GO:0071840 GO:0090174 GO:0098588 GO:0098791 GO:0098796 GO:0140056

KEGG Pathways

Metabolic & Signaling

ko04130 map04130

Pfam Domains

Protein Families

SNARE Syntaxin Syntaxin-5_N

Protein Analysis

411

Amino Acids

45.14

Weight (kDa)

9.69

Isoelectric Point (pI)

41.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Syntaxin-5_N	PF11416	93 - 111	1.2e-06	Syntaxin-5 N-terminal, Sly1p-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010818)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24350 AT3G24350
fragaria_vesca	FvH4_2g30200
malus_domestica	MD15G1114700.v1.1 MD15G1114800.v1.1 MD15G1190200.v1.1
prunus_persica	Prupe.1G466200_v2.0.a1 Prupe.1G466200_v2.0.a1 Prupe.7G226900_v2.0.a1
pyrus_communis	pycom15g10340
rosa_chinensis	RchiOBHm_Chr6g0312681
rosa_laevigata	RLG00000010304
rosa_multiflora	Rmu_sc0002859.1_g000001 Rmu_ssc0000412.1_g000010
rosa_roxburghii	Rroxscaffold_7G00156570
rosa_samantha	Rh6AG515700 Rh6BG527200 Rh6CG532100 Rh6DG518100
rosa_wichuraiana	Rw6G044810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	277
AccB1I	GGYRCC	2 cut(s)	95, 346
AccI	GTMKAC	2 cut(s)	606, 687
AccII	CGCG	1 cut(s)	45
AciI	CCGC	6 cut(s)	43, 170, 585, 957, 960, 991
AclWI	GGATC	5 cut(s)	80, 297, 394, 527, 910
AcoI	YGGCCR	1 cut(s)	40
AcsI	RAATTY	3 cut(s)	392, 546, 757
AcuI	CTGAAG	2 cut(s)	596, 1236
AcvI	CACGTG	1 cut(s)	8
AcyI	GRCGYC	2 cut(s)	347, 936
AfaI	GTAC	1 cut(s)	1151
AfiI	CCNNNNNNNGG	3 cut(s)	356, 383, 972
AflIII	ACRYGT	1 cut(s)	70
AgsI	TTSAA	6 cut(s)	230, 675, 763, 873, 1103, 1166
AhlI	ACTAGT	2 cut(s)	380, 665
AjiI	CACGTC	1 cut(s)	477
AjnI	CCWGG	4 cut(s)	50, 200, 396, 1060
AjuI	GAANNNNNNNTTGG	2 cut(s)	230, 262
AluBI	AGCT	7 cut(s)	241, 487, 496, 556, 616, 860, 1220
AluI	AGCT	7 cut(s)	241, 487, 496, 556, 616, 860, 1220
Alw21I	GWGCWC	2 cut(s)	39, 716
Alw26I	GTCTC	2 cut(s)	49, 1183
AlwI	GGATC	5 cut(s)	80, 297, 394, 527, 910
AlwNI	CAGNNNCTG	1 cut(s)	556
Ama87I	CYCGRG	1 cut(s)	356
AoxI	GGCC	4 cut(s)	40, 353, 359, 373
ApaI	GGGCCC	1 cut(s)	357
ApeKI	GCWGC	3 cut(s)	835, 848, 860
ApoI	RAATTY	3 cut(s)	392, 546, 757
Asp700I	GAANNNNTTC	1 cut(s)	335
AspLEI	GCGC	3 cut(s)	14, 349, 840
AspS9I	GGNCC	4 cut(s)	353, 354, 359, 374
AsuC2I	CCSGG	3 cut(s)	351, 357, 358
AsuHPI	GGTGA	2 cut(s)	40, 733
AvaI	CYCGRG	1 cut(s)	356
BaeGI	GKGCMC	1 cut(s)	357
BanI	GGYRCC	2 cut(s)	95, 346
BanII	GRGCYC	1 cut(s)	357
BbrPI	CACGTG	1 cut(s)	8
BbsI	GAAGAC	1 cut(s)	787
Bbv12I	GWGCWC	2 cut(s)	39, 716
BbvCI	CCTCAGC	1 cut(s)	941
BbvI	GCAGC	3 cut(s)	835, 847, 847
BccI	CCATC	1 cut(s)	1033
BceAI	ACGGC	3 cut(s)	109, 346, 949
BcgI	CGANNNNNNTGC	2 cut(s)	897, 931
BciT130I	CCWGG	4 cut(s)	52, 202, 398, 1062
BciVI	GTATCC	1 cut(s)	459
BcnI	CCSGG	3 cut(s)	351, 357, 358
BcoDI	GTCTC	2 cut(s)	49, 1183
BcuI	ACTAGT	2 cut(s)	380, 665
BfaI	CTAG	7 cut(s)	176, 381, 654, 666, 798, 852, 864
BfmI	CTRYAG	1 cut(s)	597
BfoI	RGCGCY	2 cut(s)	350, 841
BfuI	GTATCC	1 cut(s)	459
BglII	AGATCT	1 cut(s)	186
BisI	GCNGC	5 cut(s)	43, 836, 849, 861, 958
BlsI	GCNGC	5 cut(s)	44, 837, 850, 862, 959
Bme1390I	CCNGG	7 cut(s)	52, 202, 351, 357, 358, 398, 1062
BmeT110I	CYCGRG	1 cut(s)	356
BmgBI	CACGTC	1 cut(s)	477
BmgT120I	GGNCC	4 cut(s)	353, 354, 359, 374
BmiI	GGNNCC	5 cut(s)	97, 348, 354, 355, 964
BmrFI	CCNGG	7 cut(s)	52, 202, 351, 357, 358, 398, 1062
BmsI	GCATC	2 cut(s)	455, 917
BpiI	GAAGAC	1 cut(s)	787
BplI	GAGNNNNNCTC	4 cut(s)	1163, 1195, 1167, 1199
BpmI	CTGGAG	1 cut(s)	73
Bpu10I	CCTNAGC	2 cut(s)	242, 941
BpuEI	CTTGAG	1 cut(s)	1190
BpuMI	CCSGG	3 cut(s)	351, 357, 358
BsaAI	YACGTR	1 cut(s)	8
BsaBI	GATNNNNATC	2 cut(s)	84, 907
BsaHI	GRCGYC	2 cut(s)	347, 936
BsaJI	CCNNGG	6 cut(s)	264, 350, 356, 807, 890, 1074
BsaXI	ACNNNNNCTCC	2 cut(s)	1016, 1046
Bsc4I	CCNNNNNNNGG	3 cut(s)	356, 383, 972
Bse118I	RCCGGY	1 cut(s)	979
Bse1I	ACTGG	1 cut(s)	849
Bse8I	GATNNNNATC	2 cut(s)	84, 907
BseBI	CCWGG	4 cut(s)	52, 202, 398, 1062
BseDI	CCNNGG	6 cut(s)	264, 350, 356, 807, 890, 1074
BseGI	GGATG	2 cut(s)	128, 446
BseJI	GATNNNNATC	2 cut(s)	84, 907
BseLI	CCNNNNNNNGG	3 cut(s)	356, 383, 972
BseMII	CTCAG	3 cut(s)	744, 955, 1026
BseNI	ACTGG	1 cut(s)	849
BseRI	GAGGAG	3 cut(s)	873, 876, 1064
BseSI	GKGCMC	1 cut(s)	357
BseX3I	CGGCCG	1 cut(s)	40
BseXI	GCAGC	3 cut(s)	835, 847, 847
Bsh1236I	CGCG	1 cut(s)	45
Bsh1285I	CGRYCG	1 cut(s)	43
BshFI	GGCC	4 cut(s)	42, 355, 361, 375
BshNI	GGYRCC	2 cut(s)	95, 346
BsiEI	CGRYCG	1 cut(s)	43
BsiHKAI	GWGCWC	2 cut(s)	39, 716
BsiHKCI	CYCGRG	1 cut(s)	356
BsiSI	CCGG	4 cut(s)	150, 350, 357, 980
BslFI	GGGAC	1 cut(s)	283
BslI	CCNNNNNNNGG	3 cut(s)	356, 383, 972
BsmAI	GTCTC	2 cut(s)	49, 1183
BsmFI	GGGAC	1 cut(s)	283
BsnI	GGCC	4 cut(s)	42, 355, 361, 375
BsoBI	CYCGRG	1 cut(s)	356
Bsp120I	GGGCCC	1 cut(s)	353
Bsp1286I	GDGCHC	3 cut(s)	39, 357, 716
Bsp143I	GATC	8 cut(s)	79, 85, 158, 186, 289, 386, 532, 902
Bsp19I	CCATGG	1 cut(s)	890
BspACI	CCGC	6 cut(s)	43, 170, 585, 957, 960, 991
BspANI	GGCC	4 cut(s)	42, 355, 361, 375
BspCNI	CTCAG	3 cut(s)	745, 954, 1027
BspFNI	CGCG	1 cut(s)	45
BspHI	TCATGA	2 cut(s)	708, 769
BspLI	GGNNCC	5 cut(s)	97, 348, 354, 355, 964
BspMAI	CTGCAG	1 cut(s)	601
BspPI	GGATC	5 cut(s)	80, 297, 394, 527, 910
BspT107I	GGYRCC	2 cut(s)	95, 346
BsrFI	RCCGGY	1 cut(s)	979
BsrI	ACTGG	1 cut(s)	849
BssAI	RCCGGY	1 cut(s)	979
BssECI	CCNNGG	6 cut(s)	264, 350, 356, 807, 890, 1074
BssMI	GATC	8 cut(s)	79, 85, 158, 186, 289, 386, 532, 902
BssNI	GRCGYC	2 cut(s)	347, 936
BssT1I	CCWWGG	4 cut(s)	264, 807, 890, 1074
Bst2UI	CCWGG	4 cut(s)	52, 202, 398, 1062
Bst4CI	ACNGT	3 cut(s)	100, 311, 682
Bst6I	CTCTTC	3 cut(s)	202, 506, 1140
BstACI	GRCGYC	2 cut(s)	347, 936
BstBAI	YACGTR	1 cut(s)	8
BstC8I	GCNNGC	4 cut(s)	261, 967, 981, 1191
BstDEI	CTNAG	4 cut(s)	242, 753, 941, 1035
BstDSI	CCRYGG	1 cut(s)	890
BstF5I	GGATG	2 cut(s)	128, 446
BstFNI	CGCG	1 cut(s)	45
BstH2I	RGCGCY	2 cut(s)	350, 841
BstHHI	GCGC	3 cut(s)	14, 349, 840
BstKTI	GATC	8 cut(s)	82, 88, 161, 189, 292, 389, 535, 905
BstMAI	GTCTC	2 cut(s)	49, 1183
BstMBI	GATC	8 cut(s)	79, 85, 158, 186, 289, 386, 532, 902
BstMCI	CGRYCG	1 cut(s)	43
BstMWI	GCNNNNNNNGC	6 cut(s)	146, 493, 857, 942, 966, 1180
BstNI	CCWGG	4 cut(s)	52, 202, 398, 1062
BstNSI	RCATGY	4 cut(s)	26, 74, 263, 1160
BstSCI	CCNGG	7 cut(s)	50, 200, 349, 355, 356, 396, 1060
BstSFI	CTRYAG	1 cut(s)	597
BstSLI	GKGCMC	1 cut(s)	357
BstUI	CGCG	1 cut(s)	45
BstV1I	GCAGC	3 cut(s)	835, 847, 847
BstV2I	GAAGAC	1 cut(s)	787
BstX2I	RGATCY	1 cut(s)	186
BstYI	RGATCY	1 cut(s)	186
BstZI	CGGCCG	1 cut(s)	40
BsuI	GTATCC	1 cut(s)	459
BsuRI	GGCC	4 cut(s)	42, 355, 361, 375
BtgI	CCRYGG	1 cut(s)	890
BtrI	CACGTC	1 cut(s)	477
BtsCI	GGATG	2 cut(s)	128, 446
BtsI	GCAGTG	1 cut(s)	606
BtsIMutI	CAGTG	3 cut(s)	316, 606, 842
Cac8I	GCNNGC	4 cut(s)	261, 967, 981, 1191
CaiI	CAGNNNCTG	1 cut(s)	556
CciI	TCATGA	2 cut(s)	708, 769
CfoI	GCGC	3 cut(s)	14, 349, 840
Cfr10I	RCCGGY	1 cut(s)	979
Cfr13I	GGNCC	4 cut(s)	353, 354, 359, 374
Cfr9I	CCCGGG	1 cut(s)	356
CseI	GACGC	3 cut(s)	34, 304, 925
Csp6I	GTAC	1 cut(s)	1150
CviAII	CATG	9 cut(s)	23, 71, 260, 709, 745, 770, 891, 997, 1157
CviQI	GTAC	1 cut(s)	1150
DdeI	CTNAG	4 cut(s)	242, 753, 941, 1035
DinI	GGCGCC	1 cut(s)	348
DpnI	GATC	8 cut(s)	81, 87, 160, 188, 291, 388, 534, 904
DpnII	GATC	8 cut(s)	79, 85, 158, 186, 289, 386, 532, 902
DraI	TTTAAA	1 cut(s)	730
DrdI	GACNNNNNNGTC	1 cut(s)	277
DseDI	GACNNNNNNGTC	1 cut(s)	277
EaeI	YGGCCR	1 cut(s)	40
EagI	CGGCCG	1 cut(s)	40
Eam1104I	CTCTTC	3 cut(s)	202, 506, 1140
EarI	CTCTTC	3 cut(s)	202, 506, 1140
EciI	GGCGGA	1 cut(s)	975
EclXI	CGGCCG	1 cut(s)	40
Eco130I	CCWWGG	4 cut(s)	264, 807, 890, 1074
Eco24I	GRGCYC	1 cut(s)	357
Eco52I	CGGCCG	1 cut(s)	40
Eco57I	CTGAAG	2 cut(s)	596, 1236
Eco72I	CACGTG	1 cut(s)	8
Eco88I	CYCGRG	1 cut(s)	356
EcoO109I	RGGNCCY	1 cut(s)	353
EcoRII	CCWGG	4 cut(s)	50, 200, 396, 1060
EcoT14I	CCWWGG	4 cut(s)	264, 807, 890, 1074
EcoT22I	ATGCAT	1 cut(s)	261
EcoT38I	GRGCYC	1 cut(s)	357
EgeI	GGCGCC	1 cut(s)	348
EheI	GGCGCC	1 cut(s)	348
ErhI	CCWWGG	4 cut(s)	264, 807, 890, 1074
FaeI	CATG	9 cut(s)	26, 74, 263, 712, 748, 773, 894, 1000, 1160
FalI	AAGNNNNNCTT	2 cut(s)	1188, 1220
FaqI	GGGAC	1 cut(s)	283
FatI	CATG	9 cut(s)	22, 70, 259, 708, 744, 769, 890, 996, 1156
FauI	CCCGC	1 cut(s)	163
FblI	GTMKAC	2 cut(s)	606, 687
Fnu4HI	GCNGC	5 cut(s)	43, 836, 849, 861, 958
FokI	GGATG	2 cut(s)	115, 433
FriOI	GRGCYC	1 cut(s)	357
Fsp4HI	GCNGC	5 cut(s)	43, 836, 849, 861, 958
FspBI	CTAG	7 cut(s)	176, 381, 654, 666, 798, 852, 864
GlaI	GCGC	3 cut(s)	13, 348, 839
GluI	GCNGC	5 cut(s)	43, 836, 849, 861, 958
GsuI	CTGGAG	1 cut(s)	73
HaeII	RGCGCY	2 cut(s)	350, 841
HaeIII	GGCC	4 cut(s)	42, 355, 361, 375
HapII	CCGG	4 cut(s)	150, 350, 357, 980
HgaI	GACGC	3 cut(s)	34, 304, 925
HhaI	GCGC	3 cut(s)	14, 349, 840
Hin1I	GRCGYC	2 cut(s)	347, 936
Hin1II	CATG	9 cut(s)	26, 74, 263, 712, 748, 773, 894, 1000, 1160
Hin6I	GCGC	3 cut(s)	12, 347, 838
HinP1I	GCGC	3 cut(s)	12, 347, 838
HincII	GTYRAC	1 cut(s)	688
HindII	GTYRAC	1 cut(s)	688
HindIII	AAGCTT	1 cut(s)	485
HinfI	GANTC	5 cut(s)	421, 812, 1103, 1176, 1201
HpaII	CCGG	4 cut(s)	150, 350, 357, 980
HphI	GGTGA	2 cut(s)	40, 733
Hpy166II	GTNNAC	2 cut(s)	607, 688
Hpy188I	TCNGA	4 cut(s)	186, 294, 430, 1036
Hpy188III	TCNNGA	7 cut(s)	83, 89, 287, 551, 630, 709, 770
Hpy8I	GTNNAC	2 cut(s)	607, 688
Hpy99I	CGWCG	4 cut(s)	346, 367, 481, 692
HpyAV	CCTTC	3 cut(s)	620, 757, 1126
HpyCH4III	ACNGT	3 cut(s)	100, 311, 682
HpyCH4IV	ACGT	2 cut(s)	7, 476
HpyCH4V	TGCA	3 cut(s)	259, 599, 1193
HpyF10VI	GCNNNNNNNGC	6 cut(s)	146, 493, 857, 942, 966, 1180
HpyF3I	CTNAG	4 cut(s)	242, 753, 941, 1035
HpySE526I	ACGT	2 cut(s)	7, 476
Hsp92I	GRCGYC	2 cut(s)	347, 936
Hsp92II	CATG	9 cut(s)	26, 74, 263, 712, 748, 773, 894, 1000, 1160
HspAI	GCGC	3 cut(s)	12, 347, 838
KasI	GGCGCC	1 cut(s)	346
KroI	GCCGGC	1 cut(s)	979
KroNI	GCCGGC	1 cut(s)	981
Kzo9I	GATC	8 cut(s)	79, 85, 158, 186, 289, 386, 532, 902
LmnI	GCTCC	4 cut(s)	553, 621, 962, 1051
Lsp1109I	GCAGC	3 cut(s)	835, 847, 847
LweI	GCATC	2 cut(s)	455, 917
MaeI	CTAG	7 cut(s)	176, 381, 654, 666, 798, 852, 864
MaeII	ACGT	2 cut(s)	7, 476
MaeIII	GTNAC	2 cut(s)	46, 656
MalI	GATC	8 cut(s)	81, 87, 160, 188, 291, 388, 534, 904
MboI	GATC	8 cut(s)	79, 85, 158, 186, 289, 386, 532, 902
MboII	GAAGA	8 cut(s)	189, 523, 792, 861, 903, 1126, 1129, 1157
MfeI	CAATTG	1 cut(s)	785
MflI	RGATCY	1 cut(s)	186
MhlI	GDGCHC	3 cut(s)	39, 357, 716
MluCI	AATT	9 cut(s)	143, 230, 392, 453, 503, 546, 757, 785, 1066
Mly113I	GGCGCC	1 cut(s)	347
MlyI	GAGTC	2 cut(s)	415, 1185
Mph1103I	ATGCAT	1 cut(s)	261
MreI	CGCCGGCG	1 cut(s)	979
MroNI	GCCGGC	1 cut(s)	979
MroXI	GAANNNNTTC	1 cut(s)	335
MseI	TTAA	3 cut(s)	435, 729, 1089
MspA1I	CMGCKG	1 cut(s)	860
MspI	CCGG	4 cut(s)	150, 350, 357, 980
MspR9I	CCNGG	7 cut(s)	52, 202, 351, 357, 358, 398, 1062
MunI	CAATTG	1 cut(s)	785
MvaI	CCWGG	4 cut(s)	52, 202, 398, 1062
MvnI	CGCG	1 cut(s)	45
MwoI	GCNNNNNNNGC	6 cut(s)	146, 493, 857, 942, 966, 1180
NaeI	GCCGGC	1 cut(s)	981
NarI	GGCGCC	1 cut(s)	347
NciI	CCSGG	3 cut(s)	351, 357, 358
NcoI	CCATGG	1 cut(s)	890
NdeII	GATC	8 cut(s)	79, 85, 158, 186, 289, 386, 532, 902
NgoMIV	GCCGGC	1 cut(s)	979
NlaIII	CATG	9 cut(s)	26, 74, 263, 712, 748, 773, 894, 1000, 1160
NlaIV	GGNNCC	5 cut(s)	97, 348, 354, 355, 964
NmeAIII	GCCGAG	2 cut(s)	18, 933
NmuCI	GTSAC	2 cut(s)	46, 656
NsiI	ATGCAT	1 cut(s)	261
NspI	RCATGY	4 cut(s)	26, 74, 263, 1160
PaeI	GCATGC	1 cut(s)	263
PagI	TCATGA	2 cut(s)	708, 769
PciI	ACATGT	1 cut(s)	70
PcsI	WCGNNNNNNNCGW	1 cut(s)	416
PdiI	GCCGGC	1 cut(s)	981
PdmI	GAANNNNTTC	1 cut(s)	335
PfeI	GAWTC	3 cut(s)	812, 1103, 1201
PfoI	TCCNGGA	1 cut(s)	396
PkrI	GCNGC	5 cut(s)	44, 837, 850, 862, 959
PleI	GAGTC	2 cut(s)	415, 1184
PluTI	GGCGCC	1 cut(s)	350
PmaCI	CACGTG	1 cut(s)	8
PmlI	CACGTG	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	415, 1184
Ppu21I	YACGTR	1 cut(s)	8
PscI	ACATGT	1 cut(s)	70
Psp6I	CCWGG	4 cut(s)	50, 200, 396, 1060
PspCI	CACGTG	1 cut(s)	8
PspGI	CCWGG	4 cut(s)	50, 200, 396, 1060
PspN4I	GGNNCC	5 cut(s)	97, 348, 354, 355, 964
PspOMI	GGGCCC	1 cut(s)	353
PspPI	GGNCC	4 cut(s)	353, 354, 359, 374
PstI	CTGCAG	1 cut(s)	601
PstNI	CAGNNNCTG	1 cut(s)	556
PsuI	RGATCY	1 cut(s)	186
PvuII	CAGCTG	1 cut(s)	860
RsaI	GTAC	1 cut(s)	1151
RsaNI	GTAC	1 cut(s)	1150
SalI	GTCGAC	1 cut(s)	686
SaqAI	TTAA	3 cut(s)	435, 729, 1089
SatI	GCNGC	5 cut(s)	43, 836, 849, 861, 958
Sau3AI	GATC	8 cut(s)	79, 85, 158, 186, 289, 386, 532, 902
Sau96I	GGNCC	4 cut(s)	353, 354, 359, 374
SchI	GAGTC	2 cut(s)	415, 1185
ScrFI	CCNGG	7 cut(s)	52, 202, 351, 357, 358, 398, 1062
SduI	GDGCHC	3 cut(s)	39, 357, 716
SfaNI	GCATC	2 cut(s)	455, 917
SfcI	CTRYAG	1 cut(s)	597
SfoI	GGCGCC	1 cut(s)	348
SgrAI	CRCCGGYG	1 cut(s)	979
SmaI	CCCGGG	1 cut(s)	358
SmlI	CTYRAG	1 cut(s)	1169
SmoI	CTYRAG	1 cut(s)	1169
SpeI	ACTAGT	2 cut(s)	380, 665
SphI	GCATGC	1 cut(s)	263
SrfI	GCCCGGGC	1 cut(s)	358
Sse9I	AATT	9 cut(s)	143, 230, 392, 453, 503, 546, 757, 785, 1066
SsiI	CCGC	6 cut(s)	43, 170, 585, 957, 960, 991
SspDI	GGCGCC	1 cut(s)	346
SspI	AATATT	1 cut(s)	649
SspMI	CTAG	7 cut(s)	176, 381, 654, 666, 798, 852, 864
StyD4I	CCNGG	7 cut(s)	50, 200, 349, 355, 356, 396, 1060
StyI	CCWWGG	4 cut(s)	264, 807, 890, 1074
TaaI	ACNGT	3 cut(s)	100, 311, 682
TaiI	ACGT	2 cut(s)	10, 479
TaqI	TCGA	3 cut(s)	28, 389, 687
TasI	AATT	9 cut(s)	143, 230, 392, 453, 503, 546, 757, 785, 1066
TatI	WGTACW	1 cut(s)	1149
TauI	GCSGC	2 cut(s)	45, 960
TfiI	GAWTC	3 cut(s)	812, 1103, 1201
Tru1I	TTAA	3 cut(s)	435, 729, 1089
Tru9I	TTAA	3 cut(s)	435, 729, 1089
TscAI	CASTG	3 cut(s)	316, 606, 849
TseFI	GTSAC	2 cut(s)	46, 656
TseI	GCWGC	3 cut(s)	835, 848, 860
Tsp45I	GTSAC	2 cut(s)	46, 656
TspDTI	ATGAA	4 cut(s)	651, 758, 985, 1145
TspMI	CCCGGG	1 cut(s)	356
TspRI	CASTG	3 cut(s)	316, 606, 849
XapI	RAATTY	3 cut(s)	392, 546, 757
XceI	RCATGY	4 cut(s)	26, 74, 263, 1160
XcmI	CCANNNNNNNNNTGG	1 cut(s)	457
XmaI	CCCGGG	1 cut(s)	356
XmiI	GTMKAC	2 cut(s)	606, 687
XmnI	GAANNNNTTC	1 cut(s)	335
XspI	CTAG	7 cut(s)	176, 381, 654, 666, 798, 852, 864
Zsp2I	ATGCAT	1 cut(s)	261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.