No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G34530 AT2G34530 AT2G34530 AT2G34530 AT2G34530 |
| fragaria_vesca | FvH4_3g05560 |
| malus_domestica | MD05G1283900.v1.1 MD10G1262200.v1.1 |
| prunus_persica | Prupe.4G080500_v2.0.a1 |
| pyrus_communis | pycom05g26300 pycom10g21840 |
| rosa_chinensis | RchiOBHm_Chr5g0014111 RchiOBHm_Chr5g0014141 |
| rosa_laevigata | RLG00000032082 RLG00000032085 |
| rosa_multiflora | Rmu_sc0007767.1_g000017 Rmu_sc0007767.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00062460 Rroxscaffold_1G00062480 Rroxscaffold_1G00062500 Rroxscaffold_1G00062520 |
| rosa_rugosa | Rorug05G0015700 Rorug05G0016000 |
| rosa_samantha | Rh5AG109700 Rh5AG109800 Rh5BG106700 Rh5CG118400 Rh5CG118900 Rh5DG105200 Rh5DG105400 |
| rosa_wichuraiana | Rw5G009580 Rw5G009590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 154 |
| AclWI | GGATC | 1 cut(s) | 105 |
| AcuI | CTGAAG | 1 cut(s) | 90 |
| AgsI | TTSAA | 2 cut(s) | 49, 118 |
| AluBI | AGCT | 3 cut(s) | 74, 104, 160 |
| AluI | AGCT | 3 cut(s) | 74, 104, 160 |
| AlwI | GGATC | 1 cut(s) | 105 |
| Ama87I | CYCGRG | 1 cut(s) | 75 |
| ApeKI | GCWGC | 2 cut(s) | 58, 160 |
| AsuHPI | GGTGA | 1 cut(s) | 116 |
| AvaI | CYCGRG | 1 cut(s) | 75 |
| BbvI | GCAGC | 2 cut(s) | 45, 147 |
| BfmI | CTRYAG | 1 cut(s) | 161 |
| BfuAI | ACCTGC | 1 cut(s) | 154 |
| BisI | GCNGC | 2 cut(s) | 59, 161 |
| BlsI | GCNGC | 2 cut(s) | 60, 162 |
| BmeT110I | CYCGRG | 1 cut(s) | 75 |
| BmsI | GCATC | 2 cut(s) | 46, 181 |
| Bsa29I | ATCGAT | 1 cut(s) | 246 |
| BsaJI | CCNNGG | 2 cut(s) | 15, 28 |
| Bse3DI | GCAATG | 1 cut(s) | 99 |
| BseCI | ATCGAT | 1 cut(s) | 246 |
| BseDI | CCNNGG | 2 cut(s) | 15, 28 |
| BseMI | GCAATG | 1 cut(s) | 99 |
| BseXI | GCAGC | 2 cut(s) | 45, 147 |
| BshVI | ATCGAT | 1 cut(s) | 246 |
| BsiHKCI | CYCGRG | 1 cut(s) | 75 |
| BsmI | GAATGC | 1 cut(s) | 239 |
| BsoBI | CYCGRG | 1 cut(s) | 75 |
| Bsp143I | GATC | 1 cut(s) | 97 |
| Bsp19I | CCATGG | 2 cut(s) | 15, 28 |
| BspDI | ATCGAT | 1 cut(s) | 246 |
| BspMAI | CTGCAG | 1 cut(s) | 165 |
| BspMI | ACCTGC | 1 cut(s) | 154 |
| BspPI | GGATC | 1 cut(s) | 105 |
| BsrDI | GCAATG | 1 cut(s) | 99 |
| BssECI | CCNNGG | 2 cut(s) | 15, 28 |
| BssMI | GATC | 1 cut(s) | 97 |
| BssT1I | CCWWGG | 2 cut(s) | 15, 28 |
| Bst6I | CTCTTC | 1 cut(s) | 44 |
| BstDSI | CCRYGG | 2 cut(s) | 15, 28 |
| BstKTI | GATC | 1 cut(s) | 100 |
| BstMBI | GATC | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 169 |
| BstNSI | RCATGY | 1 cut(s) | 205 |
| BstSFI | CTRYAG | 1 cut(s) | 161 |
| BstV1I | GCAGC | 2 cut(s) | 45, 147 |
| Bsu15I | ATCGAT | 1 cut(s) | 246 |
| BsuTUI | ATCGAT | 1 cut(s) | 246 |
| BtgI | CCRYGG | 2 cut(s) | 15, 28 |
| BveI | ACCTGC | 1 cut(s) | 154 |
| ClaI | ATCGAT | 1 cut(s) | 246 |
| CviAII | CATG | 3 cut(s) | 16, 29, 202 |
| CviJI | RGCY | 5 cut(s) | 20, 74, 104, 122, 160 |
| CviKI_1 | RGCY | 5 cut(s) | 20, 74, 104, 122, 160 |
| DpnI | GATC | 1 cut(s) | 99 |
| DpnII | GATC | 1 cut(s) | 97 |
| Eam1104I | CTCTTC | 1 cut(s) | 44 |
| EarI | CTCTTC | 1 cut(s) | 44 |
| Eco130I | CCWWGG | 2 cut(s) | 15, 28 |
| Eco57I | CTGAAG | 1 cut(s) | 90 |
| Eco88I | CYCGRG | 1 cut(s) | 75 |
| EcoT14I | CCWWGG | 2 cut(s) | 15, 28 |
| ErhI | CCWWGG | 2 cut(s) | 15, 28 |
| FaeI | CATG | 3 cut(s) | 19, 32, 205 |
| FaiI | YATR | 6 cut(s) | 11, 17, 30, 186, 195, 203 |
| FatI | CATG | 3 cut(s) | 15, 28, 201 |
| Fnu4HI | GCNGC | 2 cut(s) | 59, 161 |
| Fsp4HI | GCNGC | 2 cut(s) | 59, 161 |
| GluI | GCNGC | 2 cut(s) | 59, 161 |
| Hin1II | CATG | 3 cut(s) | 19, 32, 205 |
| HincII | GTYRAC | 1 cut(s) | 229 |
| HindII | GTYRAC | 1 cut(s) | 229 |
| HinfI | GANTC | 1 cut(s) | 248 |
| HphI | GGTGA | 1 cut(s) | 116 |
| Hpy166II | GTNNAC | 1 cut(s) | 229 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| Hpy188III | TCNNGA | 1 cut(s) | 68 |
| Hpy8I | GTNNAC | 1 cut(s) | 229 |
| HpyAV | CCTTC | 1 cut(s) | 112 |
| HpyCH4IV | ACGT | 1 cut(s) | 231 |
| HpyCH4V | TGCA | 3 cut(s) | 61, 92, 163 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 169 |
| HpySE526I | ACGT | 1 cut(s) | 231 |
| Hsp92II | CATG | 3 cut(s) | 19, 32, 205 |
| Kzo9I | GATC | 1 cut(s) | 97 |
| LpnPI | CCDG | 5 cut(s) | 26, 81, 149, 154, 159 |
| Lsp1109I | GCAGC | 2 cut(s) | 45, 147 |
| LweI | GCATC | 2 cut(s) | 46, 181 |
| MaeII | ACGT | 1 cut(s) | 231 |
| MaeIII | GTNAC | 1 cut(s) | 110 |
| MalI | GATC | 1 cut(s) | 99 |
| MboI | GATC | 1 cut(s) | 97 |
| MboII | GAAGA | 1 cut(s) | 61 |
| MluCI | AATT | 1 cut(s) | 254 |
| MnlI | CCTC | 2 cut(s) | 26, 35 |
| MseI | TTAA | 1 cut(s) | 132 |
| Mva1269I | GAATGC | 1 cut(s) | 239 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 169 |
| NcoI | CCATGG | 2 cut(s) | 15, 28 |
| NdeII | GATC | 1 cut(s) | 97 |
| NlaIII | CATG | 3 cut(s) | 19, 32, 205 |
| NmuCI | GTSAC | 1 cut(s) | 110 |
| NspI | RCATGY | 1 cut(s) | 205 |
| PaeR7I | CTCGAG | 1 cut(s) | 75 |
| PctI | GAATGC | 1 cut(s) | 239 |
| PfeI | GAWTC | 1 cut(s) | 248 |
| PkrI | GCNGC | 2 cut(s) | 60, 162 |
| PspXI | VCTCGAGB | 1 cut(s) | 75 |
| PstI | CTGCAG | 1 cut(s) | 165 |
| SaqAI | TTAA | 1 cut(s) | 132 |
| SatI | GCNGC | 2 cut(s) | 59, 161 |
| Sau3AI | GATC | 1 cut(s) | 97 |
| SetI | ASST | 7 cut(s) | 8, 76, 106, 129, 162, 168, 234 |
| SfaNI | GCATC | 2 cut(s) | 46, 181 |
| SfcI | CTRYAG | 1 cut(s) | 161 |
| Sfr274I | CTCGAG | 1 cut(s) | 75 |
| SlaI | CTCGAG | 1 cut(s) | 75 |
| SmlI | CTYRAG | 1 cut(s) | 75 |
| SmoI | CTYRAG | 1 cut(s) | 75 |
| Sse9I | AATT | 1 cut(s) | 254 |
| StyI | CCWWGG | 2 cut(s) | 15, 28 |
| TaiI | ACGT | 1 cut(s) | 234 |
| TaqI | TCGA | 2 cut(s) | 76, 246 |
| TasI | AATT | 1 cut(s) | 254 |
| TfiI | GAWTC | 1 cut(s) | 248 |
| Tru1I | TTAA | 1 cut(s) | 132 |
| Tru9I | TTAA | 1 cut(s) | 132 |
| TseFI | GTSAC | 1 cut(s) | 110 |
| TseI | GCWGC | 2 cut(s) | 58, 160 |
| Tsp45I | GTSAC | 1 cut(s) | 110 |
| TspDTI | ATGAA | 1 cut(s) | 232 |
| XceI | RCATGY | 1 cut(s) | 205 |
| XhoI | CTCGAG | 1 cut(s) | 75 |