Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0006673

Physical Location & Seq

Genomic Coordinates Reverse (-)

7274173 .. 7276279

Gene Structure 2107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G007040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1191 bp

ATGGCTTCATCAAACAGACACTGGCCTAGCATGTTCAAATCCAAACCCACCCACTACCAATGGCAGCATGACGTAATCAATCCCTCTATCGTGCCAAACGGTTCATGCCACAGACCCCCATACACAACCACAACGGCTACAACATCATCAGATCAAAGGACTCCGGAGCCAAAGCCGCGGTGGAACCCTCGGCCGGAGCAGATTCGAATTCTGGAAGCTATTTTCAACTCCGGGATGGTGAATCCTCCGAGGGACGAGATAAGGAAGATCAGAGCTCAGCTCCAAGAGTACGGTCAAGTCGGTGACGCCAATGTCTTCTACTGGTTCCAGAACAGAAAATCAAGGTCCAAACACAAGCTTCGCCTGCAGCACATTAACTCAAAGCAGCAGCAACAATCCCATAAACCATCACTGACTGCTGCTCCTTCATCTTCTTCTTCATCTTCGGAAAGATCCTCTCCCAACAAACAGCAGCAGCAGTCAAACAAGGCCTTCTCTATGGGGTTCTCCTCACCACCACATGTTGTTACTACTCATGATGTTTCCAACATTAACTCACCGACCGCTTCGGTCAATCAGACATCCTTTTTCCATGCTCTTCCCAACCCTGAGGTCTTGCCTGAATCAGCCTACTTCTTTCCGGTGAACAACCCTTCTACCAACGGGCCGGTAGCTAGTGCTAGTTTTAGTACTACGCAAGGGTTTTGCTTTTCCGAGCTCGCGAATGTGGTTCATGTGAATAATAGTCCCGATCTTCATGGGCCTTGTACTAGTCTTTTGCTTAGTGAGATTATGAACAACAACGGGATGGCCTCAAGGAAGAATGGTCAAGATCAAGAGATGAAGGGCATCAAGATGGACCAACTGCAACAACAGCTCAATTACAATGGCGCTGTCACCACTTCTCCAACAACTACTGGTGCCGTTAACGTTGCTGTTCCATCACCCATGACTCACATTCAAGGTGTTGGTGAAGCTGGTGCTGTAATAATGGGAGCGGGAGGTGCGGCGAAATCCATGGTGTTCATAAACGACGTCGCATTCGAGGTGGCTGCGGGACCCTTCAACGTGCGTGAGGCTTTCGGAGACGACGCCGTCCTCATTCACTCTTCTGGTCACCCTGTTCTCACCAATGAGTGGGGAGTTACCCTTCACTCTCTTCACCACGGCGCATTTTATTACCTCATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007163 GO:0007275 GO:0008150 GO:0008284 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009987 GO:0010073 GO:0010075 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030010 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040008 GO:0042127 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048518 GO:0048522 GO:0048608 GO:0048638 GO:0048646 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0048859 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090451 GO:0090691 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04550 map04550

Pfam Domains

Protein Families

Homeobox

Protein Analysis

396

Amino Acids

43.36

Weight (kDa)

8.9

Isoelectric Point (pI)

57.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	58 - 117	1.5e-11	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006673)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33880 AT2G33880
fragaria_vesca	FvH4_3g08310 FvH4_3g08310 FvH4_3g08310 FvH4_3g10130 FvH4_3g10130 FvH4_3g10130 FvH4_3g10130 FvH4_3g10130
malus_domestica	MD05G1307400.v1.1 MD10G1286500.v1.1
prunus_persica	Prupe.4G055300_v2.0.a1
pyrus_communis	pycom05g28410
rosa_chinensis	RchiOBHm_Chr5g0009691
rosa_laevigata	RLG00000031680
rosa_multiflora	Rmu_co8361113.1_g000001 Rmu_sc0019694.1_g000001
rosa_roxburghii	Rroxscaffold_1G00066520
rosa_rugosa	Rorug04G0444800 Rorug04G0444900
rosa_samantha	Rh5AG076400 Rh5BG071600 Rh5CG084200 Rh5DG072200
rosa_wichuraiana	Rw5G007040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	311, 1094
AatII	GACGTC	1 cut(s)	1038
AccB1I	GGYRCC	1 cut(s)	920
AccB7I	CCANNNNNTGG	1 cut(s)	1137
AccBSI	CCGCTC	1 cut(s)	998
AccII	CGCG	2 cut(s)	178, 722
AccIII	TCCGGA	1 cut(s)	163
AciI	CCGC	6 cut(s)	176, 178, 564, 998, 1007, 1055
AclI	AACGTT	1 cut(s)	930
AclWI	GGATC	1 cut(s)	447
AcoI	YGGCCR	1 cut(s)	191
AcsI	RAATTY	1 cut(s)	207
AcyI	GRCGYC	3 cut(s)	306, 1035, 1092
AfaI	GTAC	3 cut(s)	290, 691, 769
AfiI	CCNNNNNNNGG	2 cut(s)	193, 1137
AflIII	ACRYGT	1 cut(s)	520
AgsI	TTSAA	4 cut(s)	37, 226, 962, 1066
AhlI	ACTAGT	1 cut(s)	770
AluBI	AGCT	8 cut(s)	218, 275, 280, 358, 674, 718, 877, 977
AluI	AGCT	8 cut(s)	218, 275, 280, 358, 674, 718, 877, 977
Alw21I	GWGCWC	2 cut(s)	277, 720
Alw26I	GTCTC	1 cut(s)	1080
AlwI	GGATC	1 cut(s)	447
AlwNI	CAGNNNCTG	1 cut(s)	21
Aor13HI	TCCGGA	1 cut(s)	163
AoxI	GGCC	6 cut(s)	23, 191, 489, 665, 761, 810
ApeKI	GCWGC	8 cut(s)	64, 367, 385, 388, 419, 472, 475, 1052
ApoI	RAATTY	1 cut(s)	207
ArsI	GACNNNNNNTTYG	2 cut(s)	1025, 1057
AspLEI	GCGC	2 cut(s)	893, 1172
AspS9I	GGNCC	5 cut(s)	345, 665, 761, 859, 1058
AsuC2I	CCSGG	1 cut(s)	232
AsuII	TTCGAA	1 cut(s)	205
AvaII	GGWCC	3 cut(s)	345, 859, 1058
AxyI	CCTNAGG	1 cut(s)	609
BanI	GGYRCC	1 cut(s)	920
BanII	GRGCYC	2 cut(s)	277, 720
BbsI	GAAGAC	1 cut(s)	307
Bbv12I	GWGCWC	2 cut(s)	277, 720
BbvI	GCAGC	8 cut(s)	76, 379, 397, 400, 406, 484, 487, 1039
BccI	CCATC	5 cut(s)	229, 415, 802, 850, 949
BceAI	ACGGC	4 cut(s)	150, 908, 1079, 1183
BcgI	CGANNNNNNTGC	2 cut(s)	1034, 1068
BcnI	CCSGG	1 cut(s)	232
BcoDI	GTCTC	1 cut(s)	1080
BcuI	ACTAGT	1 cut(s)	770
BfaI	CTAG	4 cut(s)	27, 675, 681, 771
BfmI	CTRYAG	1 cut(s)	365
BfoI	RGCGCY	1 cut(s)	894
BlpI	GCTNAGC	1 cut(s)	276
BmcAI	AGTACT	1 cut(s)	691
Bme1390I	CCNGG	1 cut(s)	232
Bme18I	GGWCC	3 cut(s)	345, 859, 1058
BmgT120I	GGNCC	5 cut(s)	345, 665, 761, 859, 1058
BmiI	GGNNCC	6 cut(s)	168, 185, 326, 922, 1059, 1060
BmrFI	CCNGG	1 cut(s)	232
BmsI	GCATC	1 cut(s)	858
BpiI	GAAGAC	1 cut(s)	307
BplI	GAGNNNNNCTC	2 cut(s)	264, 296
Bpu1102I	GCTNAGC	1 cut(s)	276
Bpu14I	TTCGAA	1 cut(s)	205
BpuEI	CTTGAG	1 cut(s)	799
BpuMI	CCSGG	1 cut(s)	232
BsaHI	GRCGYC	3 cut(s)	306, 1035, 1092
BsaJI	CCNNGG	5 cut(s)	176, 188, 248, 1017, 1165
BsaWI	WCCGGW	2 cut(s)	163, 640
BsaXI	ACNNNNNCTCC	4 cut(s)	406, 436, 889, 919
Bsc4I	CCNNNNNNNGG	2 cut(s)	193, 1137
Bse118I	RCCGGY	1 cut(s)	667
Bse1I	ACTGG	3 cut(s)	26, 326, 922
Bse21I	CCTNAGG	1 cut(s)	609
BseAI	TCCGGA	1 cut(s)	163
BseDI	CCNNGG	5 cut(s)	176, 188, 248, 1017, 1165
BseGI	GGATG	3 cut(s)	240, 581, 813
BseLI	CCNNNNNNNGG	2 cut(s)	193, 1137
BseMII	CTCAG	2 cut(s)	290, 600
BseNI	ACTGG	3 cut(s)	26, 326, 922
BseRI	GAGGAG	1 cut(s)	499
BseX3I	CGGCCG	1 cut(s)	191
BseXI	GCAGC	8 cut(s)	76, 379, 397, 400, 406, 484, 487, 1039
Bsh1236I	CGCG	2 cut(s)	178, 722
Bsh1285I	CGRYCG	2 cut(s)	194, 564
BshFI	GGCC	6 cut(s)	25, 193, 491, 667, 763, 812
BshNI	GGYRCC	1 cut(s)	920
BsiEI	CGRYCG	2 cut(s)	194, 564
BsiHKAI	GWGCWC	2 cut(s)	277, 720
BsiSI	CCGG	5 cut(s)	164, 194, 231, 641, 668
BslFI	GGGAC	3 cut(s)	266, 732, 1071
BslI	CCNNNNNNNGG	2 cut(s)	193, 1137
BsmAI	GTCTC	1 cut(s)	1080
BsmBI	CGTCTC	1 cut(s)	1080
BsmFI	GGGAC	3 cut(s)	266, 732, 1071
BsmI	GAATGC	1 cut(s)	1040
BsnI	GGCC	6 cut(s)	25, 193, 491, 667, 763, 812
Bsp119I	TTCGAA	1 cut(s)	205
Bsp1286I	GDGCHC	2 cut(s)	277, 720
Bsp13I	TCCGGA	1 cut(s)	163
Bsp143I	GATC	5 cut(s)	151, 267, 452, 751, 832
Bsp1720I	GCTNAGC	1 cut(s)	276
Bsp19I	CCATGG	1 cut(s)	1017
Bsp68I	TCGCGA	1 cut(s)	722
BspACI	CCGC	6 cut(s)	176, 178, 564, 998, 1007, 1055
BspANI	GGCC	6 cut(s)	25, 193, 491, 667, 763, 812
BspCNI	CTCAG	2 cut(s)	289, 601
BspEI	TCCGGA	1 cut(s)	163
BspFNI	CGCG	2 cut(s)	178, 722
BspHI	TCATGA	1 cut(s)	535
BspLI	GGNNCC	6 cut(s)	168, 185, 326, 922, 1059, 1060
BspMAI	CTGCAG	1 cut(s)	369
BspPI	GGATC	1 cut(s)	447
BspQI	GCTCTTC	1 cut(s)	603
BspT104I	TTCGAA	1 cut(s)	205
BspT107I	GGYRCC	1 cut(s)	920
BsrBI	CCGCTC	1 cut(s)	998
BsrFI	RCCGGY	1 cut(s)	667
BsrI	ACTGG	3 cut(s)	26, 326, 922
BssAI	RCCGGY	1 cut(s)	667
BssECI	CCNNGG	5 cut(s)	176, 188, 248, 1017, 1165
BssMI	GATC	5 cut(s)	151, 267, 452, 751, 832
BssNI	GRCGYC	3 cut(s)	306, 1035, 1092
BssT1I	CCWWGG	1 cut(s)	1017
Bst4CI	ACNGT	2 cut(s)	101, 293
Bst6I	CTCTTC	3 cut(s)	603, 1114, 1164
BstACI	GRCGYC	3 cut(s)	306, 1035, 1092
BstBI	TTCGAA	1 cut(s)	205
BstC8I	GCNNGC	2 cut(s)	365, 720
BstDEI	CTNAG	3 cut(s)	276, 609, 782
BstDSI	CCRYGG	3 cut(s)	176, 1017, 1165
BstEII	GGTNACC	1 cut(s)	1115
BstF5I	GGATG	3 cut(s)	240, 581, 813
BstFNI	CGCG	2 cut(s)	178, 722
BstH2I	RGCGCY	1 cut(s)	894
BstHHI	GCGC	2 cut(s)	893, 1172
BstKTI	GATC	5 cut(s)	154, 270, 455, 754, 835
BstMAI	GTCTC	1 cut(s)	1080
BstMBI	GATC	5 cut(s)	151, 267, 452, 751, 832
BstMCI	CGRYCG	2 cut(s)	194, 564
BstMWI	GCNNNNNNNGC	4 cut(s)	175, 364, 874, 1004
BstNSI	RCATGY	2 cut(s)	34, 524
BstPI	GGTNACC	1 cut(s)	1115
BstSCI	CCNGG	1 cut(s)	230
BstSFI	CTRYAG	1 cut(s)	365
BstUI	CGCG	2 cut(s)	178, 722
BstV1I	GCAGC	8 cut(s)	76, 379, 397, 400, 406, 484, 487, 1039
BstV2I	GAAGAC	1 cut(s)	307
BstX2I	RGATCY	1 cut(s)	452
BstYI	RGATCY	1 cut(s)	452
BstZI	CGGCCG	1 cut(s)	191
Bsu36I	CCTNAGG	1 cut(s)	609
BsuRI	GGCC	6 cut(s)	25, 193, 491, 667, 763, 812
BtgI	CCRYGG	3 cut(s)	176, 1017, 1165
BtsCI	GGATG	3 cut(s)	240, 581, 813
BtsIMutI	CAGTG	2 cut(s)	19, 410
BtuMI	TCGCGA	1 cut(s)	722
Cac8I	GCNNGC	2 cut(s)	365, 720
CaiI	CAGNNNCTG	1 cut(s)	21
CciI	TCATGA	1 cut(s)	535
CfoI	GCGC	2 cut(s)	893, 1172
Cfr10I	RCCGGY	1 cut(s)	667
Cfr13I	GGNCC	5 cut(s)	345, 665, 761, 859, 1058
Cfr42I	CCGCGG	1 cut(s)	179
CseI	GACGC	2 cut(s)	314, 1100
Csp6I	GTAC	3 cut(s)	289, 690, 768
CviQI	GTAC	3 cut(s)	289, 690, 768
DdeI	CTNAG	3 cut(s)	276, 609, 782
DpnI	GATC	5 cut(s)	153, 269, 454, 753, 834
DpnII	GATC	5 cut(s)	151, 267, 452, 751, 832
DrdI	GACNNNNNNGTC	2 cut(s)	311, 1094
DseDI	GACNNNNNNGTC	2 cut(s)	311, 1094
EaeI	YGGCCR	1 cut(s)	191
EagI	CGGCCG	1 cut(s)	191
Eam1104I	CTCTTC	3 cut(s)	603, 1114, 1164
EarI	CTCTTC	3 cut(s)	603, 1114, 1164
Ecl136II	GAGCTC	2 cut(s)	275, 718
EclXI	CGGCCG	1 cut(s)	191
Eco130I	CCWWGG	1 cut(s)	1017
Eco147I	AGGCCT	1 cut(s)	491
Eco24I	GRGCYC	2 cut(s)	277, 720
Eco47I	GGWCC	3 cut(s)	345, 859, 1058
Eco52I	CGGCCG	1 cut(s)	191
Eco53kI	GAGCTC	2 cut(s)	275, 718
Eco81I	CCTNAGG	1 cut(s)	609
Eco91I	GGTNACC	1 cut(s)	1115
EcoICRI	GAGCTC	2 cut(s)	275, 718
EcoO109I	RGGNCCY	1 cut(s)	1058
EcoO65I	GGTNACC	1 cut(s)	1115
EcoRI	GAATTC	1 cut(s)	207
EcoT14I	CCWWGG	1 cut(s)	1017
EcoT38I	GRGCYC	2 cut(s)	277, 720
ErhI	CCWWGG	1 cut(s)	1017
Esp3I	CGTCTC	1 cut(s)	1080
FaqI	GGGAC	3 cut(s)	266, 732, 1071
FauI	CCCGC	2 cut(s)	991, 1048
FokI	GGATG	3 cut(s)	247, 568, 820
FriOI	GRGCYC	2 cut(s)	277, 720
FspBI	CTAG	4 cut(s)	27, 675, 681, 771
GlaI	GCGC	2 cut(s)	892, 1171
HaeII	RGCGCY	1 cut(s)	894
HaeIII	GGCC	6 cut(s)	25, 193, 491, 667, 763, 812
HapII	CCGG	5 cut(s)	164, 194, 231, 641, 668
HgaI	GACGC	2 cut(s)	314, 1100
HhaI	GCGC	2 cut(s)	893, 1172
Hin1I	GRCGYC	3 cut(s)	306, 1035, 1092
Hin6I	GCGC	2 cut(s)	891, 1170
HinP1I	GCGC	2 cut(s)	891, 1170
HincII	GTYRAC	1 cut(s)	928
HindII	GTYRAC	1 cut(s)	928
HindIII	AAGCTT	1 cut(s)	356
HinfI	GANTC	5 cut(s)	160, 202, 241, 623, 952
HpaI	GTTAAC	1 cut(s)	928
HpaII	CCGG	5 cut(s)	164, 194, 231, 641, 668
Hpy166II	GTNNAC	2 cut(s)	646, 928
Hpy188I	TCNGA	7 cut(s)	151, 249, 272, 448, 579, 715, 1085
Hpy188III	TCNNGA	9 cut(s)	164, 212, 328, 536, 721, 749, 830, 836, 853
Hpy8I	GTNNAC	2 cut(s)	646, 928
Hpy99I	CGWCG	3 cut(s)	1037, 1040, 1094
HpyAV	CCTTC	6 cut(s)	435, 502, 663, 838, 1072, 1160
HpyCH4III	ACNGT	2 cut(s)	101, 293
HpyCH4IV	ACGT	4 cut(s)	72, 930, 1035, 1068
HpyCH4V	TGCA	2 cut(s)	367, 868
HpyF10VI	GCNNNNNNNGC	4 cut(s)	175, 364, 874, 1004
HpyF3I	CTNAG	3 cut(s)	276, 609, 782
HpySE526I	ACGT	4 cut(s)	72, 930, 1035, 1068
Hsp92I	GRCGYC	3 cut(s)	306, 1035, 1092
HspAI	GCGC	2 cut(s)	891, 1170
KflI	GGGWCCC	1 cut(s)	1058
Kpn2I	TCCGGA	1 cut(s)	163
KspAI	GTTAAC	1 cut(s)	928
KspI	CCGCGG	1 cut(s)	179
Kzo9I	GATC	5 cut(s)	151, 267, 452, 751, 832
LguI	GCTCTTC	1 cut(s)	603
LmnI	GCTCC	5 cut(s)	166, 196, 285, 427, 995
Lsp1109I	GCAGC	8 cut(s)	76, 379, 397, 400, 406, 484, 487, 1039
LweI	GCATC	1 cut(s)	858
MaeI	CTAG	4 cut(s)	27, 675, 681, 771
MaeII	ACGT	4 cut(s)	72, 930, 1035, 1068
MaeIII	GTNAC	5 cut(s)	302, 526, 895, 1115, 1144
MalI	GATC	5 cut(s)	153, 269, 454, 753, 834
MbiI	CCGCTC	1 cut(s)	998
MboI	GATC	5 cut(s)	151, 267, 452, 751, 832
MflI	RGATCY	1 cut(s)	452
MhlI	GDGCHC	2 cut(s)	277, 720
MluCI	AATT	2 cut(s)	207, 880
MlyI	GAGTC	2 cut(s)	154, 946
MmeI	TCCRAC	2 cut(s)	570, 932
MroI	TCCGGA	1 cut(s)	163
MseI	TTAA	3 cut(s)	375, 552, 927
MslI	CAYNNNNRTG	1 cut(s)	854
MspA1I	CMGCKG	1 cut(s)	178
MspI	CCGG	5 cut(s)	164, 194, 231, 641, 668
MspR9I	CCNGG	1 cut(s)	232
Mva1269I	GAATGC	1 cut(s)	1040
MvnI	CGCG	2 cut(s)	178, 722
MwoI	GCNNNNNNNGC	4 cut(s)	175, 364, 874, 1004
NciI	CCSGG	1 cut(s)	232
NcoI	CCATGG	1 cut(s)	1017
NdeII	GATC	5 cut(s)	151, 267, 452, 751, 832
NlaIV	GGNNCC	6 cut(s)	168, 185, 326, 922, 1059, 1060
NmeAIII	GCCGAG	1 cut(s)	169
NmuCI	GTSAC	3 cut(s)	302, 895, 1115
NruI	TCGCGA	1 cut(s)	722
NspI	RCATGY	2 cut(s)	34, 524
NspV	TTCGAA	1 cut(s)	205
PagI	TCATGA	1 cut(s)	535
PceI	AGGCCT	1 cut(s)	491
PciI	ACATGT	1 cut(s)	520
PciSI	GCTCTTC	1 cut(s)	603
PcsI	WCGNNNNNNNCGW	1 cut(s)	1041
PctI	GAATGC	1 cut(s)	1040
PfeI	GAWTC	3 cut(s)	202, 241, 623
PflFI	GACNNNGTC	1 cut(s)	1094
PflMI	CCANNNNNTGG	1 cut(s)	1137
PfoI	TCCNGGA	1 cut(s)	230
PleI	GAGTC	2 cut(s)	154, 946
PpsI	GAGTC	2 cut(s)	154, 946
PpuMI	RGGWCCY	1 cut(s)	1058
PscI	ACATGT	1 cut(s)	520
Psp124BI	GAGCTC	2 cut(s)	277, 720
Psp1406I	AACGTT	1 cut(s)	930
Psp5II	RGGWCCY	1 cut(s)	1058
PspEI	GGTNACC	1 cut(s)	1115
PspN4I	GGNNCC	6 cut(s)	168, 185, 326, 922, 1059, 1060
PspPI	GGNCC	5 cut(s)	345, 665, 761, 859, 1058
PspPPI	RGGWCCY	1 cut(s)	1058
PstI	CTGCAG	1 cut(s)	369
PstNI	CAGNNNCTG	1 cut(s)	21
PsuI	RGATCY	1 cut(s)	452
PsyI	GACNNNGTC	1 cut(s)	1094
RruI	TCGCGA	1 cut(s)	722
RsaI	GTAC	3 cut(s)	290, 691, 769
RsaNI	GTAC	3 cut(s)	289, 690, 768
RseI	CAYNNNNRTG	1 cut(s)	854
SacI	GAGCTC	2 cut(s)	277, 720
SacII	CCGCGG	1 cut(s)	179
SapI	GCTCTTC	1 cut(s)	603
SaqAI	TTAA	3 cut(s)	375, 552, 927
Sau3AI	GATC	5 cut(s)	151, 267, 452, 751, 832
Sau96I	GGNCC	5 cut(s)	345, 665, 761, 859, 1058
ScaI	AGTACT	1 cut(s)	691
SchI	GAGTC	2 cut(s)	154, 946
ScrFI	CCNGG	1 cut(s)	232
SduI	GDGCHC	2 cut(s)	277, 720
SfaNI	GCATC	1 cut(s)	858
SfcI	CTRYAG	1 cut(s)	365
Sfr303I	CCGCGG	1 cut(s)	179
SfuI	TTCGAA	1 cut(s)	205
SgrBI	CCGCGG	1 cut(s)	179
SinI	GGWCC	3 cut(s)	345, 859, 1058
SmiMI	CAYNNNNRTG	1 cut(s)	854
SmlI	CTYRAG	1 cut(s)	814
SmoI	CTYRAG	1 cut(s)	814
SpeI	ACTAGT	1 cut(s)	770
Sse9I	AATT	2 cut(s)	207, 880
SseBI	AGGCCT	1 cut(s)	491
SsiI	CCGC	6 cut(s)	176, 178, 564, 998, 1007, 1055
SspMI	CTAG	4 cut(s)	27, 675, 681, 771
SstI	GAGCTC	2 cut(s)	277, 720
StuI	AGGCCT	1 cut(s)	491
StyD4I	CCNGG	1 cut(s)	230
StyI	CCWWGG	1 cut(s)	1017
TaaI	ACNGT	2 cut(s)	101, 293
TaiI	ACGT	4 cut(s)	75, 933, 1038, 1071
TaqI	TCGA	2 cut(s)	205, 1044
TaqII	GACCGA	1 cut(s)	559
TasI	AATT	2 cut(s)	207, 880
TatI	WGTACW	2 cut(s)	689, 767
TauI	GCSGC	2 cut(s)	178, 1010
TfiI	GAWTC	3 cut(s)	202, 241, 623
Tru1I	TTAA	3 cut(s)	375, 552, 927
Tru9I	TTAA	3 cut(s)	375, 552, 927
TscAI	CASTG	2 cut(s)	26, 417
TseFI	GTSAC	3 cut(s)	302, 895, 1115
TseI	GCWGC	8 cut(s)	64, 367, 385, 388, 419, 472, 475, 1052
Tsp45I	GTSAC	3 cut(s)	302, 895, 1115
TspDTI	ATGAA	8 cut(s)	93, 417, 429, 722, 746, 809, 857, 1015
TspRI	CASTG	2 cut(s)	26, 417
Tth111I	GACNNNGTC	1 cut(s)	1094
Van91I	CCANNNNNTGG	1 cut(s)	1137
VpaK11BI	GGWCC	3 cut(s)	345, 859, 1058
XapI	RAATTY	1 cut(s)	207
XceI	RCATGY	2 cut(s)	34, 524
XcmI	CCANNNNNNNNNTGG	1 cut(s)	177
XspI	CTAG	4 cut(s)	27, 675, 681, 771
ZraI	GACGTC	1 cut(s)	1036
ZrmI	AGTACT	1 cut(s)	691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.