Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54210 AT1G54210 AT3G13970 AT3G13970 AT3G13970 AT3G13970 |
| fragaria_vesca | FvH4_6g34660 FvH4_6g34660 FvH4_6g34660 |
| malus_domestica | MD09G1183900.v1.1 |
| prunus_persica | Prupe.3G042200_v2.0.a1 Prupe.3G042200_v2.0.a1 |
| pyrus_communis | pycom09g10140 |
| rosa_chinensis | RchiOBHm_Chr2g0145211 RchiOBHm_Chr3g0490611 RchiOBHm_Chr5g0053491 |
| rosa_multiflora | Rmu_sc0001298.1_g000012 Rmu_sc0005966.1_g000021 |
| rosa_roxburghii | Rroxscaffold_1G00040040 Rroxscaffold_1G00040070 Rroxscaffold_1G00040780 Rroxscaffold_2G00100790 Rroxscaffold_6G00393370 |
| rosa_rugosa | Rorug02G0391300 Rorug02G0391400 Rorug03G0244700 Rorug05G0280300 |
| rosa_samantha | Rh2AG444100 Rh2BG455000 Rh2CG431000 Rh5BG363800 |
| rosa_wichuraiana | Rw2G036290 Rw5G033250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 484 |
| Acc36I | ACCTGC | 1 cut(s) | 484 |
| AccB1I | GGYRCC | 1 cut(s) | 472 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 154 |
| AciI | CCGC | 1 cut(s) | 173 |
| AclWI | GGATC | 1 cut(s) | 305 |
| AcsI | RAATTY | 4 cut(s) | 89, 113, 214, 267 |
| AfaI | GTAC | 1 cut(s) | 385 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 154, 576 |
| AgsI | TTSAA | 5 cut(s) | 79, 94, 364, 394, 642 |
| AhlI | ACTAGT | 1 cut(s) | 59 |
| AluBI | AGCT | 3 cut(s) | 56, 297, 699 |
| AluI | AGCT | 3 cut(s) | 56, 297, 699 |
| AlwI | GGATC | 1 cut(s) | 305 |
| ApeKI | GCWGC | 2 cut(s) | 590, 599 |
| ApoI | RAATTY | 4 cut(s) | 89, 113, 214, 267 |
| AsuHPI | GGTGA | 1 cut(s) | 631 |
| AsuII | TTCGAA | 1 cut(s) | 409 |
| BanI | GGYRCC | 1 cut(s) | 472 |
| BbvI | GCAGC | 2 cut(s) | 602, 611 |
| BccI | CCATC | 1 cut(s) | 570 |
| BcuI | ACTAGT | 1 cut(s) | 59 |
| BfaI | CTAG | 3 cut(s) | 60, 387, 528 |
| BfuAI | ACCTGC | 1 cut(s) | 484 |
| BisI | GCNGC | 2 cut(s) | 591, 600 |
| BlsI | GCNGC | 2 cut(s) | 592, 601 |
| BmcAI | AGTACT | 1 cut(s) | 385 |
| BmiI | GGNNCC | 1 cut(s) | 474 |
| BmsI | GCATC | 2 cut(s) | 55, 695 |
| Bpu14I | TTCGAA | 1 cut(s) | 409 |
| BsaJI | CCNNGG | 1 cut(s) | 148 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 31 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 154, 576 |
| Bse1I | ACTGG | 1 cut(s) | 442 |
| BseDI | CCNNGG | 1 cut(s) | 148 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 154, 576 |
| BseMII | CTCAG | 1 cut(s) | 644 |
| BseNI | ACTGG | 1 cut(s) | 442 |
| BseXI | GCAGC | 2 cut(s) | 602, 611 |
| BshNI | GGYRCC | 1 cut(s) | 472 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 154, 576 |
| Bsp119I | TTCGAA | 1 cut(s) | 409 |
| Bsp143I | GATC | 1 cut(s) | 310 |
| Bsp19I | CCATGG | 1 cut(s) | 148 |
| BspACI | CCGC | 1 cut(s) | 173 |
| BspCNI | CTCAG | 1 cut(s) | 643 |
| BspLI | GGNNCC | 1 cut(s) | 474 |
| BspMI | ACCTGC | 1 cut(s) | 484 |
| BspPI | GGATC | 1 cut(s) | 305 |
| BspT104I | TTCGAA | 1 cut(s) | 409 |
| BspT107I | GGYRCC | 1 cut(s) | 472 |
| BsrI | ACTGG | 1 cut(s) | 442 |
| BssECI | CCNNGG | 1 cut(s) | 148 |
| BssMI | GATC | 1 cut(s) | 310 |
| BssT1I | CCWWGG | 1 cut(s) | 148 |
| Bst4CI | ACNGT | 2 cut(s) | 131, 536 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 605 |
| BstBI | TTCGAA | 1 cut(s) | 409 |
| BstC8I | GCNNGC | 2 cut(s) | 84, 588 |
| BstDEI | CTNAG | 3 cut(s) | 30, 50, 630 |
| BstDSI | CCRYGG | 1 cut(s) | 148 |
| BstKTI | GATC | 1 cut(s) | 313 |
| BstMBI | GATC | 1 cut(s) | 310 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 179, 596, 599, 605 |
| BstV1I | GCAGC | 2 cut(s) | 602, 611 |
| BstX2I | RGATCY | 1 cut(s) | 310 |
| BstYI | RGATCY | 1 cut(s) | 310 |
| BtgI | CCRYGG | 1 cut(s) | 148 |
| BtgZI | GCGATG | 1 cut(s) | 589 |
| BtsIMutI | CAGTG | 1 cut(s) | 175 |
| BveI | ACCTGC | 1 cut(s) | 484 |
| Cac8I | GCNNGC | 2 cut(s) | 84, 588 |
| Csp6I | GTAC | 1 cut(s) | 384 |
| CviAII | CATG | 4 cut(s) | 149, 154, 242, 304 |
| CviJI | RGCY | 4 cut(s) | 56, 160, 297, 699 |
| CviKI_1 | RGCY | 4 cut(s) | 56, 160, 297, 699 |
| CviQI | GTAC | 1 cut(s) | 384 |
| DdeI | CTNAG | 3 cut(s) | 30, 50, 630 |
| DpnI | GATC | 1 cut(s) | 312 |
| DpnII | GATC | 1 cut(s) | 310 |
| Eco130I | CCWWGG | 1 cut(s) | 148 |
| EcoT14I | CCWWGG | 1 cut(s) | 148 |
| ErhI | CCWWGG | 1 cut(s) | 148 |
| FaeI | CATG | 4 cut(s) | 152, 157, 245, 307 |
| FatI | CATG | 4 cut(s) | 148, 153, 241, 303 |
| FauI | CCCGC | 1 cut(s) | 166 |
| Fnu4HI | GCNGC | 2 cut(s) | 591, 600 |
| Fsp4HI | GCNGC | 2 cut(s) | 591, 600 |
| FspBI | CTAG | 3 cut(s) | 60, 387, 528 |
| GluI | GCNGC | 2 cut(s) | 591, 600 |
| Hin1II | CATG | 4 cut(s) | 152, 157, 245, 307 |
| HinfI | GANTC | 4 cut(s) | 14, 275, 441, 483 |
| HphI | GGTGA | 1 cut(s) | 631 |
| Hpy188I | TCNGA | 3 cut(s) | 21, 633, 691 |
| Hpy188III | TCNNGA | 1 cut(s) | 94 |
| HpyCH4III | ACNGT | 2 cut(s) | 131, 536 |
| HpyCH4IV | ACGT | 1 cut(s) | 234 |
| HpyCH4V | TGCA | 3 cut(s) | 479, 608, 665 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 179, 596, 599, 605 |
| HpyF3I | CTNAG | 3 cut(s) | 30, 50, 630 |
| HpySE526I | ACGT | 1 cut(s) | 234 |
| Hsp92II | CATG | 4 cut(s) | 152, 157, 245, 307 |
| Kzo9I | GATC | 1 cut(s) | 310 |
| LpnPI | CCDG | 6 cut(s) | 84, 423, 434, 489, 600, 663 |
| Lsp1109I | GCAGC | 2 cut(s) | 602, 611 |
| LweI | GCATC | 2 cut(s) | 55, 695 |
| MaeI | CTAG | 3 cut(s) | 60, 387, 528 |
| MaeII | ACGT | 1 cut(s) | 234 |
| MaeIII | GTNAC | 2 cut(s) | 103, 679 |
| MalI | GATC | 1 cut(s) | 312 |
| MboI | GATC | 1 cut(s) | 310 |
| MboII | GAAGA | 1 cut(s) | 275 |
| MflI | RGATCY | 1 cut(s) | 310 |
| MluCI | AATT | 5 cut(s) | 89, 113, 134, 214, 267 |
| MlyI | GAGTC | 1 cut(s) | 269 |
| MmeI | TCCRAC | 1 cut(s) | 44 |
| MnlI | CCTC | 3 cut(s) | 198, 577, 637 |
| MslI | CAYNNNNRTG | 1 cut(s) | 674 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 179, 596, 599, 605 |
| NcoI | CCATGG | 1 cut(s) | 148 |
| NdeII | GATC | 1 cut(s) | 310 |
| NlaIII | CATG | 4 cut(s) | 152, 157, 245, 307 |
| NlaIV | GGNNCC | 1 cut(s) | 474 |
| NmuCI | GTSAC | 1 cut(s) | 679 |
| NspV | TTCGAA | 1 cut(s) | 409 |
| PaqCI | CACCTGC | 1 cut(s) | 484 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 17 |
| PfeI | GAWTC | 3 cut(s) | 14, 441, 483 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 154 |
| PkrI | GCNGC | 2 cut(s) | 592, 601 |
| PleI | GAGTC | 1 cut(s) | 269 |
| PpsI | GAGTC | 1 cut(s) | 269 |
| PspN4I | GGNNCC | 1 cut(s) | 474 |
| PsuI | RGATCY | 1 cut(s) | 310 |
| RsaI | GTAC | 1 cut(s) | 385 |
| RsaNI | GTAC | 1 cut(s) | 384 |
| RseI | CAYNNNNRTG | 1 cut(s) | 674 |
| SatI | GCNGC | 2 cut(s) | 591, 600 |
| Sau3AI | GATC | 1 cut(s) | 310 |
| ScaI | AGTACT | 1 cut(s) | 385 |
| SchI | GAGTC | 1 cut(s) | 269 |
| SetI | ASST | 9 cut(s) | 58, 209, 237, 299, 392, 478, 569, 629, 701 |
| SfaNI | GCATC | 2 cut(s) | 55, 695 |
| SfuI | TTCGAA | 1 cut(s) | 409 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 674 |
| SpeI | ACTAGT | 1 cut(s) | 59 |
| Sse9I | AATT | 5 cut(s) | 89, 113, 134, 214, 267 |
| SsiI | CCGC | 1 cut(s) | 173 |
| SspI | AATATT | 1 cut(s) | 562 |
| SspMI | CTAG | 3 cut(s) | 60, 387, 528 |
| StyI | CCWWGG | 1 cut(s) | 148 |
| TaaI | ACNGT | 2 cut(s) | 131, 536 |
| TaiI | ACGT | 1 cut(s) | 237 |
| TaqI | TCGA | 1 cut(s) | 409 |
| TasI | AATT | 5 cut(s) | 89, 113, 134, 214, 267 |
| TatI | WGTACW | 1 cut(s) | 383 |
| TfiI | GAWTC | 3 cut(s) | 14, 441, 483 |
| TscAI | CASTG | 1 cut(s) | 175 |
| TseFI | GTSAC | 1 cut(s) | 679 |
| TseI | GCWGC | 2 cut(s) | 590, 599 |
| Tsp45I | GTSAC | 1 cut(s) | 679 |
| TspDTI | ATGAA | 3 cut(s) | 35, 276, 490 |
| TspGWI | ACGGA | 1 cut(s) | 26 |
| TspRI | CASTG | 1 cut(s) | 175 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 154 |
| XapI | RAATTY | 4 cut(s) | 89, 113, 214, 267 |
| XspI | CTAG | 3 cut(s) | 60, 387, 528 |
| ZrmI | AGTACT | 1 cut(s) | 385 |