Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0006673

Physical Location & Seq

Genomic Coordinates Forward (+)

88058769 .. 88061784

Gene Structure 3016 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00066520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

ATGTTAGATTGGCCTAGAAGATCCAGAGCCAGAAACAAAGCTAGTTGCAGCAAAAGGGTTTTAGTTTTGAGTTCTGCTCCATCATCATCAATCATGGCTTCATCAAACAGACACTGGCCTAGCATGTTCAAATCCAAACCCACCCACCACCAATGGCAGCATGACGTCATCAATCCCTCTGTCGTGTCAAACGGTTCATGCCACAGGCCCCCATACACAACCACAACGGCTACAACATCATCAGGGATCGAAGATCAAAGGACTCCGGAGCCAAAGCCACGGTGGAACCCTCGGCCGGAGCAGATTCGAATTCTGGAAGCTATTTTCAACTCCGGGATGGTGAATCCTCCGAGGGACGAGATAAGGAAGATCAGAGCTCAGCTCCAAGAGTACGGTCAAGTCGGTGACGCCAATGTCTTCTACTGGTTCCAGAACAGAAAATCAAGGTCCAAACACAAGCTTCGCCTGCAGCACATTAACTCAAAGCAACAGCAACAATCCCATAAACCATCACTGACTGCTGCCCCTTCATCTTCTTCTTCATCTTCGGAAAGATCCTCTCCCAACAAACAGCAGCAGCAGTCAAACAAGGCCTTCTCTATGGGGTTCTCCTCACCACCACATGTTGTTACTACTCATGATGTTTCCAACATTAACTCACCGACCGCTTCGGTCAATCAGACATCCTTTTTCCATGCTCTTCCCAACCCTGAGGTCTTGCCTGAATCAGCCTACTTCTTTCCAATGAACAACCCTTCTTCTACCAACGGGCCTGTAGCTAGTGCTAGTTTTAGTACTACGCAAGGGTTTTGCTTTTCCGAGCTCGAGAATGTGGTTCATGTGAATAATAGTCCCGATCTTCATGGGCCTTGTACTAGTCTTTTGCTTAGTGAGATTATGAACAACAATGGGATGGCCTCAAGGAAGATTGGTCAAGATCAAGAGATGAAGGGCATCAAGATGGACCAACTGCAACAACAGCTCAATTACAATGGCGCTGTCACCACTTCTCCAACAACTACTGGTGCCGTTAACGTTGCTGTTCCATCACCCATGACTCACATTCAAGGTGTTGGTGAAGCTGGTGGTGCAATAATGGGAGCGGGAGGTGCGGCGAAATCCATGGTGTTCATAAACGACGTCGCATTCGAGGTGGCTGCGGGACCCTTCAACGTGCGTGAGGCTTTCGGAGACGACGCCGTCCTCATTCACTCTTCTGGTCACCCTGTTCTCACCAATGAGTGGGGAGTTACCCTTCACTCTCTTCACCACGGCGCATTTTATTACCTCATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007163 GO:0007275 GO:0008150 GO:0008284 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010075 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030010 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040008 GO:0042127 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048522 GO:0048608 GO:0048638 GO:0048646 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048859 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090451 GO:0090691 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04550 map04550

Pfam Domains

Protein Families

Homeobox

Protein Analysis

431

Amino Acids

47.18

Weight (kDa)

9.33

Isoelectric Point (pI)

60.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	92 - 151	1.7e-11	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006673)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33880 AT2G33880
fragaria_vesca	FvH4_3g08310 FvH4_3g08310 FvH4_3g08310 FvH4_3g10130 FvH4_3g10130 FvH4_3g10130 FvH4_3g10130 FvH4_3g10130
malus_domestica	MD05G1307400.v1.1 MD10G1286500.v1.1
prunus_persica	Prupe.4G055300_v2.0.a1
pyrus_communis	pycom05g28410
rosa_chinensis	RchiOBHm_Chr5g0009691
rosa_laevigata	RLG00000031680
rosa_multiflora	Rmu_co8361113.1_g000001 Rmu_sc0019694.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066520
rosa_rugosa	Rorug04G0444800 Rorug04G0444900
rosa_samantha	Rh5AG076400 Rh5BG071600 Rh5CG084200 Rh5DG072200
rosa_wichuraiana	Rw5G007040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	413, 1199
AatII	GACGTC	2 cut(s)	168, 1143
AccB1I	GGYRCC	1 cut(s)	1025
AccB7I	CCANNNNNTGG	1 cut(s)	1242
AccBSI	CCGCTC	1 cut(s)	1103
AccIII	TCCGGA	1 cut(s)	265
AciI	CCGC	4 cut(s)	666, 1103, 1112, 1160
AclI	AACGTT	1 cut(s)	1035
AclWI	GGATC	3 cut(s)	15, 254, 549
AcoI	YGGCCR	1 cut(s)	293
AcsI	RAATTY	1 cut(s)	309
AcyI	GRCGYC	4 cut(s)	165, 408, 1140, 1197
AfaI	GTAC	3 cut(s)	392, 796, 874
AfiI	CCNNNNNNNGG	2 cut(s)	295, 1242
AflIII	ACRYGT	1 cut(s)	622
AgsI	TTSAA	4 cut(s)	130, 328, 1067, 1171
AhlI	ACTAGT	1 cut(s)	875
AluBI	AGCT	9 cut(s)	41, 320, 377, 382, 460, 779, 823, 982, 1082
AluI	AGCT	9 cut(s)	41, 320, 377, 382, 460, 779, 823, 982, 1082
Alw21I	GWGCWC	2 cut(s)	379, 825
Alw26I	GTCTC	1 cut(s)	1185
AlwI	GGATC	3 cut(s)	15, 254, 549
AlwNI	CAGNNNCTG	1 cut(s)	114
Ama87I	CYCGRG	1 cut(s)	824
Aor13HI	TCCGGA	1 cut(s)	265
AoxI	GGCC	8 cut(s)	11, 116, 206, 293, 591, 770, 866, 915
ApeKI	GCWGC	7 cut(s)	48, 157, 469, 521, 574, 577, 1157
ApoI	RAATTY	1 cut(s)	309
ArsI	GACNNNNNNTTYG	2 cut(s)	1130, 1162
AspLEI	GCGC	2 cut(s)	998, 1277
AspS9I	GGNCC	6 cut(s)	207, 447, 770, 866, 964, 1163
AsuC2I	CCSGG	1 cut(s)	334
AsuII	TTCGAA	1 cut(s)	307
AvaI	CYCGRG	1 cut(s)	824
AvaII	GGWCC	3 cut(s)	447, 964, 1163
AxyI	CCTNAGG	1 cut(s)	711
BanI	GGYRCC	1 cut(s)	1025
BanII	GRGCYC	2 cut(s)	379, 825
BbsI	GAAGAC	1 cut(s)	409
Bbv12I	GWGCWC	2 cut(s)	379, 825
BbvI	GCAGC	7 cut(s)	60, 169, 481, 508, 586, 589, 1144
BccI	CCATC	6 cut(s)	88, 331, 517, 907, 955, 1054
BceAI	ACGGC	4 cut(s)	243, 1013, 1184, 1288
BcgI	CGANNNNNNTGC	2 cut(s)	1139, 1173
BcnI	CCSGG	1 cut(s)	334
BcoDI	GTCTC	1 cut(s)	1185
BcuI	ACTAGT	1 cut(s)	875
BfaI	CTAG	6 cut(s)	15, 42, 120, 780, 786, 876
BfmI	CTRYAG	2 cut(s)	467, 774
BfoI	RGCGCY	1 cut(s)	999
BisI	GCNGC	8 cut(s)	49, 158, 470, 522, 575, 578, 1113, 1158
BlpI	GCTNAGC	1 cut(s)	378
BlsI	GCNGC	8 cut(s)	50, 159, 471, 523, 576, 579, 1114, 1159
BmcAI	AGTACT	1 cut(s)	796
Bme1390I	CCNGG	1 cut(s)	334
Bme18I	GGWCC	3 cut(s)	447, 964, 1163
BmeT110I	CYCGRG	1 cut(s)	824
BmgT120I	GGNCC	6 cut(s)	207, 447, 770, 866, 964, 1163
BmiI	GGNNCC	7 cut(s)	209, 270, 287, 428, 1027, 1164, 1165
BmrFI	CCNGG	1 cut(s)	334
BmsI	GCATC	1 cut(s)	963
BpiI	GAAGAC	1 cut(s)	409
BplI	GAGNNNNNCTC	4 cut(s)	61, 93, 366, 398
Bpu1102I	GCTNAGC	1 cut(s)	378
Bpu14I	TTCGAA	1 cut(s)	307
BpuEI	CTTGAG	1 cut(s)	904
BpuMI	CCSGG	1 cut(s)	334
BsaHI	GRCGYC	4 cut(s)	165, 408, 1140, 1197
BsaJI	CCNNGG	5 cut(s)	278, 290, 350, 1122, 1270
BsaWI	WCCGGW	1 cut(s)	265
BsaXI	ACNNNNNCTCC	2 cut(s)	994, 1024
Bsc4I	CCNNNNNNNGG	2 cut(s)	295, 1242
Bse1I	ACTGG	3 cut(s)	119, 428, 1027
Bse21I	CCTNAGG	1 cut(s)	711
BseAI	TCCGGA	1 cut(s)	265
BseDI	CCNNGG	5 cut(s)	278, 290, 350, 1122, 1270
BseGI	GGATG	3 cut(s)	342, 683, 918
BseLI	CCNNNNNNNGG	2 cut(s)	295, 1242
BseMII	CTCAG	2 cut(s)	392, 702
BseNI	ACTGG	3 cut(s)	119, 428, 1027
BseRI	GAGGAG	1 cut(s)	601
BseX3I	CGGCCG	1 cut(s)	293
BseXI	GCAGC	7 cut(s)	60, 169, 481, 508, 586, 589, 1144
Bsh1285I	CGRYCG	2 cut(s)	296, 666
BshFI	GGCC	8 cut(s)	13, 118, 208, 295, 593, 772, 868, 917
BshNI	GGYRCC	1 cut(s)	1025
BsiEI	CGRYCG	2 cut(s)	296, 666
BsiHKAI	GWGCWC	2 cut(s)	379, 825
BsiHKCI	CYCGRG	1 cut(s)	824
BsiSI	CCGG	3 cut(s)	266, 296, 333
BslFI	GGGAC	3 cut(s)	368, 837, 1176
BslI	CCNNNNNNNGG	2 cut(s)	295, 1242
BsmAI	GTCTC	1 cut(s)	1185
BsmBI	CGTCTC	1 cut(s)	1185
BsmFI	GGGAC	3 cut(s)	368, 837, 1176
BsmI	GAATGC	1 cut(s)	1145
BsnI	GGCC	8 cut(s)	13, 118, 208, 295, 593, 772, 868, 917
BsoBI	CYCGRG	1 cut(s)	824
Bsp119I	TTCGAA	1 cut(s)	307
Bsp1286I	GDGCHC	2 cut(s)	379, 825
Bsp13I	TCCGGA	1 cut(s)	265
Bsp143I	GATC	7 cut(s)	20, 246, 253, 369, 554, 856, 937
Bsp1720I	GCTNAGC	1 cut(s)	378
Bsp19I	CCATGG	1 cut(s)	1122
BspACI	CCGC	4 cut(s)	666, 1103, 1112, 1160
BspANI	GGCC	8 cut(s)	13, 118, 208, 295, 593, 772, 868, 917
BspCNI	CTCAG	2 cut(s)	391, 703
BspEI	TCCGGA	1 cut(s)	265
BspHI	TCATGA	1 cut(s)	637
BspLI	GGNNCC	7 cut(s)	209, 270, 287, 428, 1027, 1164, 1165
BspMAI	CTGCAG	1 cut(s)	471
BspPI	GGATC	3 cut(s)	15, 254, 549
BspQI	GCTCTTC	1 cut(s)	705
BspT104I	TTCGAA	1 cut(s)	307
BspT107I	GGYRCC	1 cut(s)	1025
BsrBI	CCGCTC	1 cut(s)	1103
BsrI	ACTGG	3 cut(s)	119, 428, 1027
BssECI	CCNNGG	5 cut(s)	278, 290, 350, 1122, 1270
BssMI	GATC	7 cut(s)	20, 246, 253, 369, 554, 856, 937
BssNI	GRCGYC	4 cut(s)	165, 408, 1140, 1197
BssT1I	CCWWGG	1 cut(s)	1122
Bst4CI	ACNGT	3 cut(s)	194, 282, 395
Bst6I	CTCTTC	3 cut(s)	705, 1219, 1269
BstACI	GRCGYC	4 cut(s)	165, 408, 1140, 1197
BstBI	TTCGAA	1 cut(s)	307
BstC8I	GCNNGC	1 cut(s)	467
BstDEI	CTNAG	3 cut(s)	378, 711, 887
BstDSI	CCRYGG	3 cut(s)	278, 1122, 1270
BstEII	GGTNACC	1 cut(s)	1220
BstF5I	GGATG	3 cut(s)	342, 683, 918
BstH2I	RGCGCY	1 cut(s)	999
BstHHI	GCGC	2 cut(s)	998, 1277
BstKTI	GATC	7 cut(s)	23, 249, 256, 372, 557, 859, 940
BstMAI	GTCTC	1 cut(s)	1185
BstMBI	GATC	7 cut(s)	20, 246, 253, 369, 554, 856, 937
BstMCI	CGRYCG	2 cut(s)	296, 666
BstMWI	GCNNNNNNNGC	4 cut(s)	466, 979, 1088, 1109
BstNSI	RCATGY	2 cut(s)	127, 626
BstPI	GGTNACC	1 cut(s)	1220
BstSCI	CCNGG	1 cut(s)	332
BstSFI	CTRYAG	2 cut(s)	467, 774
BstV1I	GCAGC	7 cut(s)	60, 169, 481, 508, 586, 589, 1144
BstV2I	GAAGAC	1 cut(s)	409
BstX2I	RGATCY	2 cut(s)	20, 554
BstYI	RGATCY	2 cut(s)	20, 554
BstZI	CGGCCG	1 cut(s)	293
Bsu36I	CCTNAGG	1 cut(s)	711
BsuRI	GGCC	8 cut(s)	13, 118, 208, 295, 593, 772, 868, 917
BtgI	CCRYGG	3 cut(s)	278, 1122, 1270
BtsCI	GGATG	3 cut(s)	342, 683, 918
BtsIMutI	CAGTG	2 cut(s)	112, 512
Cac8I	GCNNGC	1 cut(s)	467
CaiI	CAGNNNCTG	1 cut(s)	114
CciI	TCATGA	1 cut(s)	637
CfoI	GCGC	2 cut(s)	998, 1277
Cfr13I	GGNCC	6 cut(s)	207, 447, 770, 866, 964, 1163
CseI	GACGC	2 cut(s)	416, 1205
Csp6I	GTAC	3 cut(s)	391, 795, 873
CviQI	GTAC	3 cut(s)	391, 795, 873
DdeI	CTNAG	3 cut(s)	378, 711, 887
DpnI	GATC	7 cut(s)	22, 248, 255, 371, 556, 858, 939
DpnII	GATC	7 cut(s)	20, 246, 253, 369, 554, 856, 937
DrdI	GACNNNNNNGTC	2 cut(s)	413, 1199
DseDI	GACNNNNNNGTC	2 cut(s)	413, 1199
EaeI	YGGCCR	1 cut(s)	293
EagI	CGGCCG	1 cut(s)	293
Eam1104I	CTCTTC	3 cut(s)	705, 1219, 1269
EarI	CTCTTC	3 cut(s)	705, 1219, 1269
Ecl136II	GAGCTC	2 cut(s)	377, 823
EclXI	CGGCCG	1 cut(s)	293
Eco130I	CCWWGG	1 cut(s)	1122
Eco147I	AGGCCT	1 cut(s)	593
Eco24I	GRGCYC	2 cut(s)	379, 825
Eco47I	GGWCC	3 cut(s)	447, 964, 1163
Eco52I	CGGCCG	1 cut(s)	293
Eco53kI	GAGCTC	2 cut(s)	377, 823
Eco81I	CCTNAGG	1 cut(s)	711
Eco88I	CYCGRG	1 cut(s)	824
Eco91I	GGTNACC	1 cut(s)	1220
EcoICRI	GAGCTC	2 cut(s)	377, 823
EcoO109I	RGGNCCY	2 cut(s)	207, 1163
EcoO65I	GGTNACC	1 cut(s)	1220
EcoRI	GAATTC	1 cut(s)	309
EcoT14I	CCWWGG	1 cut(s)	1122
EcoT38I	GRGCYC	2 cut(s)	379, 825
ErhI	CCWWGG	1 cut(s)	1122
Esp3I	CGTCTC	1 cut(s)	1185
FaqI	GGGAC	3 cut(s)	368, 837, 1176
FauI	CCCGC	2 cut(s)	1096, 1153
Fnu4HI	GCNGC	8 cut(s)	49, 158, 470, 522, 575, 578, 1113, 1158
FokI	GGATG	3 cut(s)	349, 670, 925
FriOI	GRGCYC	2 cut(s)	379, 825
Fsp4HI	GCNGC	8 cut(s)	49, 158, 470, 522, 575, 578, 1113, 1158
FspBI	CTAG	6 cut(s)	15, 42, 120, 780, 786, 876
GlaI	GCGC	2 cut(s)	997, 1276
GluI	GCNGC	8 cut(s)	49, 158, 470, 522, 575, 578, 1113, 1158
HaeII	RGCGCY	1 cut(s)	999
HaeIII	GGCC	8 cut(s)	13, 118, 208, 295, 593, 772, 868, 917
HapII	CCGG	3 cut(s)	266, 296, 333
HgaI	GACGC	2 cut(s)	416, 1205
HhaI	GCGC	2 cut(s)	998, 1277
Hin1I	GRCGYC	4 cut(s)	165, 408, 1140, 1197
Hin6I	GCGC	2 cut(s)	996, 1275
HinP1I	GCGC	2 cut(s)	996, 1275
HincII	GTYRAC	1 cut(s)	1033
HindII	GTYRAC	1 cut(s)	1033
HindIII	AAGCTT	1 cut(s)	458
HinfI	GANTC	5 cut(s)	262, 304, 343, 725, 1057
HpaI	GTTAAC	1 cut(s)	1033
HpaII	CCGG	3 cut(s)	266, 296, 333
Hpy166II	GTNNAC	1 cut(s)	1033
Hpy188I	TCNGA	6 cut(s)	351, 374, 550, 681, 820, 1190
Hpy8I	GTNNAC	1 cut(s)	1033
Hpy99I	CGWCG	3 cut(s)	1142, 1145, 1199
HpyAV	CCTTC	6 cut(s)	537, 604, 765, 943, 1177, 1265
HpyCH4III	ACNGT	3 cut(s)	194, 282, 395
HpyCH4IV	ACGT	4 cut(s)	165, 1035, 1140, 1173
HpyCH4V	TGCA	4 cut(s)	48, 469, 973, 1091
HpyF10VI	GCNNNNNNNGC	4 cut(s)	466, 979, 1088, 1109
HpyF3I	CTNAG	3 cut(s)	378, 711, 887
HpySE526I	ACGT	4 cut(s)	165, 1035, 1140, 1173
Hsp92I	GRCGYC	4 cut(s)	165, 408, 1140, 1197
HspAI	GCGC	2 cut(s)	996, 1275
KflI	GGGWCCC	1 cut(s)	1163
Kpn2I	TCCGGA	1 cut(s)	265
KspAI	GTTAAC	1 cut(s)	1033
Kzo9I	GATC	7 cut(s)	20, 246, 253, 369, 554, 856, 937
LguI	GCTCTTC	1 cut(s)	705
LmnI	GCTCC	5 cut(s)	82, 268, 298, 387, 1100
Lsp1109I	GCAGC	7 cut(s)	60, 169, 481, 508, 586, 589, 1144
LweI	GCATC	1 cut(s)	963
MaeI	CTAG	6 cut(s)	15, 42, 120, 780, 786, 876
MaeII	ACGT	4 cut(s)	165, 1035, 1140, 1173
MaeIII	GTNAC	5 cut(s)	404, 628, 1000, 1220, 1249
MalI	GATC	7 cut(s)	22, 248, 255, 371, 556, 858, 939
MbiI	CCGCTC	1 cut(s)	1103
MboI	GATC	7 cut(s)	20, 246, 253, 369, 554, 856, 937
MflI	RGATCY	2 cut(s)	20, 554
MhlI	GDGCHC	2 cut(s)	379, 825
MluCI	AATT	2 cut(s)	309, 985
MlyI	GAGTC	2 cut(s)	256, 1051
MmeI	TCCRAC	2 cut(s)	672, 1037
MroI	TCCGGA	1 cut(s)	265
MseI	TTAA	3 cut(s)	477, 654, 1032
MslI	CAYNNNNRTG	1 cut(s)	959
MspI	CCGG	3 cut(s)	266, 296, 333
MspR9I	CCNGG	1 cut(s)	334
Mva1269I	GAATGC	1 cut(s)	1145
MwoI	GCNNNNNNNGC	4 cut(s)	466, 979, 1088, 1109
NciI	CCSGG	1 cut(s)	334
NcoI	CCATGG	1 cut(s)	1122
NdeII	GATC	7 cut(s)	20, 246, 253, 369, 554, 856, 937
NlaIV	GGNNCC	7 cut(s)	209, 270, 287, 428, 1027, 1164, 1165
NmeAIII	GCCGAG	1 cut(s)	271
NmuCI	GTSAC	3 cut(s)	404, 1000, 1220
NspI	RCATGY	2 cut(s)	127, 626
NspV	TTCGAA	1 cut(s)	307
PaeR7I	CTCGAG	1 cut(s)	824
PagI	TCATGA	1 cut(s)	637
PceI	AGGCCT	1 cut(s)	593
PciI	ACATGT	1 cut(s)	622
PciSI	GCTCTTC	1 cut(s)	705
PcsI	WCGNNNNNNNCGW	1 cut(s)	1146
PctI	GAATGC	1 cut(s)	1145
PfeI	GAWTC	3 cut(s)	304, 343, 725
PflFI	GACNNNGTC	1 cut(s)	1199
PflMI	CCANNNNNTGG	1 cut(s)	1242
PfoI	TCCNGGA	1 cut(s)	332
PkrI	GCNGC	8 cut(s)	50, 159, 471, 523, 576, 579, 1114, 1159
PleI	GAGTC	2 cut(s)	256, 1051
PpsI	GAGTC	2 cut(s)	256, 1051
PpuMI	RGGWCCY	1 cut(s)	1163
PscI	ACATGT	1 cut(s)	622
Psp124BI	GAGCTC	2 cut(s)	379, 825
Psp1406I	AACGTT	1 cut(s)	1035
Psp5II	RGGWCCY	1 cut(s)	1163
PspEI	GGTNACC	1 cut(s)	1220
PspN4I	GGNNCC	7 cut(s)	209, 270, 287, 428, 1027, 1164, 1165
PspPI	GGNCC	6 cut(s)	207, 447, 770, 866, 964, 1163
PspPPI	RGGWCCY	1 cut(s)	1163
PstI	CTGCAG	1 cut(s)	471
PstNI	CAGNNNCTG	1 cut(s)	114
PsuI	RGATCY	2 cut(s)	20, 554
PsyI	GACNNNGTC	1 cut(s)	1199
RsaI	GTAC	3 cut(s)	392, 796, 874
RsaNI	GTAC	3 cut(s)	391, 795, 873
RseI	CAYNNNNRTG	1 cut(s)	959
SacI	GAGCTC	2 cut(s)	379, 825
SapI	GCTCTTC	1 cut(s)	705
SaqAI	TTAA	3 cut(s)	477, 654, 1032
SatI	GCNGC	8 cut(s)	49, 158, 470, 522, 575, 578, 1113, 1158
Sau3AI	GATC	7 cut(s)	20, 246, 253, 369, 554, 856, 937
Sau96I	GGNCC	6 cut(s)	207, 447, 770, 866, 964, 1163
ScaI	AGTACT	1 cut(s)	796
SchI	GAGTC	2 cut(s)	256, 1051
ScrFI	CCNGG	1 cut(s)	334
SduI	GDGCHC	2 cut(s)	379, 825
SfaNI	GCATC	1 cut(s)	963
SfcI	CTRYAG	2 cut(s)	467, 774
Sfr274I	CTCGAG	1 cut(s)	824
SfuI	TTCGAA	1 cut(s)	307
SinI	GGWCC	3 cut(s)	447, 964, 1163
SlaI	CTCGAG	1 cut(s)	824
SmiMI	CAYNNNNRTG	1 cut(s)	959
SmlI	CTYRAG	2 cut(s)	824, 919
SmoI	CTYRAG	2 cut(s)	824, 919
SpeI	ACTAGT	1 cut(s)	875
Sse9I	AATT	2 cut(s)	309, 985
SseBI	AGGCCT	1 cut(s)	593
SsiI	CCGC	4 cut(s)	666, 1103, 1112, 1160
SspMI	CTAG	6 cut(s)	15, 42, 120, 780, 786, 876
SstI	GAGCTC	2 cut(s)	379, 825
StuI	AGGCCT	1 cut(s)	593
StyD4I	CCNGG	1 cut(s)	332
StyI	CCWWGG	1 cut(s)	1122
TaaI	ACNGT	3 cut(s)	194, 282, 395
TaiI	ACGT	4 cut(s)	168, 1038, 1143, 1176
TaqI	TCGA	4 cut(s)	249, 307, 825, 1149
TaqII	GACCGA	1 cut(s)	661
TasI	AATT	2 cut(s)	309, 985
TatI	WGTACW	2 cut(s)	794, 872
TauI	GCSGC	1 cut(s)	1115
TfiI	GAWTC	3 cut(s)	304, 343, 725
Tru1I	TTAA	3 cut(s)	477, 654, 1032
Tru9I	TTAA	3 cut(s)	477, 654, 1032
TscAI	CASTG	2 cut(s)	119, 519
TseFI	GTSAC	3 cut(s)	404, 1000, 1220
TseI	GCWGC	7 cut(s)	48, 157, 469, 521, 574, 577, 1157
Tsp45I	GTSAC	3 cut(s)	404, 1000, 1220
TspRI	CASTG	2 cut(s)	119, 519
Tth111I	GACNNNGTC	1 cut(s)	1199
Van91I	CCANNNNNTGG	1 cut(s)	1242
VpaK11BI	GGWCC	3 cut(s)	447, 964, 1163
XapI	RAATTY	1 cut(s)	309
XceI	RCATGY	2 cut(s)	127, 626
XcmI	CCANNNNNNNNNTGG	1 cut(s)	279
XhoI	CTCGAG	1 cut(s)	824
XspI	CTAG	6 cut(s)	15, 42, 120, 780, 786, 876
ZraI	GACGTC	2 cut(s)	166, 1141
ZrmI	AGTACT	1 cut(s)	796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.