Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002434

Physical Location & Seq

Genomic Coordinates Reverse (-)

14899214 .. 14903766

Gene Structure 4553 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00093540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGAGGATTCTGAAGGGAGCGTCTTGAACTCACCGGTTGAAGAAAACTTGGGTGCTACTGATCACTTGTCAATTCTGAAAGGCTCTGGAGCATTTGGGATATTGGGTGCTGTTATTATTGCCCTACTTGTACCTCTGTTGCTGTCAACTGTGTTCCTGGGAAAGAAAAGGAAGCAACGAGGAGTTCCCGTGCAAGTTGGTGGTGAGGAAGGTTATGCAATGCGCAACATTCGTGTTACTGACTTGATTGAAACTCCTCATAAAGAGGCGACAACTGTGCCAGCCTTGTTTGAGCAATCTTGTGAAAAGTACGCACAGAATCAGTTTCTTGGAACCAGGAAGTTGATTGGAAGGGAATTTGTCACAGCTAGCAATGGCAAGAAGTTTGAGAAACTTCACTTAGGAGATTATGAATGGCAAACTTACAGACAAGTCTTTGATCGTGCTTGCAACTTTGCATCTGGCCTTATTAAGTTGGGTCATAATGTGGATACCCGTGCTGCAATTTTTGCTGACACCTGCGCGGAGTGGTTTATAACCTTTCAGGGGTGCTTCCGGCAGAATATTACTGTTGTTACGATCTATTCTTCCCTAGGTGAGGATGCCCTAATCCACTCGCTTAATGAGACTCAAGTATCAACATTGATCTGTGATTCAAAGCAGTTGAAAAAGCTGGCTTCCATAAGCTCAAGGCTAAATAGCATAAAAAATGTAATTTATTTTGAAGACGAGGGAAGTTCAGATGCTAAAGAATTTGAAAGTACTACCAATTGGACAGTCAGATCCATTTCTGAAGTTGAGAAACTTGGACAAGAAAATTCTGTTCATCCACGTTTACCTTCTAAGAATGACATTGCTGTTATCATGTATACGAGCGGCAGTACAGGTCTACCAAAGGGGGTCATGATAACTCATGGCAATATTGTAGCCACTACGGCAGCTGTTACGACACTGATTCCAAATCTGGGTAGCACTGATGCATACTTAGCATACTTGCCCTTAGCTCATGTTTTTGAATTGGCCGCGGAGTCTGTGATGATGGCTTCAGGTGTTAAAGTTGGTTATGGTTCAGCATTGACTTTAACAGACACTTCAAATAAAATTAAGAAAGGAACCAAGGGAGATGTTTCTATGTTAAGGCCGACTCTCATGACTACAGTTCCTGCTATTATAGATCGTATTCGTGATGCAGTTTTTAAAAAGGTAGAAGTGGATGTGAATCACCTTGCCTATGATGTTATTGCACGAGAAAGGGGGATAGCGAAGAACCTTTTTGACATTGGATTTAAACGGCGACTGGCTGCTGTTGAAGGAAGCTGGTTTGGTGCTTGGGGTCTGGAAAAATTGTTTTGGGATAATTTTGTCTTTAAAGTTATACGTCTAGGGCTGGGAGGGCGCATTCGCTTTATGATCTGTGGTGGAGCTCCTTTATCTGCTGATTCACAACGATTCATCAATATCTGCATGGGTGCTCCAATCGGGCAAGCATATGGCTTGACAGAAACATTTGCTGGAGCTACGTTTTCTGAGTGGGATGACACAGCAGTGGGCCGTGTTGGCCCACCGTTGCCTTGTTGCTACGTTAAGCTTGTTTCTTGGAAAGAAGGTGGATACTTGGCATCTGACAAGCCAATACCTCGTGGGGAGATTGTAATTGGGGGACCCTGTGTAACTGCTGGGTACTTTAAGAATCAAGAAAAGACTGACGAGGTCTACAAGGTGAGTTTTCTAACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

578

Amino Acids

63.16

Weight (kDa)

7.53

Isoelectric Point (pI)

24.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	130 - 562	1.1e-86	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04350 AT2G04350
fragaria_vesca	FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470
malus_domestica	MD09G1129700.v1.1 MD17G1118500.v1.1
prunus_persica	Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1
pyrus_communis	pycom09g05270 pycom17g10890
rosa_chinensis	RchiOBHm_Chr2g0155701 RchiOBHm_Chr2g0155721
rosa_laevigata	RLG00000020855 RLG00000020857 RLG00000020858
rosa_multiflora	Rmu_co8272995.1_g000001 Rmu_co8427559.1_g000001 Rmu_sc0002712.1_g000001 Rmu_sc0011953.1_g000003 Rmu_sc0011953.1_g000015
rosa_roxburghii	Rroxscaffold_2G00093540
rosa_rugosa	Rorug02G0449500
rosa_samantha	Rh2AG515400 Rh2AG515500 Rh2BG526400 Rh2BG526500 Rh2CG500300 Rh2CG500500 Rh2DG535300 Rh2DG535500
rosa_wichuraiana	Rw2G042360 Rw2G042370 Rw2G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	536
AarI	CACCTGC	1 cut(s)	527
Acc16I	TGCGCA	1 cut(s)	224
Acc36I	ACCTGC	1 cut(s)	527
AccBSI	CCGCTC	1 cut(s)	876
AccI	GTMKAC	3 cut(s)	869, 889, 1713
AccII	CGCG	2 cut(s)	524, 1025
AciI	CCGC	4 cut(s)	524, 876, 1023, 1025
AclWI	GGATC	1 cut(s)	777
AcoI	YGGCCR	1 cut(s)	1020
AcsI	RAATTY	3 cut(s)	356, 752, 817
AcuI	CTGAAG	3 cut(s)	33, 813, 1029
AfaI	GTAC	5 cut(s)	132, 311, 763, 883, 1682
AfiI	CCNNNNNNNGG	3 cut(s)	546, 598, 965
AgeI	ACCGGT	1 cut(s)	34
AjnI	CCWGG	2 cut(s)	156, 335
AleI	CACNNNNGTG	1 cut(s)	1544
AluBI	AGCT	9 cut(s)	368, 673, 687, 941, 1004, 1317, 1424, 1517, 1588
AluI	AGCT	9 cut(s)	368, 673, 687, 941, 1004, 1317, 1424, 1517, 1588
Alw21I	GWGCWC	2 cut(s)	1426, 1474
Alw26I	GTCTC	1 cut(s)	620
AlwI	GGATC	1 cut(s)	777
AlwNI	CAGNNNCTG	1 cut(s)	1163
AoxI	GGCC	5 cut(s)	463, 1020, 1139, 1549, 1558
ApeKI	GCWGC	3 cut(s)	500, 938, 1301
ApoI	RAATTY	3 cut(s)	356, 752, 817
AsiGI	ACCGGT	1 cut(s)	34
AspA2I	CCTAGG	1 cut(s)	592
AspLEI	GCGC	3 cut(s)	225, 524, 1398
AspS9I	GGNCC	3 cut(s)	1549, 1559, 1661
AsuHPI	GGTGA	5 cut(s)	24, 215, 608, 1214, 1732
AsuNHI	GCTAGC	1 cut(s)	368
AvaII	GGWCC	1 cut(s)	1661
AvrII	CCTAGG	1 cut(s)	592
BaeI	ACNNNNGTAYC	2 cut(s)	618, 651
BanII	GRGCYC	1 cut(s)	1426
BauI	CACGAG	2 cut(s)	1245, 1638
BbsI	GAAGAC	1 cut(s)	732
Bbv12I	GWGCWC	2 cut(s)	1426, 1474
BbvI	GCAGC	3 cut(s)	487, 950, 1288
BccI	CCATC	1 cut(s)	1033
BceAI	ACGGC	3 cut(s)	951, 1307, 1536
BcgI	CGANNNNNNTGC	2 cut(s)	259, 293
BciT130I	CCWGG	2 cut(s)	158, 337
BciVI	GTATCC	2 cut(s)	484, 1604
BclI	TGATCA	1 cut(s)	61
BcoDI	GTCTC	1 cut(s)	620
BfaI	CTAG	3 cut(s)	369, 593, 1382
BfmI	CTRYAG	1 cut(s)	1155
BfuAI	ACCTGC	1 cut(s)	527
BfuI	GTATCC	2 cut(s)	484, 1604
BglI	GCCNNNNNGGC	2 cut(s)	935, 1557
BisI	GCNGC	5 cut(s)	501, 877, 939, 1023, 1302
BlnI	CCTAGG	1 cut(s)	592
BlsI	GCNGC	5 cut(s)	502, 878, 940, 1024, 1303
BmcAI	AGTACT	1 cut(s)	763
Bme1390I	CCNGG	2 cut(s)	158, 337
Bme18I	GGWCC	1 cut(s)	1661
BmgT120I	GGNCC	3 cut(s)	1549, 1559, 1661
BmiI	GGNNCC	4 cut(s)	334, 1114, 1662, 1663
BmrFI	CCNGG	2 cut(s)	158, 337
BmsI	GCATC	6 cut(s)	467, 592, 733, 967, 1177, 1628
BmtI	GCTAGC	1 cut(s)	372
BpiI	GAAGAC	1 cut(s)	732
BpmI	CTGGAG	2 cut(s)	108, 1533
Bpu10I	CCTNAGC	1 cut(s)	1000
BpuEI	CTTGAG	2 cut(s)	615, 673
BsaBI	GATNNNNATC	1 cut(s)	1218
BsaJI	CCNNGG	4 cut(s)	157, 592, 1023, 1116
BsaWI	WCCGGW	1 cut(s)	34
BsaXI	ACNNNNNCTCC	2 cut(s)	174, 204
Bsc4I	CCNNNNNNNGG	3 cut(s)	546, 598, 965
Bse118I	RCCGGY	1 cut(s)	34
Bse1I	ACTGG	1 cut(s)	1302
Bse3DI	GCAATG	3 cut(s)	225, 379, 852
Bse8I	GATNNNNATC	1 cut(s)	1218
BseBI	CCWGG	2 cut(s)	158, 337
BseDI	CCNNGG	4 cut(s)	157, 592, 1023, 1116
BseGI	GGATG	4 cut(s)	607, 826, 1219, 1540
BseJI	GATNNNNATC	1 cut(s)	1218
BseLI	CCNNNNNNNGG	3 cut(s)	546, 598, 965
BseMI	GCAATG	3 cut(s)	225, 379, 852
BseMII	CTCAG	1 cut(s)	1518
BseNI	ACTGG	1 cut(s)	1302
BseRI	GAGGAG	2 cut(s)	195, 246
BseXI	GCAGC	3 cut(s)	487, 950, 1288
BseYI	CCCAGC	2 cut(s)	1387, 1676
Bsh1236I	CGCG	2 cut(s)	524, 1025
BshFI	GGCC	5 cut(s)	465, 1022, 1141, 1551, 1560
BshTI	ACCGGT	1 cut(s)	34
BsiHKAI	GWGCWC	2 cut(s)	1426, 1474
BsiSI	CCGG	2 cut(s)	35, 556
BslFI	GGGAC	1 cut(s)	1674
BslI	CCNNNNNNNGG	3 cut(s)	546, 598, 965
BsmAI	GTCTC	1 cut(s)	620
BsmFI	GGGAC	1 cut(s)	1674
BsmI	GAATGC	1 cut(s)	1398
BsnI	GGCC	5 cut(s)	465, 1022, 1141, 1551, 1560
Bsp1286I	GDGCHC	2 cut(s)	1426, 1474
Bsp143I	GATC	7 cut(s)	61, 439, 579, 645, 782, 1174, 1410
BspACI	CCGC	4 cut(s)	524, 876, 1023, 1025
BspANI	GGCC	5 cut(s)	465, 1022, 1141, 1551, 1560
BspCNI	CTCAG	1 cut(s)	1519
BspFNI	CGCG	2 cut(s)	524, 1025
BspHI	TCATGA	2 cut(s)	903, 1149
BspLI	GGNNCC	4 cut(s)	334, 1114, 1662, 1663
BspMI	ACCTGC	1 cut(s)	527
BspOI	GCTAGC	1 cut(s)	372
BspPI	GGATC	1 cut(s)	777
BsrBI	CCGCTC	1 cut(s)	876
BsrDI	GCAATG	3 cut(s)	225, 379, 852
BsrFI	RCCGGY	1 cut(s)	34
BsrI	ACTGG	1 cut(s)	1302
BssAI	RCCGGY	1 cut(s)	34
BssECI	CCNNGG	4 cut(s)	157, 592, 1023, 1116
BssMI	GATC	7 cut(s)	61, 439, 579, 645, 782, 1174, 1410
BssNAI	GTATAC	1 cut(s)	870
BssSI	CACGAG	2 cut(s)	1245, 1638
BssT1I	CCWWGG	2 cut(s)	592, 1116
Bst1107I	GTATAC	1 cut(s)	870
Bst2BI	CACGAG	2 cut(s)	1245, 1638
Bst2UI	CCWGG	2 cut(s)	158, 337
Bst4CI	ACNGT	6 cut(s)	151, 277, 571, 778, 1159, 1566
BstAPI	GCANNNNNTGC	1 cut(s)	509
BstC8I	GCNNGC	5 cut(s)	282, 370, 448, 675, 1485
BstDEI	CTNAG	6 cut(s)	400, 843, 985, 1000, 1527, 1734
BstDSI	CCRYGG	1 cut(s)	1023
BstENI	CCTNNNNNAGG	1 cut(s)	596
BstF5I	GGATG	4 cut(s)	607, 826, 1219, 1540
BstFNI	CGCG	2 cut(s)	524, 1025
BstHHI	GCGC	3 cut(s)	225, 524, 1398
BstKTI	GATC	7 cut(s)	64, 442, 582, 648, 785, 1177, 1413
BstMAI	GTCTC	1 cut(s)	620
BstMBI	GATC	7 cut(s)	61, 439, 579, 645, 782, 1174, 1410
BstMWI	GCNNNNNNNGC	5 cut(s)	509, 935, 986, 1393, 1557
BstNI	CCWGG	2 cut(s)	158, 337
BstSCI	CCNGG	2 cut(s)	156, 335
BstSFI	CTRYAG	1 cut(s)	1155
BstUI	CGCG	2 cut(s)	524, 1025
BstV1I	GCAGC	3 cut(s)	487, 950, 1288
BstV2I	GAAGAC	1 cut(s)	732
BstX2I	RGATCY	1 cut(s)	782
BstYI	RGATCY	1 cut(s)	782
BstZ17I	GTATAC	1 cut(s)	870
BsuI	GTATCC	2 cut(s)	484, 1604
BsuRI	GGCC	5 cut(s)	465, 1022, 1141, 1551, 1560
BtgI	CCRYGG	1 cut(s)	1023
BtsCI	GGATG	4 cut(s)	607, 826, 1219, 1540
BtsI	GCAGTG	1 cut(s)	1551
BtsIMutI	CAGTG	3 cut(s)	950, 972, 1551
BveI	ACCTGC	1 cut(s)	527
Cac8I	GCNNGC	5 cut(s)	282, 370, 448, 675, 1485
CaiI	CAGNNNCTG	1 cut(s)	1163
CciI	TCATGA	2 cut(s)	903, 1149
CfoI	GCGC	3 cut(s)	225, 524, 1398
Cfr10I	RCCGGY	1 cut(s)	34
Cfr13I	GGNCC	3 cut(s)	1549, 1559, 1661
Cfr42I	CCGCGG	1 cut(s)	1026
CseI	GACGC	1 cut(s)	10
Csp6I	GTAC	5 cut(s)	131, 310, 762, 882, 1681
CspAI	ACCGGT	1 cut(s)	34
CviAII	CATG	6 cut(s)	865, 904, 914, 1007, 1150, 1465
CviQI	GTAC	5 cut(s)	131, 310, 762, 882, 1681
DdeI	CTNAG	6 cut(s)	400, 843, 985, 1000, 1527, 1734
DpnI	GATC	7 cut(s)	63, 441, 581, 647, 784, 1176, 1412
DpnII	GATC	7 cut(s)	61, 439, 579, 645, 782, 1174, 1410
DraI	TTTAAA	3 cut(s)	1198, 1288, 1369
EaeI	YGGCCR	1 cut(s)	1020
Ecl136II	GAGCTC	1 cut(s)	1424
Eco130I	CCWWGG	2 cut(s)	592, 1116
Eco24I	GRGCYC	1 cut(s)	1426
Eco47I	GGWCC	1 cut(s)	1661
Eco53kI	GAGCTC	1 cut(s)	1424
Eco57I	CTGAAG	3 cut(s)	33, 813, 1029
EcoICRI	GAGCTC	1 cut(s)	1424
EcoNI	CCTNNNNNAGG	1 cut(s)	596
EcoO109I	RGGNCCY	1 cut(s)	1661
EcoRII	CCWGG	2 cut(s)	156, 335
EcoT14I	CCWWGG	2 cut(s)	592, 1116
EcoT22I	ATGCAT	1 cut(s)	982
EcoT38I	GRGCYC	1 cut(s)	1426
ErhI	CCWWGG	2 cut(s)	592, 1116
FaeI	CATG	6 cut(s)	868, 907, 917, 1010, 1153, 1468
FaqI	GGGAC	1 cut(s)	1674
FatI	CATG	6 cut(s)	864, 903, 913, 1006, 1149, 1464
FauNDI	CATATG	1 cut(s)	1489
FbaI	TGATCA	1 cut(s)	61
FblI	GTMKAC	3 cut(s)	869, 889, 1713
Fnu4HI	GCNGC	5 cut(s)	501, 877, 939, 1023, 1302
FokI	GGATG	4 cut(s)	614, 813, 1226, 1547
FriOI	GRGCYC	1 cut(s)	1426
Fsp4HI	GCNGC	5 cut(s)	501, 877, 939, 1023, 1302
FspBI	CTAG	3 cut(s)	369, 593, 1382
FspI	TGCGCA	1 cut(s)	224
GlaI	GCGC	3 cut(s)	224, 523, 1397
GluI	GCNGC	5 cut(s)	501, 877, 939, 1023, 1302
GsaI	CCCAGC	2 cut(s)	1391, 1680
GsuI	CTGGAG	2 cut(s)	108, 1533
HaeIII	GGCC	5 cut(s)	465, 1022, 1141, 1551, 1560
HapII	CCGG	2 cut(s)	35, 556
HgaI	GACGC	1 cut(s)	10
HhaI	GCGC	3 cut(s)	225, 524, 1398
Hin1II	CATG	6 cut(s)	868, 907, 917, 1010, 1153, 1468
Hin6I	GCGC	3 cut(s)	223, 522, 1396
HinP1I	GCGC	3 cut(s)	223, 522, 1396
HincII	GTYRAC	1 cut(s)	147
HindII	GTYRAC	1 cut(s)	147
HindIII	AAGCTT	1 cut(s)	1586
HpaII	CCGG	2 cut(s)	35, 556
HphI	GGTGA	5 cut(s)	24, 215, 608, 1214, 1732
Hpy166II	GTNNAC	5 cut(s)	147, 836, 870, 890, 1714
Hpy188I	TCNGA	7 cut(s)	13, 78, 742, 782, 793, 1528, 1624
Hpy188III	TCNNGA	7 cut(s)	25, 87, 904, 1150, 1184, 1337, 1694
Hpy8I	GTNNAC	5 cut(s)	147, 836, 870, 890, 1714
HpyAV	CCTTC	6 cut(s)	8, 203, 345, 849, 1304, 1598
HpyCH4III	ACNGT	6 cut(s)	151, 277, 571, 778, 1159, 1566
HpyCH4IV	ACGT	4 cut(s)	832, 1378, 1520, 1581
HpyCH4V	TGCA	9 cut(s)	193, 218, 450, 458, 503, 980, 1190, 1244, 1464
HpyF10VI	GCNNNNNNNGC	5 cut(s)	509, 935, 986, 1393, 1557
HpyF3I	CTNAG	6 cut(s)	400, 843, 985, 1000, 1527, 1734
HpySE526I	ACGT	4 cut(s)	832, 1378, 1520, 1581
Hsp92II	CATG	6 cut(s)	868, 907, 917, 1010, 1153, 1468
HspAI	GCGC	3 cut(s)	223, 522, 1396
KflI	GGGWCCC	1 cut(s)	1661
Ksp22I	TGATCA	1 cut(s)	61
KspI	CCGCGG	1 cut(s)	1026
Kzo9I	GATC	7 cut(s)	61, 439, 579, 645, 782, 1174, 1410
LmnI	GCTCC	6 cut(s)	18, 89, 1421, 1429, 1477, 1514
Lsp1109I	GCAGC	3 cut(s)	487, 950, 1288
LweI	GCATC	6 cut(s)	467, 592, 733, 967, 1177, 1628
MaeI	CTAG	3 cut(s)	369, 593, 1382
MaeII	ACGT	4 cut(s)	832, 1378, 1520, 1581
MaeIII	GTNAC	5 cut(s)	235, 361, 574, 943, 1669
MalI	GATC	7 cut(s)	63, 441, 581, 647, 784, 1176, 1412
MbiI	CCGCTC	1 cut(s)	876
MboI	GATC	7 cut(s)	61, 439, 579, 645, 782, 1174, 1410
MboII	GAAGA	4 cut(s)	53, 579, 737, 1276
MfeI	CAATTG	1 cut(s)	769
MflI	RGATCY	1 cut(s)	782
MhlI	GDGCHC	2 cut(s)	1426, 1474
MlyI	GAGTC	3 cut(s)	622, 1037, 1138
Mph1103I	ATGCAT	1 cut(s)	982
MslI	CAYNNNNRTG	1 cut(s)	1544
MspA1I	CMGCKG	2 cut(s)	941, 1025
MspI	CCGG	2 cut(s)	35, 556
MspR9I	CCNGG	2 cut(s)	158, 337
MunI	CAATTG	1 cut(s)	769
Mva1269I	GAATGC	1 cut(s)	1398
MvaI	CCWGG	2 cut(s)	158, 337
MvnI	CGCG	2 cut(s)	524, 1025
MwoI	GCNNNNNNNGC	5 cut(s)	509, 935, 986, 1393, 1557
NdeI	CATATG	1 cut(s)	1489
NdeII	GATC	7 cut(s)	61, 439, 579, 645, 782, 1174, 1410
NheI	GCTAGC	1 cut(s)	368
NlaIII	CATG	6 cut(s)	868, 907, 917, 1010, 1153, 1468
NlaIV	GGNNCC	4 cut(s)	334, 1114, 1662, 1663
NmuCI	GTSAC	1 cut(s)	361
NsbI	TGCGCA	1 cut(s)	224
NsiI	ATGCAT	1 cut(s)	982
OliI	CACNNNNGTG	1 cut(s)	1544
PagI	TCATGA	2 cut(s)	903, 1149
PaqCI	CACCTGC	1 cut(s)	527
PctI	GAATGC	1 cut(s)	1398
PfeI	GAWTC	8 cut(s)	8, 319, 653, 955, 1219, 1439, 1449, 1690
PflFI	GACNNNGTC	1 cut(s)	1709
PinAI	ACCGGT	1 cut(s)	34
PkrI	GCNGC	5 cut(s)	502, 878, 940, 1024, 1303
PleI	GAGTC	3 cut(s)	622, 1036, 1138
PpsI	GAGTC	3 cut(s)	622, 1036, 1138
PpuMI	RGGWCCY	1 cut(s)	1661
PsiI	TTATAA	1 cut(s)	536
Psp124BI	GAGCTC	1 cut(s)	1426
Psp5II	RGGWCCY	1 cut(s)	1661
Psp6I	CCWGG	2 cut(s)	156, 335
PspFI	CCCAGC	2 cut(s)	1387, 1676
PspGI	CCWGG	2 cut(s)	156, 335
PspN4I	GGNNCC	4 cut(s)	334, 1114, 1662, 1663
PspPI	GGNCC	3 cut(s)	1549, 1559, 1661
PspPPI	RGGWCCY	1 cut(s)	1661
PstNI	CAGNNNCTG	1 cut(s)	1163
PsuI	RGATCY	1 cut(s)	782
PsyI	GACNNNGTC	1 cut(s)	1709
PvuII	CAGCTG	1 cut(s)	941
RsaI	GTAC	5 cut(s)	132, 311, 763, 883, 1682
RsaNI	GTAC	5 cut(s)	131, 310, 762, 882, 1681
RseI	CAYNNNNRTG	1 cut(s)	1544
SacI	GAGCTC	1 cut(s)	1426
SacII	CCGCGG	1 cut(s)	1026
SatI	GCNGC	5 cut(s)	501, 877, 939, 1023, 1302
Sau3AI	GATC	7 cut(s)	61, 439, 579, 645, 782, 1174, 1410
Sau96I	GGNCC	3 cut(s)	1549, 1559, 1661
ScaI	AGTACT	1 cut(s)	763
SchI	GAGTC	3 cut(s)	622, 1037, 1138
ScrFI	CCNGG	2 cut(s)	158, 337
SduI	GDGCHC	2 cut(s)	1426, 1474
SfaNI	GCATC	6 cut(s)	467, 592, 733, 967, 1177, 1628
SfcI	CTRYAG	1 cut(s)	1155
SfiI	GGCCNNNNNGGCC	1 cut(s)	1557
Sfr303I	CCGCGG	1 cut(s)	1026
SgrBI	CCGCGG	1 cut(s)	1026
SinI	GGWCC	1 cut(s)	1661
SmiMI	CAYNNNNRTG	1 cut(s)	1544
SmlI	CTYRAG	2 cut(s)	630, 688
SmoI	CTYRAG	2 cut(s)	630, 688
SsiI	CCGC	4 cut(s)	524, 876, 1023, 1025
SspI	AATATT	2 cut(s)	565, 922
SspMI	CTAG	3 cut(s)	369, 593, 1382
SstI	GAGCTC	1 cut(s)	1426
StyD4I	CCNGG	2 cut(s)	156, 335
StyI	CCWWGG	2 cut(s)	592, 1116
TaaI	ACNGT	6 cut(s)	151, 277, 571, 778, 1159, 1566
TaiI	ACGT	4 cut(s)	835, 1381, 1523, 1584
TatI	WGTACW	2 cut(s)	761, 881
TauI	GCSGC	2 cut(s)	879, 1025
TfiI	GAWTC	8 cut(s)	8, 319, 653, 955, 1219, 1439, 1449, 1690
TscAI	CASTG	3 cut(s)	957, 979, 1551
TseFI	GTSAC	1 cut(s)	361
TseI	GCWGC	3 cut(s)	500, 938, 1301
Tsp45I	GTSAC	1 cut(s)	361
TspDTI	ATGAA	3 cut(s)	426, 815, 1441
TspRI	CASTG	3 cut(s)	957, 979, 1551
Tth111I	GACNNNGTC	1 cut(s)	1709
VpaK11BI	GGWCC	1 cut(s)	1661
XagI	CCTNNNNNAGG	1 cut(s)	596
XapI	RAATTY	3 cut(s)	356, 752, 817
XmaJI	CCTAGG	1 cut(s)	592
XmiI	GTMKAC	3 cut(s)	869, 889, 1713
XspI	CTAG	3 cut(s)	369, 593, 1382
ZrmI	AGTACT	1 cut(s)	763
Zsp2I	ATGCAT	1 cut(s)	982

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.