Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007871

Physical Location & Seq

Genomic Coordinates Forward (+)

2737243 .. 2742085

Gene Structure 4843 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00079770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGTTGCCTGTTGAATCTGCAAAGAAGAAGCTATCTTTCACAAGATGTATTCAAGATGGGGATTTGGTTATTGTGTATGAGAGATATGATAACATGAAGGCTGTTAAAGTGTGTGAGGGTTCTGTGCTTGAGAATCGGTTTGGCGTGTTTAAGCATTCGGATTGGATAGGGAAGCAATTTGGGTCCAAGGTTTTCAGCAGCAAAGGTGGATTTGTTTACTTGTTGGCTCCGACTCCAGAGCTTTGGACTTTGGTTCTGAGTCACAGGACGCAGATTCTCTACATTGCTGATATTAGCTTTGTGATCATGTTCTTGGAGATAGTTCCTGGCTGTGTGGTTCTGGAGTCGGGGACTGGAAGTGGGTCTTTAACTACATCGCTTGCAAGGGCTGTAGCTCCTAAGGGACATGTGTATACATTTGATTTCCATGAGCAAAGGGCTGCCTCGGCTAGGGAGGACTTTGAAAAGACAGGGATTAGCAACACGGTCACAGTAGGAGTTAGAGATATTCAGGGTGAAGGTTTTCCAGATGAGTTTTCTGGGAGGGCAGATTCTGTCTTCCTGGACCTTCCCCAACCCTGGCTAGCCATCCCTTCAGTTGAGAAAATGTTAAAACAAGATGGGATTGTATGCTCCTTTTCCCCGTGCATTGAGCAGGTGCAACGAGCATCTGAGACTTTGAGATCAAAGTTTACAGATATAAGGACATTTGAGATACTCCTTCGCACATATGAAGTTCGAGAAGGGAAAACAGATAGCTTCCAGGTCGAGGAAAGCGGTTCTGTTGGATCTCTACCATCAATAGAGATGCAGAGCAGTGCCATTGCTCTGTCTCCTTCCACCCCATTTCTAAAACCACCATGTCGAATCCCGAGCTGTAAACTCTCTCAACTTTCAGCCTCAACTTGTTTTACACAACTTTGCCGTATCAGTTCTATTCAGAGACTTTACTGGCAAACAGCTTTTGGCACGTTTTCTACTTCTTCCTCTTTCAATGCTGAAATCCCTGCCTCCTTCCTTTCCTCAAACCGAAGTTATGATAGTTTGAAGGTCGGGGCTGCTCAGGCTGCTGCTCCGGGGCCAGAGAGTGCCGGGGAGGCTTCAGAATCAAGTGGATTGGCTCGAACTTTGCAGCTCGGTGCCATGTTTGGAATTTGCCACGGTTACAGCCTTTCAGTTTGCCTGTGGGACTGTCATGATTATCCTGATGTGGGCTCTAAACCTCTACCCCAGACCGAAGATCACTCGCTCACAGCAATTCTACCACTGGCTGTGGCGCACACGATGGGAAACCTATTGACCAACGTCAGTATCGGGAAAGTTGCTGTTTCATTCACTCACACGATCAAAGCTATGGAGCCCTTCTTCACTGTCCTATTCTCAGCCCTCTTGCTTGCAGAGGAATCTTTGGACAATATCAATCTCTTCTCAGTGATAACCATCATTTCTTTCATACTGTTGCTTCCTTCTGCTATTCTCTTGGAAGGCGTTAAATTTAGTCCTTCATACCTGCAATCTGCTGCAAACCAAGGATTGAACATCAAAGAGTTGTGTGTGAGATCACTTCTGGCTGGTTTCTGCTTCCACACTTACCAGCAGGTCTCGTATATGATACTGCAGATGGTATCACCAGTCACACATGCAGTAGGGAACTGTGTGAAGCGAATGGTGGTCATAGTCTCCTCAGTCATCTTCTTCCAAACACCGGTCTCACCCATAAATTCCCTCGGAACTGCTATGGCTCTTGCCGGAGTCTTCTTATATTCAAGAGCCAAGAGAATTAAGCCAAAGCCCAAGGCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001510 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008174 GO:0008757 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016740 GO:0016741 GO:0031515 GO:0032259 GO:0032991 GO:0034641 GO:0034708 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043527 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0061953 GO:0071704 GO:0080009 GO:0090304 GO:0140098 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GCD14

Protein Analysis

601

Amino Acids

65.46

Weight (kDa)

7.12

Isoelectric Point (pI)

41.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCD14	PF08704	70 - 255	3.2e-88	tRNA methyltransferase complex GCD14 subunit
Methyltransf_31	PF13847	109 - 231	4.2e-10	Methyltransferase domain
Methyltransf_25	PF13649	113 - 188	8e-06	Methyltransferase domain
TPT	PF03151	405 - 467	9.9e-20	Triose-phosphate Transporter family
TPT	PF03151	468 - 589	1.3e-42	Triose-phosphate Transporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007871)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14600
fragaria_vesca	FvH4_6g51011 FvH4_6g51011 FvH4_6g51011
malus_domestica	MD09G1029500.v1.1 MD17G1031500.v1.1
prunus_persica	Prupe.3G287900_v2.0.a1
pyrus_communis	pycom111g02350 pycom17g02900
rosa_chinensis	RchiOBHm_Chr2g0172551
rosa_laevigata	RLG00000002839 RLG00000016014 RLG00000021671 RLG00000022115
rosa_multiflora	Rmu_sc0000912.1_g000006
rosa_roxburghii	Rroxscaffold_2G00079770
rosa_rugosa	Rorug02G0559800
rosa_samantha	Rh2AG635900 Rh2BG649300 Rh2CG616100 Rh2DG663700 Rh3AG202500 Rh3DG228000
rosa_wichuraiana	Rw2G052610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	646
Acc36I	ACCTGC	3 cut(s)	646, 1518, 1588
AccB1I	GGYRCC	1 cut(s)	1139
AccI	GTMKAC	1 cut(s)	413
AciI	CCGC	1 cut(s)	777
AclWI	GGATC	1 cut(s)	796
AcsI	RAATTY	3 cut(s)	1152, 1493, 1720
AcuI	CTGAAG	2 cut(s)	579, 1086
AfiI	CCNNNNNNNGG	5 cut(s)	450, 579, 769, 1211, 1705
AflIII	ACRYGT	1 cut(s)	406
AgeI	ACCGGT	1 cut(s)	1705
AgsI	TTSAA	7 cut(s)	14, 53, 464, 994, 1048, 1537, 1767
AjnI	CCWGG	4 cut(s)	325, 561, 578, 762
AluBI	AGCT	9 cut(s)	31, 241, 297, 395, 759, 876, 962, 1135, 1352
AluI	AGCT	9 cut(s)	31, 241, 297, 395, 759, 876, 962, 1135, 1352
Alw26I	GTCTC	6 cut(s)	668, 837, 937, 1606, 1684, 1714
AlwI	GGATC	1 cut(s)	796
AlwNI	CAGNNNCTG	1 cut(s)	554
Ama87I	CYCGRG	1 cut(s)	871
AoxI	GGCC	1 cut(s)	1079
ApeKI	GCWGC	8 cut(s)	198, 440, 1058, 1067, 1070, 1132, 1520, 1799
ApoI	RAATTY	3 cut(s)	1152, 1493, 1720
AsiGI	ACCGGT	1 cut(s)	1705
Asp700I	GAANNNNTTC	1 cut(s)	522
AspLEI	GCGC	1 cut(s)	1279
AspS9I	GGNCC	3 cut(s)	183, 565, 1079
AsuC2I	CCSGG	2 cut(s)	1077, 1093
AsuHPI	GGTGA	3 cut(s)	527, 1620, 1704
AsuNHI	GCTAGC	1 cut(s)	583
AvaI	CYCGRG	1 cut(s)	871
AvaII	GGWCC	2 cut(s)	183, 565
AxyI	CCTNAGG	1 cut(s)	399
BaeI	ACNNNNGTAYC	2 cut(s)	1294, 1327
BanI	GGYRCC	1 cut(s)	1139
BanII	GRGCYC	2 cut(s)	1217, 1362
BbsI	GAAGAC	2 cut(s)	550, 1747
BbvI	GCAGC	8 cut(s)	210, 427, 1045, 1054, 1057, 1144, 1507, 1786
BccI	CCATC	7 cut(s)	50, 596, 614, 805, 1279, 1448, 1615
BceAI	ACGGC	1 cut(s)	909
BciT130I	CCWGG	4 cut(s)	327, 563, 580, 764
BclI	TGATCA	1 cut(s)	303
BcnI	CCSGG	2 cut(s)	1077, 1093
BcoDI	GTCTC	6 cut(s)	668, 837, 937, 1606, 1684, 1714
BfaI	CTAG	2 cut(s)	450, 584
BfmI	CTRYAG	2 cut(s)	390, 1616
BfuAI	ACCTGC	3 cut(s)	646, 1518, 1588
BglI	GCCNNNNNGGC	1 cut(s)	1097
BisI	GCNGC	8 cut(s)	199, 441, 1059, 1068, 1071, 1133, 1521, 1800
BlsI	GCNGC	8 cut(s)	200, 442, 1060, 1069, 1072, 1134, 1522, 1801
Bme1390I	CCNGG	6 cut(s)	327, 563, 580, 764, 1077, 1093
Bme18I	GGWCC	2 cut(s)	183, 565
BmeT110I	CYCGRG	1 cut(s)	871
BmgT120I	GGNCC	3 cut(s)	183, 565, 1079
BmiI	GGNNCC	5 cut(s)	184, 228, 1080, 1141, 1359
BmrFI	CCNGG	6 cut(s)	327, 563, 580, 764, 1077, 1093
BmsI	GCATC	2 cut(s)	677, 798
BmtI	GCTAGC	1 cut(s)	587
BoxI	GACNNNNGTC	1 cut(s)	1304
BpiI	GAAGAC	2 cut(s)	550, 1747
BpmI	CTGGAG	2 cut(s)	219, 362
Bpu10I	CCTNAGC	1 cut(s)	1062
BpuEI	CTTGAG	1 cut(s)	149
BpuMI	CCSGG	2 cut(s)	1077, 1093
BsaBI	GATNNNNATC	1 cut(s)	1439
BsaI	GGTCTC	2 cut(s)	1606, 1714
BsaJI	CCNNGG	9 cut(s)	186, 444, 578, 1076, 1092, 1159, 1528, 1726, 1794
BsaWI	WCCGGW	1 cut(s)	1705
Bsc4I	CCNNNNNNNGG	5 cut(s)	450, 579, 769, 1211, 1705
Bse118I	RCCGGY	1 cut(s)	1705
Bse1I	ACTGG	4 cut(s)	358, 956, 1272, 1631
Bse21I	CCTNAGG	1 cut(s)	399
Bse3DI	GCAATG	2 cut(s)	282, 822
Bse8I	GATNNNNATC	1 cut(s)	1439
BseBI	CCWGG	4 cut(s)	327, 563, 580, 764
BseDI	CCNNGG	9 cut(s)	186, 444, 578, 1076, 1092, 1159, 1528, 1726, 1794
BseGI	GGATG	1 cut(s)	588
BseJI	GATNNNNATC	1 cut(s)	1439
BseLI	CCNNNNNNNGG	5 cut(s)	450, 579, 769, 1211, 1705
BseMI	GCAATG	2 cut(s)	282, 822
BseMII	CTCAG	6 cut(s)	248, 663, 1076, 1395, 1443, 1698
BseNI	ACTGG	4 cut(s)	358, 956, 1272, 1631
BseRI	GAGGAG	1 cut(s)	1672
BseXI	GCAGC	8 cut(s)	210, 427, 1045, 1054, 1057, 1144, 1507, 1786
BshFI	GGCC	1 cut(s)	1081
BshNI	GGYRCC	1 cut(s)	1139
BshTI	ACCGGT	1 cut(s)	1705
BsiHKCI	CYCGRG	1 cut(s)	871
BsiSI	CCGG	4 cut(s)	1076, 1092, 1706, 1749
BslFI	GGGAC	3 cut(s)	364, 417, 1202
BslI	CCNNNNNNNGG	5 cut(s)	450, 579, 769, 1211, 1705
BsmAI	GTCTC	6 cut(s)	668, 837, 937, 1606, 1684, 1714
BsmFI	GGGAC	3 cut(s)	364, 417, 1202
BsmI	GAATGC	1 cut(s)	154
BsnI	GGCC	1 cut(s)	1081
Bso31I	GGTCTC	2 cut(s)	1606, 1714
BsoBI	CYCGRG	1 cut(s)	871
Bsp1286I	GDGCHC	2 cut(s)	1217, 1362
Bsp143I	GATC	6 cut(s)	303, 683, 788, 1240, 1344, 1559
BspACI	CCGC	1 cut(s)	777
BspANI	GGCC	1 cut(s)	1081
BspCNI	CTCAG	6 cut(s)	249, 664, 1075, 1394, 1442, 1697
BspHI	TCATGA	1 cut(s)	1195
BspLI	GGNNCC	5 cut(s)	184, 228, 1080, 1141, 1359
BspMAI	CTGCAG	1 cut(s)	1620
BspMI	ACCTGC	3 cut(s)	646, 1518, 1588
BspOI	GCTAGC	1 cut(s)	587
BspPI	GGATC	1 cut(s)	796
BspT107I	GGYRCC	1 cut(s)	1139
BspTNI	GGTCTC	2 cut(s)	1606, 1714
BsrDI	GCAATG	2 cut(s)	282, 822
BsrFI	RCCGGY	1 cut(s)	1705
BsrI	ACTGG	4 cut(s)	358, 956, 1272, 1631
BssAI	RCCGGY	1 cut(s)	1705
BssECI	CCNNGG	9 cut(s)	186, 444, 578, 1076, 1092, 1159, 1528, 1726, 1794
BssMI	GATC	6 cut(s)	303, 683, 788, 1240, 1344, 1559
BssNAI	GTATAC	1 cut(s)	414
BssT1I	CCWWGG	3 cut(s)	186, 1528, 1794
Bst1107I	GTATAC	1 cut(s)	414
Bst2UI	CCWGG	4 cut(s)	327, 563, 580, 764
Bst4CI	ACNGT	7 cut(s)	487, 493, 1163, 1193, 1372, 1458, 1655
Bst6I	CTCTTC	1 cut(s)	1430
BstC8I	GCNNGC	3 cut(s)	381, 585, 1395
BstDEI	CTNAG	7 cut(s)	257, 399, 672, 1062, 1381, 1429, 1684
BstDSI	CCRYGG	1 cut(s)	1159
BstENI	CCTNNNNNAGG	1 cut(s)	448
BstF5I	GGATG	1 cut(s)	588
BstHHI	GCGC	1 cut(s)	1279
BstKTI	GATC	6 cut(s)	306, 686, 791, 1243, 1347, 1562
BstMAI	GTCTC	6 cut(s)	668, 837, 937, 1606, 1684, 1714
BstMBI	GATC	6 cut(s)	303, 683, 788, 1240, 1344, 1559
BstMWI	GCNNNNNNNGC	4 cut(s)	446, 1064, 1067, 1097
BstNI	CCWGG	4 cut(s)	327, 563, 580, 764
BstNSI	RCATGY	2 cut(s)	410, 1643
BstPAI	GACNNNNGTC	1 cut(s)	1304
BstSCI	CCNGG	6 cut(s)	325, 561, 578, 762, 1075, 1091
BstSFI	CTRYAG	2 cut(s)	390, 1616
BstV1I	GCAGC	8 cut(s)	210, 427, 1045, 1054, 1057, 1144, 1507, 1786
BstV2I	GAAGAC	2 cut(s)	550, 1747
BstX2I	RGATCY	1 cut(s)	788
BstXI	CCANNNNNNTGG	1 cut(s)	243
BstYI	RGATCY	1 cut(s)	788
BstZ17I	GTATAC	1 cut(s)	414
Bsu36I	CCTNAGG	1 cut(s)	399
BsuRI	GGCC	1 cut(s)	1081
BtgI	CCRYGG	1 cut(s)	1159
BtgZI	GCGATG	1 cut(s)	360
BtsCI	GGATG	1 cut(s)	588
BtsI	GCAGTG	1 cut(s)	823
BtsIMutI	CAGTG	4 cut(s)	823, 1265, 1368, 1437
BveI	ACCTGC	3 cut(s)	646, 1518, 1588
Cac8I	GCNNGC	3 cut(s)	381, 585, 1395
CaiI	CAGNNNCTG	1 cut(s)	554
CciI	TCATGA	1 cut(s)	1195
CfoI	GCGC	1 cut(s)	1279
Cfr10I	RCCGGY	1 cut(s)	1705
Cfr13I	GGNCC	3 cut(s)	183, 565, 1079
CseI	GACGC	1 cut(s)	277
CspAI	ACCGGT	1 cut(s)	1705
CviAII	CATG	8 cut(s)	94, 307, 407, 428, 861, 1144, 1196, 1640
DdeI	CTNAG	7 cut(s)	257, 399, 672, 1062, 1381, 1429, 1684
DpnI	GATC	6 cut(s)	305, 685, 790, 1242, 1346, 1561
DpnII	GATC	6 cut(s)	303, 683, 788, 1240, 1344, 1559
Eam1104I	CTCTTC	1 cut(s)	1430
EarI	CTCTTC	1 cut(s)	1430
Eco130I	CCWWGG	3 cut(s)	186, 1528, 1794
Eco24I	GRGCYC	2 cut(s)	1217, 1362
Eco31I	GGTCTC	2 cut(s)	1606, 1714
Eco47I	GGWCC	2 cut(s)	183, 565
Eco57I	CTGAAG	2 cut(s)	579, 1086
Eco81I	CCTNAGG	1 cut(s)	399
Eco88I	CYCGRG	1 cut(s)	871
EcoNI	CCTNNNNNAGG	1 cut(s)	448
EcoRII	CCWGG	4 cut(s)	325, 561, 578, 762
EcoT14I	CCWWGG	3 cut(s)	186, 1528, 1794
EcoT38I	GRGCYC	2 cut(s)	1217, 1362
ErhI	CCWWGG	3 cut(s)	186, 1528, 1794
FaeI	CATG	8 cut(s)	97, 310, 410, 431, 864, 1147, 1199, 1643
FalI	AAGNNNNNCTT	2 cut(s)	349, 381
FaqI	GGGAC	3 cut(s)	364, 417, 1202
FatI	CATG	8 cut(s)	93, 306, 406, 427, 860, 1143, 1195, 1639
FauNDI	CATATG	1 cut(s)	730
FbaI	TGATCA	1 cut(s)	303
FblI	GTMKAC	1 cut(s)	413
Fnu4HI	GCNGC	8 cut(s)	199, 441, 1059, 1068, 1071, 1133, 1521, 1800
FokI	GGATG	1 cut(s)	575
FriOI	GRGCYC	2 cut(s)	1217, 1362
Fsp4HI	GCNGC	8 cut(s)	199, 441, 1059, 1068, 1071, 1133, 1521, 1800
FspBI	CTAG	2 cut(s)	450, 584
GlaI	GCGC	1 cut(s)	1278
GluI	GCNGC	8 cut(s)	199, 441, 1059, 1068, 1071, 1133, 1521, 1800
GsuI	CTGGAG	2 cut(s)	219, 362
HaeIII	GGCC	1 cut(s)	1081
HapII	CCGG	4 cut(s)	1076, 1092, 1706, 1749
HgaI	GACGC	1 cut(s)	277
HhaI	GCGC	1 cut(s)	1279
Hin1II	CATG	8 cut(s)	97, 310, 410, 431, 864, 1147, 1199, 1643
Hin6I	GCGC	1 cut(s)	1277
HinP1I	GCGC	1 cut(s)	1277
HpaII	CCGG	4 cut(s)	1076, 1092, 1706, 1749
HphI	GGTGA	3 cut(s)	527, 1620, 1704
Hpy166II	GTNNAC	4 cut(s)	217, 414, 693, 881
Hpy188I	TCNGA	7 cut(s)	160, 231, 258, 673, 942, 1105, 1730
Hpy8I	GTNNAC	4 cut(s)	217, 414, 693, 881
HpyCH4III	ACNGT	7 cut(s)	487, 493, 1163, 1193, 1372, 1458, 1655
HpyCH4IV	ACGT	2 cut(s)	971, 1305
HpyF10VI	GCNNNNNNNGC	4 cut(s)	446, 1064, 1067, 1097
HpyF3I	CTNAG	7 cut(s)	257, 399, 672, 1062, 1381, 1429, 1684
HpySE526I	ACGT	2 cut(s)	971, 1305
Hsp92II	CATG	8 cut(s)	97, 310, 410, 431, 864, 1147, 1199, 1643
HspAI	GCGC	1 cut(s)	1277
Ksp22I	TGATCA	1 cut(s)	303
Kzo9I	GATC	6 cut(s)	303, 683, 788, 1240, 1344, 1559
LmnI	GCTCC	5 cut(s)	232, 400, 638, 1078, 1357
Lsp1109I	GCAGC	8 cut(s)	210, 427, 1045, 1054, 1057, 1144, 1507, 1786
LweI	GCATC	2 cut(s)	677, 798
MaeI	CTAG	2 cut(s)	450, 584
MaeII	ACGT	2 cut(s)	971, 1305
MaeIII	GTNAC	4 cut(s)	260, 487, 1163, 1633
MalI	GATC	6 cut(s)	305, 685, 790, 1242, 1346, 1561
MboI	GATC	6 cut(s)	303, 683, 788, 1240, 1344, 1559
MboII	GAAGA	9 cut(s)	37, 550, 975, 1250, 1357, 1417, 1684, 1687, 1747
MflI	RGATCY	1 cut(s)	788
MhlI	GDGCHC	2 cut(s)	1217, 1362
MluCI	AATT	6 cut(s)	176, 1152, 1257, 1493, 1720, 1779
MlyI	GAGTC	4 cut(s)	226, 268, 353, 1761
MmeI	TCCRAC	2 cut(s)	254, 766
MroXI	GAANNNNTTC	1 cut(s)	522
MseI	TTAA	6 cut(s)	105, 150, 368, 611, 1491, 1782
MspI	CCGG	4 cut(s)	1076, 1092, 1706, 1749
MspR9I	CCNGG	6 cut(s)	327, 563, 580, 764, 1077, 1093
Mva1269I	GAATGC	1 cut(s)	154
MvaI	CCWGG	4 cut(s)	327, 563, 580, 764
MwoI	GCNNNNNNNGC	4 cut(s)	446, 1064, 1067, 1097
NciI	CCSGG	2 cut(s)	1077, 1093
NdeI	CATATG	1 cut(s)	730
NdeII	GATC	6 cut(s)	303, 683, 788, 1240, 1344, 1559
NheI	GCTAGC	1 cut(s)	583
NlaIII	CATG	8 cut(s)	97, 310, 410, 431, 864, 1147, 1199, 1643
NlaIV	GGNNCC	5 cut(s)	184, 228, 1080, 1141, 1359
NmeAIII	GCCGAG	1 cut(s)	425
NmuCI	GTSAC	3 cut(s)	260, 487, 1633
NspI	RCATGY	2 cut(s)	410, 1643
PagI	TCATGA	1 cut(s)	1195
PaqCI	CACCTGC	1 cut(s)	646
PciI	ACATGT	1 cut(s)	406
PctI	GAATGC	1 cut(s)	154
PdmI	GAANNNNTTC	1 cut(s)	522
PfeI	GAWTC	7 cut(s)	14, 133, 274, 551, 867, 1106, 1403
PfoI	TCCNGGA	1 cut(s)	561
PinAI	ACCGGT	1 cut(s)	1705
PkrI	GCNGC	8 cut(s)	200, 442, 1060, 1069, 1072, 1134, 1522, 1801
PleI	GAGTC	4 cut(s)	226, 267, 352, 1760
PpsI	GAGTC	4 cut(s)	226, 267, 352, 1760
PscI	ACATGT	1 cut(s)	406
PshAI	GACNNNNGTC	1 cut(s)	1304
Psp6I	CCWGG	4 cut(s)	325, 561, 578, 762
PspGI	CCWGG	4 cut(s)	325, 561, 578, 762
PspN4I	GGNNCC	5 cut(s)	184, 228, 1080, 1141, 1359
PspPI	GGNCC	3 cut(s)	183, 565, 1079
PstI	CTGCAG	1 cut(s)	1620
PstNI	CAGNNNCTG	1 cut(s)	554
PsuI	RGATCY	1 cut(s)	788
SaqAI	TTAA	6 cut(s)	105, 150, 368, 611, 1491, 1782
SatI	GCNGC	8 cut(s)	199, 441, 1059, 1068, 1071, 1133, 1521, 1800
Sau3AI	GATC	6 cut(s)	303, 683, 788, 1240, 1344, 1559
Sau96I	GGNCC	3 cut(s)	183, 565, 1079
SchI	GAGTC	4 cut(s)	226, 268, 353, 1761
ScrFI	CCNGG	6 cut(s)	327, 563, 580, 764, 1077, 1093
SduI	GDGCHC	2 cut(s)	1217, 1362
SfaNI	GCATC	2 cut(s)	677, 798
SfcI	CTRYAG	2 cut(s)	390, 1616
SinI	GGWCC	2 cut(s)	183, 565
SmlI	CTYRAG	1 cut(s)	128
SmoI	CTYRAG	1 cut(s)	128
Sse9I	AATT	6 cut(s)	176, 1152, 1257, 1493, 1720, 1779
SsiI	CCGC	1 cut(s)	777
SspMI	CTAG	2 cut(s)	450, 584
StyD4I	CCNGG	6 cut(s)	325, 561, 578, 762, 1075, 1091
StyI	CCWWGG	3 cut(s)	186, 1528, 1794
TaaI	ACNGT	7 cut(s)	487, 493, 1163, 1193, 1372, 1458, 1655
TaiI	ACGT	2 cut(s)	974, 1308
TaqI	TCGA	4 cut(s)	739, 768, 865, 1123
TaqII	GACCGA	1 cut(s)	1250
TasI	AATT	6 cut(s)	176, 1152, 1257, 1493, 1720, 1779
TfiI	GAWTC	7 cut(s)	14, 133, 274, 551, 867, 1106, 1403
Tru1I	TTAA	6 cut(s)	105, 150, 368, 611, 1491, 1782
Tru9I	TTAA	6 cut(s)	105, 150, 368, 611, 1491, 1782
TscAI	CASTG	4 cut(s)	823, 1272, 1375, 1437
TseFI	GTSAC	3 cut(s)	260, 487, 1633
TseI	GCWGC	8 cut(s)	198, 440, 1058, 1067, 1070, 1132, 1520, 1799
Tsp45I	GTSAC	3 cut(s)	260, 487, 1633
TspDTI	ATGAA	5 cut(s)	110, 747, 1320, 1441, 1494
TspRI	CASTG	4 cut(s)	823, 1272, 1375, 1437
VpaK11BI	GGWCC	2 cut(s)	183, 565
XagI	CCTNNNNNAGG	1 cut(s)	448
XapI	RAATTY	3 cut(s)	1152, 1493, 1720
XceI	RCATGY	2 cut(s)	410, 1643
XmiI	GTMKAC	1 cut(s)	413
XmnI	GAANNNNTTC	1 cut(s)	522
XspI	CTAG	2 cut(s)	450, 584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.