Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0006673

Physical Location & Seq

Genomic Coordinates Reverse (-)

60114799 .. 60118936

Gene Structure 4138 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0444800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGAGAGGATTTGTGATTTTCGCCATTGTTGTTGAGGCAGTGGAGCTCGCTCTTCAGCTTCAACTCTTCACTCAAATCGAGCAATTGACAGTGTGTGGGAGAAGCCAAAGTTATCCAATTTCCAATCCAACTATTGCTCCAAAGTCCAAACACCAAGGAAAAGGTAGAAGGGAGAATTTGCTACTTGCATACAAGACACTGGGAGTAGTGTTTGGAGGACTTGTTACATCCCCACTGTATGTGTACCCTTCCATGCCACTCAAGTCTCCGACCGAAGATGACTATTTGGGCATTTACAGCATTATGTTTTGGACTCTTACCCTCATTGGGGTTGTCAAATATGCTGGCATTGCTCTCAAAGCCGATGATCAAGGCGAAGGTGGGACTTTTGCCTTGTATTCATTACTTTGCAGGAATATGAATATTGGAATCCTCTCTTCAAGACCTTCAAATCCAAACTCAAGTCTTTCACACTCTATCTATGATGAGGGCACTGAAAATCAGAGTAGGCTTGCAAAATTTTTCAAGAAAAGTATAGTTGCTAGAAGATTATTGCTTTTTATTGCCATGTTAGGCATGTGCATGGTTATTGGAGATGGCATTCTTACACCTGCAATATCTGTCTTGTCAGCAATAGATGGAGTAAGGGCACCTTTTCCATCTATCAAATCATCTGTTGTGGAAGCGCTTTCTGCAGTAGTCCTTATCATTCTTTTTTTATTACAAAAGTTTGGAATTTATAGCATCATAAGTCATTATCCAAGCATATTCAAGGCCATATCACCACACTATATCTTCCGTTTCTTTTGGAGAAACGGTAAGGAAGGCTGGTTGTTGCTTAGTGGAACTGTCCTTTGCATCACAGGGTCCGAGGCATTGTTTGCAGATCTTGGTCATTTCAACCGAAGCTCCATTCAGATAGCTTTCTTGTTTACCATTTATCCTTCTCTGGTTCTGACATATGCGGGGCAGACAGCATACCTGATCAAGAATCCAAATGATCATAATGATGGATTCTATAAGTTTATACCAACTACTATCTACTGGCCTATCTTTATCATATCTACATTAGCTGCAATAGTTGCAAGCCAGTCTCTGATATCAGCCACATTTTCGGTAATCAAGCAATCTGTAGTACTTGATTATTTCCCTCGAGTGAAGGTTGTGCACACATCCCCTAGCAAAGAAGGCGAGGTTTACTCCCCTGAAGTCAATTACATTCTCATGGTTCTCTGTGTTGCTGTCATACTTATATTTGGGGATGGAAAAGACATAGGAAATGCATTTGGTGTTGTTGTCAGCTTAGTCATGCTCATCACCACAATATTACTAACACTGGTAATGGTCATAATATGGAGAACACCACCGGTGCTGGTGGCTCTCTACTTCTCTATCTTCTTTGTGATGGAAGGCGTTTATGTGAGTGCAGTGTTCACCAAGATCACTGAAGGTGGATGGATTCCTTTTGCCATATCTTTTATCCTTGCCTTCATTATGTTCGGTTGGTACTATGGAAGACAAAGGAAGATAGAGTACGAGTTGACTCACAAAATAACCCTAGACAAACTTGGACTGCTATTATCTAATCCCAGTGTTCAAAGGGTTCCTGGATTCTGCTTGTTTTACTCCAACATTCAAGACGGGCTTACTCCGATTCTCGGACACTATATTAAAAACATGAAATCCCTTTACCAGGTCACCATGTTCACTGCTCTTCGATACTTATTGGTTCCTAAGGTTGCTCCTCATGAGAGGATTGTTATCAGCAAACTTGGCCTGAAAGGGGTTTATGGGTGTGTTATTCAGTATGGCTATGCAGATCCCCTAAACCTCGAAGGAGAAGATTTTGTCAGCCAAGTTACAAATAGTTTGCTGGCACATATACAGGACAGCTCGGGCTGTCGGCCATCTGATCCTGCAGAGATCCAACAAGAGATGTCTAATTTGGAAGAAGCAATGAGTGCTGGAATAGTTCATATTCGAGGAAAGACGAGGTTTTATATTAGCAAGAGTTGTGGCTGGTTTGATAAAATTATGCTCGCATTTTATGAAGTTCTGCACAGTAACTGTAGGTCTGCTCTGCCTGCTCTTGGGGTGCCACTGCGTCAGCGTATCGAGGTTGGAATGCTCTATGAGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007163 GO:0007275 GO:0008150 GO:0008284 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010075 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030010 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040008 GO:0042127 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048522 GO:0048608 GO:0048638 GO:0048646 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048859 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090451 GO:0090691 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04550 map04550

Pfam Domains

Protein Families

Homeobox

Protein Analysis

713

Amino Acids

79.28

Weight (kDa)

8.88

Isoelectric Point (pI)

43.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	63 - 247	3.3e-44	K+ potassium transporter integral membrane domain
K_trans	PF02705	244 - 522	2.2e-96	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	536 - 711	7.6e-16	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006673)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33880 AT2G33880
fragaria_vesca	FvH4_3g08310 FvH4_3g08310 FvH4_3g08310 FvH4_3g10130 FvH4_3g10130 FvH4_3g10130 FvH4_3g10130 FvH4_3g10130
malus_domestica	MD05G1307400.v1.1 MD10G1286500.v1.1
prunus_persica	Prupe.4G055300_v2.0.a1
pyrus_communis	pycom05g28410
rosa_chinensis	RchiOBHm_Chr5g0009691
rosa_laevigata	RLG00000031680
rosa_multiflora	Rmu_co8361113.1_g000001 Rmu_sc0019694.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066520
rosa_rugosa	Rorug04G0444800 Rorug04G0444900
rosa_samantha	Rh5AG076400 Rh5BG071600 Rh5CG084200 Rh5DG072200
rosa_wichuraiana	Rw5G007040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	619
Acc36I	ACCTGC	1 cut(s)	619
AccB1I	GGYRCC	2 cut(s)	649, 2095
AciI	CCGC	1 cut(s)	965
AclWI	GGATC	3 cut(s)	1814, 1907, 1918
AcoI	YGGCCR	1 cut(s)	1904
AcsI	RAATTY	3 cut(s)	175, 518, 735
AcuI	CTGAAG	3 cut(s)	38, 1227, 1467
AfaI	GTAC	4 cut(s)	245, 1137, 1508, 1535
AfeI	AGCGCT	1 cut(s)	687
AfiI	CCNNNNNNNGG	6 cut(s)	327, 328, 1658, 1693, 1783, 2090
AgeI	ACCGGT	1 cut(s)	1366
AgsI	TTSAA	8 cut(s)	62, 441, 450, 526, 772, 901, 1598, 1637
AjnI	CCWGG	2 cut(s)	1606, 1692
AluBI	AGCT	7 cut(s)	46, 58, 909, 923, 1073, 1302, 1893
AluI	AGCT	7 cut(s)	46, 58, 909, 923, 1073, 1302, 1893
Alw21I	GWGCWC	2 cut(s)	48, 1170
Alw26I	GTCTC	2 cut(s)	270, 1098
Alw44I	GTGCAC	1 cut(s)	1166
AlwI	GGATC	3 cut(s)	1814, 1907, 1918
AlwNI	CAGNNNCTG	2 cut(s)	1096, 2067
Ama87I	CYCGRG	2 cut(s)	1152, 1894
Aor51HI	AGCGCT	1 cut(s)	687
AoxI	GGCC	4 cut(s)	774, 1046, 1774, 1904
ApaLI	GTGCAC	1 cut(s)	1166
ApeKI	GCWGC	1 cut(s)	1073
ApoI	RAATTY	3 cut(s)	175, 518, 735
AsiGI	ACCGGT	1 cut(s)	1366
AspLEI	GCGC	1 cut(s)	688
AspS9I	GGNCC	1 cut(s)	867
AsuHPI	GGTGA	4 cut(s)	774, 1309, 1426, 1690
AvaI	CYCGRG	2 cut(s)	1152, 1894
AvaII	GGWCC	1 cut(s)	867
AxyI	CCTNAGG	1 cut(s)	1734
BaeGI	GKGCMC	3 cut(s)	494, 652, 1170
BanI	GGYRCC	2 cut(s)	649, 2095
BanII	GRGCYC	1 cut(s)	48
BarI	GAAGNNNNNNTAC	2 cut(s)	1517, 1549
BbsI	GAAGAC	1 cut(s)	1522
Bbv12I	GWGCWC	2 cut(s)	48, 1170
BbvI	GCAGC	1 cut(s)	1060
BccI	CCATC	8 cut(s)	590, 632, 667, 1004, 1256, 1399, 1449, 1915
BciT130I	CCWGG	2 cut(s)	1608, 1694
BclI	TGATCA	3 cut(s)	367, 984, 1000
BcoDI	GTCTC	2 cut(s)	270, 1098
BfaI	CTAG	3 cut(s)	543, 1179, 1559
BfmI	CTRYAG	4 cut(s)	693, 1131, 1917, 2068
BfoI	RGCGCY	1 cut(s)	689
BfuAI	ACCTGC	1 cut(s)	619
BglII	AGATCT	1 cut(s)	886
BisI	GCNGC	1 cut(s)	1074
BlsI	GCNGC	1 cut(s)	1075
BmcAI	AGTACT	1 cut(s)	1137
Bme1390I	CCNGG	2 cut(s)	1608, 1694
Bme18I	GGWCC	1 cut(s)	867
BmeT110I	CYCGRG	2 cut(s)	1152, 1894
BmgT120I	GGNCC	1 cut(s)	867
BmiI	GGNNCC	5 cut(s)	651, 868, 1605, 1731, 2097
BmrFI	CCNGG	2 cut(s)	1608, 1694
BmrI	ACTGGG	2 cut(s)	209, 1584
BmsI	GCATC	2 cut(s)	753, 867
BmuI	ACTGGG	2 cut(s)	209, 1584
BpiI	GAAGAC	1 cut(s)	1522
BplI	GAGNNNNNCTC	2 cut(s)	1184, 1216
BpuEI	CTTGAG	2 cut(s)	245, 445
BsaBI	GATNNNNATC	1 cut(s)	1760
BsaJI	CCNNGG	2 cut(s)	154, 870
BsaWI	WCCGGW	1 cut(s)	1366
BsaXI	ACNNNNNCTCC	8 cut(s)	121, 151, 207, 237, 802, 832, 893, 923
Bsc4I	CCNNNNNNNGG	6 cut(s)	327, 328, 1658, 1693, 1783, 2090
Bse118I	RCCGGY	1 cut(s)	1366
Bse1I	ACTGG	5 cut(s)	204, 1049, 1090, 1341, 1590
Bse21I	CCTNAGG	1 cut(s)	1734
Bse3DI	GCAATG	2 cut(s)	348, 1962
Bse8I	GATNNNNATC	1 cut(s)	1760
BseBI	CCWGG	2 cut(s)	1608, 1694
BseDI	CCNNGG	2 cut(s)	154, 870
BseGI	GGATG	4 cut(s)	227, 1172, 1267, 1460
BseJI	GATNNNNATC	1 cut(s)	1760
BseLI	CCNNNNNNNGG	6 cut(s)	327, 328, 1658, 1693, 1783, 2090
BseMI	GCAATG	2 cut(s)	348, 1962
BseNI	ACTGG	5 cut(s)	204, 1049, 1090, 1341, 1590
BseRI	GAGGAG	1 cut(s)	1734
BseSI	GKGCMC	3 cut(s)	494, 652, 1170
BseXI	GCAGC	1 cut(s)	1060
BsgI	GTGCAG	2 cut(s)	1446, 2042
Bsh1285I	CGRYCG	1 cut(s)	273
BshFI	GGCC	4 cut(s)	776, 1048, 1776, 1906
BshNI	GGYRCC	2 cut(s)	649, 2095
BshTI	ACCGGT	1 cut(s)	1366
BsiEI	CGRYCG	1 cut(s)	273
BsiHKAI	GWGCWC	2 cut(s)	48, 1170
BsiHKCI	CYCGRG	2 cut(s)	1152, 1894
BsiSI	CCGG	1 cut(s)	1367
BslFI	GGGAC	1 cut(s)	397
BslI	CCNNNNNNNGG	6 cut(s)	327, 328, 1658, 1693, 1783, 2090
BsmAI	GTCTC	2 cut(s)	270, 1098
BsmFI	GGGAC	1 cut(s)	397
BsmI	GAATGC	2 cut(s)	600, 2130
BsnI	GGCC	4 cut(s)	776, 1048, 1776, 1906
BsoBI	CYCGRG	2 cut(s)	1152, 1894
Bsp1286I	GDGCHC	4 cut(s)	48, 494, 652, 1170
Bsp143I	GATC	8 cut(s)	367, 886, 984, 1000, 1440, 1819, 1912, 1923
BspACI	CCGC	1 cut(s)	965
BspANI	GGCC	4 cut(s)	776, 1048, 1776, 1906
BspHI	TCATGA	1 cut(s)	1747
BspLI	GGNNCC	5 cut(s)	651, 868, 1605, 1731, 2097
BspMAI	CTGCAG	2 cut(s)	697, 1921
BspMI	ACCTGC	1 cut(s)	619
BspPI	GGATC	3 cut(s)	1814, 1907, 1918
BspQI	GCTCTTC	2 cut(s)	57, 1719
BspT107I	GGYRCC	2 cut(s)	649, 2095
BsrDI	GCAATG	2 cut(s)	348, 1962
BsrFI	RCCGGY	1 cut(s)	1366
BsrI	ACTGG	5 cut(s)	204, 1049, 1090, 1341, 1590
BssAI	RCCGGY	1 cut(s)	1366
BssECI	CCNNGG	2 cut(s)	154, 870
BssMI	GATC	8 cut(s)	367, 886, 984, 1000, 1440, 1819, 1912, 1923
BssT1I	CCWWGG	1 cut(s)	154
Bst2UI	CCWGG	2 cut(s)	1608, 1694
Bst4CI	ACNGT	6 cut(s)	91, 237, 818, 850, 2063, 2069
Bst6I	CTCTTC	4 cut(s)	57, 71, 442, 1719
BstAPI	GCANNNNNTGC	3 cut(s)	881, 1082, 1961
BstC8I	GCNNGC	7 cut(s)	48, 346, 513, 1087, 1875, 2040, 2085
BstDEI	CTNAG	3 cut(s)	839, 1303, 1734
BstEII	GGTNACC	1 cut(s)	1696
BstENI	CCTNNNNNAGG	1 cut(s)	1691
BstF5I	GGATG	4 cut(s)	227, 1172, 1267, 1460
BstH2I	RGCGCY	1 cut(s)	689
BstHHI	GCGC	1 cut(s)	688
BstKTI	GATC	8 cut(s)	370, 889, 987, 1003, 1443, 1822, 1915, 1926
BstMAI	GTCTC	2 cut(s)	270, 1098
BstMBI	GATC	8 cut(s)	367, 886, 984, 1000, 1440, 1819, 1912, 1923
BstMCI	CGRYCG	1 cut(s)	273
BstNI	CCWGG	2 cut(s)	1608, 1694
BstNSI	RCATGY	1 cut(s)	580
BstPI	GGTNACC	1 cut(s)	1696
BstSCI	CCNGG	2 cut(s)	1606, 1692
BstSFI	CTRYAG	4 cut(s)	693, 1131, 1917, 2068
BstSLI	GKGCMC	3 cut(s)	494, 652, 1170
BstV1I	GCAGC	1 cut(s)	1060
BstV2I	GAAGAC	1 cut(s)	1522
BstX2I	RGATCY	3 cut(s)	886, 1819, 1923
BstYI	RGATCY	3 cut(s)	886, 1819, 1923
Bsu36I	CCTNAGG	1 cut(s)	1734
BsuRI	GGCC	4 cut(s)	776, 1048, 1776, 1906
BtsCI	GGATG	4 cut(s)	227, 1172, 1267, 1460
BtsI	GCAGTG	4 cut(s)	45, 1434, 1707, 2099
BveI	ACCTGC	1 cut(s)	619
Cac8I	GCNNGC	7 cut(s)	48, 346, 513, 1087, 1875, 2040, 2085
CaiI	CAGNNNCTG	2 cut(s)	1096, 2067
CciI	TCATGA	1 cut(s)	1747
CfoI	GCGC	1 cut(s)	688
Cfr10I	RCCGGY	1 cut(s)	1366
Cfr13I	GGNCC	1 cut(s)	867
CseI	GACGC	1 cut(s)	2093
CsiI	ACCWGGT	1 cut(s)	1692
Csp6I	GTAC	4 cut(s)	244, 1136, 1507, 1534
CspAI	ACCGGT	1 cut(s)	1366
CspCI	CAANNNNNGTGG	2 cut(s)	1996, 2031
CviAII	CATG	9 cut(s)	253, 568, 577, 583, 1225, 1309, 1678, 1702, 1748
CviQI	GTAC	4 cut(s)	244, 1136, 1507, 1534
DdeI	CTNAG	3 cut(s)	839, 1303, 1734
DpnI	GATC	8 cut(s)	369, 888, 986, 1002, 1442, 1821, 1914, 1925
DpnII	GATC	8 cut(s)	367, 886, 984, 1000, 1440, 1819, 1912, 1923
EaeI	YGGCCR	1 cut(s)	1904
Eam1104I	CTCTTC	4 cut(s)	57, 71, 442, 1719
EarI	CTCTTC	4 cut(s)	57, 71, 442, 1719
Ecl136II	GAGCTC	1 cut(s)	46
Eco130I	CCWWGG	1 cut(s)	154
Eco24I	GRGCYC	1 cut(s)	48
Eco32I	GATATC	1 cut(s)	1101
Eco47I	GGWCC	1 cut(s)	867
Eco47III	AGCGCT	1 cut(s)	687
Eco53kI	GAGCTC	1 cut(s)	46
Eco57I	CTGAAG	3 cut(s)	38, 1227, 1467
Eco81I	CCTNAGG	1 cut(s)	1734
Eco88I	CYCGRG	2 cut(s)	1152, 1894
Eco91I	GGTNACC	1 cut(s)	1696
EcoICRI	GAGCTC	1 cut(s)	46
EcoNI	CCTNNNNNAGG	1 cut(s)	1691
EcoO65I	GGTNACC	1 cut(s)	1696
EcoRII	CCWGG	2 cut(s)	1606, 1692
EcoRV	GATATC	1 cut(s)	1101
EcoT14I	CCWWGG	1 cut(s)	154
EcoT22I	ATGCAT	1 cut(s)	1285
EcoT38I	GRGCYC	1 cut(s)	48
ErhI	CCWWGG	1 cut(s)	154
FaeI	CATG	9 cut(s)	256, 571, 580, 586, 1228, 1312, 1681, 1705, 1751
FalI	AAGNNNNNCTT	4 cut(s)	637, 669, 1629, 1661
FaqI	GGGAC	1 cut(s)	397
FatI	CATG	9 cut(s)	252, 567, 576, 582, 1224, 1308, 1677, 1701, 1747
FauI	CCCGC	1 cut(s)	958
FauNDI	CATATG	1 cut(s)	961
FbaI	TGATCA	3 cut(s)	367, 984, 1000
Fnu4HI	GCNGC	1 cut(s)	1074
FokI	GGATG	4 cut(s)	214, 1159, 1274, 1467
FriOI	GRGCYC	1 cut(s)	48
Fsp4HI	GCNGC	1 cut(s)	1074
FspBI	CTAG	3 cut(s)	543, 1179, 1559
GlaI	GCGC	1 cut(s)	687
GluI	GCNGC	1 cut(s)	1074
HaeII	RGCGCY	1 cut(s)	689
HaeIII	GGCC	4 cut(s)	776, 1048, 1776, 1906
HapII	CCGG	1 cut(s)	1367
HgaI	GACGC	1 cut(s)	2093
HhaI	GCGC	1 cut(s)	688
Hin1II	CATG	9 cut(s)	256, 571, 580, 586, 1228, 1312, 1681, 1705, 1751
Hin6I	GCGC	1 cut(s)	686
HinP1I	GCGC	1 cut(s)	686
HincII	GTYRAC	1 cut(s)	1542
HindII	GTYRAC	1 cut(s)	1542
HinfI	GANTC	8 cut(s)	313, 429, 991, 1014, 1459, 1543, 1611, 1654
HpaII	CCGG	1 cut(s)	1367
HphI	GGTGA	4 cut(s)	774, 1309, 1426, 1690
Hpy166II	GTNNAC	7 cut(s)	244, 933, 1168, 1198, 1434, 1542, 1707
Hpy188I	TCNGA	9 cut(s)	270, 504, 871, 918, 957, 1098, 1653, 1661, 1912
Hpy188III	TCNNGA	5 cut(s)	441, 526, 988, 1637, 1748
Hpy8I	GTNNAC	7 cut(s)	244, 933, 1168, 1198, 1434, 1542, 1707
HpyCH4III	ACNGT	6 cut(s)	91, 237, 818, 850, 2063, 2069
HpyF3I	CTNAG	3 cut(s)	839, 1303, 1734
Hsp92II	CATG	9 cut(s)	256, 571, 580, 586, 1228, 1312, 1681, 1705, 1751
HspAI	GCGC	1 cut(s)	686
Ksp22I	TGATCA	3 cut(s)	367, 984, 1000
Kzo9I	GATC	8 cut(s)	367, 886, 984, 1000, 1440, 1819, 1912, 1923
LguI	GCTCTTC	2 cut(s)	57, 1719
LmnI	GCTCC	4 cut(s)	43, 142, 914, 1747
Lsp1109I	GCAGC	1 cut(s)	1060
LweI	GCATC	2 cut(s)	753, 867
MabI	ACCWGGT	1 cut(s)	1692
MaeI	CTAG	3 cut(s)	543, 1179, 1559
MaeIII	GTNAC	4 cut(s)	223, 1696, 1858, 2063
MalI	GATC	8 cut(s)	369, 888, 986, 1002, 1442, 1821, 1914, 1925
MboI	GATC	8 cut(s)	367, 886, 984, 1000, 1440, 1819, 1912, 1923
MfeI	CAATTG	1 cut(s)	83
MflI	RGATCY	3 cut(s)	886, 1819, 1923
MhlI	GDGCHC	4 cut(s)	48, 494, 652, 1170
MluCI	AATT	8 cut(s)	83, 117, 175, 518, 735, 1213, 1942, 2031
MlyI	GAGTC	2 cut(s)	307, 1537
MmeI	TCCRAC	5 cut(s)	152, 293, 1653, 1951, 2101
Mph1103I	ATGCAT	1 cut(s)	1285
MseI	TTAA	1 cut(s)	1671
MslI	CAYNNNNRTG	3 cut(s)	581, 1008, 1223
MspI	CCGG	1 cut(s)	1367
MspR9I	CCNGG	2 cut(s)	1608, 1694
MunI	CAATTG	1 cut(s)	83
Mva1269I	GAATGC	2 cut(s)	600, 2130
MvaI	CCWGG	2 cut(s)	1608, 1694
NdeI	CATATG	1 cut(s)	961
NdeII	GATC	8 cut(s)	367, 886, 984, 1000, 1440, 1819, 1912, 1923
NlaIII	CATG	9 cut(s)	256, 571, 580, 586, 1228, 1312, 1681, 1705, 1751
NlaIV	GGNNCC	5 cut(s)	651, 868, 1605, 1731, 2097
NmuCI	GTSAC	1 cut(s)	1696
NsiI	ATGCAT	1 cut(s)	1285
NspI	RCATGY	1 cut(s)	580
PaeR7I	CTCGAG	1 cut(s)	1152
PagI	TCATGA	1 cut(s)	1747
PaqCI	CACCTGC	1 cut(s)	619
PciSI	GCTCTTC	2 cut(s)	57, 1719
PctI	GAATGC	2 cut(s)	600, 2130
PfeI	GAWTC	6 cut(s)	429, 991, 1014, 1459, 1611, 1654
PfoI	TCCNGGA	1 cut(s)	1606
PinAI	ACCGGT	1 cut(s)	1366
PkrI	GCNGC	1 cut(s)	1075
PleI	GAGTC	2 cut(s)	307, 1537
PpsI	GAGTC	2 cut(s)	307, 1537
Psp124BI	GAGCTC	1 cut(s)	48
Psp6I	CCWGG	2 cut(s)	1606, 1692
PspEI	GGTNACC	1 cut(s)	1696
PspGI	CCWGG	2 cut(s)	1606, 1692
PspN4I	GGNNCC	5 cut(s)	651, 868, 1605, 1731, 2097
PspPI	GGNCC	1 cut(s)	867
PspXI	VCTCGAGB	1 cut(s)	1152
PstI	CTGCAG	2 cut(s)	697, 1921
PstNI	CAGNNNCTG	2 cut(s)	1096, 2067
PsuI	RGATCY	3 cut(s)	886, 1819, 1923
RsaI	GTAC	4 cut(s)	245, 1137, 1508, 1535
RsaNI	GTAC	4 cut(s)	244, 1136, 1507, 1534
RseI	CAYNNNNRTG	3 cut(s)	581, 1008, 1223
SacI	GAGCTC	1 cut(s)	48
SapI	GCTCTTC	2 cut(s)	57, 1719
SaqAI	TTAA	1 cut(s)	1671
SatI	GCNGC	1 cut(s)	1074
Sau3AI	GATC	8 cut(s)	367, 886, 984, 1000, 1440, 1819, 1912, 1923
Sau96I	GGNCC	1 cut(s)	867
ScaI	AGTACT	1 cut(s)	1137
SchI	GAGTC	2 cut(s)	307, 1537
ScrFI	CCNGG	2 cut(s)	1608, 1694
SduI	GDGCHC	4 cut(s)	48, 494, 652, 1170
SexAI	ACCWGGT	1 cut(s)	1692
SfaNI	GCATC	2 cut(s)	753, 867
SfcI	CTRYAG	4 cut(s)	693, 1131, 1917, 2068
Sfr274I	CTCGAG	1 cut(s)	1152
SgrAI	CRCCGGYG	1 cut(s)	1366
SinI	GGWCC	1 cut(s)	867
SlaI	CTCGAG	1 cut(s)	1152
SmiMI	CAYNNNNRTG	3 cut(s)	581, 1008, 1223
SmlI	CTYRAG	3 cut(s)	260, 460, 1152
SmoI	CTYRAG	3 cut(s)	260, 460, 1152
Sse9I	AATT	8 cut(s)	83, 117, 175, 518, 735, 1213, 1942, 2031
SsiI	CCGC	1 cut(s)	965
SspI	AATATT	2 cut(s)	424, 1326
SspMI	CTAG	3 cut(s)	543, 1179, 1559
SstI	GAGCTC	1 cut(s)	48
StyD4I	CCNGG	2 cut(s)	1606, 1692
StyI	CCWWGG	1 cut(s)	154
TaaI	ACNGT	6 cut(s)	91, 237, 818, 850, 2063, 2069
TaqI	TCGA	6 cut(s)	78, 1153, 1717, 1833, 1981, 2115
TaqII	GACCGA	1 cut(s)	287
TasI	AATT	8 cut(s)	83, 117, 175, 518, 735, 1213, 1942, 2031
TatI	WGTACW	1 cut(s)	1135
TfiI	GAWTC	6 cut(s)	429, 991, 1014, 1459, 1611, 1654
Tru1I	TTAA	1 cut(s)	1671
Tru9I	TTAA	1 cut(s)	1671
TseFI	GTSAC	1 cut(s)	1696
TseI	GCWGC	1 cut(s)	1073
Tsp45I	GTSAC	1 cut(s)	1696
TspDTI	ATGAA	6 cut(s)	390, 434, 1480, 1694, 1964, 2064
TspGWI	ACGGA	1 cut(s)	788
VneI	GTGCAC	1 cut(s)	1166
VpaK11BI	GGWCC	1 cut(s)	867
XagI	CCTNNNNNAGG	1 cut(s)	1691
XapI	RAATTY	3 cut(s)	175, 518, 735
XceI	RCATGY	1 cut(s)	580
XhoI	CTCGAG	1 cut(s)	1152
XspI	CTAG	3 cut(s)	543, 1179, 1559
ZrmI	AGTACT	1 cut(s)	1137
Zsp2I	ATGCAT	1 cut(s)	1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.