Rroxscaffold_2G00083590

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0011588
Physical Location & Seq
Forward (+)
6273603 .. 6275370
1768 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00083590.1

Sequence Viewer

Length: 1677 bp
ATGCAACAGCAATGGCAAGCAAGCCTGAGCTCCAGGCTCGCTTCCATGGCCCAGACGTGCCTCTCCATGAAACAACTCAAGCAAATCCACGCCCGCGCAATCCTTTCAAATCTCCACAACCACACCATCGTTCTCGGCAAGATGTTCCGTTTCGCCGCAGTCTCACCCTCTGGTGACTTAAACTACGCCCACCAACTGTTCGATCAAATGCCCCAACCAACAACTTTCTTCTACAACCTCCTCATTCGGGGTCACTCCAAAAGCTCGTCGCCTTGGCATTCGGTGCTTCTATTCAACCAGATGAGACTAAACTCAATCGACCCAGATGAGTTTACCTTCACATTTTTGCTGAAATCTCGTTCGAGGATGAAGATGAATATCGAAAATGATGAGATACATGGGGCTGTGTTGAAGTCTGGGTTTTCCTTGCATTTGTTTGTGCAGAATTCGTTGATTCATTTGTATGCCGGGAGAGGGATTCCCAGTGCGGCTAGGAGAGTGTTCGACGAGGCTGTGGCTGCTGATGTTGTGTCGTGGTCGGGTTTGGTTATTGCTCATGTGAGAGCCAATGAATTGGATTTTGCACGGCGGATGTTTGATGAAATGCCTGAGAGGGATGTTGTTTCGTGGACCGCTATGATATCTGGGTATTCACAGGCTAAGTATTCGAGGGAAGCGCTTGGGTTGTTTTGGGAGATGATTCGTGAGGGAGAGAGACCCGACGAGGTCACCATGGTGAGTGTAATCGCAGCATGCACGGATTTAGGAGACGTTCAAACCGGGATAAGCATCCACCGGTTTATTGAGGAGAATGGGTTTGCGTGGATGGTTTCGCTTTGCAATGCGCTGATTGATATGTATGCAAAGTGTGGGTGCATGGATCGAGCATGGCATCTGTTTGATAGCATGAACCGGAAGAGCTTGATTACTTGGAATTCTATGATTTCAGCATGTGCAAACCATGGCAATGCTGATGATGCATTTGGGTTGTTTGAGTGTATGGTTAGTGCTGGTGTTCCACCTGATGGGGTCACATTCTTGGCCCTGTTAGTTGCTTATACACACAAGGGATTGGTAGATGAAGGGCTCAGACTATTTGAGAGAATGCAAAGGGAGTACAGAATCGAGGCTCGCATTGAGCATTATGGGTGCATGGCAGATATGTTAGGCAAGGCAGGGCGATTGGAGGAAGCATACAGATTAATTAGTAGTATGCCGATTCCAGGCAATGATGTTGTTTGGGGAACACTGCTTGCAGCTTGCAGAACTTATGGCGATGTTGATATGGGCGAGACGGTTGTAAAGAGGCTAATAGAGCTGAAACCGGATGAAGGTGGGTACTATATTCTCCTTCGTGATATTTATGTTGCAGCAGGAAGGACTGCAGAAGCAAACGATATGAGGCAAACGATGATGGATAATGGTGCTAGTAAGACTCCTGGACGCAGTTGGGATGGAAATTGGACGTACTCGGCAGCTAGAATATGTGGAAAACGGAAGACCAAGGATATCCGGATATTAAACCAAGATTCAGGACTTCACTATAAAACAGGAGAAGCAGATTCAGATTCAATGCAGAGCTGGGTCGAGTCAGAGTCTAGCCAAAGGAACAATTGCCAGGTAGAGACGTTCATCAGGCTGGAAAAGCACATTGAAGTGTCAGATGGTGTTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

558

Amino Acids

62.9

Weight (kDa)

6.12

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 73 - 118 4.8e-07 PPR repeat family
PPR_2 PF13041 205 - 252 9.3e-10 PPR repeat family
PPR PF01535 208 - 237 8e-08 PPR repeat
PPR_long PF17177 272 - 403 3.1e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 307 - 350 6.6e-10 PPR repeat family
PPR PF01535 309 - 339 1e-08 PPR repeat
E_motif PF20431 424 - 484 9.9e-11 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1025
AccII CGCG 1 cut(s) 96
AccIII TCCGGA 1 cut(s) 1512
AciI CCGC 5 cut(s) 94, 156, 488, 589, 633
AclWI GGATC 1 cut(s) 888
AcsI RAATTY 2 cut(s) 445, 934
AfaI GTAC 3 cut(s) 1118, 1340, 1469
AfeI AGCGCT 1 cut(s) 678
AfiI CCNNNNNNNGG 5 cut(s) 247, 474, 1025, 1223, 1331
AgeI ACCGGT 1 cut(s) 795
AgsI TTSAA 6 cut(s) 108, 295, 412, 776, 1572, 1655
AjiI CACGTC 1 cut(s) 57
AjnI CCWGG 4 cut(s) 32, 1222, 1438, 1617
AleI CACNNNNGTG 1 cut(s) 734
AluBI AGCT 7 cut(s) 30, 264, 921, 1259, 1318, 1478, 1581
AluI AGCT 7 cut(s) 30, 264, 921, 1259, 1318, 1478, 1581
Alw21I GWGCWC 1 cut(s) 32
Alw26I GTCTC 6 cut(s) 166, 298, 709, 762, 1286, 1619
AlwI GGATC 1 cut(s) 888
Aor13HI TCCGGA 1 cut(s) 1512
Aor51HI AGCGCT 1 cut(s) 678
AoxI GGCC 2 cut(s) 48, 1041
ApeKI GCWGC 5 cut(s) 518, 749, 1256, 1370, 1475
ApoI RAATTY 2 cut(s) 445, 934
AseI ATTAAT 1 cut(s) 1202
AsiGI ACCGGT 1 cut(s) 795
AspLEI GCGC 3 cut(s) 98, 679, 847
AspS9I GGNCC 3 cut(s) 49, 630, 1042
AsuC2I CCSGG 2 cut(s) 469, 781
AsuHPI GGTGA 4 cut(s) 156, 185, 721, 748
AvaII GGWCC 1 cut(s) 630
BanII GRGCYC 2 cut(s) 32, 1089
BbsI GAAGAC 1 cut(s) 1505
Bbv12I GWGCWC 1 cut(s) 32
BbvI GCAGC 5 cut(s) 505, 761, 1268, 1382, 1487
BccI CCATC 6 cut(s) 134, 820, 1019, 1408, 1448, 1658
BceAI ACGGC 1 cut(s) 602
BciT130I CCWGG 4 cut(s) 34, 1224, 1440, 1619
BcnI CCSGG 2 cut(s) 469, 781
BcoDI GTCTC 6 cut(s) 166, 298, 709, 762, 1286, 1619
BfaI CTAG 4 cut(s) 492, 1428, 1479, 1599
BfmI CTRYAG 1 cut(s) 1383
BfoI RGCGCY 1 cut(s) 680
BisI GCNGC 7 cut(s) 156, 489, 519, 750, 1257, 1371, 1476
BlsI GCNGC 7 cut(s) 157, 490, 520, 751, 1258, 1372, 1477
Bme1390I CCNGG 6 cut(s) 34, 469, 781, 1224, 1440, 1619
Bme18I GGWCC 1 cut(s) 630
BmgBI CACGTC 1 cut(s) 57
BmgT120I GGNCC 3 cut(s) 49, 630, 1042
BmrFI CCNGG 6 cut(s) 34, 469, 781, 1224, 1440, 1619
BmrI ACTGGG 1 cut(s) 477
BmsI GCATC 3 cut(s) 798, 901, 967
BmuI ACTGGG 1 cut(s) 477
BpiI GAAGAC 1 cut(s) 1505
BpmI CTGGAG 1 cut(s) 16
Bpu10I CCTNAGC 1 cut(s) 26
BpuEI CTTGAG 1 cut(s) 62
BpuMI CCSGG 2 cut(s) 469, 781
BsaBI GATNNNNATC 2 cut(s) 377, 788
BsaI GGTCTC 1 cut(s) 709
BsaJI CCNNGG 5 cut(s) 45, 272, 732, 961, 1503
BsaWI WCCGGW 4 cut(s) 795, 912, 1324, 1512
BsaXI ACNNNNNCTCC 2 cut(s) 800, 830
Bsc4I CCNNNNNNNGG 5 cut(s) 247, 474, 1025, 1223, 1331
Bse118I RCCGGY 1 cut(s) 795
Bse1I ACTGG 1 cut(s) 483
Bse3DI GCAATG 4 cut(s) 17, 847, 973, 1234
Bse8I GATNNNNATC 2 cut(s) 377, 788
BseAI TCCGGA 1 cut(s) 1512
BseBI CCWGG 4 cut(s) 34, 1224, 1440, 1619
BseDI CCNNGG 5 cut(s) 45, 272, 732, 961, 1503
BseGI GGATG 7 cut(s) 372, 597, 622, 789, 831, 1333, 1459
BseJI GATNNNNATC 2 cut(s) 377, 788
BseLI CCNNNNNNNGG 5 cut(s) 247, 474, 1025, 1223, 1331
BseMI GCAATG 4 cut(s) 17, 847, 973, 1234
BseMII CTCAG 3 cut(s) 17, 600, 1102
BseNI ACTGG 1 cut(s) 483
BseRI GAGGAG 2 cut(s) 230, 821
BseXI GCAGC 5 cut(s) 505, 761, 1268, 1382, 1487
BseYI CCCAGC 1 cut(s) 1581
BsgI GTGCAG 1 cut(s) 461
Bsh1236I CGCG 1 cut(s) 96
BshFI GGCC 2 cut(s) 50, 1043
BshTI ACCGGT 1 cut(s) 795
BsiHKAI GWGCWC 1 cut(s) 32
BsiSI CCGG 6 cut(s) 468, 780, 796, 913, 1325, 1513
BslI CCNNNNNNNGG 5 cut(s) 247, 474, 1025, 1223, 1331
BsmAI GTCTC 6 cut(s) 166, 298, 709, 762, 1286, 1619
BsmBI CGTCTC 3 cut(s) 762, 1286, 1619
BsmI GAATGC 2 cut(s) 277, 1110
BsnI GGCC 2 cut(s) 50, 1043
Bso31I GGTCTC 1 cut(s) 709
Bsp1286I GDGCHC 2 cut(s) 32, 1089
Bsp13I TCCGGA 1 cut(s) 1512
Bsp143I GATC 2 cut(s) 202, 880
Bsp19I CCATGG 3 cut(s) 45, 732, 961
BspACI CCGC 5 cut(s) 94, 156, 488, 589, 633
BspANI GGCC 2 cut(s) 50, 1043
BspCNI CTCAG 3 cut(s) 18, 601, 1101
BspEI TCCGGA 1 cut(s) 1512
BspFNI CGCG 1 cut(s) 96
BspMAI CTGCAG 1 cut(s) 1387
BspPI GGATC 1 cut(s) 888
BspQI GCTCTTC 1 cut(s) 911
BspTNI GGTCTC 1 cut(s) 709
BsrDI GCAATG 4 cut(s) 17, 847, 973, 1234
BsrFI RCCGGY 1 cut(s) 795
BsrI ACTGG 1 cut(s) 483
BssAI RCCGGY 1 cut(s) 795
BssECI CCNNGG 5 cut(s) 45, 272, 732, 961, 1503
BssMI GATC 2 cut(s) 202, 880
BssT1I CCWWGG 5 cut(s) 45, 272, 732, 961, 1503
Bst2UI CCWGG 4 cut(s) 34, 1224, 1440, 1619
Bst4CI ACNGT 2 cut(s) 198, 1297
Bst6I CTCTTC 1 cut(s) 911
BstAPI GCANNNNNTGC 1 cut(s) 283
BstC8I GCNNGC 8 cut(s) 18, 22, 39, 94, 754, 1132, 1254, 1261
BstDEI CTNAG 4 cut(s) 26, 609, 660, 1088
BstDSI CCRYGG 3 cut(s) 45, 732, 961
BstEII GGTNACC 1 cut(s) 727
BstF5I GGATG 7 cut(s) 372, 597, 622, 789, 831, 1333, 1459
BstFNI CGCG 1 cut(s) 96
BstH2I RGCGCY 1 cut(s) 680
BstHHI GCGC 3 cut(s) 98, 679, 847
BstKTI GATC 2 cut(s) 205, 883
BstMAI GTCTC 6 cut(s) 166, 298, 709, 762, 1286, 1619
BstMBI GATC 2 cut(s) 202, 880
BstMWI GCNNNNNNNGC 6 cut(s) 47, 283, 518, 977, 1315, 1645
BstNI CCWGG 4 cut(s) 34, 1224, 1440, 1619
BstNSI RCATGY 2 cut(s) 756, 954
BstPI GGTNACC 1 cut(s) 727
BstSCI CCNGG 6 cut(s) 32, 467, 779, 1222, 1438, 1617
BstSFI CTRYAG 1 cut(s) 1383
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 5 cut(s) 505, 761, 1268, 1382, 1487
BstV2I GAAGAC 1 cut(s) 1505
BstXI CCANNNNNNTGG 1 cut(s) 574
BsuRI GGCC 2 cut(s) 50, 1043
BtgI CCRYGG 3 cut(s) 45, 732, 961
BtgZI GCGATG 1 cut(s) 1290
BtrI CACGTC 1 cut(s) 57
BtsCI GGATG 7 cut(s) 372, 597, 622, 789, 831, 1333, 1459
BtsI GCAGTG 1 cut(s) 1247
BtsIMutI CAGTG 2 cut(s) 490, 1247
Cac8I GCNNGC 8 cut(s) 18, 22, 39, 94, 754, 1132, 1254, 1261
CfoI GCGC 3 cut(s) 98, 679, 847
Cfr10I RCCGGY 1 cut(s) 795
Cfr13I GGNCC 3 cut(s) 49, 630, 1042
CseI GACGC 1 cut(s) 1452
Csp6I GTAC 3 cut(s) 1117, 1339, 1468
CspAI ACCGGT 1 cut(s) 795
CviQI GTAC 3 cut(s) 1117, 1339, 1468
DdeI CTNAG 4 cut(s) 26, 609, 660, 1088
DpnI GATC 2 cut(s) 204, 882
DpnII GATC 2 cut(s) 202, 880
Eam1104I CTCTTC 1 cut(s) 911
EarI CTCTTC 1 cut(s) 911
EciI GGCGGA 1 cut(s) 604
Ecl136II GAGCTC 1 cut(s) 30
Eco130I CCWWGG 5 cut(s) 45, 272, 732, 961, 1503
Eco24I GRGCYC 2 cut(s) 32, 1089
Eco31I GGTCTC 1 cut(s) 709
Eco32I GATATC 2 cut(s) 642, 1510
Eco47I GGWCC 1 cut(s) 630
Eco47III AGCGCT 1 cut(s) 678
Eco53kI GAGCTC 1 cut(s) 30
Eco91I GGTNACC 1 cut(s) 727
EcoICRI GAGCTC 1 cut(s) 30
EcoO65I GGTNACC 1 cut(s) 727
EcoRI GAATTC 2 cut(s) 445, 934
EcoRII CCWGG 4 cut(s) 32, 1222, 1438, 1617
EcoRV GATATC 2 cut(s) 642, 1510
EcoT14I CCWWGG 5 cut(s) 45, 272, 732, 961, 1503
EcoT22I ATGCAT 1 cut(s) 982
EcoT38I GRGCYC 2 cut(s) 32, 1089
ErhI CCWWGG 5 cut(s) 45, 272, 732, 961, 1503
Esp3I CGTCTC 3 cut(s) 762, 1286, 1619
FauI CCCGC 1 cut(s) 101
Fnu4HI GCNGC 7 cut(s) 156, 489, 519, 750, 1257, 1371, 1476
FokI GGATG 7 cut(s) 379, 604, 629, 776, 838, 1340, 1466
FriOI GRGCYC 2 cut(s) 32, 1089
Fsp4HI GCNGC 7 cut(s) 156, 489, 519, 750, 1257, 1371, 1476
FspBI CTAG 4 cut(s) 492, 1428, 1479, 1599
GlaI GCGC 3 cut(s) 97, 678, 846
GluI GCNGC 7 cut(s) 156, 489, 519, 750, 1257, 1371, 1476
GsaI CCCAGC 1 cut(s) 1585
GsuI CTGGAG 1 cut(s) 16
HaeII RGCGCY 1 cut(s) 680
HaeIII GGCC 2 cut(s) 50, 1043
HapII CCGG 6 cut(s) 468, 780, 796, 913, 1325, 1513
HgaI GACGC 1 cut(s) 1452
HhaI GCGC 3 cut(s) 98, 679, 847
Hin6I GCGC 3 cut(s) 96, 677, 845
HinP1I GCGC 3 cut(s) 96, 677, 845
HpaII CCGG 6 cut(s) 468, 780, 796, 913, 1325, 1513
HphI GGTGA 4 cut(s) 156, 185, 721, 748
Hpy166II GTNNAC 2 cut(s) 333, 630
Hpy188I TCNGA 4 cut(s) 1091, 1567, 1594, 1663
Hpy188III TCNNGA 4 cut(s) 704, 1355, 1513, 1533
Hpy8I GTNNAC 2 cut(s) 333, 630
Hpy99I CGWCG 3 cut(s) 271, 509, 725
HpyAV CCTTC 5 cut(s) 346, 1076, 1325, 1361, 1371
HpyCH4III ACNGT 2 cut(s) 198, 1297
HpyCH4IV ACGT 4 cut(s) 56, 771, 1466, 1628
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 283, 518, 977, 1315, 1645
HpyF3I CTNAG 4 cut(s) 26, 609, 660, 1088
HpySE526I ACGT 4 cut(s) 56, 771, 1466, 1628
HspAI GCGC 3 cut(s) 96, 677, 845
Kpn2I TCCGGA 1 cut(s) 1512
Kzo9I GATC 2 cut(s) 202, 880
LguI GCTCTTC 1 cut(s) 911
LmnI GCTCC 1 cut(s) 35
Lsp1109I GCAGC 5 cut(s) 505, 761, 1268, 1382, 1487
LweI GCATC 3 cut(s) 798, 901, 967
MaeI CTAG 4 cut(s) 492, 1428, 1479, 1599
MaeII ACGT 4 cut(s) 56, 771, 1466, 1628
MaeIII GTNAC 4 cut(s) 173, 251, 727, 1030
MalI GATC 2 cut(s) 204, 882
MboI GATC 2 cut(s) 202, 880
MboII GAAGA 4 cut(s) 220, 382, 928, 1510
MfeI CAATTG 1 cut(s) 1612
MhlI GDGCHC 2 cut(s) 32, 1089
MluCI AATT 6 cut(s) 445, 572, 934, 1203, 1459, 1612
MlyI GAGTC 3 cut(s) 1429, 1598, 1604
Mph1103I ATGCAT 1 cut(s) 982
MroI TCCGGA 1 cut(s) 1512
MseI TTAA 4 cut(s) 179, 1202, 1520, 1675
MslI CAYNNNNRTG 4 cut(s) 462, 734, 966, 1655
MspI CCGG 6 cut(s) 468, 780, 796, 913, 1325, 1513
MspR9I CCNGG 6 cut(s) 34, 469, 781, 1224, 1440, 1619
MunI CAATTG 1 cut(s) 1612
Mva1269I GAATGC 2 cut(s) 277, 1110
MvaI CCWGG 4 cut(s) 34, 1224, 1440, 1619
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 6 cut(s) 47, 283, 518, 977, 1315, 1645
NciI CCSGG 2 cut(s) 469, 781
NcoI CCATGG 3 cut(s) 45, 732, 961
NdeII GATC 2 cut(s) 202, 880
NmeAIII GCCGAG 2 cut(s) 114, 1451
NmuCI GTSAC 4 cut(s) 173, 251, 727, 1030
NsiI ATGCAT 1 cut(s) 982
NspI RCATGY 2 cut(s) 756, 954
OliI CACNNNNGTG 1 cut(s) 734
PaeI GCATGC 1 cut(s) 756
PciSI GCTCTTC 1 cut(s) 911
PctI GAATGC 2 cut(s) 277, 1110
PfeI GAWTC 8 cut(s) 454, 478, 700, 1122, 1219, 1529, 1562, 1568
PflFI GACNNNGTC 1 cut(s) 725
PflMI CCANNNNNTGG 1 cut(s) 1025
PfoI TCCNGGA 1 cut(s) 1438
PinAI ACCGGT 1 cut(s) 795
PkrI GCNGC 7 cut(s) 157, 490, 520, 751, 1258, 1372, 1477
PleI GAGTC 3 cut(s) 1429, 1597, 1603
PpsI GAGTC 3 cut(s) 1429, 1597, 1603
PshBI ATTAAT 1 cut(s) 1202
Psp124BI GAGCTC 1 cut(s) 32
Psp6I CCWGG 4 cut(s) 32, 1222, 1438, 1617
PspEI GGTNACC 1 cut(s) 727
PspFI CCCAGC 1 cut(s) 1581
PspGI CCWGG 4 cut(s) 32, 1222, 1438, 1617
PspPI GGNCC 3 cut(s) 49, 630, 1042
PstI CTGCAG 1 cut(s) 1387
PsyI GACNNNGTC 1 cut(s) 725
RsaI GTAC 3 cut(s) 1118, 1340, 1469
RsaNI GTAC 3 cut(s) 1117, 1339, 1468
RseI CAYNNNNRTG 4 cut(s) 462, 734, 966, 1655
SacI GAGCTC 1 cut(s) 32
SapI GCTCTTC 1 cut(s) 911
SaqAI TTAA 4 cut(s) 179, 1202, 1520, 1675
SatI GCNGC 7 cut(s) 156, 489, 519, 750, 1257, 1371, 1476
Sau3AI GATC 2 cut(s) 202, 880
Sau96I GGNCC 3 cut(s) 49, 630, 1042
SchI GAGTC 3 cut(s) 1429, 1598, 1604
ScrFI CCNGG 6 cut(s) 34, 469, 781, 1224, 1440, 1619
SduI GDGCHC 2 cut(s) 32, 1089
SfaNI GCATC 3 cut(s) 798, 901, 967
SfcI CTRYAG 1 cut(s) 1383
SinI GGWCC 1 cut(s) 630
SmiMI CAYNNNNRTG 4 cut(s) 462, 734, 966, 1655
SmlI CTYRAG 1 cut(s) 77
SmoI CTYRAG 1 cut(s) 77
SphI GCATGC 1 cut(s) 756
Sse9I AATT 6 cut(s) 445, 572, 934, 1203, 1459, 1612
SsiI CCGC 5 cut(s) 94, 156, 488, 589, 633
SspMI CTAG 4 cut(s) 492, 1428, 1479, 1599
SstI GAGCTC 1 cut(s) 32
StyD4I CCNGG 6 cut(s) 32, 467, 779, 1222, 1438, 1617
StyI CCWWGG 5 cut(s) 45, 272, 732, 961, 1503
TaaI ACNGT 2 cut(s) 198, 1297
TaiI ACGT 4 cut(s) 59, 774, 1469, 1631
TaqI TCGA 9 cut(s) 201, 318, 362, 381, 504, 668, 883, 1125, 1587
TasI AATT 6 cut(s) 445, 572, 934, 1203, 1459, 1612
TatI WGTACW 1 cut(s) 1116
TauI GCSGC 2 cut(s) 158, 491
TfiI GAWTC 8 cut(s) 454, 478, 700, 1122, 1219, 1529, 1562, 1568
Tru1I TTAA 4 cut(s) 179, 1202, 1520, 1675
Tru9I TTAA 4 cut(s) 179, 1202, 1520, 1675
TscAI CASTG 2 cut(s) 490, 1254
TseFI GTSAC 4 cut(s) 173, 251, 727, 1030
TseI GCWGC 5 cut(s) 518, 749, 1256, 1370, 1475
Tsp45I GTSAC 4 cut(s) 173, 251, 727, 1030
TspGWI ACGGA 3 cut(s) 137, 773, 1510
TspRI CASTG 2 cut(s) 490, 1254
Tth111I GACNNNGTC 1 cut(s) 725
Van91I CCANNNNNTGG 1 cut(s) 1025
VpaK11BI GGWCC 1 cut(s) 630
VspI ATTAAT 1 cut(s) 1202
XapI RAATTY 2 cut(s) 445, 934
XceI RCATGY 2 cut(s) 756, 954
XspI CTAG 4 cut(s) 492, 1428, 1479, 1599
Zsp2I ATGCAT 1 cut(s) 982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.